Citrus Sinensis ID: 007233
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMX4 | 613 | Probable inactive purple | yes | no | 1.0 | 0.998 | 0.773 | 0.0 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.985 | 0.986 | 0.687 | 0.0 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.964 | 0.959 | 0.663 | 0.0 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.570 | 0.948 | 0.696 | 1e-150 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.812 | 0.757 | 0.300 | 7e-55 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.818 | 0.769 | 0.307 | 4e-53 | |
| Q8BX37 | 438 | Iron/zinc purple acid pho | no | no | 0.591 | 0.826 | 0.280 | 3e-26 | |
| Q6ZNF0 | 438 | Iron/zinc purple acid pho | yes | no | 0.516 | 0.721 | 0.279 | 8e-26 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.558 | 0.782 | 0.253 | 1e-22 | |
| A5D6U8 | 443 | Iron/zinc purple acid pho | yes | no | 0.588 | 0.812 | 0.271 | 2e-22 |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/613 (77%), Positives = 525/613 (85%), Gaps = 1/613 (0%)
Query: 1 MRE-LRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 59
MRE L I ++ VLG SH PLS IA+ K T+ LN+ AYVKASP V+G GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSP 119
+SE V V+YSSP PS DDWI VFSP++F+ASTC +N V PP LCSAP+K+QYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 179
+Y TG GSLKL LINQRSDFS ALFSGGLL PKLVA+SNK+AF NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AE V+WG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 299
IHT+FLKELWPN+ YTY+VGHRL N IWS EYQFK+SP+PGQNS+Q+VVIFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYNDFQ ASLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY DSGGECGV AETMFYVPA+NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 479
VADTEHDWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 539
RESLQKLWQKYKVDIAIYGH HNYERTCP+YQ++CT+ EK+ YK LNGTIH+VAGGGGA
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 540 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 599
GLAEF+ LQ WSL+RDYDYGF+KLTA DHSNLLFEYKKSSDG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 600 CTVGSCPSTTLAS 612
C V SCP+TTLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/608 (68%), Positives = 485/608 (79%), Gaps = 5/608 (0%)
Query: 9 FGILLVLGTFQVASSH----GGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWV 64
F ++L+ QV+SSH G LS+I I A + +A++ SP V+G +GQ++EWV
Sbjct: 5 FLLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWV 64
Query: 65 TVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 124
V S+P PS DDW+ VFSP+ F +S+C+ + P +CSAP+KY YA SSP Y T
Sbjct: 65 NVVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKT 123
Query: 125 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMT 184
G LK MLINQR+DFS ALF+GGL P LV+VSN ++F NP APVYPRLA GK W+EMT
Sbjct: 124 GNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMT 183
Query: 185 VTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244
VTWTSGY I EA FV+W RKG SPAGTLTF R SMCGAPARTVGWRDPG+IHT+
Sbjct: 184 VTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTAS 243
Query: 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSN 304
LK+LWPN YTY++GH L N + +WS + FK+SPYPGQ+SLQRV+IFGDMGK E DGSN
Sbjct: 244 LKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSN 303
Query: 305 EYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364
EYND+Q SLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+
Sbjct: 304 EYNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMV 363
Query: 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE 424
ASGNHERDWP +GSFYG KDSGGECGV AETMF PAEN+AKFWYS DYGMFRFCVADTE
Sbjct: 364 ASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTE 423
Query: 425 HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 484
HDWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS+ +Y +GSF EPMGRESLQ
Sbjct: 424 HDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQ 483
Query: 485 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEF 544
KLWQKYKVDIA YGHVHNYERTCPIYQN C + EK++Y G GTIHVV GG G+ L+ F
Sbjct: 484 KLWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSF 543
Query: 545 TPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGS 604
+ L+ WS++RDYDYGFVKLTAFDHS+LLFEYKKSS+G V+DSF I R+YRD+LAC S
Sbjct: 544 SSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDS 603
Query: 605 CPSTTLAS 612
C TTLAS
Sbjct: 604 CEPTTLAS 611
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/592 (66%), Positives = 465/592 (78%), Gaps = 2/592 (0%)
Query: 21 ASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIA 80
A+ G L++I + + + AL+ + + ASP V+G +G+++EWV + S+P P+ DDWI
Sbjct: 24 ANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIG 83
Query: 81 VFSPSNFSASTC-SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSD 139
VFSP+ F + C P +CS+PIKY Y N S P Y +G +LK +INQR+D
Sbjct: 84 VFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRAD 142
Query: 140 FSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAF 199
S ALFS G+ +P L+ VSN +AF NP APVYPRLA GK W+EMTVTWTSGY I+EA F
Sbjct: 143 VSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPF 202
Query: 200 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVG 259
++W KG SPAGTLTF+R SMCG PAR VGWRDPG+ HTSFLKELWPN Y Y++G
Sbjct: 203 IEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLG 262
Query: 260 HRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQ 319
H L N + IWS Y F +SPYPGQ+S QRV+IFGDMGK E DGSNEYND+Q SLNTT Q
Sbjct: 263 HDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQ 322
Query: 320 LIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 379
+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSF
Sbjct: 323 VIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSF 382
Query: 380 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 439
Y DSGGECGV AETMFY PAENRAKFWY TDYGMFRFCVAD+EHDWREGTEQYKFIE+
Sbjct: 383 YAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIEN 442
Query: 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 499
CLA+VDR+ QPWLIF+AHRVLGYS+ +Y +G+F EPMGRESLQKLWQKYKVD+A YGH
Sbjct: 443 CLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGH 502
Query: 500 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 559
VHNYERTCPIY++ C N +K++Y GT GTIHVV GG G+ L+ F+ L WSL RDYD+
Sbjct: 503 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 562
Query: 560 GFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLA 611
GFVKLTA DHS+LLFEYKKSS G+VYDSF ISRDYRD+LACT SC TT A
Sbjct: 563 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 243/349 (69%), Positives = 287/349 (82%)
Query: 264 NSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD 323
+ + +W+ Y F+A P PGQNSLQR+++FGDMGK E DGSNE+ ++Q SLNTT +LI+D
Sbjct: 20 DGSVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 79
Query: 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNK 383
L N DIVFHIGD+ YANGY+SQWDQFTAQ+ PI++ PYM+ASGNHERDWP TG F+ K
Sbjct: 80 LDNYDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVK 139
Query: 384 DSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443
DSGGECGV AETM+Y PAENRA FWY DYGMFRFCV D+EHDWREGT QYKFIE CL++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503
VDR+ QPWLIF AHRVLGYSS +YA GSF EP GRESLQKLWQ+Y+VDIA +GHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 504 ERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVK 563
ERTCP+YQ+ C N +K +Y GT+NGTI VVAGGGG+ L+ +T WS++RD+DYGF K
Sbjct: 260 ERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTK 319
Query: 564 LTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLAS 612
LTAF+HS+LLFEY KSSDGKVYDSF I RDYRD+L+C SC TTLAS
Sbjct: 320 LTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 186/619 (30%), Positives = 290/619 (46%), Gaps = 122/619 (19%)
Query: 33 AIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTC 92
A KAT +++ NA ++ +VV +W V+ +PS DW+ ++SP
Sbjct: 20 ADSKATISISPNALNRSGDSVV------IQWSGVD----SPSDLDWLGLYSP-------- 61
Query: 93 SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLL 150
E+P+ I Y++ N SS G G S+ L L N RS+++ +F S +
Sbjct: 62 -PESPN-------DHFIGYKFLNESSTWKDGFG--SISLPLTNLRSNYTFRIFRWSESEI 111
Query: 151 KPK--------------LVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 195
PK L+A S ++ F + P L+ N M V + +G G
Sbjct: 112 DPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG--- 168
Query: 196 AEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAM 253
E FV++G +S A + ++R MC +PA T+GWRDPG+I + +K L
Sbjct: 169 EERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVR 228
Query: 254 YTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---Q 310
Y Y+VG + + WS + + A + ++ +FGDMG + Y F Q
Sbjct: 229 YYYQVG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMG-----CATPYTTFIRTQ 277
Query: 311 YASLNTTRQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366
S++T + +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY +
Sbjct: 278 DESISTVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCI 337
Query: 367 GNHERDWPG-------TGSFYGNKDSGGECGVLAETMFYVPAENRA----------KFWY 409
GNHE D+ S YGN D GGECGV F +P + +Y
Sbjct: 338 GNHEYDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYY 396
Query: 410 STDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 469
S D G F TE ++ +G QY+FI+ L SVDR+K P+++ HR + Y
Sbjct: 397 SYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPM-------YT 449
Query: 470 VDGSFAEPMGR----ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525
+ M R E L+ L+ K V +A++GHVH YER CPI N C + ++G
Sbjct: 450 TSNEVRDTMIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPISNNTCGTQ----WQGN 505
Query: 526 LNGTIHVVAGGGGAGLAEFTPL--------------QTTWSLYRDYDYGFVKLTAFDHSN 571
+H+V G G ++ P+ Q S+YR ++G+ +L A +
Sbjct: 506 ---PVHLVIGMAG---QDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVA-NKEK 558
Query: 572 LLFEYKKSSDGKVYDSFRI 590
L + + DG+V+D+ +
Sbjct: 559 LTVSFVGNHDGEVHDTVEM 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 275/601 (45%), Gaps = 100/601 (16%)
Query: 45 AYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPL 103
A + SP + G + V +++S +PS DW+ ++SP P
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSP----------------PDS 62
Query: 104 LCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK-------- 153
I Y++ + SP ++ +G GS+ L L N RS+++ +F + + PK
Sbjct: 63 PHDHFIGYKFLS-DSPTWQ-SGSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 154 ------LVAVSNKIAFT-NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKG 206
L+ SN++ F N P L+ NEM V + +G G E EA +
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EEREARYGEVKDK 179
Query: 207 GDRTHSPAGTLTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS 265
D G + ++ MC APA TVGWRDPG+ + +K L Y Y+VG L
Sbjct: 180 LDNIAVARG-VRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG- 237
Query: 266 TYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---QYASLNTTRQLIQ 322
WS + F + + +L +FGDMG Y F + SL+T + +++
Sbjct: 238 ---WSEIHSFVSRNEGSEETL--AFMFGDMG-----CYTPYTTFIRGEEESLSTVKWILR 287
Query: 323 DLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT- 376
D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 288 DIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQP 347
Query: 377 -----GSFYGNKDSGGECGVLAETMFYVPAENRA-----------KFWYSTDYGMFRFCV 420
++ KDSGGECGV F +P + +YS D G F
Sbjct: 348 WKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVY 407
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
TE D+ +G +QY F++ L SV+R K P+++ HR + +S D + E M
Sbjct: 408 ISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSRKIR--DAAIREKM-I 464
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
E L+ L K V +A++GHVH YER C I N C + ++G +H+V G G
Sbjct: 465 EHLEPLLVKNNVTVALWGHVHRYERFCAISNNTCGER----WQGN---PVHLVIGMAGKD 517
Query: 541 LA---------EFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFR 589
E P+ Q S+YR ++G+++L A + L Y + DG+V+D
Sbjct: 518 SQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVA-NKERLTLSYVGNHDGEVHDVVE 576
Query: 590 I 590
I
Sbjct: 577 I 577
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8BX37|PAPL_MOUSE Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2 | Back alignment and function description |
|---|
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 183/432 (42%), Gaps = 70/432 (16%)
Query: 183 MTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242
MTVTWT+ A + VQ+G + +G L F A R YIH
Sbjct: 46 MTVTWTT---WAPARSEVQFGSQ-------LSGPLPFRAHGTARAFVDGGVLRRKLYIHR 95
Query: 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADG 302
L++L P A Y Y+ G S+ WS ++F A G + R+ +FGDMG D
Sbjct: 96 VTLRKLQPGAQYVYRCG-----SSQGWSRRFRFTALKN-GVHWSPRLAVFGDMGADNP-- 147
Query: 303 SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS 358
+L R+ Q D V H+GD Y N + D+F IEP+A+
Sbjct: 148 ---------KALPRLRRDTQQ-GMFDAVLHVGDFAYNMDQDNARVG--DRFMRLIEPVAA 195
Query: 359 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRF 418
++PYM GNHE+ + +F K F +P +N WYS D G
Sbjct: 196 SLPYMTCPGNHEQRY----NFSNYK-----------ARFSMPGDNEG-LWYSWDLGPAHI 239
Query: 419 CVADTE-----HDWREGTE-QYKFIEHCL--ASVDRQKQPWLIFLAHRVLGYSSGIFYAV 470
TE H R E Q++++E+ L A+ +R +PW+I + HR + S+
Sbjct: 240 ISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADL--D 297
Query: 471 DGSFAEPMGRESL-------QKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 523
D + E R+ L + L+ KY VD+ + H H+YER PIY N
Sbjct: 298 DCTRHESRVRKGLHGKLFGLEDLFHKYGVDLEFWAHEHSYERLWPIYNYQVFNGSLESPY 357
Query: 524 GTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL-LFEYKKSS 580
G +H++ G G L F WS R +YG+ ++ + +++ + +
Sbjct: 358 TNPRGPVHIITGSAGCEELLTPFVRKPRPWSAVRVKEYGYTRMHILNGTHMHIQQVSDDQ 417
Query: 581 DGKVYDSFRISR 592
DGK+ D + R
Sbjct: 418 DGKIVDDVWVVR 429
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6ZNF0|PAPL_HUMAN Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2 | Back alignment and function description |
|---|
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 161/376 (42%), Gaps = 60/376 (15%)
Query: 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 298
YIH L++L P Y Y+ G S WS ++F+A G + R+ +FGD+G D
Sbjct: 92 YIHRVTLRKLLPGVQYVYRCG-----SAQGWSRRFRFRALKN-GAHWSPRLAVFGDLGAD 145
Query: 299 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIE 354
A R Q + D V H+GD Y N + D+F IE
Sbjct: 146 NPK----------AVPRLRRDTQQGM--YDAVLHVGDFAYNLDQDNARVG--DRFMRLIE 191
Query: 355 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG 414
P+A+++PYM GNHE + +F K F +P +N WYS D G
Sbjct: 192 PVAASLPYMTCPGNHEERY----NFSNYK-----------ARFSMPGDNEG-LWYSWDLG 235
Query: 415 MFRFCVADTE-----HDWREGTE-QYKFIEHCL--ASVDRQKQPWLIFLAHRVLGYSSGI 466
TE H R + Q++++E L A+ +R +PW+I + HR + S+
Sbjct: 236 PAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNAD 295
Query: 467 FYAVDGSFAEPMGRESLQ-------KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 519
D + E R+ LQ L+ KY VD+ ++ H H+YER PIY N +
Sbjct: 296 L--DDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSR 353
Query: 520 NYYKGTLNGTIHVVAGGGGA--GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL-LFEY 576
G +H++ G G L F WS R +YG+ +L + +++ + +
Sbjct: 354 EMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIHIQQV 413
Query: 577 KKSSDGKVYDSFRISR 592
DGK+ D + R
Sbjct: 414 SDDQDGKIVDDVWVVR 429
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 64/406 (15%)
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
+ M VT+T+ +N A + V++G+ +D+ + + + T + + G I
Sbjct: 62 DHMRVTYTTD-DLNVA-SMVEYGKHPK----------KYDKKTAGESTSYTYFFYNSGKI 109
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP--YPGQNSLQRVVIFGDMGKD 298
H + L PN Y Y+ G E+ FK P +P + + GD+G+
Sbjct: 110 HHVKIGPLKPNTKYYYRCGGH--------GDEFSFKTPPSKFPIE-----FAVAGDLGQ- 155
Query: 299 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358
D+ +L+ R+ ++ D+ GD+ YA+ + WD F +E +AS
Sbjct: 156 --------TDWTVRTLDQIRK-----RDFDVFLLPGDLSYADTHQPLWDSFGRLLETLAS 202
Query: 359 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRF 418
T P+M+ GNHE + SF N + M + + + + +YS D
Sbjct: 203 TRPWMVTEGNHEIE-----SFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHT 257
Query: 419 CVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPM 478
+ + + ++QY +++ L VDR+K PWL+ + H YS+ + +G E M
Sbjct: 258 VMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH-TPWYSTNKAHYGEG---EKM 313
Query: 479 GRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGG 538
R +L+ L + +VD+ GHVH YER PIY K G +++ G GG
Sbjct: 314 -RSALESLLYRAQVDVVFAGHVHTYERFKPIYNK----------KADPCGPMYITIGDGG 362
Query: 539 --AGLA-EFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSD 581
GLA F Q+ S +R+ +G +L DH + + +++D
Sbjct: 363 NREGLALRFKKPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNND 408
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|A5D6U8|PAPL_DANRE Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 182/446 (40%), Gaps = 86/446 (19%)
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGY 239
N M VTW+S N+ ++ V++G GG +HS G + GA R + Y
Sbjct: 43 NSMLVTWSSA---NKTDSVVEYGLWGGKLFSHSATGNSSIFINE--GAEYRVM------Y 91
Query: 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-----PGQNSLQRVVIFGD 294
IH L +L P A Y Y G S WS + F A PG +FGD
Sbjct: 92 IHRVLLTDLRPAASYVYHCG-----SGAGWSELFFFTALNESVFFSPG------FALFGD 140
Query: 295 MGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFT 350
+G + SL+ ++ Q + D++ HIGD Y NG I D+F
Sbjct: 141 LGNENPQ-----------SLSRLQKETQ-IGTYDVILHIGDFAYDLYEDNGRIG--DEFM 186
Query: 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 410
QI+ IA+ VPYM GNHE W S Y + F +P + WYS
Sbjct: 187 KQIQSIAAYVPYMTCPGNHE--WAFNFSQYRAR-------------FSMPGDTEG-LWYS 230
Query: 411 TDYGMFRFCVADTE---HDWREGTE----QYKFIEHCLASVDR----QKQPWLIFLAHRV 459
+ G TE + G + QY+++ L +R ++PW+I + HR
Sbjct: 231 WNVGPAHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWIITMGHRP 290
Query: 460 LGYSSG--------IFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 511
+ S+ Y G L++L+ +Y VD+ ++ H H YER P+Y
Sbjct: 291 MYCSNDDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYERLWPVYD 350
Query: 512 NICTNKEKNYYKGTLNGTIHVVAGGGGAGLAE--FTPLQTTWSLYRDYDYGFVKLTAFDH 569
N +H++ G G F P WS +R DYG+ +L ++
Sbjct: 351 YKVFNGSSEEPYVNPKAPVHIITGSAGCREKHDGFIPKPRDWSAFRSTDYGYTRLQLINN 410
Query: 570 SNLLFEYKKSSD--GKVYDSFRISRD 593
++L E + S D GKV D + ++
Sbjct: 411 THLYLE-QVSDDQYGKVIDQMTLVKE 435
|
Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| 224112110 | 614 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.833 | 0.0 | |
| 297738089 | 672 | unnamed protein product [Vitis vinifera] | 1.0 | 0.910 | 0.825 | 0.0 | |
| 359472541 | 612 | PREDICTED: probable inactive purple acid | 1.0 | 1.0 | 0.825 | 0.0 | |
| 224098974 | 621 | predicted protein [Populus trichocarpa] | 0.998 | 0.983 | 0.800 | 0.0 | |
| 449452841 | 612 | PREDICTED: probable inactive purple acid | 1.0 | 1.0 | 0.799 | 0.0 | |
| 18075960 | 612 | putative metallophosphatase [Lupinus lut | 1.0 | 1.0 | 0.789 | 0.0 | |
| 255542026 | 615 | hydrolase, putative [Ricinus communis] g | 0.970 | 0.965 | 0.823 | 0.0 | |
| 356567597 | 611 | PREDICTED: probable inactive purple acid | 0.998 | 1.0 | 0.792 | 0.0 | |
| 363807632 | 613 | probable inactive purple acid phosphatas | 1.0 | 0.998 | 0.799 | 0.0 | |
| 356526862 | 616 | PREDICTED: probable inactive purple acid | 0.998 | 0.991 | 0.785 | 0.0 |
| >gi|224112110|ref|XP_002316086.1| predicted protein [Populus trichocarpa] gi|222865126|gb|EEF02257.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/613 (83%), Positives = 556/613 (90%), Gaps = 1/613 (0%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
MR L L+FF ILLVL T QVA+SHG PLSRIA+ L +NA +KASP+V+GLKGQN
Sbjct: 2 MRGLELVFFAILLVLATLQVANSHGEQPLSRIAVHNTRLQLFENADIKASPSVLGLKGQN 61
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVN-PPLLCSAPIKYQYANYSSP 119
SEWVT+EY+SPNPS DDWI VFSP+NFSASTC+ ++ S PP LC+APIKYQYANYSSP
Sbjct: 62 SEWVTLEYASPNPSNDDWIGVFSPANFSASTCNPDDGSKQAPPFLCTAPIKYQYANYSSP 121
Query: 120 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 179
Y+ GKGSL+L LINQRSDFS LFSGGL PK+VAVSNK+AFTNPNAPVYPRLAQGK
Sbjct: 122 GYRKEGKGSLRLQLINQRSDFSFVLFSGGLTNPKVVAVSNKVAFTNPNAPVYPRLAQGKI 181
Query: 180 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239
WNEMTVTWTSGYGINEAE FV+WGRK GD SPAGTLTF+R SMCGAPARTVGWRDPG+
Sbjct: 182 WNEMTVTWTSGYGINEAEPFVEWGRKDGDHMRSPAGTLTFNRNSMCGAPARTVGWRDPGF 241
Query: 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 299
IHTSFLKELWPN++YTYK+GH+LFN TY+WS YQF+ASPYPGQ+S+QRVVIFGDMGKDE
Sbjct: 242 IHTSFLKELWPNSVYTYKLGHKLFNGTYVWSQVYQFRASPYPGQSSVQRVVIFGDMGKDE 301
Query: 300 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
ADGSNEYN+FQ SLNTT+QLIQDLKNIDIVFHIGDICYANGY+SQWDQFTAQ+EPIAST
Sbjct: 302 ADGSNEYNNFQRGSLNTTKQLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQVEPIAST 361
Query: 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 419
VPYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC
Sbjct: 362 VPYMIASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 421
Query: 420 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 479
+ADTEHDWREGTEQYKFIEHCLAS DRQKQPWLIFLAHRVLGYSS +YA GSF EPMG
Sbjct: 422 IADTEHDWREGTEQYKFIEHCLASADRQKQPWLIFLAHRVLGYSSATWYADQGSFEEPMG 481
Query: 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 539
RESLQKLWQKYKVDIA+YGHVHNYERTCPIYQNICT+KEK +YKGTLNGTIHVVAGGGGA
Sbjct: 482 RESLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTSKEKFFYKGTLNGTIHVVAGGGGA 541
Query: 540 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 599
LA+FTP+ TTWS ++D+DYGFVKLTAFDHSNLLFEYKKS DG+VYDSF+ISRDYRDILA
Sbjct: 542 SLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLFEYKKSRDGEVYDSFKISRDYRDILA 601
Query: 600 CTVGSCPSTTLAS 612
CTV SCPS TLAS
Sbjct: 602 CTVDSCPSMTLAS 614
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738089|emb|CBI27290.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/612 (82%), Positives = 548/612 (89%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
MR IL L + A SHG PL++IAI A +AL+D AYVKASP V+GL GQN
Sbjct: 61 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 120
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+E+VTVE+SSP+PSVDDWI VFSP+NFSASTC E+ V PPLLCSAPIKYQYANY+SP
Sbjct: 121 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 180
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TGKGSLKL LINQRSDFS ALFSGGL+ PKLVAVSN +AF NPNAPVYPRLAQGK W
Sbjct: 181 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 240
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A F++WG KGGD+ SPAGTLTFDR SMCGAPA TVGWRDPGYI
Sbjct: 241 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 300
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTSFLKELWPN +Y+YK+GHRLFN TYIWS +YQF+ASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 301 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 360
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +Q SLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 361 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 420
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTD+GMFRFC+
Sbjct: 421 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 480
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
ADTEHDWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMGR
Sbjct: 481 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 540
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
+ LQKLWQKYKVDIA+YGHVHNYERTCPIYQNICTN+EK+YYKGTLNGTIHVVAGGGGA
Sbjct: 541 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 600
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
LA+FT + T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSFRISR YRDILAC
Sbjct: 601 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 660
Query: 601 TVGSCPSTTLAS 612
TV SCPS+TLAS
Sbjct: 661 TVDSCPSSTLAS 672
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472541|ref|XP_002274118.2| PREDICTED: probable inactive purple acid phosphatase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/612 (82%), Positives = 548/612 (89%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
MR IL L + A SHG PL++IAI A +AL+D AYVKASP V+GL GQN
Sbjct: 1 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 60
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+E+VTVE+SSP+PSVDDWI VFSP+NFSASTC E+ V PPLLCSAPIKYQYANY+SP
Sbjct: 61 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 120
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TGKGSLKL LINQRSDFS ALFSGGL+ PKLVAVSN +AF NPNAPVYPRLAQGK W
Sbjct: 121 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 180
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A F++WG KGGD+ SPAGTLTFDR SMCGAPA TVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 240
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTSFLKELWPN +Y+YK+GHRLFN TYIWS +YQF+ASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 241 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +Q SLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 301 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYMIASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRAKFWYSTD+GMFRFC+
Sbjct: 361 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 420
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
ADTEHDWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
+ LQKLWQKYKVDIA+YGHVHNYERTCPIYQNICTN+EK+YYKGTLNGTIHVVAGGGGA
Sbjct: 481 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGAS 540
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
LA+FT + T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSFRISR YRDILAC
Sbjct: 541 LADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILAC 600
Query: 601 TVGSCPSTTLAS 612
TV SCPS+TLAS
Sbjct: 601 TVDSCPSSTLAS 612
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098974|ref|XP_002311341.1| predicted protein [Populus trichocarpa] gi|222851161|gb|EEE88708.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/622 (80%), Positives = 547/622 (87%), Gaps = 11/622 (1%)
Query: 1 MRELRLIFFGILLVLGTF-QVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 59
MR L L+FF LVL T QV +SHG PLSRI ++ L++NAYVKASP+++GLKGQ
Sbjct: 1 MRGLGLVFFAFFLVLATLLQVTTSHGEQPLSRIVVQNTELHLSENAYVKASPSILGLKGQ 60
Query: 60 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSA--------STCSAENPS-VNPPLLCSAPIK 110
N EWVT+EY+SPNPS+DDWI VFSP++FSA STC+ ++ S + PP LC+APIK
Sbjct: 61 NFEWVTLEYASPNPSIDDWIGVFSPADFSAYFLSISTASTCTPDDGSKLAPPFLCTAPIK 120
Query: 111 YQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPV 170
YQYANYSSP Y+ TGKGSL+L LINQRSDFS LFSGGL PKL+AVSNK+AFTNPNAPV
Sbjct: 121 YQYANYSSPGYRKTGKGSLRLQLINQRSDFSSVLFSGGLSNPKLMAVSNKVAFTNPNAPV 180
Query: 171 YPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPAR 230
YPRLAQGK WNEMTVTWT GYGINEAE FV+WG+K GDR HS AGTLTFDR S+CGAPAR
Sbjct: 181 YPRLAQGKIWNEMTVTWTCGYGINEAEPFVEWGQKDGDRMHSLAGTLTFDRNSLCGAPAR 240
Query: 231 TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVV 290
TVGWRDPG+IHTSFLKELWPNA+YTYK+GH+LFN TY+WS EYQF+ASPYPGQ+S+QRVV
Sbjct: 241 TVGWRDPGFIHTSFLKELWPNAVYTYKLGHKLFNGTYVWSQEYQFRASPYPGQSSVQRVV 300
Query: 291 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT 350
IFGDMGKDEADGSNEYN++Q SLNTT+QL QDLKNIDIVFHIGDICYANGY+SQWDQFT
Sbjct: 301 IFGDMGKDEADGSNEYNNYQRGSLNTTKQLSQDLKNIDIVFHIGDICYANGYLSQWDQFT 360
Query: 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 410
AQ+EPIASTVPYM+ASGNHERDWPGTGSFYGN DSGGECGVLAETMFYVPAENRA FWYS
Sbjct: 361 AQVEPIASTVPYMVASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRANFWYS 420
Query: 411 TDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 470
TDYGM RFC ADTEHDWRE TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYS FYA
Sbjct: 421 TDYGMLRFCRADTEHDWREATEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSFSTFYAD 480
Query: 471 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTI 530
+GSF EPMGRESLQKLWQKYKVDIAIYGH HNYERTCPIYQNICT+KEK+YYKG LNGTI
Sbjct: 481 EGSFEEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPIYQNICTSKEKSYYKGALNGTI 540
Query: 531 HVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 590
H VAGGGGA LA+FTP+ TTWS ++D+DYGFVKLTAFDHSNLL EYKKS DGK YDSF+I
Sbjct: 541 H-VAGGGGASLADFTPINTTWSYFKDHDYGFVKLTAFDHSNLLLEYKKSRDGKFYDSFKI 599
Query: 591 SRDYRDILACTVGSCPSTTLAS 612
SR YRDI CTV SCPS TLAS
Sbjct: 600 SRGYRDITVCTVDSCPSMTLAS 621
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452841|ref|XP_004144167.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1046 bits (2704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/612 (79%), Positives = 538/612 (87%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
MR L + GIL +L T SHG HP S+IAIRK T+ALN +A VKASP+V+GLKG+N
Sbjct: 1 MRFLGFVCLGILWILATLHQVKSHGNHPFSKIAIRKTTFALNKHANVKASPSVLGLKGEN 60
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+EWVT+EYSSP+PS DDWI VFSP+NFS+STC ENP V PPLLCSAPIK+ +ANY++
Sbjct: 61 TEWVTLEYSSPDPSSDDWIGVFSPANFSSSTCPVENPRVYPPLLCSAPIKFLFANYTNAN 120
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TG+G LKL LINQR+DFS ALFSGGL KPK+VA+SN++ F NP+AP+YPRLAQGK W
Sbjct: 121 YKTTGRGLLKLQLINQRADFSFALFSGGLSKPKVVAISNRVTFANPDAPLYPRLAQGKNW 180
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGI+EAE V W + G D SPAGTLTFDR SMCGAPART GWRDPG+I
Sbjct: 181 NEMTVTWTSGYGIDEAEPLVAWSQNGKDLMQSPAGTLTFDRNSMCGAPARTEGWRDPGFI 240
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTSFLKELWPN YTYK+GH+L N TYIWSS Y+FKASPYPGQNSLQRVVIFGDMGKDEA
Sbjct: 241 HTSFLKELWPNQEYTYKLGHKLNNGTYIWSSTYKFKASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN+FQ SLNTTRQLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQI PIASTV
Sbjct: 301 DGSNEYNNFQRGSLNTTRQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYMIASGNHERDWPG+GSFY DSGGECGV+A+ MFYVPAENR KFWY+TDYGMFRFCV
Sbjct: 361 PYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNMFYVPAENREKFWYATDYGMFRFCV 420
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
A+TE DWREGTEQYKFIEHCL+SVDRQKQPWLIFLAHRVLGYSS FYA GS +EPMGR
Sbjct: 421 ANTELDWREGTEQYKFIEHCLSSVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGR 480
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
ESLQ LWQKYKVD+AIYGHVH+YERTCPIYQNICTN++K+YYKG LNGTIHVVAGGGGA
Sbjct: 481 ESLQSLWQKYKVDLAIYGHVHSYERTCPIYQNICTNEKKHYYKGPLNGTIHVVAGGGGAS 540
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
L+ F LQT WS++RDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC
Sbjct: 541 LSPFISLQTKWSIFRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
Query: 601 TVGSCPSTTLAS 612
V SCP TTLAS
Sbjct: 601 AVDSCPRTTLAS 612
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18075960|emb|CAD12837.1| putative metallophosphatase [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/612 (78%), Positives = 538/612 (87%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
M + + +F G LLV Q+ SHG HPLS+++I +A+ +L D A++K SP ++GL+GQ
Sbjct: 1 MGDSKFVFLGYLLVCSVLQLVWSHGDHPLSKVSIHRASLSLLDLAHIKVSPPILGLQGQT 60
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+EWVT+EYSSP PS+DDWI VFSPSNFSAS C AEN V PPLLCSAPIKYQYANYS+PQ
Sbjct: 61 AEWVTLEYSSPIPSIDDWIGVFSPSNFSASACPAENRRVYPPLLCSAPIKYQYANYSNPQ 120
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
Y TGKG LKL LINQRSDFS A+FSGGL PK+VA+SNKI+F NPNAPVYPRLA GK W
Sbjct: 121 YSATGKGILKLQLINQRSDFSFAMFSGGLSNPKVVAISNKISFANPNAPVYPRLAMGKLW 180
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGINEA+ VQWG KGGD HSPAGTLTF + S+CGAPARTVGWRDPG+I
Sbjct: 181 NEMTVTWTSGYGINEADPLVQWGPKGGDHIHSPAGTLTFTKDSLCGAPARTVGWRDPGFI 240
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTS+LKELWPN +Y YK+GHRL N TYIWS YQF+A+P+PGQ SLQRV IFGDMGKDE
Sbjct: 241 HTSYLKELWPNRIYEYKIGHRLNNGTYIWSQNYQFRAAPFPGQKSLQRVAIFGDMGKDEV 300
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN+FQ SLNTT+QLIQDL+NID+VFHIGDI YANGY+SQWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQRGSLNTTQQLIQDLENIDMVFHIGDISYANGYLSQWDQFTAQVEPIASAV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYMIASG+HERDWPGTGSFY N DSGGECGVLA+ MFYVPA NRAKFWY DYGMFRF +
Sbjct: 361 PYMIASGSHERDWPGTGSFYENMDSGGECGVLAQIMFYVPASNRAKFWYPIDYGMFRFRI 420
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSS I YA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT++EK++YKGTLNGTIH+VAGG GA
Sbjct: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTSEEKHHYKGTLNGTIHIVAGGAGAS 540
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
L+ FT L+T WS+++DYD+GFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILAC
Sbjct: 541 LSTFTSLKTKWSIFKDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILAC 600
Query: 601 TVGSCPSTTLAS 612
TV SCP TTLAS
Sbjct: 601 TVDSCPRTTLAS 612
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542026|ref|XP_002512077.1| hydrolase, putative [Ricinus communis] gi|223549257|gb|EEF50746.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/596 (82%), Positives = 536/596 (89%), Gaps = 2/596 (0%)
Query: 19 QVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDW 78
Q A S GG P SRIA K T++LN NAYVKASP+++G++GQNSEW+TVEY+S NPS+ DW
Sbjct: 20 QEARSQGGQPFSRIAFHKTTFSLNGNAYVKASPSILGIRGQNSEWITVEYTSTNPSIADW 79
Query: 79 IAVFSPSNFSASTCSAENP--SVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQ 136
I VFSP+NFSAS+C+ E+ V PP LCSAP+K+QYANYSSP YK TGKGSL+L LINQ
Sbjct: 80 IGVFSPANFSASSCNPESSSSKVAPPFLCSAPVKFQYANYSSPGYKDTGKGSLRLRLINQ 139
Query: 137 RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA 196
RSDFS ALFSGGL PKLVAVSN +AF NPNAPVYPRLAQGK WNEMTVTWTSGYGINEA
Sbjct: 140 RSDFSFALFSGGLGNPKLVAVSNIVAFANPNAPVYPRLAQGKIWNEMTVTWTSGYGINEA 199
Query: 197 EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 256
E FV+WG KGGD SPAGTLTF SMCG+PARTVGWRDPG+IHTSFLKELWPN +Y Y
Sbjct: 200 EPFVEWGPKGGDLKRSPAGTLTFTPNSMCGSPARTVGWRDPGFIHTSFLKELWPNVLYKY 259
Query: 257 KVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 316
K+GH+L N TYIWS +YQF+ASPYPGQ+SLQRVVIFGDMGKDE DGSNEYN+FQ+ SLNT
Sbjct: 260 KLGHKLLNGTYIWSQDYQFRASPYPGQSSLQRVVIFGDMGKDEIDGSNEYNNFQHGSLNT 319
Query: 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT 376
T+QLIQDLKNIDIVFHIGDICYANGYISQWDQFT+Q+EPIASTVPYMIASGNHERDWPGT
Sbjct: 320 TKQLIQDLKNIDIVFHIGDICYANGYISQWDQFTSQVEPIASTVPYMIASGNHERDWPGT 379
Query: 377 GSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKF 436
GSFYGN DSGGECGV A+TMFYVP ENR FWYSTDYGMFRFC+ADTEHDWREGTEQYKF
Sbjct: 380 GSFYGNTDSGGECGVPAQTMFYVPTENRDNFWYSTDYGMFRFCIADTEHDWREGTEQYKF 439
Query: 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAI 496
IEHCLASVDRQKQPWL+FLAHRVLGYSS +YA +GSF EPMGRESLQKLWQKYKVDIAI
Sbjct: 440 IEHCLASVDRQKQPWLVFLAHRVLGYSSASWYADEGSFEEPMGRESLQKLWQKYKVDIAI 499
Query: 497 YGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRD 556
YGHVHNYERTCPIYQNICTN+EK+ YKG LNGTIHVVAGGGGA LA+FT + TTWS ++D
Sbjct: 500 YGHVHNYERTCPIYQNICTNQEKHSYKGALNGTIHVVAGGGGASLADFTTINTTWSYFKD 559
Query: 557 YDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLAS 612
+DYGFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILACTV SCPSTTLAS
Sbjct: 560 HDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILACTVDSCPSTTLAS 615
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567597|ref|XP_003552004.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/612 (79%), Positives = 544/612 (88%), Gaps = 1/612 (0%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
M + R++FF +LVL TFQ A S PLS++AI K T AL++ A++KA+P V+GLKGQN
Sbjct: 1 MGKSRVLFFS-MLVLATFQKAVSEEHQPLSKVAIHKTTLALDERAFIKATPNVLGLKGQN 59
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+EWVT++YS+P P+VDDWI VFSP+NF+ASTC AEN VNPP LCSAPIKYQYAN+SS
Sbjct: 60 TEWVTLQYSNPKPTVDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHG 119
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TGKGSLKL LINQRSDFS ALF+GGL PKLVAVSNK++F NPNAPVYPRLAQGKTW
Sbjct: 120 YKNTGKGSLKLQLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTW 179
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
+EMTVTWTSGY I++AE FV+WG KGG+ SPAGTLTFDR +MCGAPARTVGWRDPGYI
Sbjct: 180 DEMTVTWTSGYEISDAEPFVEWGPKGGNLVKSPAGTLTFDRNTMCGAPARTVGWRDPGYI 239
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTSFLKELWPN Y YK+GH+LFN T IWS EYQFKASPYPGQNSLQRVVIFGDMGK EA
Sbjct: 240 HTSFLKELWPNREYKYKLGHKLFNGTIIWSQEYQFKASPYPGQNSLQRVVIFGDMGKAEA 299
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN+FQ SLNTT+Q+IQDLK+IDIVF+IGD+ YANGY+SQWDQFTAQIEPIASTV
Sbjct: 300 DGSNEYNNFQPGSLNTTKQIIQDLKDIDIVFNIGDLSYANGYLSQWDQFTAQIEPIASTV 359
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYM ASGNHERDWP TGSFYGN DSGGECGVLA+TMFYVPAENR KFWYS DYGMFRFC+
Sbjct: 360 PYMTASGNHERDWPDTGSFYGNLDSGGECGVLAQTMFYVPAENREKFWYSVDYGMFRFCI 419
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
A+TE DWR+G+EQYKFIE+CLASVDRQKQPWLIFLAHRVLGYSS FY +GSF EPMGR
Sbjct: 420 ANTELDWRKGSEQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGR 479
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
E LQ LWQKYKVDIA+YGHVHNYERTCP+YQNICTNKE++ YKG+L+GTIHVV GGGGA
Sbjct: 480 EDLQYLWQKYKVDIAMYGHVHNYERTCPVYQNICTNKEEHNYKGSLDGTIHVVVGGGGAS 539
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
LAEF P+ TTWS+++D+D+GFVKLTAFDHSNLLFEYKKSSDG+VYDSF+ISR YRDILAC
Sbjct: 540 LAEFAPINTTWSIFKDHDFGFVKLTAFDHSNLLFEYKKSSDGQVYDSFKISRQYRDILAC 599
Query: 601 TVGSCPSTTLAS 612
TV SCP TTLAS
Sbjct: 600 TVDSCPPTTLAS 611
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363807632|ref|NP_001242158.1| probable inactive purple acid phosphatase 1-like precursor [Glycine max] gi|304421410|gb|ADM32504.1| purple acid phosphatases [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/613 (79%), Positives = 535/613 (87%), Gaps = 1/613 (0%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
M E + + LLV Q SHG HPLS++A+ KAT +L D AY+KASPAV+GL+ Q
Sbjct: 1 MGESKFVSLAFLLVCLVVQRVWSHGYHPLSKVAVHKATVSLLDLAYIKASPAVLGLQEQT 60
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+EWVT+EYSSP PS+ DWI VFSP+NFSASTC EN V PPLLCSAPIKYQYANYSSP
Sbjct: 61 AEWVTLEYSSPIPSIGDWIGVFSPANFSASTCPKENRRVYPPLLCSAPIKYQYANYSSPL 120
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TGKG LKL+LINQRSDFS ALFSGGL PKLVAVS+KIAF NPNAP+YPRLA GK+W
Sbjct: 121 YKETGKGFLKLLLINQRSDFSFALFSGGLSNPKLVAVSDKIAFANPNAPLYPRLALGKSW 180
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+AE FVQWG K GDR HSPA TLTF R SMCGAPARTVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAEPFVQWGPKEGDRMHSPAETLTFTRDSMCGAPARTVGWRDPGYI 240
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTS LKELWPN +Y Y++GH+L N TYIWS YQF A P PGQ SLQRVVIFGDMGK E
Sbjct: 241 HTSHLKELWPNKIYEYRIGHKLNNVTYIWSGNYQFTAPPCPGQKSLQRVVIFGDMGKGEV 300
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN+FQ+ S+NTT+QLIQDL++IDIVFHIGDICYANGY+ QWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQHGSINTTQQLIQDLEDIDIVFHIGDICYANGYLPQWDQFTAQVEPIASAV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYMIASGNHERDWPGTGSFY N DSGGECGVLA+TMFY PA NRAK WYS DYGMFRFC+
Sbjct: 361 PYMIASGNHERDWPGTGSFYENMDSGGECGVLAQTMFYTPASNRAKLWYSIDYGMFRFCI 420
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
ADTEHDWREGTEQYKFIEHCLASVDRQKQPW+IFLAHRVLGYSS I YA +GSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWIIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKG-TLNGTIHVVAGGGGA 539
ES QKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN+EK++YKG TLNGTIHVVAGGGGA
Sbjct: 481 ESFQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNEEKHHYKGRTLNGTIHVVAGGGGA 540
Query: 540 GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 599
L+ FT L+T WS+++DYDYGFVKLTAFDHSNLLFEYKKS DGKVYDSF+ISRDYRDILA
Sbjct: 541 SLSAFTSLKTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFKISRDYRDILA 600
Query: 600 CTVGSCPSTTLAS 612
CT+ SCPS T+AS
Sbjct: 601 CTMDSCPSITMAS 613
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526862|ref|XP_003532035.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/612 (78%), Positives = 542/612 (88%), Gaps = 1/612 (0%)
Query: 1 MRELRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQN 60
M R++ F LLVL TFQ S PLS++AI K T AL++ AY+KA+P+V+GLKGQN
Sbjct: 6 MGNSRVLIFS-LLVLATFQQVVSDEHQPLSKVAIHKTTLALDERAYIKATPSVLGLKGQN 64
Query: 61 SEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQ 120
+EWVT++YS+P P++DDWI VFSP+NF+ASTC AEN VNPP LCSAPIKYQYAN+SS
Sbjct: 65 TEWVTLQYSNPKPTIDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHG 124
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
YK TGKGSLKL LINQRSDFS ALF+GGL PKLVAVSNK++F NPNAPVYPRLAQGKTW
Sbjct: 125 YKNTGKGSLKLQLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTW 184
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240
+E+TVTWTSGYGI++AE FV+WG KGG+ SPAGTLTFD +MCGAPARTVGWRDPGYI
Sbjct: 185 DEITVTWTSGYGISDAEPFVEWGPKGGNLVKSPAGTLTFDHNTMCGAPARTVGWRDPGYI 244
Query: 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEA 300
HTSFLKELWPN Y YK+GHRLFN T IWS EYQFKASP+PGQNSLQRVVIFGD+GK EA
Sbjct: 245 HTSFLKELWPNQEYKYKLGHRLFNGTIIWSQEYQFKASPFPGQNSLQRVVIFGDLGKAEA 304
Query: 301 DGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN+FQ SLNTT+Q++QDLK+IDIVFHIGD+CYA+GY+SQWDQFTAQIEPIASTV
Sbjct: 305 DGSNEYNNFQPGSLNTTKQIVQDLKDIDIVFHIGDLCYASGYLSQWDQFTAQIEPIASTV 364
Query: 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420
PYM ASGNHERDWP TGSFYG DSGGECGV A+T FYVPAENR KFWYS DYGMFRFC+
Sbjct: 365 PYMTASGNHERDWPDTGSFYGTLDSGGECGVPAQTTFYVPAENREKFWYSVDYGMFRFCI 424
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
A+TE DWR+G+EQYKFIE+CLA+VDRQKQPWLIFLAHRVLGYSS FYA +GSF EPMGR
Sbjct: 425 ANTELDWRKGSEQYKFIENCLATVDRQKQPWLIFLAHRVLGYSSAGFYAAEGSFEEPMGR 484
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG 540
E LQ LWQKYKVDIA+YGHVHNYERTCP+YQNICTNKEKN YKG+L+GTIHVV GGGGA
Sbjct: 485 EDLQYLWQKYKVDIAMYGHVHNYERTCPVYQNICTNKEKNNYKGSLDGTIHVVVGGGGAS 544
Query: 541 LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILAC 600
LAEF P+ TTWS+++D+D+GFVKLTAFDHSN LFEYKKSSDG+VYDSFRISR+YRDILAC
Sbjct: 545 LAEFAPINTTWSIFKDHDFGFVKLTAFDHSNFLFEYKKSSDGQVYDSFRISREYRDILAC 604
Query: 601 TVGSCPSTTLAS 612
TV SCP+TTLAS
Sbjct: 605 TVDSCPATTLAS 616
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 1.0 | 0.998 | 0.760 | 1.9e-264 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.980 | 0.981 | 0.685 | 1.5e-234 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.964 | 0.959 | 0.655 | 5.2e-223 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.421 | 0.434 | 0.374 | 7.7e-58 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.714 | 0.666 | 0.326 | 2.6e-55 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.529 | 0.497 | 0.315 | 2.9e-51 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.545 | 0.774 | 0.279 | 9.8e-28 | |
| DICTYBASE|DDB_G0268222 | 492 | DDB_G0268222 "acid phosphatase | 0.624 | 0.776 | 0.266 | 2e-24 | |
| DICTYBASE|DDB_G0285351 | 454 | DDB_G0285351 [Dictyostelium di | 0.560 | 0.755 | 0.263 | 5e-21 | |
| FB|FBgn0030245 | 458 | CG1637 [Drosophila melanogaste | 0.514 | 0.687 | 0.275 | 3.4e-20 |
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2544 (900.6 bits), Expect = 1.9e-264, P = 1.9e-264
Identities = 466/613 (76%), Positives = 516/613 (84%)
Query: 1 MRE-LRLIFFGILLVLGTFQVASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQ 59
MRE L I ++ VLG SH PLS IA+ K T+ LN+ AYVKASP V+G GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSEWVTVEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSP 119
+SE V V+YSSP PS DDWI VFSP++F+ASTC +N V PP LCSAP+K+QYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKT 179
+Y TG GSLKL LINQRSDFS ALFSGGLL PKLVA+SNK+AF NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AE V+WG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDE 299
IHT+FLKELWPN+ YTY+VGHRL N IWS EYQFK+SP+PGQNS+Q+VVIFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYNDFQ ASLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY DSGGECGV AETMFYVPA+NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 VADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 479
VADTEHDWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS FYA +GSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXX 539
RESLQKLWQKYKVDIAIYGH HNYERTCP+YQ++CT+ EK+ YK LNGTIH
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGA 540
Query: 540 XLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILA 599
LAEF+ LQ WSL+RDYDYGF+KLTA DHSNLLFEYKKSSDG+V+DSF IS+DYRDILA
Sbjct: 541 GLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTISKDYRDILA 600
Query: 600 CTVGSCPSTTLAS 612
C V SCP+TTLAS
Sbjct: 601 CAVDSCPATTLAS 613
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2262 (801.3 bits), Expect = 1.5e-234, P = 1.5e-234
Identities = 416/607 (68%), Positives = 479/607 (78%)
Query: 12 LLVLGTF--QVASSH----GGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVT 65
LLVL F QV+SSH G LS+I I A + +A++ SP V+G +GQ++EWV
Sbjct: 6 LLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWVN 65
Query: 66 VEYSSPNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTG 125
V S+P PS DDW+ VFSP+ F +S+C+ + P +CSAP+KY YA SSP Y TG
Sbjct: 66 VVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKTG 124
Query: 126 KGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTV 185
LK MLINQR+DFS ALF+GGL P LV+VSN ++F NP APVYPRLA GK W+EMTV
Sbjct: 125 NAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMTV 184
Query: 186 TWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245
TWTSGY I EA FV+W RKG SPAGTLTF R SMCGAPARTVGWRDPG+IHT+ L
Sbjct: 185 TWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTASL 244
Query: 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNE 305
K+LWPN YTY++GH L N + +WS + FK+SPYPGQ+SLQRV+IFGDMGK E DGSNE
Sbjct: 245 KDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNE 304
Query: 306 YNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365
YND+Q SLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+A
Sbjct: 305 YNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVA 364
Query: 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH 425
SGNHERDWP +GSFYG KDSGGECGV AETMF PAEN+AKFWYS DYGMFRFCVADTEH
Sbjct: 365 SGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEH 424
Query: 426 DWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQK 485
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS+ +Y +GSF EPMGRESLQK
Sbjct: 425 DWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQK 484
Query: 486 LWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFT 545
LWQKYKVDIA YGHVHNYERTCPIYQN C + EK++Y G GTIH L+ F+
Sbjct: 485 LWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSFS 544
Query: 546 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSC 605
L+ WS++RDYDYGFVKLTAFDHS+LLFEYKKSS+G V+DSF I R+YRD+LAC SC
Sbjct: 545 SLKPKWSIFRDYDYGFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDSC 604
Query: 606 PSTTLAS 612
TTLAS
Sbjct: 605 EPTTLAS 611
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2153 (763.0 bits), Expect = 5.2e-223, P = 5.2e-223
Identities = 388/592 (65%), Positives = 459/592 (77%)
Query: 21 ASSHGGHPLSRIAIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIA 80
A+ G L++I + + + AL+ + + ASP V+G +G+++EWV + S+P P+ DDWI
Sbjct: 24 ANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIG 83
Query: 81 VFSPSNFSASTC-SAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSD 139
VFSP+ F + C P +CS+PIKY Y N S P Y +G +LK +INQR+D
Sbjct: 84 VFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRAD 142
Query: 140 FSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAF 199
S ALFS G+ +P L+ VSN +AF NP APVYPRLA GK W+EMTVTWTSGY I+EA F
Sbjct: 143 VSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPF 202
Query: 200 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVG 259
++W KG SPAGTLTF+R SMCG PAR VGWRDPG+ HTSFLKELWPN Y Y++G
Sbjct: 203 IEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLG 262
Query: 260 HRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQ 319
H L N + IWS Y F +SPYPGQ+S QRV+IFGDMGK E DGSNEYND+Q SLNTT Q
Sbjct: 263 HDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQ 322
Query: 320 LIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 379
+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSF
Sbjct: 323 VIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSF 382
Query: 380 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 439
Y DSGGECGV AETMFY PAENRAKFWY TDYGMFRFCVAD+EHDWREGTEQYKFIE+
Sbjct: 383 YAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIEN 442
Query: 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 499
CLA+VDR+ QPWLIF+AHRVLGYS+ +Y +G+F EPMGRESLQKLWQKYKVD+A YGH
Sbjct: 443 CLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGH 502
Query: 500 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDY 559
VHNYERTCPIY++ C N +K++Y GT GTIH L+ F+ L WSL RDYD+
Sbjct: 503 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 562
Query: 560 GFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDILACTVGSCPSTTLA 611
GFVKLTA DHS+LLFEYKKSS G+VYDSF ISRDYRD+LACT SC TT A
Sbjct: 563 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 431 (156.8 bits), Expect = 7.7e-58, Sum P(2) = 7.7e-58
Identities = 103/275 (37%), Positives = 150/275 (54%)
Query: 330 VFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPG-----TGSFYGNKD 384
V HIGDI YA G WD F ++PI S VPYM++ GNHE D+ G + S YG+ D
Sbjct: 325 VHHIGDISYARGKAFIWDYFMDSMQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSNYGS-D 383
Query: 385 SGGECGVLAETMFYVP-AENRAK-FWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLA 442
SGGECGV F++ AE+ + W+S + G F V EHD+ G+ Q++++ + LA
Sbjct: 384 SGGECGVPYSKRFHMTGAEDSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNNDLA 443
Query: 443 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHN 502
SVDR+K PW+IF HR L Y+S + GS RE+++ L+QKY VD+A++GHVH
Sbjct: 444 SVDREKTPWVIFSGHRPL-YTSALPEDSIGSITAL--REAIEPLFQKYDVDMALWGHVHI 500
Query: 503 YERTCPIYQNI-CTNKEKN----YYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDY 557
YERTC N C + + + G T + WS++R
Sbjct: 501 YERTCGFIGNFTCADNDNDGTVHVIIGMAGNTYSVPWEGSDISSGNGHEDEPEWSIFRSI 560
Query: 558 DYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 592
YG V+ A + ++L FE+ + V+DSF +++
Sbjct: 561 SYGHVRFYA-NTTSLYFEFVGNHRSIVHDSFWLNK 594
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 168/514 (32%), Positives = 252/514 (49%)
Query: 42 NDNAYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVN 100
+ A + SP + G + V +++S +PS DW+ ++SP E+P N
Sbjct: 21 DSKATISISPNALNRSGDS---VVIQWSGVDSPSDLDWLGLYSPP---------ESP--N 66
Query: 101 PPLLCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK----- 153
I Y++ N SS +K G GS+ L L N RS+++ +F S + PK
Sbjct: 67 DHF-----IGYKFLNESST-WKD-GFGSISLPLTNLRSNYTFRIFRWSESEIDPKHKDHD 119
Query: 154 ---------LVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWG 203
L+A S ++ F + P L+ N M V + +G G E FV++G
Sbjct: 120 QNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERFVRYG 176
Query: 204 RKGGDRTHSPAGT-LTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHR 261
+S A + ++R MC +PA T+GWRDPG+I + +K L Y Y+VG
Sbjct: 177 ESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQVG-- 234
Query: 262 LFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI 321
+ + WS + + A + ++ +FGDMG A + Q S++T + ++
Sbjct: 235 --SDSKGWSEIHSYIARDVTAEETV--AFMFGDMGC--ATPYTTFIRTQDESISTVKWIL 288
Query: 322 QDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD----- 372
+D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE D
Sbjct: 289 RDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQP 348
Query: 373 W-PG-TGSFYGNKDSGGECGVLAETMFYVPAEN------RA----KFWYSTDYGMFRFCV 420
W P S YGN D GGECGV F +P + +A +YS D G F
Sbjct: 349 WKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVY 407
Query: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGR 480
TE ++ +G QY+FI+ L SVDR+K P+++ HR + +S D + M
Sbjct: 408 ISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN--EVRDTMIRQKMV- 464
Query: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 514
E L+ L+ K V +A++GHVH YER CPI N C
Sbjct: 465 EHLEPLFVKNNVTLALWGHVHRYERFCPISNNTC 498
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 356 (130.4 bits), Expect = 2.9e-51, Sum P(2) = 2.9e-51
Identities = 124/393 (31%), Positives = 186/393 (47%)
Query: 45 AYVKASPAVVGLKGQNSEWVTVEYSS-PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPL 103
A + SP + G + V +++S +PS DW+ ++SP ++P +
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSPP---------DSPHDHF-- 67
Query: 104 LCSAPIKYQYANYSSPQYKGTGKGSLKLMLINQRSDFSVALF--SGGLLKPK-------- 153
I Y++ + SP ++ +G GS+ L L N RS+++ +F + + PK
Sbjct: 68 -----IGYKFLS-DSPTWQ-SGSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 154 ------LVAVSNKIAFTNP-NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR-K 205
L+ SN++ F N P L+ NEM V + +G G E EA ++G K
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EEREA--RYGEVK 177
Query: 206 GGDRTHSPAGTLTFDRGSMCGAPAR-TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFN 264
+ A + ++ MC APA TVGWRDPG+ + +K L Y Y+VG L
Sbjct: 178 DKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG 237
Query: 265 STYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDF---QYASLNTTRQLI 321
WS + F + + +L +FGDMG Y F + SL+T + ++
Sbjct: 238 ----WSEIHSFVSRNEGSEETL--AFMFGDMGC-----YTPYTTFIRGEEESLSTVKWIL 286
Query: 322 QDLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT 376
+D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 287 RDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQ 346
Query: 377 ------GSFYGNKDSGGECGVLAETMFYVPAEN 403
++ KDSGGECGV F +P +
Sbjct: 347 PWKPDWAAYVYGKDSGGECGVPYSVKFNMPGNS 379
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 107/383 (27%), Positives = 178/383 (46%)
Query: 231 TVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY--P-GQNSLQ 287
T+G+ G I+T+ + L P+ MY Y VG + N IWSS + F + + P G+
Sbjct: 80 TIGF--DGKINTAVMSSLSPSTMYFYCVGDKSLN---IWSSIFNFTTNQFDAPFGKVIPF 134
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN------- 340
FGDMG E D N + + T LI + I I+ H+GDI YA+
Sbjct: 135 TTSFFGDMGWIEGDSLN-------SDVYTVDNLISRINEIQILHHVGDIAYADKQKPYNL 187
Query: 341 -GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 399
G + W++F I P++S +PY+ GNH+R F + V +T + +
Sbjct: 188 PGNQTIWNKFQNSISPLSSHLPYLTCPGNHDR-------FI-------DLSVYTKT-WQM 232
Query: 400 PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQP--WLIFLAH 457
P + + WYS DY F +EHD+ + Q+ +IE+ L R+ P W++ +H
Sbjct: 233 PVDFESDSWYSYDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQY-RKSNPNGWIVMYSH 291
Query: 458 RVLGYSSGIF---YAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQN-I 513
R Y S ++ +D ++ + SL+ L KY VD+ I GH H+YERT P+++N I
Sbjct: 292 RPF-YCSVVWDWCSNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFKNKI 350
Query: 514 CTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLL 573
+ E K T++ + + + P Q + R GF L + + L
Sbjct: 351 MGDVESP--KATVHIVVGTGGDVEGEDMI-WQPSQQWTTGLRTSINGFGLLNVINSTTLN 407
Query: 574 FEYKKSSDGKVYDSFRISRDYRD 596
+++ + + + D F +++ D
Sbjct: 408 WQFVANINNTIIDEFNLTKGQFD 430
|
|
| DICTYBASE|DDB_G0268222 DDB_G0268222 "acid phosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 116/436 (26%), Positives = 187/436 (42%)
Query: 181 NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRG--SMCGAPARTVGWRDPG 238
+EM ++W + I +A VQ+ D + A T + G ++ G W+ G
Sbjct: 91 SEMMISWFTNGKIGDA--IVQFSESKSDLINYSANT---NNGVITVNGKSTTFSNWK--G 143
Query: 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 298
Y ++ L L P Y Y+ G +S+ I S F S +P + G K
Sbjct: 144 YSNSVVLTGLSPKTTYYYQCGG---SSSNILSQTNYFTTSNFPTTTTANTS---GKNVKS 197
Query: 299 EADGSNEYNDFQ---YASL-------NTTRQLIQDLKNIDIVFHIGDICYAN-GYISQ-- 345
+ + F YA + NT + + ++L ++ HIGDI YA+ + Q
Sbjct: 198 TTTDNFQVTPFTAAVYADMGYGGGYNNTVKVIEENLSKYSLILHIGDIAYADYNKVEQGN 257
Query: 346 ---WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402
W F +EPI S VPYM A GNH+ FY + F +P
Sbjct: 258 QTIWTNFLQALEPITSKVPYMTAPGNHD-------VFYSFNSY--------QNTFNMPGS 302
Query: 403 NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQP--WLIFLAHRVL 460
+ WYS DY F TE D T+QY++I++ L + R+K P W+I AHR
Sbjct: 303 SNQP-WYSYDYNGVHFLSYSTESDLAPFTQQYQWIKNDLETY-RKKNPSGWVIAYAHRPY 360
Query: 461 GYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 520
S+ + + + + ++ +L+Q Y VDI + GH H YERT P+YQ +
Sbjct: 361 YCSTQMDWCRKQTL-RALIESTIGELFQNYNVDIYLAGHTHAYERTVPVYQQSPIGTYE- 418
Query: 521 YYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSS 580
Y GT++ TI P + WS R + G+ +L +++++L+++
Sbjct: 419 YPGGTVHFTIGTPGNQEGLDHNWILPAPS-WSASRFGELGYGQLNVVNNTHILWQFLTDQ 477
Query: 581 DGKVYDSFRISRDYRD 596
++D I + Y D
Sbjct: 478 Q-VIFDEQWIVKGYFD 492
|
|
| DICTYBASE|DDB_G0285351 DDB_G0285351 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 273 (101.2 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 105/399 (26%), Positives = 174/399 (43%)
Query: 223 SMCGAPARTVGWRDPGY---IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279
S+ + A T+ + G+ +T ++ L + +Y Y VG ++ N WS Y F +
Sbjct: 80 SITSSTAETIYYDTEGFHSFTYTGLIENLSQSMIYFYCVGDKVTNQ---WSQLYNFTSRS 136
Query: 280 YPGQNS------LQRVVI------FGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNI 327
NS + VI FGDMG + D N +D+ Y ++N + + L
Sbjct: 137 DISDNSDSGSGGIDNEVIPFTSSWFGDMGYIDGDSLN--SDW-Y-TINNLKSISNQLS-- 190
Query: 328 DIVFHIGDICYAN--------GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSF 379
V H+GDI YA+ G + W+ F + I I ST+PYM GNH+ SF
Sbjct: 191 -FVTHVGDIAYADYSKDSKYYGNETIWNNFLSSINSITSTLPYMTTPGNHD-------SF 242
Query: 380 YGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEH 439
G E ++T + +P E+ + WYS DY F +E + ++Q+ +IE+
Sbjct: 243 ------GDEFSAYSKT-WQMPTEHHSNNWYSFDYNGVHFISISSEDTYIPLSDQHSWIEN 295
Query: 440 CLASVDRQKQP--WLIFLAHRVLGYSSGIFYAVDGSFAEPMGR----ESLQKLWQKYKVD 493
L R P WLI +HR ++ + D E + +SL+ L KY VD
Sbjct: 296 DLKQY-RNSNPNGWLIMYSHRPFYCNAKFGWCNDDYKDEKTSKRLYIDSLEYLLYKYNVD 354
Query: 494 IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSL 553
+ I GH H YE + P+YQN ++ K T++ I + P T L
Sbjct: 355 LFISGHCHAYETSKPVYQNEVMGTYQDP-KATVHCVIGTGGNKGGQIEEWYEPKPWTNGL 413
Query: 554 YRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 592
+ G+ L + + L +++ + + + D F +++
Sbjct: 414 KSSLN-GYALLNIINSTTLNWKFIANLNNSIIDEFYLNK 451
|
|
| FB|FBgn0030245 CG1637 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 266 (98.7 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 103/374 (27%), Positives = 158/374 (42%)
Query: 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKD 298
+IH L++L PNA Y+Y G S + WS+ +QF+ P + + I+GDMG +
Sbjct: 108 FIHRVTLRDLEPNATYSYHCG-----SDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNE 162
Query: 299 EADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICY-ANGYISQ-WDQFTAQIEPI 356
A SL +Q Q D + H+GD Y N ++ D+F QIE +
Sbjct: 163 NAQ-----------SLARLQQETQR-GMYDAIIHVGDFAYDMNTKNARVGDEFMRQIETV 210
Query: 357 ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMF 416
A+ +PYM+ GNHE + + N F +P F YS D G
Sbjct: 211 AAYLPYMVVPGNHEEKFN-----FSNY----------RARFSMPGGTENMF-YSFDLGPV 254
Query: 417 RFCVADTE--HDWREGTE----QYKFIEHCLASVD----RQKQPWLIFLAHRVLGYSSGI 466
F TE + G + Q++++ LA + R K+PW+I HR + Y S
Sbjct: 255 HFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWIILYGHRPM-YCSNE 313
Query: 467 FYAVDGSFAEPMGRES--------LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN-- 516
D + +E + R L+ L ++ VD+AI+ H H+YER PIY N
Sbjct: 314 -NDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAIWAHEHSYERLWPIYDYKVRNGT 372
Query: 517 -KEKNYYKGTLNGTIHXXXXXXXXXLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFE 575
K+ Y + I F WS + DYG+ +L A + +++ FE
Sbjct: 373 LKDSPYNDPSAPVHIVTGSAGCKEGREPFKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFE 432
Query: 576 Y-KKSSDGKVYDSF 588
+G + D F
Sbjct: 433 QVSDDKNGAIIDDF 446
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LMX4 | PPA1_ARATH | No assigned EC number | 0.7732 | 1.0 | 0.9983 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 2e-94 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 8e-23 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 5e-22 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 4e-16 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 2e-05 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 0.004 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 2e-94
Identities = 111/313 (35%), Positives = 158/313 (50%), Gaps = 30/313 (9%)
Query: 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ- 345
+ +FGDMG++ S NT L ++L N D + H+GD+ YA+GY +
Sbjct: 5 FKFAVFGDMGQN-----------TNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGS 53
Query: 346 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 404
WD F QIEP+AS VPYM+ GNHE D+ + + P+ +
Sbjct: 54 RWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFP-------RFRFPHSPSGST 106
Query: 405 AKFWYSTDYGMFRFCVADTEHDWR---EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLG 461
+ WYS D G F TE D+ G+ QY ++E LA VDR K PW+I + HR +
Sbjct: 107 SNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPM- 165
Query: 462 YSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 521
Y S + + R +L+ L+ KY VD+ + GHVH YERTCP+Y Y
Sbjct: 166 YCSNTDHDDCIEGEK--MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPY 223
Query: 522 YKGTLNGTIHVVAGGGGA--GLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKS 579
G +H+V G GG GL F+ WS +R+ DYGF +LT + ++L FE+ ++
Sbjct: 224 SNP--KGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRN 281
Query: 580 SDGKVYDSFRISR 592
DG V DSF I +
Sbjct: 282 DDGVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 8e-23
Identities = 92/352 (26%), Positives = 156/352 (44%), Gaps = 54/352 (15%)
Query: 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP--YPGQNSLQRVVIFGDM 295
G I+ + L PN +Y YK G +ST E+ F+ P +P + + GD+
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGP--SST----QEFSFRTPPSKFP-----IKFAVSGDL 148
Query: 296 GKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355
G E S ++ S + D+ GD+ YAN Y WD F ++P
Sbjct: 149 GTSEWTKST----LEHVSKW----------DYDVFILPGDLSYANFYQPLWDTFGRLVQP 194
Query: 356 IASTVPYMIASGNHERD-----WPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYS 410
+AS P+M+ GNHE + P + Y + M + + + + +YS
Sbjct: 195 LASQRPWMVTHGNHELEKIPILHPEKFTAYNAR----------WRMPFEESGSTSNLYYS 244
Query: 411 TDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 470
+ + + D+ G+EQY+++E+ L +DR+ PW++ + H Y+S A
Sbjct: 245 FNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSN--EAH 301
Query: 471 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTI 530
G +ES++ L K +VD+ GHVH YER +YQ T+K Y I
Sbjct: 302 QGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGK-TDKCGPVY-------I 353
Query: 531 HVVAGGGGAGLA-EFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSD 581
+ GG GLA ++ + SL+R+ +G +L D + + + + ++ D
Sbjct: 354 TIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDD 405
|
Length = 427 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 89.1 bits (222), Expect = 5e-22
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYD 586
+H+V G G GL F Q WS +RD DYG+ +LT + ++L +E+ +S DG V D
Sbjct: 1 KAPVHIVVGAAGNGLDPFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVLD 60
Query: 587 SF 588
SF
Sbjct: 61 SF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 76.7 bits (188), Expect = 4e-16
Identities = 36/218 (16%), Positives = 61/218 (27%), Gaps = 35/218 (16%)
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQ 345
R+++ GD+ L+ L++ L D+V +GD+ S
Sbjct: 1 RILVIGDLH------------GGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP-SL 47
Query: 346 WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRA 405
+ + P + GNH D+ S G
Sbjct: 48 EVLALLFALKLKAPGPVYLVRGNH--DFDSGNSELGFYL-------------ECAGLPYV 92
Query: 406 KFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSG 465
G + + G +F+E + I L H S
Sbjct: 93 LGNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHG--PLSPS 150
Query: 466 IFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503
+ D G E+L+ L + VD+ + GH H
Sbjct: 151 LDSGDDI---YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 63/321 (19%), Positives = 102/321 (31%), Gaps = 82/321 (25%)
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 347
R + GD G Q A ++ + D + +GD Y +G S D
Sbjct: 2 RFLALGDWGGG-------GTAGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDD 53
Query: 348 -QFTAQIEPI----ASTVPYMIASGNHERDWPGTGSF---YGNKDSGGECGVLAETMFYV 399
+F E + + VP+ + GNH D+ G S Y + + + +
Sbjct: 54 PRFETTFEDVYSAPSLQVPWYLVLGNH--DYSGNVSAQIDYTKRPNS--------PRWTM 103
Query: 400 PAENRAKFWYSTDY---------------------GMFRFCVADTEHDWREGTEQYKFIE 438
PA ++Y + + + EQ ++E
Sbjct: 104 PA-----YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLE 158
Query: 439 HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 498
LA+ W I + H + YSSG G + + L L +KYKVD + G
Sbjct: 159 KTLAAS---TADWKIVVGHHPI-YSSG----EHGPTSCL--VDRLLPLLKKYKVDAYLSG 208
Query: 499 HVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYR 555
H HN + + K +GT VV+G G + +S +
Sbjct: 209 HDHNLQ----------------HIKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFT 252
Query: 556 DYDYGFVKLTAFDHSNLLFEY 576
GF L L +
Sbjct: 253 SSGGGFAYLE-LTKEELTVRF 272
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 37.7 bits (87), Expect = 0.004
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370
+ + D V +GD+ +G + A + +P + GNH+
Sbjct: 18 EAALAAAEKPDFVLVLGDLVG-DGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.89 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.85 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.84 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.83 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.8 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.7 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.65 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.65 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.64 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.61 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.58 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.52 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.51 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.44 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.41 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.41 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.41 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.41 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.35 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.3 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.3 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.28 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.13 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.1 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.05 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.01 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.96 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.84 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.81 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.8 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.79 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.75 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.74 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.7 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.69 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.68 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.6 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.56 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.55 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.55 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.54 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.49 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.48 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.47 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.43 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.4 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.37 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.27 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.24 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.23 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.22 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.05 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.01 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.97 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.93 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.89 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.89 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.83 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.83 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.8 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.79 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.78 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.72 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.7 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.66 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.65 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.62 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.61 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.56 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.3 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.13 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.06 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.02 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.02 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.01 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.0 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.97 | |
| PHA02239 | 235 | putative protein phosphatase | 96.94 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.84 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 96.83 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.82 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.67 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 96.61 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.59 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.56 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.53 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.4 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.4 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.31 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.29 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.27 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.18 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.17 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.04 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 95.98 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.9 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.79 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 95.77 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.74 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 95.66 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 95.6 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.45 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 95.44 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.21 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.75 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.6 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.2 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 93.56 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.18 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 93.12 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 92.8 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 92.26 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 92.19 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 91.94 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 91.64 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.57 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 91.33 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 91.16 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 90.98 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 90.71 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 90.49 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.85 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 88.04 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 86.27 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 86.14 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 86.0 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 84.09 | |
| PF10179 | 300 | DUF2369: Uncharacterised conserved protein (DUF236 | 81.81 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 81.78 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-77 Score=627.61 Aligned_cols=400 Identities=41% Similarity=0.716 Sum_probs=331.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCcccc-CcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSP-AGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
..+.|+|+||++++..++|+|+|.|.+. ....|+||...+...... .+.. ..+|+.... +|+..|++|+|
T Consensus 41 ~~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~ 111 (452)
T KOG1378|consen 41 VVNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDA 111 (452)
T ss_pred cCCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeee
Confidence 3468999999999998899999999864 348999997654422221 1111 112333222 56789999999
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD 323 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 323 (612)
+|++|+|+|+||||||++ ..||++++|+|+| +++.+.+|+++||||...... ++.....+
T Consensus 112 ~~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~ 171 (452)
T KOG1378|consen 112 VMKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEE 171 (452)
T ss_pred eecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhc
Confidence 999999999999999985 3499999999998 455789999999999876421 23333333
Q ss_pred cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCC
Q 007233 324 LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
..++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 172 ~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~ 240 (452)
T KOG1378|consen 172 NLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGN 240 (452)
T ss_pred ccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCC
Confidence 34799999999999999998 6999999999999999999999999999876542 55789999999954
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcc-ccCCCCCCc
Q 007233 403 ---NRAKFWYSTDYGMFRFCVADTEHDW--REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-YAVDGSFAE 476 (612)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~--~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~-~~~~~~~~~ 476 (612)
...++|||||+|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||+.|+|+ |++... +..++.. +
T Consensus 241 ~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~ 318 (452)
T KOG1378|consen 241 SSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-E 318 (452)
T ss_pred cCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-h
Confidence 3456999999999999999999885 356899999999999999877999999999999 666542 3344432 2
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCC--CCCCCCCCCCccee
Q 007233 477 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLY 554 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~ 554 (612)
.+ |..||+||.+++||++|+||+|.|||+||++|.+|.......+..++.+||||++|.||+. +..+..++|+||+|
T Consensus 319 ~~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~ 397 (452)
T KOG1378|consen 319 SM-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAF 397 (452)
T ss_pred hh-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccc
Confidence 44 7899999999999999999999999999999999987666555568899999999999954 56666689999999
Q ss_pred eeCceeEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEeCCCCccccccCCCCC
Q 007233 555 RDYDYGFVKLTAFDHSNLLFEYKKS--SDGKVYDSFRISRDYRDILACTVGSCPS 607 (612)
Q Consensus 555 ~~~~~Gy~~l~v~n~~~l~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 607 (612)
|..+|||++|+++|+|++.++++++ .+|+++|+|||.|++.+...|....|.+
T Consensus 398 R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 398 REGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred ccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 9999999999999999999999985 3478999999999999999999988863
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-70 Score=589.12 Aligned_cols=378 Identities=25% Similarity=0.443 Sum_probs=309.6
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCc-ceEEecCCcCCCCccceeccCCCeEEE
Q 007233 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAG-TLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~-~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
+++..|+|+||++++ +++|+|+|.|... ..+.|+||++++....++.+ +.+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 578899999999997 8999999999864 46899999987765544433 3456521 123 3799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 322 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 322 (612)
|+|+||+|+|+|+||||.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998853 4699999999985421 1245666654
Q ss_pred hcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCC
Q 007233 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402 (612)
Q Consensus 323 ~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
.+||||||+||++|++++..+|+.|++.++++.+.+|+|+++||||.+... ....+...+|..+|.||.+
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999988899999999999999999999999999986321 0112234567789999953
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhh
Q 007233 403 ---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 479 (612)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (612)
...+.||||++|++|||+||++.++...++|++||+++|++++|+++||+||++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2457899999999999999999988888999999999999998888999999999999 87754322111 11234
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCC---CCCCCCCCCcceeee
Q 007233 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL---AEFTPLQTTWSLYRD 556 (612)
Q Consensus 480 r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 556 (612)
|+.|++||++++||++|+||+|.|||++|++++++ .+.||+||++|+||+.. ..+..++|+|++||.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 24799999999999864 345567899999999
Q ss_pred CceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCCCCcccc
Q 007233 557 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDYRDILAC 600 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~~~~~~~ 600 (612)
.+|||.+|++.|.++|++||+++.+|+ +.|+|||+|-... -+|
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~ 425 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGC 425 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-Ccc
Confidence 999999999999999999999977764 8999999997554 344
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=396.32 Aligned_cols=282 Identities=39% Similarity=0.692 Sum_probs=223.2
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch--hHHHHHHHhhhhhhcCCCe
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~s~vP~ 362 (612)
.++||+++||+|.... .+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~~-----------~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNTN-----------NSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCCC-----------CcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 4699999999997521 23567888877556899999999999988765 8999999999999999999
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecC---CCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP---AENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKF 436 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~W 436 (612)
|+++||||+.......+... ...++.++ .....+.||+|++|++|||+|||+... ....+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999875332111100 00012222 223467899999999999999998765 567899999
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceecc
Q 007233 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN 516 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~ 516 (612)
|+++|+++++.+.+|+||++|+|+ |++....... ...... ++.|++||++|+|+++|+||+|.|||++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~~-~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEKM-RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHHH-HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999987666799999999999 7764432111 011223 889999999999999999999999999999999886
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCC--CCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007233 517 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 592 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k 592 (612)
.......+++|++||++|+||+.++..... .++|+.++..++||++|++.++++|+++++.+.+|+|+|+|+|+|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222367899999999999988654332 358999999999999999988789999999999999999999987
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=293.44 Aligned_cols=270 Identities=18% Similarity=0.267 Sum_probs=189.5
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCc----hhHHHH-HHHhhhhhh--
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQ-FTAQIEPIA-- 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~-f~~~i~~l~-- 357 (612)
..++|+++||+|.+.. -|....+.|.++.++ .++|||+.+||+. .+|. +.+|+. |.+.+....
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996421 133333445555544 6899999999998 5553 456664 333333333
Q ss_pred cCCCeEEcCCCCccCCCCCCC--CCCCC----CCCC--cc--ccccceeeecCCCCCCceEEEE----Ee----------
Q 007233 358 STVPYMIASGNHERDWPGTGS--FYGNK----DSGG--EC--GVLAETMFYVPAENRAKFWYST----DY---------- 413 (612)
Q Consensus 358 s~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 413 (612)
-++||++++||||+..+.... .|... +.-. +- ......||.||. .||.+ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999985322110 11100 0000 00 001146899983 47754 21
Q ss_pred ---CCEEEEEEeCCCC---C--C-CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHH
Q 007233 414 ---GMFRFCVADTEHD---W--R-EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 484 (612)
Q Consensus 414 ---G~v~fi~Ldt~~~---~--~-~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (612)
..+.||++||... + . ....|++||+++|+.+ ++..+|+||++|||+ ||++.+.+ . ..+ +..|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~hg~-~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSSKG-D----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCCCC-C----HHH-HHHHH
Confidence 1289999999631 1 1 2468999999999754 356789999999999 99865421 1 234 78999
Q ss_pred HHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEE
Q 007233 485 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKL 564 (612)
Q Consensus 485 ~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 564 (612)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999974 2478999999988764332 2346788888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEeCCCCc
Q 007233 565 TAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDI 597 (612)
Q Consensus 565 ~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~~ 597 (612)
++ +.+.|+++|+.+.+|++++++++.|+.+..
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~ 334 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKL 334 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhh
Confidence 98 889999999966899999999998876643
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-31 Score=271.04 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=175.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch----hHHH-HHHHhhhhhhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~----~~wd-~f~~~i~~l~s~vP 361 (612)
++|+++||+|.... ..|......+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~-------~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGT-------AGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCC-------HHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 48999999997521 1122333445555554 6899999999999988742 3343 45555555556899
Q ss_pred eEEcCCCCccCCCCCCC-CCCCCCCCCccccccceeeecCCCCCCceEEEEEeC------CEEEEEEeCCCCC-------
Q 007233 362 YMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG------MFRFCVADTEHDW------- 427 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 427 (612)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986311100 0000 0012334444 468999998 7999999998531
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecC
Q 007233 428 --------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 499 (612)
Q Consensus 428 --------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH 499 (612)
..+.+|++||+++|+++ +.+|+||++|+|+ ++..... . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~~---~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEHG---P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCCC---C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3389999999999 7653321 1 1223 78999999999999999999
Q ss_pred cccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC---CCCCcceeeeCceeEEEEEEecCCeEEEEE
Q 007233 500 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYRDYDYGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 500 ~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~ 576 (612)
+|.+++..+. ..++.||++|+||........ ..++|..++...+||++|++ ++++|+++|
T Consensus 210 ~H~~~~~~~~----------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKDD----------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeecC----------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 9999988531 248899999998876533321 23468888889999999999 678999999
Q ss_pred EECCCC
Q 007233 577 KKSSDG 582 (612)
Q Consensus 577 ~~~~dG 582 (612)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=235.39 Aligned_cols=240 Identities=17% Similarity=0.169 Sum_probs=161.4
Q ss_pred CCeEEEEEeecCCCCCCCCCcc--cccccchHHHHHHHHHh----cCCccEEEEeCcccccCCch----hHHHHHHHhhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEY--NDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 354 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~--~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~----~~wd~f~~~i~ 354 (612)
.+++|++++|+|.+........ ..| ......++++++. .++||||+++||+++..... .+|+.|.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 3699999999999864322111 111 1122334444333 24899999999999765432 45667777777
Q ss_pred hhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC------C
Q 007233 355 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW------R 428 (612)
Q Consensus 355 ~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 428 (612)
.+...+|+++++||||........ ...+|. ...+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~--------------~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEE--------------SIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChh--------------HHHHHH---HHhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 666689999999999985321100 001111 01124578999999999999997532 1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC--CCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 429 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG--SFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 429 ~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~--~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
...+|++||+++|+++.+.+.+++||++|+|+ +..... ..+. ...... +++|.++|++++|+++|+||+|.+++.
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~-~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSV-RKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHH-HHHHHHHHHhcCceEEEECccccCCce
Confidence 24799999999999875445678999999999 643221 1111 111122 789999999999999999999998764
Q ss_pred cccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 507 CPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 507 ~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
. .+++.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 222 ~------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 222 R------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred E------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 2 14677888887775421 13479999999 6778899987
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=221.94 Aligned_cols=259 Identities=21% Similarity=0.322 Sum_probs=167.7
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-HHHHhhhhhhc---
Q 007233 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 358 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~s--- 358 (612)
++..++|+++||+|.... |+ |......+..|.++ .++||||.+||++|++|...+.| +|.+.++.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995432 21 22223344455543 68999999999999999876666 45555665543
Q ss_pred -CCCeEEcCCCCccCCCCCC---CCCCCCCCCCccccccceeeecCCCCCCceEE--E----EEeCCEEEEEEeCCC---
Q 007233 359 -TVPYMIASGNHERDWPGTG---SFYGNKDSGGECGVLAETMFYVPAENRAKFWY--S----TDYGMFRFCVADTEH--- 425 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y--s----fd~G~v~fi~Ldt~~--- 425 (612)
+.|||.+.||||+..+-.. ..|.. ...||..|.. || + +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~----------~d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRK----------IDKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHh----------hccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 5799999999999743211 01111 1234443311 11 0 001122333333221
Q ss_pred ----CCCC-------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007233 426 ----DWRE-------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 426 ----~~~~-------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
+|.. ...|+.||+..|++ +.++|+||++|||+ .+.+.+ + .. ...+++|.|||+.++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~H-G---~T--~eL~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGHH-G---PT--KELEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhcc-C---Ch--HHHHHHHHHHHHhcCCcE
Confidence 1211 25788999999998 67899999999998 665432 3 21 223899999999999999
Q ss_pred EEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCc----ceeeeCceeEEEEEEecCC
Q 007233 495 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTW----SLYRDYDYGFVKLTAFDHS 570 (612)
Q Consensus 495 vlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w----s~~~~~~~Gy~~l~v~n~~ 570 (612)
+++||+|+.|..- .++.++.+++.+||++...-...+|.| ..|....-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis-----------------~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHIS-----------------SPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhcc-----------------CCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 9999999999873 223445555555565542222223333 345555669999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEeC
Q 007233 571 NLLFEYKKSSDGKVYDSFRISRD 593 (612)
Q Consensus 571 ~l~~~~~~~~dG~v~D~f~i~k~ 593 (612)
.+++.|+ +..|+++.+....|.
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 789999998776554
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=203.79 Aligned_cols=229 Identities=15% Similarity=0.209 Sum_probs=150.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998753210000 01112334444432 2489999999999964 4456677777777766 79999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEH 439 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 439 (612)
.++||||.... ...++. ... ......+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-MRAVFP-------------ELP----PAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-HHHhhc-------------ccc----ccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 001110 000 01234578999999999999987532 135789999999
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCC
Q 007233 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKE 518 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~ 518 (612)
.|++.. ..++|+++|+|+ +......... .... .++++.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999863 345889999998 5442211111 1111 277999999999 99999999999976542
Q ss_pred CccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecC
Q 007233 519 KNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDH 569 (612)
Q Consensus 519 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~ 569 (612)
.+|+.++++|+.|..+.. .++...+....+||..+.++++
T Consensus 199 -------~~g~~~~~~gs~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFAP----DLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred -------ECCEEEEEcCcceeeecC----CCCcccccccCCCCcEEEEecC
Confidence 257888899987765421 2333344456789998887543
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.9e-22 Score=202.59 Aligned_cols=207 Identities=21% Similarity=0.250 Sum_probs=135.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s~vP~ 362 (612)
|||++++|+|....+.... .+...+...++++++++ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6999999999664321100 11122334445555442 469999999999954432 14555555555544 5899
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC----------------
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD---------------- 426 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 426 (612)
++++||||........ + . . +.....+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~~-~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSREY-L-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHhh-h-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 9999999986321100 0 0 0 1111234568999999999999999531
Q ss_pred ------------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHH
Q 007233 427 ------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 488 (612)
Q Consensus 427 ------------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~ 488 (612)
.....+|++||+++|+++.. +..++||++|+|+ +.... ..... ... ++.+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~--~~~-~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGL--LWN-HEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Ccccc--ccC-HHHHHHHHH
Confidence 02347999999999998643 3345899999998 65432 11111 111 678999999
Q ss_pred hc-CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCC
Q 007233 489 KY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 539 (612)
Q Consensus 489 k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 539 (612)
++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 213 ~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 213 AYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred hCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 95 89999999999987432 25788888886543
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=213.20 Aligned_cols=310 Identities=17% Similarity=0.295 Sum_probs=148.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHH
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 316 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~ 316 (612)
..+.+++.++||+|+|+|+||+... +....|+.++|+|+|... ...+||++++|.+... +..+.
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123347899999996533 3459999999997532 12456
Q ss_pred HHHHHHhcCCccEEEEeCcccccCCc-----------------------hhH----HHHHH--HhhhhhhcCCCeEEcCC
Q 007233 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQFT--AQIEPIASTVPYMIASG 367 (612)
Q Consensus 317 ~~~i~~~~~~pDfvl~~GDi~Y~~g~-----------------------~~~----wd~f~--~~i~~l~s~vP~~~v~G 367 (612)
++.+++. .+|||+||+||++|+++. ... |..+. ..++.+.+++|++.++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 479999999999999852 111 22221 23566778999999999
Q ss_pred CCccCCCCCCCCCCCCCCCCccc-------cccceee-ecCC------CCCCceEEEEEeCC-EEEEEEeCCCCCC----
Q 007233 368 NHERDWPGTGSFYGNKDSGGECG-------VLAETMF-YVPA------ENRAKFWYSTDYGM-FRFCVADTEHDWR---- 428 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g-------~~~~~~f-~~P~------~~~~~~~Ysfd~G~-v~fi~Ldt~~~~~---- 428 (612)
+||+..+..+. ...... ...+ ..++..+ .+|. ......|++|++|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~-~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~ 280 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQ-DTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC 280 (453)
T ss_dssp STTTSTT-BTT-B-STT----HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CC
T ss_pred CceecccccCC-cccccc-ccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccc
Confidence 99995321100 000000 0000 0001111 1332 12356789999999 9999999985321
Q ss_pred -----------------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcc-------ccCCCCCCchhhHHHHH
Q 007233 429 -----------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-------YAVDGSFAEPMGRESLQ 484 (612)
Q Consensus 429 -----------------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~-------~~~~~~~~~~~~r~~l~ 484 (612)
.|.+|.+||++.|++ +.++|+|+..-.|+ ...... ...+..-.-+..|++|.
T Consensus 281 ~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll 356 (453)
T PF09423_consen 281 DGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLL 356 (453)
T ss_dssp CSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHH
T ss_pred cccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHH
Confidence 268999999999998 56899999988876 222110 01111000112388999
Q ss_pred HHHHhcCCe--EEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCC---CCCCCCCCC------CCCCCcce
Q 007233 485 KLWQKYKVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG---GGAGLAEFT------PLQTTWSL 553 (612)
Q Consensus 485 ~l~~k~~Vd--lvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~---gG~~l~~~~------~~~~~ws~ 553 (612)
.+|.+.++. ++|+|.+|...-..--.+..-... ......+-+++++ +|..+.... ....++..
T Consensus 357 ~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~------~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~ 430 (453)
T PF09423_consen 357 DFLRESGIRNVVFLSGDVHASAASRIPPDDADPPD------GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLK 430 (453)
T ss_dssp HHHHHTT---EEEEE-SSSSEEEEEEESSTT---T------TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEE
T ss_pred HHHHhhCCCCEEEEecCcchheeeecccccccccC------CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceE
Confidence 999988875 889999999765532111100000 0001123344443 111100000 01123444
Q ss_pred eee-CceeEEEEEEecCCeEEEEE
Q 007233 554 YRD-YDYGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 554 ~~~-~~~Gy~~l~v~n~~~l~~~~ 576 (612)
|.+ ..+||+.|++ +...++.+|
T Consensus 431 ~~~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 431 FADLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp EEE-B-EEEEEEEE-ETTEEEEEE
T ss_pred EeECCCCcEEEEEE-ccceEEEEC
Confidence 543 6899999999 788888775
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=186.48 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=142.0
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----hcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCC
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~v 360 (612)
..+||+.++|+|...... .... .......++++++ ...+|||||++||++. ++...+++.+.+.++.+ .+
T Consensus 13 ~~~~i~~iSD~Hl~~~~~-~~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~~~l~~l--~~ 86 (275)
T PRK11148 13 ARVRILQITDTHLFADEH-ETLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFAEGIAPL--RK 86 (275)
T ss_pred CCEEEEEEcCcccCCCCC-Ccee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHHHHHhhc--CC
Confidence 459999999999743211 1100 0111233444443 3347999999999995 45566777777777766 68
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHH
Q 007233 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKF 436 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~W 436 (612)
|+++++||||..... ..++ +.......++.+..++++||+|||.... ..+.+|++|
T Consensus 87 Pv~~v~GNHD~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 87 PCVWLPGNHDFQPAM-YSAL-------------------QDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred cEEEeCCCCCChHHH-HHHH-------------------hhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 999999999974210 0000 0000111123344456999999996432 235899999
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceec
Q 007233 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICT 515 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~ 515 (612)
|+++|++. .+.+-+|++.|+|+ .....|... ... . ..++|.++++++ +|+++|+||+|.....
T Consensus 147 L~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~-~~l--~-n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--------- 210 (275)
T PRK11148 147 LERKLADA--PERHTLVLLHHHPL-PAGCAWLDQ-HSL--R-NAHELAEVLAKFPNVKAILCGHIHQELDL--------- 210 (275)
T ss_pred HHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhc-cCC--C-CHHHHHHHHhcCCCceEEEecccChHHhc---------
Confidence 99999986 23342444445565 322222111 111 1 167999999998 8999999999985432
Q ss_pred cCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 516 NKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 516 ~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
..+|+.++++++.+..... ..... .+.....||..+++.+++.+..+.++
T Consensus 211 ---------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 211 ---------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred ---------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 1257777777766643211 11111 11233468888888555556655554
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=194.40 Aligned_cols=297 Identities=21% Similarity=0.306 Sum_probs=187.3
Q ss_pred eeeecCCCCCcEEEEEEeCCC--CC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 172 PRLAQGKTWNEMTVTWTSGYG--IN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 172 ~~La~~~~~~~m~V~W~t~~~--~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.-++.|+-...-.|-|+--.+ .+ +....+||++.+.....+..++.. .+ .+..+.+++.++
T Consensus 41 ~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~~~ 106 (522)
T COG3540 41 HGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVDLR 106 (522)
T ss_pred cccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEecc
Confidence 334556655555666764221 00 234566666655433222222111 11 124688999999
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN 326 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 326 (612)
||+|++.|+||+... ..-|..++|||+|.++. .++|+.+||..+.. |+.+-..+.+.|.+ .+
T Consensus 107 gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~--~i~~~~fa~ascQ~---------~~~gy~~aY~~ma~--~~ 168 (522)
T COG3540 107 GLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGR--AIRFVWFADASCQG---------WEIGYMTAYKTMAK--EE 168 (522)
T ss_pred CCCCCceEEEEEeeC-----CccccccccccCCCCCC--cchhhhhhhccccc---------cccchhHHHHHHHh--cC
Confidence 999999999999875 22378999999998765 47888888886643 44455667777776 57
Q ss_pred ccEEEEeCcccccCCchh-----------------------------HHHHHH--HhhhhhhcCCCeEEcCCCCccCCCC
Q 007233 327 IDIVFHIGDICYANGYIS-----------------------------QWDQFT--AQIEPIASTVPYMIASGNHERDWPG 375 (612)
Q Consensus 327 pDfvl~~GDi~Y~~g~~~-----------------------------~wd~f~--~~i~~l~s~vP~~~v~GNHD~~~~~ 375 (612)
|||+||.||.+|+.|-.. +|..++ +.++...+..|+++.+..||...+-
T Consensus 169 ~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~ 248 (522)
T COG3540 169 PDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNW 248 (522)
T ss_pred CCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccc
Confidence 999999999999976321 121111 1244556689999999999986321
Q ss_pred CCCCCCCCCC-CCccc------cccceee-ecCCCC-----CCceEEEEEeCC-EEEEEEeCCCCCC-------------
Q 007233 376 TGSFYGNKDS-GGECG------VLAETMF-YVPAEN-----RAKFWYSTDYGM-FRFCVADTEHDWR------------- 428 (612)
Q Consensus 376 ~~~~y~~~ds-gge~g------~~~~~~f-~~P~~~-----~~~~~Ysfd~G~-v~fi~Ldt~~~~~------------- 428 (612)
... -...|+ -.+.. .+++..+ .||-.. ....|.+|.||+ +.|.+||++.+..
T Consensus 249 ~~~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q 327 (522)
T COG3540 249 SNS-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQ 327 (522)
T ss_pred ccc-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhh
Confidence 100 000011 11100 0111111 355321 257899999999 6899999986431
Q ss_pred ---------CCHHHHHHHHHHHhhccCCCCCEEEEEEeccccc---CCC-----ccccCCCCCCchhhHHHHHHHHHhcC
Q 007233 429 ---------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGY---SSG-----IFYAVDGSFAEPMGRESLQKLWQKYK 491 (612)
Q Consensus 429 ---------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~y---ss~-----~~~~~~~~~~~~~~r~~l~~l~~k~~ 491 (612)
.|..|.+||++.|.+ +++.|.|+..-.||.- ... .....++.-....+|+.|...+++.+
T Consensus 328 ~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~ 404 (522)
T COG3540 328 AVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRK 404 (522)
T ss_pred hhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcC
Confidence 268999999999998 7899999888877621 000 00011121223456999999999988
Q ss_pred Ce--EEEecCcccce
Q 007233 492 VD--IAIYGHVHNYE 504 (612)
Q Consensus 492 Vd--lvlsGH~H~Ye 504 (612)
+. ++|+|.+|.-.
T Consensus 405 ~~N~V~LtgDvH~~w 419 (522)
T COG3540 405 IRNTVVLTGDVHYSW 419 (522)
T ss_pred CCCcEEEechhHHHH
Confidence 76 89999999744
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=183.26 Aligned_cols=195 Identities=15% Similarity=0.183 Sum_probs=121.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCC--------chhHHHHHHHhhhhhhc--
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g--------~~~~wd~f~~~i~~l~s-- 358 (612)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122233333 57999999999995431 24678888887765433
Q ss_pred CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC----------CC
Q 007233 359 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WR 428 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 428 (612)
..|++.++||||....... +... ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~~~---~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DSEN---NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cchh---hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998421100 0000 011111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecc
Q 007233 429 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCP 508 (612)
Q Consensus 429 ~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p 508 (612)
...+|++||++.|++. .+.+++||++|+|+ +..... . ... ...+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~----~---~~~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP----S---AKS-SSKFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC----C---cch-hHHHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34568999999998 442111 1 111 22499999999999999999999999666
Q ss_pred c
Q 007233 509 I 509 (612)
Q Consensus 509 ~ 509 (612)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-19 Score=175.13 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=112.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhh-cCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~-s~vP~~ 363 (612)
|||++++|+|..... ........++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999975421 0111123445555543 579999999999965544678999999888876 579999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCC-CCCchhhHHHHHHHHHhc-CCeEEEecCcccceeec
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTC 507 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~ 507 (612)
. +..++|+++|+|+ +....+..... ......+++.|++|++++ +|+++|+||+|.+.+..
T Consensus 104 ~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 104 H---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 5 2345999999998 65433211100 000112356789999998 79999999999998875
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-16 Score=164.00 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=116.1
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCchh--------HHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCC
Q 007233 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSG 386 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~--------~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsg 386 (612)
++++.+.+...+|||||++||++....... .+..+++.++.....+|+++++||||....+.... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 455555554468999999999996654221 24556666777778999999999999863221110 0000
Q ss_pred Cccccccceeee--cCCC----CCCceEEEEE-eCCEEEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCC
Q 007233 387 GECGVLAETMFY--VPAE----NRAKFWYSTD-YGMFRFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQK 448 (612)
Q Consensus 387 ge~g~~~~~~f~--~P~~----~~~~~~Ysfd-~G~v~fi~Ldt~~~~-----------~~~~~Q~~WL~~~La~~~r~~ 448 (612)
..........|. +|.+ -....||+++ .++++||+|||.... ....+|++||+++|+++.+.+
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 000000011111 2211 1245688888 899999999997432 124789999999999875333
Q ss_pred CCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccceee
Q 007233 449 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYERT 506 (612)
Q Consensus 449 ~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~YeR~ 506 (612)
..++|++|+|+ +..... . . ...+++|.+++++|+ |.++|+||+|..+..
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 44888999998 433211 0 0 122789999999997 788999999997755
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-15 Score=146.76 Aligned_cols=166 Identities=14% Similarity=0.199 Sum_probs=102.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchh-HHHHHHHhhhhhhc-CCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~-~wd~f~~~i~~l~s-~vP~~ 363 (612)
.+||++++|+|....................+.++++. .+||+||++||+++...... .+..+.+.++++.. .+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876421100000111223445555554 68999999999997665432 23444444455433 79999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+++||||.. -....+|.+||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCEEEEEEecccccCCCc-cc------cC--CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007233 444 VD--RQKQPWLIFLAHRVLGYSSGI-FY------AV--DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 444 ~~--r~~~pwvIv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
.. +....+.+++.|+|+ ..... |. +. +...........+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 223456999999997 43321 11 00 1010011112334444466799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-16 Score=144.63 Aligned_cols=197 Identities=19% Similarity=0.201 Sum_probs=99.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHH-HhhhhhhcCCCeEEc
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~-~~i~~l~s~vP~~~v 365 (612)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 699999999976421 000 1122233332 378999999999998776554444322 223344568999999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCC--CCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA--ENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~--~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+||||+......... .............. ...... .........+..............+..|+...+..
T Consensus 72 ~GNHD~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (200)
T PF00149_consen 72 LGNHDYYSGNSFYGF-------YDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLL 143 (200)
T ss_dssp E-TTSSHHHHHHHHH-------HHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHH
T ss_pred ccccccceecccccc-------ccccccccccccccccccCcce-eeecccccccccccccccccccccchhcccccccc
Confidence 999998531100000 00000000000000 000000 11222222222222211111122222333322222
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
..+...+++||++|+|+ ++........ ......++.+..++++++|+++|+||+|.|
T Consensus 144 ~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 144 LEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22245678999999999 6553321100 001123789999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-15 Score=152.72 Aligned_cols=161 Identities=19% Similarity=0.206 Sum_probs=102.0
Q ss_pred CCccEEEEeCcccccCCc---hhHHH----HHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceee
Q 007233 325 KNIDIVFHIGDICYANGY---ISQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMF 397 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~---~~~wd----~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
.+||+||++||++.. |. ..+|. +|.+.+.++...+|++.++||||+.+..... . ..-..|...|
T Consensus 44 l~PD~vv~lGDL~d~-G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~F 114 (257)
T cd08163 44 LKPDSTIFLGDLFDG-GRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYF 114 (257)
T ss_pred cCCCEEEEecccccC-CeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHh
Confidence 579999999999954 43 24454 3344444433358999999999985422100 0 0001122233
Q ss_pred ecCCCCCCceEEEEEeCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC
Q 007233 398 YVPAENRAKFWYSTDYGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG 472 (612)
Q Consensus 398 ~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~ 472 (612)
. ...|+|++|+++||+||+.... ....+|.+||++.|+... ...| +|+++|+|+ |....- .++
T Consensus 115 g-------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~~--~cg 182 (257)
T cd08163 115 G-------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPNT--SCG 182 (257)
T ss_pred C-------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCCC--CCC
Confidence 1 2247899999999999996421 234679999999998742 2344 899999999 644221 111
Q ss_pred C---------------CCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 473 S---------------FAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 473 ~---------------~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
. +...+..+.-..||++.++.+||+||+|.|=..
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 0 000111345567888889999999999998554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.1e-15 Score=147.96 Aligned_cols=201 Identities=18% Similarity=0.253 Sum_probs=118.6
Q ss_pred EEEEeecCCCCC--CCCCcccccccchHHHHHHHHH---h-cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007233 289 VVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 289 f~v~GD~g~~~~--~~~~~~~~~~~~~~~~~~~i~~---~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
+.+++|+|.... .+.+. +.....+.++++.+ . ..+||+|+++||+++. +...+....++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~---~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDV---FGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCcc---cCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 468899997742 11112 22222334444433 2 2489999999999943 3223333334444433 3588
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC-CceEEEEEeCCEEEEEEeCCC----CC----------
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR-AKFWYSTDYGMFRFCVADTEH----DW---------- 427 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~----~~---------- 427 (612)
++++||||+.......+ ... ++.... -..-.++.++++.|++++... .+
T Consensus 75 ~~V~GNHD~~~~~~~~~--------------~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSASKL--------------RKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHHHH--------------HHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 99999999731110000 000 000000 000134567889999876311 11
Q ss_pred CC---CHHHHHHHHHHHhhccCCC-CCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007233 428 RE---GTEQYKFIEHCLASVDRQK-QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 428 ~~---~~~Q~~WL~~~La~~~r~~-~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
.. ..+|++||++.|+++.... ..++|++.|+|+ +.... ..+.+.+++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 00 2568999999999864222 246999999998 54321 1447788999999999999999999
Q ss_pred eeecccccceeccCCCccccCCCCceEEEEeCCC
Q 007233 504 ERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGG 537 (612)
Q Consensus 504 eR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 537 (612)
++..|+... .+|+.|+++.++
T Consensus 206 ~~~~~~~~~-------------~~gi~~~~~~~~ 226 (232)
T cd07393 206 GRDRAINGE-------------RGGIRYQLVSAD 226 (232)
T ss_pred cccccccce-------------ECCEEEEEEcch
Confidence 998876432 256777776653
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-13 Score=146.09 Aligned_cols=98 Identities=20% Similarity=0.182 Sum_probs=71.6
Q ss_pred CceEEEEE-eCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCC-CCch
Q 007233 405 AKFWYSTD-YGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS-FAEP 477 (612)
Q Consensus 405 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~-~~~~ 477 (612)
+..||+|+ .++++||+|||.... ....+|++||+++|++. +.+++||++|||+ ++.......... -...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 899999999997431 23589999999999973 4457999999998 654321110000 0001
Q ss_pred hhHHHHHHHHHhc-CCeEEEecCcccceee
Q 007233 478 MGRESLQKLWQKY-KVDIAIYGHVHNYERT 506 (612)
Q Consensus 478 ~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~ 506 (612)
...++|.++|++| +|.++|+||.|.-..+
T Consensus 366 ~n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 366 HLGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred cCHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 1156899999998 8999999999987654
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-14 Score=113.91 Aligned_cols=62 Identities=37% Similarity=0.777 Sum_probs=42.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007233 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSF 588 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f 588 (612)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=129.73 Aligned_cols=168 Identities=17% Similarity=0.207 Sum_probs=100.8
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCC
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GN 368 (612)
|+++||+|.+.. .+.. ..++ ..++|+|+++||+++.. .......+ +.++.+ .+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~~--~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLAI--GVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHhc--CCCEEEEcCC
Confidence 578999996521 1111 2222 26899999999999543 33333333 344332 6899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHHh
Q 007233 369 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------WREGTEQYKFIEHCLA 442 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~~~~Q~~WL~~~La 442 (612)
||.... ..... .....+ .+ ..+.++++.|+++++... .....+|++|+ +.|+
T Consensus 62 HD~~~~-----~~~~~---------~~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEI-----LGLLT---------SAGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHH-----HHhhh---------cCcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 997421 00000 000111 01 235678899999987432 12346889998 4444
Q ss_pred hccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 443 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 443 ~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
. .+.+.+|+++|+|+ +.... ..... ....+.+.+.+++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~~~--d~~~~-~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGTAV--DRVSG-GFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCCcc--cccCC-CCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 23345899999998 55311 10000 011236789999999999999999999853
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=130.07 Aligned_cols=185 Identities=20% Similarity=0.238 Sum_probs=102.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
||++++|+|.... .+ .+ .+.++++++.. .++|+|+++||++... .+...+++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~---~~--~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF---DT--EEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC---CH--HHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 11 12233333321 5799999999999532 2223455554442 46899999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC-------------------
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------------------- 426 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 426 (612)
+||||+........+ ...+. + ....+.++.+..++++|++++--.+
T Consensus 68 ~GNHD~~~~~~~~~~-------------~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLTYEEI-------------ESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCCHHHH-------------Hhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 999997421100000 00000 0 0001112223335677777662111
Q ss_pred -------C--C---CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC-CC---CchhhHHHHHHHHHhc
Q 007233 427 -------W--R---EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SF---AEPMGRESLQKLWQKY 490 (612)
Q Consensus 427 -------~--~---~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~l~~k~ 490 (612)
. . ...+|++||++.|++.. ..+ +|+++|+|+ .......+.+. .+ ....+...|.++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 1 0 12678999999998752 334 888889887 32110000000 00 0112357899999999
Q ss_pred CCeEEEecCcccce
Q 007233 491 KVDIAIYGHVHNYE 504 (612)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (612)
+|+++|+||.|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999854
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.2e-12 Score=130.48 Aligned_cols=184 Identities=19% Similarity=0.270 Sum_probs=115.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||+.++|.|..... ......+.++++++ .+||+||++||+++. |...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999988310 01223444444432 578999999999965 777777777777775555789999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEe-CCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007233 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHDW----REGTEQYKFIEH 439 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 439 (612)
++||||....+...+ ...+.. ....+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEAF--------------SDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHHh--------------hhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 999999864322110 000100 0011111122 67899999997542 346899999999
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccc
Q 007233 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNY 503 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~Y 503 (612)
.|++........+|+++|+|+ ........ .. .......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~--~~--~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVD--RV--ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCccc--ee--eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221124677777776 43322211 11 0111456777888887 999999999986
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.4e-12 Score=132.75 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=66.5
Q ss_pred CceEEEEE-eCCE--EEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCc----
Q 007233 405 AKFWYSTD-YGMF--RFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI---- 466 (612)
Q Consensus 405 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~---- 466 (612)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.+++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5845 99999987511 135899999999999874 25688899999988 54211
Q ss_pred -ccc-C-C--CCCCchhhHHHHHHHHHhc-CCeEEEecCcccc
Q 007233 467 -FYA-V-D--GSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNY 503 (612)
Q Consensus 467 -~~~-~-~--~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~Y 503 (612)
|.. . . ........-.+|..+|++| +|.++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 110 0 0 0011111124899999998 7999999999963
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-12 Score=128.39 Aligned_cols=198 Identities=17% Similarity=0.170 Sum_probs=110.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+...+|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 01123333332 157999999999996544322 345556666666799999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007233 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 444 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~ 444 (612)
++||||+......... + ......+.+- .+.+..++.++..+.++--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000001110 1223445666544433321111 12345666777664
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccce--eccC---CC
Q 007233 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI--CTNK---EK 519 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~--~~~~---~~ 519 (612)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|..... |... ..
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~ 187 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDY 187 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEeccccccccchhhcCcccc
Confidence 34456999999985 1 111 156799999999999999877765431 1111 11
Q ss_pred ccccCCCCceEEEEeCCCCC
Q 007233 520 NYYKGTLNGTIHVVAGGGGA 539 (612)
Q Consensus 520 ~~y~~~~~g~vyiv~G~gG~ 539 (612)
..|. ..+..+||..|.|..
T Consensus 188 G~~~-~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 188 GLYR-KGGSQLYVSRGLGTW 206 (223)
T ss_pred eEEE-ECCEEEEEcCCccCC
Confidence 1121 234567777766543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-12 Score=119.11 Aligned_cols=125 Identities=18% Similarity=0.289 Sum_probs=83.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcC-CCeEEc
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~-vP~~~v 365 (612)
|+.++|.|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0111112223322 2579999999999965 4456777777777776544 699999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
|+++|+|+ +..... .... . ..++.+.+++++++++++|+||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~---~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L---LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C---CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899998 444221 1111 1 12678999999999999999999996543
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-11 Score=119.04 Aligned_cols=174 Identities=14% Similarity=0.177 Sum_probs=102.6
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......+...+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999954 23344444432 57999999999996542344444555555433 57999
Q ss_pred EcCCCCccCCCCC-CCCCCCCCCCCccccccceeeecCC-CCCCceEEEEEe-CCEEEEEEeCCCCC--CCCHHHH----
Q 007233 364 IASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDY-GMFRFCVADTEHDW--REGTEQY---- 434 (612)
Q Consensus 364 ~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~~~~Q~---- 434 (612)
+++||||...... ...|+. ....|. -..... ...+ |++.|++++-.... ....+|.
T Consensus 67 ~V~GNhD~~v~~~l~~~~~~-------------~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 67 YVPGPQDAPLWEYLREAYNA-------------ELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred EEcCCCChHHHHHHHHHhcc-------------cccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 9999999630000 000000 000010 000111 1344 66999999865432 2234442
Q ss_pred HHHHH-HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007233 435 KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 501 (612)
Q Consensus 435 ~WL~~-~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H 501 (612)
.||.+ .|+...+...+..|+++|+|+ |..+. ...+...+..++++++..++++||.|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 222221122345899999999 76621 12346799999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=117.52 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=84.8
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCC
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GN 368 (612)
|++++|+|.+.... ...+.+.. ...++|+|+++||+++... ..++.. .........|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~-~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFP-IAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccC-CCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 00111111 1267999999999996432 222222 22233457899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007233 369 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~ 448 (612)
||+.. +|. ....||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~-----G~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII-----GTTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE-----eeecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 00123333211 1244555555443
Q ss_pred CCEEEEEEecccccCCCc-cccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 449 QPWLIFLAHRVLGYSSGI-FYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 449 ~pwvIv~~H~P~~yss~~-~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+.+|+++|+|+ +.... +....+.. ....++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCc-chhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23899999998 55432 11111111 11225668888889999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.6e-11 Score=119.46 Aligned_cols=197 Identities=12% Similarity=0.099 Sum_probs=107.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHhhhhhh-cCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~-s~vP~~ 363 (612)
||++++|+|.+.......-........++++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999985421110000011123455555543 257999999999996543 2334556666666654 479999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeec--CCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV--PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L 441 (612)
+++||||....... +... ......... ...........++.+++.|+.++..... ....+.+++++.+
T Consensus 81 ~~~GNHD~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSPL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998642210 0000 000000000 0001112223345556888888754321 1123444555555
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
... .+....|++.|.|+ ...... .. .. .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 543 34556999999997 332111 00 00 11233445678899999999999764
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.2e-11 Score=121.67 Aligned_cols=170 Identities=16% Similarity=0.215 Sum_probs=95.2
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
.++||++++|+|.+... + ...++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 1 1123333322 26899999999999622 223345666777777667899
Q ss_pred EEcCCCCccCCCCCC-CCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHH
Q 007233 363 MIASGNHERDWPGTG-SFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGM--FRFCVADTEHDWREGTEQYKFIEH 439 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q~~WL~~ 439 (612)
++++||||+...... ..+.. .-.+.|+ .+ ..+....+..++ +.+++++.. +. +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~~--~l~~~gi------~l----L~n~~~~i~~~~~~i~i~G~~d~--~~-~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIGE--TLKSAGI------TV----LFNQATVIATPNRQFELVGTGDL--WA-GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHHH--HHHhcCc------EE----eeCCeEEEeeCCcEEEEEEecch--hc-cCCC---hhH
Confidence 999999997421100 00000 0000010 01 012234455443 566677532 11 1111 111
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeccccc
Q 007233 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 511 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~ 511 (612)
.++ ++. ..|++.|.|- + . +.+.+.++||+|+||+|.-|-..|..+
T Consensus 178 ~~~----~~~-~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE----ANL-PRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC----CCC-CeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 233 4899999995 1 0 122457899999999999998777643
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-09 Score=102.51 Aligned_cols=153 Identities=17% Similarity=0.298 Sum_probs=90.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.||+++||+|.+. ..++++++...++|+|+++||++.. .++++.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999999752 2244555554679999999999852 4555665554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007233 367 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r 446 (612)
||||... + ..... ... +. .....
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~-----------------------------~~---~~~~~ 77 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY-----------------------------LL---DALRL 77 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS-----------------------------SH---SEEEE
T ss_pred CCccccc------c-------------hhhhh------ccc-----------------------------cc---cceee
Confidence 9999631 0 00000 000 00 00000
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCC
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 526 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~ 526 (612)
.-..+.|++.|.+. +... .. .+.+..++...+++++|+||.|..+... .
T Consensus 78 ~~~~~~i~~~H~~~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------~ 126 (156)
T PF12850_consen 78 TIDGFKILLSHGHP-YDVQ-----------WD-PAELREILSRENVDLVLHGHTHRPQVFK------------------I 126 (156)
T ss_dssp EETTEEEEEESSTS-SSST-----------TT-HHHHHHHHHHTTSSEEEESSSSSEEEEE------------------E
T ss_pred eecCCeEEEECCCC-cccc-----------cC-hhhhhhhhcccCCCEEEcCCcccceEEE------------------E
Confidence 11245788888766 3321 11 4567788889999999999999977653 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEE
Q 007233 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTA 566 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 566 (612)
+++.++..|+-+... . ...-+|+.+++
T Consensus 127 ~~~~~~~~Gs~~~~~--~-----------~~~~~~~i~~~ 153 (156)
T PF12850_consen 127 GGIHVINPGSIGGPR--H-----------GDQSGYAILDI 153 (156)
T ss_dssp TTEEEEEE-GSSS-S--S-----------SSSEEEEEEEE
T ss_pred CCEEEEECCcCCCCC--C-----------CCCCEEEEEEE
Confidence 467778888765431 1 11458888887
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.8e-09 Score=105.72 Aligned_cols=88 Identities=13% Similarity=0.256 Sum_probs=58.3
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccc--------cchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQ--------YASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
+..||++.++|||.+...+..-.+.++ ....+.++++++ .++||||+++||+++.......-.-+++.++|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997652211111111 112345666665 38999999999999774332222245566776
Q ss_pred h-hcCCCeEEcCCCCccC
Q 007233 356 I-ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l-~s~vP~~~v~GNHD~~ 372 (612)
. ..+|||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 4 4589999999999965
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.3e-09 Score=95.73 Aligned_cols=96 Identities=29% Similarity=0.427 Sum_probs=69.2
Q ss_pred cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCC
Q 007233 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN 403 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (612)
..++|+|+++||+++.... ..+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 3789999999999975543 333333323333455899999999999
Q ss_pred CCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHH
Q 007233 404 RAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESL 483 (612)
Q Consensus 404 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (612)
|++.|.|+ +....... .. ... .+..+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc--chh-hHHHH
Confidence 88999998 54432111 11 011 26788
Q ss_pred HHHHHhcCCeEEEecCcccceeec
Q 007233 484 QKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 484 ~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
..++.+.+++++|+||.|.+++..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-09 Score=109.76 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=57.0
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
...++++.++|+|.... +....+.+.++.+ ..+|+|+.+||++.. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34689999999998742 1122344455544 467999999999964 22344567777788888899999
Q ss_pred EcCCCCccCC
Q 007233 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-08 Score=94.03 Aligned_cols=59 Identities=15% Similarity=0.418 Sum_probs=42.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
|++++||+|... ..++++++...++|.|+++||+++.... .. +....|++.+.|
T Consensus 1 ~i~~isD~H~~~---------------~~~~~~~~~~~~~d~ii~~GD~~~~~~~-~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGSL---------------ELLEKALELFGDVDLIIHAGDVLYPGPL-NE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCCH---------------HHHHHHHHHhcCCCEEEECCcccccccc-ch----------hhcCCcEEEEeC
Confidence 589999999542 3455666655559999999999954322 11 234679999999
Q ss_pred CCccC
Q 007233 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99973
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-08 Score=91.40 Aligned_cols=117 Identities=21% Similarity=0.365 Sum_probs=75.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
||+++||+|.... .+ ...++|+|+++||++.. +...+++.+.+.++.+. ..+++.++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999996421 11 22679999999999953 44444555555555442 123578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007233 368 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 447 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~ 447 (612)
|||... . . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--~ 67 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--E 67 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C--C
Confidence 999620 0 1 1
Q ss_pred CCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 448 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 448 ~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.+.|++.|.|+ +..... .... ...+.+.+.+++++++++++|+||+|...
T Consensus 68 --~~~ilv~H~~p-~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 68 --DTDILVTHGPP-YGHLDL-VSSG---QRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CCEEEEECCCC-CcCccc-cccC---cccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 23688899998 665321 1100 11224578888899999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-07 Score=94.96 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
+||+++||.|.... . ... +.++. .+||+|+++||++... .++.+.+..+ ..|+++++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1333333333 47999999
Q ss_pred CCCccCC
Q 007233 367 GNHERDW 373 (612)
Q Consensus 367 GNHD~~~ 373 (612)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-08 Score=98.54 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=34.5
Q ss_pred CCccEEEEeCcccccCCc--hhHHHHHHHhhhhhh---cCCCeEEcCCCCccC
Q 007233 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~---s~vP~~~v~GNHD~~ 372 (612)
.+||+|+++||+++.... ..+|.+.++.+.++. ..+|++.++||||.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 579999999999966543 233544444444443 368999999999985
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.5e-07 Score=85.68 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=41.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
+++++||+|...... .....+.+++++ .++|.|+|+||++. . ...+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 489999999654211 112345555554 57999999999984 1 222333332 247999999
Q ss_pred CCccC
Q 007233 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.7e-07 Score=87.19 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|++++||+|.... ..+.+.++++...++|.|+|+||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 47999999996421 12334455554348999999999981 1233333332 45899999
Q ss_pred CCCcc
Q 007233 367 GNHER 371 (612)
Q Consensus 367 GNHD~ 371 (612)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.9e-08 Score=99.58 Aligned_cols=182 Identities=18% Similarity=0.241 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-hcCCccEEEEeCcccccC-Cc---hhHHHHHHHhhhhhhcC-C
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-DLKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~pDfvl~~GDi~Y~~-g~---~~~wd~f~~~i~~l~s~-v 360 (612)
.|+++++|+|.+... +...+.+.+.++ ...++|+|+++||+++.- |. ....+...+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 378999999986431 111122222222 225799999999999531 11 12223455556666544 8
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 007233 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHC 440 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 440 (612)
|++.+.||||..... .+. .++|+ .. +|. ...+++++.++++.-... +......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~---~~--l~~------~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM---TL--LPD------PSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC---EE--eCC------cEEEEECCEEEEEECCcc-cccCCHHHHHHHHH
Confidence 999999999974210 010 01111 01 111 134666777766664322 11233556666555
Q ss_pred HhhccCCCCCEEEEEEecccccCCCcc------------cc-CCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIF------------YA-VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~------------~~-~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
+.. ||...+.|.++ +....+ .. ....+... ..+.+.+++++++++++++||+|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 12333333333 211000 00 00011111 145788999999999999999998654
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.5e-06 Score=84.97 Aligned_cols=176 Identities=19% Similarity=0.293 Sum_probs=100.6
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHh--hhhhh-cCCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQ--IEPIA-STVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~--i~~l~-s~vP 361 (612)
.+|++++.|.|.... .+..+..++++ .++|+++.+||++|.. +... .-.+. ++.+. ..+|
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~---~~~~~~~~e~l~~~~~~ 66 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKE---VAEELNKLEALKELGIP 66 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchH---HHHhhhHHHHHHhcCCe
Confidence 479999999986531 12233333333 4799999999999432 1111 11111 34444 4799
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCC--CCC----CCC-HHHH
Q 007233 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDW----REG-TEQY 434 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~----~~~-~~Q~ 434 (612)
+++++||-|-..-. ... .. .++. + .+ -..+.|++.|+.+--. ..| ... .+-+
T Consensus 67 v~avpGNcD~~~v~--~~l---~~---~~~~------v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 67 VLAVPGNCDPPEVI--DVL---KN---AGVN------V-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred EEEEcCCCChHHHH--HHH---Hh---cccc------c-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 99999998853100 000 00 0000 0 00 3466777777774211 111 112 2334
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
.-|++-+.+.+ .+-.|+..|.|+ |..... ...+ ....|...+.+++++.++-+.++||.|-+.-
T Consensus 126 s~l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 126 SKLKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 45555555542 121399999999 766432 1111 1345678999999999999999999998543
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=88.44 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=38.9
Q ss_pred HHHHHHHhcCCccEEEEeCcccccCC--chhHHHHHHHhhhhhhc---CCCeEEcCCCCccC
Q 007233 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~i~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~s---~vP~~~v~GNHD~~ 372 (612)
.++++++. .+||+|+++||++.... ...+|..+...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996532 23456665555554433 58999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=92.70 Aligned_cols=177 Identities=18% Similarity=0.264 Sum_probs=89.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-------------------
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd------------------- 347 (612)
=|+++++|.+... ..++.+..++.+ .++|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 4789999986331 224445555555 48999999999997766666676
Q ss_pred -------HHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCC--CCCCceEEEEEeCCEEE
Q 007233 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA--ENRAKFWYSTDYGMFRF 418 (612)
Q Consensus 348 -------~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~--~~~~~~~Ysfd~G~v~f 418 (612)
.|++.+..+ .+|.+++|||||-.. . .|+. .++....-.|. +-... +.+--|.+-|
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~--~-~~lr---------~a~~~e~v~p~~~~vH~s--f~~~~g~y~v 136 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE--R-FFLR---------EAYNAEIVTPHIHNVHES--FFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH--H-HHHH---------HHHHCCCC-TTEEE-CTC--EEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH--H-HHHH---------HHhccceeccceeeeeee--ecccCCcEEE
Confidence 666666554 899999999999621 0 0000 00110000110 00011 2233345777
Q ss_pred EEEeCCCC---CCC------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh
Q 007233 419 CVADTEHD---WRE------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 419 i~Ldt~~~---~~~------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k 489 (612)
+++-.+.. ... -....+|..+.|..+ +..-+|++.|.|+-+.. +. ...|.+.+..++++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~k------g~---~h~GS~~V~dlIk~ 204 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHK------GL---IHVGSAAVRDLIKT 204 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCT------CT---BTTSBHHHHHHHHH
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCC------Cc---ccccHHHHHHHHHh
Confidence 76654311 000 022345566666665 23348888999971111 10 12235689999999
Q ss_pred cCCeEEEecCcccce
Q 007233 490 YKVDIAIYGHVHNYE 504 (612)
Q Consensus 490 ~~VdlvlsGH~H~Ye 504 (612)
|+.+++|+||.|.-.
T Consensus 205 ~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 205 YNPDIVLCGHIHESH 219 (255)
T ss_dssp H--SEEEE-SSS-EE
T ss_pred cCCcEEEecccccch
Confidence 999999999999744
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.2e-07 Score=84.93 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=33.1
Q ss_pred EEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 452 LIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 452 vIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
.|++.|+|+ +.... ..+ . ...+.+.+.+++.+++++++|+||.|.....
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 577888887 53321 111 1 1123678889999999999999999986554
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.3e-07 Score=98.36 Aligned_cols=175 Identities=19% Similarity=0.213 Sum_probs=100.7
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCc----h---hHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCC
Q 007233 315 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGG 387 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~---~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgg 387 (612)
++++.|.+...++|+|+++||++--+.- . .......+.+......+|+++++||||.-..+.-.. ... ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~--~~~-~~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP--GSV-PK 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC--CCC-cc
Confidence 3555555555569999999999944311 1 111233444556667999999999999864322110 000 00
Q ss_pred cccc--cc------ceeeecCCCC----CCceEEE-EEeCCEEEEEEeCCCCC----------CCCHHHHHHHHHHHhhc
Q 007233 388 ECGV--LA------ETMFYVPAEN----RAKFWYS-TDYGMFRFCVADTEHDW----------REGTEQYKFIEHCLASV 444 (612)
Q Consensus 388 e~g~--~~------~~~f~~P~~~----~~~~~Ys-fd~G~v~fi~Ldt~~~~----------~~~~~Q~~WL~~~La~~ 444 (612)
..+. .| +..| +|.+. ..+.+|. .-+++.++|+||+..-+ ....+|++|+..+|.++
T Consensus 276 ~~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~a 354 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEA 354 (577)
T ss_pred hhhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHH
Confidence 0000 00 1111 34321 2344554 44588999999997421 12468899999999987
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccce
Q 007233 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYE 504 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~Ye 504 (612)
.. +..-|=+++|.|++ . +...+.- ...+-.++.++. +...|.||.|.=+
T Consensus 355 e~-~GekVhil~HIPpG-~--------~~c~~~w-s~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 355 ES-AGEKVHILGHIPPG-D--------GVCLEGW-SINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred Hh-cCCEEEEEEeeCCC-C--------cchhhhh-hHHHHHHHHHHHHhhhhhccccCccee
Confidence 53 33337788999982 1 1111111 335555565553 4567999999855
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.5e-07 Score=82.73 Aligned_cols=147 Identities=19% Similarity=0.258 Sum_probs=78.5
Q ss_pred CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q 007233 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 404 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
..=|.|+..|||+.+...... ..=++.+..+ ... -+.+.|||||-|+..... + -.+|..
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~L-PG~-K~m~rGNHDYWw~s~skl-~---------------n~lp~~-- 100 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEA-EEDLRFIGDL-PGT-KYMIRGNHDYWWSSISKL-N---------------NALPPI-- 100 (230)
T ss_pred ChhhEEEecccchhheechhh-hhhhhhhhcC-CCc-EEEEecCCccccchHHHH-H---------------hhcCch--
Confidence 345899999999987543221 1112222221 112 457999999977522100 0 001100
Q ss_pred CceEE---EEEeCCEEEEEE---eCC-CCCCCCHHHH--------HHHHHHHhhccCCCCCEEEEEEecccccCCCcccc
Q 007233 405 AKFWY---STDYGMFRFCVA---DTE-HDWREGTEQY--------KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 469 (612)
Q Consensus 405 ~~~~Y---sfd~G~v~fi~L---dt~-~~~~~~~~Q~--------~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~ 469 (612)
.+| .|.++++-+++. ++. .++.+-++|- .-|+..+.++-++...-.||+.|.|+ ++...
T Consensus 101 --l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP-~s~~~--- 174 (230)
T COG1768 101 --LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPP-FSDDG--- 174 (230)
T ss_pred --HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCC-CCCCC---
Confidence 011 255666555443 221 1222223332 22333222222334445899999998 66531
Q ss_pred CCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007233 470 VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 470 ~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
. ...+.+++++++|+.++.||.|.-.|-.
T Consensus 175 ---t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 175 ---T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred ---C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 1 2256678889999999999999987753
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-07 Score=89.30 Aligned_cols=57 Identities=19% Similarity=0.460 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhc-------CCCeEEcCCCCccC
Q 007233 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS-------TVPYMIASGNHERD 372 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s-------~vP~~~v~GNHD~~ 372 (612)
+++.++++. .+||+|+++||+++.... ..+|.+..+.+..+.. .+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555554 689999999999965432 2456655555544432 68999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-06 Score=88.48 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=45.8
Q ss_pred EEEeecCCCCCCCCCcccccccchH-HHHHHHHHhcCCccEEEEeCccccc----CCchhHHHHHHHhhhhhhc-CCCeE
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~pDfvl~~GDi~Y~----~g~~~~wd~f~~~i~~l~s-~vP~~ 363 (612)
++++|+|.+... +... ..++.+.+...+||+|+++||+++. +......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987421 1111 2233333322479999999999952 1112222344555666554 58999
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.49 E-value=2e-07 Score=93.28 Aligned_cols=138 Identities=20% Similarity=0.284 Sum_probs=80.7
Q ss_pred CCccEEEEeCcccccCCc---------------------hhHHHH-HH-----HhhhhhhcCCCeEEcCCCCccCCCCCC
Q 007233 325 KNIDIVFHIGDICYANGY---------------------ISQWDQ-FT-----AQIEPIASTVPYMIASGNHERDWPGTG 377 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~---------------------~~~wd~-f~-----~~i~~l~s~vP~~~v~GNHD~~~~~~~ 377 (612)
.+||++||+||.+|++.. ...+.. +. ..++.+.+++|++.++.+||+..+...
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999999852 111211 11 124556778999999999999643221
Q ss_pred CCCCCCCC-CC-----ccc-cccceeeecCCC-----CCCceEEEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007233 378 SFYGNKDS-GG-----ECG-VLAETMFYVPAE-----NRAKFWYSTDYGMF-RFCVADTEHDWREGTEQYKFIEHCLASV 444 (612)
Q Consensus 378 ~~y~~~ds-gg-----e~g-~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~~~~~~Q~~WL~~~La~~ 444 (612)
. ...... .. +.+ ..|....+.+.. .....|+++.+|.. .|++||++...
T Consensus 108 ~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R----------------- 169 (228)
T cd07389 108 D-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR----------------- 169 (228)
T ss_pred c-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc-----------------
Confidence 1 000000 00 000 011111122211 23568999999996 99999998653
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCC--eEEEecCcccceee
Q 007233 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV--DIAIYGHVHNYERT 506 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~V--dlvlsGH~H~YeR~ 506 (612)
+.|.+ + +..|++|..++.+.++ -++|+|++|.-+-.
T Consensus 170 --------------------d~W~~----~--~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------DSWDG----Y--PAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------ccccc----c--HHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 12211 1 1127788877665543 38899999986543
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.48 E-value=4e-06 Score=90.74 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=51.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhh-------
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 355 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~------- 355 (612)
.+||++++|+|.+...... ........+++++++. ..++|+||++||+...... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~---~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDP---VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccCCc---hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 4899999999987431110 0111234455555543 2679999999999965432 1222233333332
Q ss_pred -----h----------------------hcCCCeEEcCCCCccC
Q 007233 356 -----I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -----l----------------------~s~vP~~~v~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1369999999999974
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-05 Score=78.00 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=43.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch-----hHHHHHHHhhhhhhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~-----~~wd~f~~~i~~l~s~vP 361 (612)
.|++++||+|.+. ..++.+.+.+++ .++|.|+|+||++...... ...++..+.++.+ ..|
T Consensus 1 mri~viSD~Hg~~------------~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL------------PATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH------------HHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 3899999999431 112333333332 6799999999999532210 0123334444332 358
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999963
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.5e-06 Score=85.65 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
++|+.++|+|..-.+ . -+.+....+..++++. .++| +++..||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 489999999943210 0 0111233344444432 3577 88999999954432 11211111222222222445
Q ss_pred EcCCCCccCC
Q 007233 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
.++||||+++
T Consensus 74 ~~~GNHe~d~ 83 (252)
T cd00845 74 VTIGNHEFDY 83 (252)
T ss_pred Eeeccccccc
Confidence 6789999874
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=84.21 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.3
Q ss_pred cCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhh--------------------cCCCeEEcCCCCccCC
Q 007233 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~--------------------s~vP~~~v~GNHD~~~ 373 (612)
..+||.|+++||+... +. .++|.+....+..+. ..+|++.++||||+..
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 33 344443222222211 1489999999999964
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.5e-05 Score=82.33 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=90.1
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccchHHHHHHHHHhc--CCccEEEE-eCcccccCCchhHHH---------HHHHhh
Q 007233 287 QRVVIFGDMGKDEADG-SNEYNDFQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~-~GDi~Y~~g~~~~wd---------~f~~~i 353 (612)
++|+.++|+|..-... ...-..-..+....+..++++. .+++.+++ +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999999542110 0000000012233444444432 35777766 999995432 12221 122333
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeC-CEEEEEE--eCCCC-
Q 007233 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYG-MFRFCVA--DTEHD- 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G-~v~fi~L--dt~~~- 426 (612)
..+ ... +.++||||+++... .+.... .+.+.++ .+..... .......|.-++.+ ++++-++ -+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKVI--KQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHHH--HhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 333 55789999875211 000000 0000111 0111000 00112345667888 8655444 33211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007233 427 -W-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 427 -~-----------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vd 493 (612)
+ ....+..++..+.|++ .+...+|+++|-....... ..... +.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~-----~~~~~----~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLE-----ESLTG----ENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcc-----cccCC----ccHHHHHHhcCCCCc
Confidence 1 0111233444444543 3567899999987621110 00000 2233344444 5899
Q ss_pred EEEecCcccce
Q 007233 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|.||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.8e-05 Score=81.07 Aligned_cols=191 Identities=17% Similarity=0.224 Sum_probs=100.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCch-----------hHHHHHHHhhhhh
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 356 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~~-----------~~wd~f~~~i~~l 356 (612)
|+|.||.|..- . .....+..+.+. ..++|++|++||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899998531 0 111223333222 24699999999996322111 1233444444432
Q ss_pred h-cCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC---CCCC---
Q 007233 357 A-STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH---DWRE--- 429 (612)
Q Consensus 357 ~-s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~---~~~~--- 429 (612)
. ..+|.+++.||||-. .++.....|++.. .+.+.+-. ...+++++++|..|.-.. ++..
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v~---~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWVA---PNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCeec---CcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 367779999999952 1111111122210 11121211 124567899999887521 1111
Q ss_pred -----CHHHHHHHH-------HHHhhccCCCCCEEEEEEecccccCCCccccCC-------CCC-----CchhhHHHHHH
Q 007233 430 -----GTEQYKFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-------GSF-----AEPMGRESLQK 485 (612)
Q Consensus 430 -----~~~Q~~WL~-------~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 485 (612)
...+.+.+. ..|... +.+--|+++|.|+ +.-..+ +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 122232211 122221 1223699999998 554321 110 000 01335678889
Q ss_pred HHHhcCCeEEEecCccc-ceeeccc
Q 007233 486 LWQKYKVDIAIYGHVHN-YERTCPI 509 (612)
Q Consensus 486 l~~k~~VdlvlsGH~H~-YeR~~p~ 509 (612)
|+++.+...+|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777553
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.9e-06 Score=83.15 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=44.5
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccC-----CchhHHHHH-HHhhhhhhcCCC
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~-----g~~~~wd~f-~~~i~~l~s~vP 361 (612)
++++|+|.+.... ........+.+.. .++|.++++||++..- ......+.. ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1112233333322 4899999999999531 111112222 333444456899
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-05 Score=81.61 Aligned_cols=186 Identities=18% Similarity=0.164 Sum_probs=87.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhHH---HHHHHhhhhhhcCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~s~v 360 (612)
++++.+.|+|.-... .... .+.+..+..++++. .+++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~~--~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGGP--VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCCC--cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 478889999832211 0011 12233444444432 3567 9999999995432 2111 1222222222 22
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecCCCC---CCceEEEEEeCCEEE--EEEeCCCCC------
Q 007233 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFRF--CVADTEHDW------ 427 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~f--i~Ldt~~~~------ 427 (612)
-+.++||||+++... .+...- .+.+.++ .+...-..+. .-+.|.-++.+++++ +.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~~--~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKRL--GESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHHH--hhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999964211 110000 0001111 0111000000 124567788888654 555443211
Q ss_pred CC---CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 428 RE---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 428 ~~---~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.. -.+-.+.+++.+++..+.+..-+|++.|-+. . . . + .+.+.+ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-~------------d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-N------------D--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-h------------h--H-HHHHhC--CCCceEEecccceeE
Confidence 00 0122233444333322246677899999775 1 0 0 1 222222 489999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.4e-05 Score=75.76 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=99.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccch---HHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYAS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
|++++||.=-. ++. ...+.++.++ .++||++..||++-.. |.. ....+.+..+ .+-++
T Consensus 1 ~ilfigdi~g~------------~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D~i 62 (255)
T cd07382 1 KILFIGDIVGK------------PGRKAVKEHLPKLKKE-YKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVDVI 62 (255)
T ss_pred CEEEEEeCCCH------------HHHHHHHHHHHHHHHH-CCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCCEE
Confidence 58899998321 111 1234444333 5699999999998433 222 1222222221 34444
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L 441 (612)
+.|||+++...-..+++..+ .+. ..-++|.......|+-++.+++++-+++- ......-..-++-+++.+
T Consensus 63 -TlGNH~fD~gel~~~l~~~~------~~l-~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v 134 (255)
T cd07382 63 -TMGNHTWDKKEILDFIDEEP------RLL-RPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELL 134 (255)
T ss_pred -EecccccCcchHHHHHhcCc------Cce-EeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHH
Confidence 55999998642111211100 000 11123322234457778888876555443 211111112234466666
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcc
Q 007233 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 521 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~ 521 (612)
++.+ .+...+||.+|--. ++ + ...+.. ....+||+++.||+|..---. +.
T Consensus 135 ~~lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~-----~i------- 184 (255)
T cd07382 135 EELK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADE-----RI------- 184 (255)
T ss_pred HHHh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCcc-----EE-------
Confidence 6553 25677999999532 11 1 122332 224469999999999843211 11
Q ss_pred ccCCCCceEEEE-eCCCCCC
Q 007233 522 YKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||.|+. +|+-|..
T Consensus 185 ---l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 ---LPGGTAYITDVGMTGPY 201 (255)
T ss_pred ---eeCCeEEEecCccccCC
Confidence 136777776 6666653
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00023 Score=72.85 Aligned_cols=198 Identities=14% Similarity=0.047 Sum_probs=105.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.|++++||.=... .... ...+.++.++ .++||++..||++- .|...- ..-.+.+.. ..+-++..
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~-gG~Gi~-~~~~~~L~~--~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENTT-HGKGLT-LKIYEFLKQ--SGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCcccC-CCCCCC-HHHHHHHHh--cCCCEEEc
Confidence 3799999984210 1111 1233344333 47999999999994 332111 122222221 25566555
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC-CC-CC--CHHHHHHHHHHH
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH-DW-RE--GTEQYKFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~-~~-~~--~~~Q~~WL~~~L 441 (612)
|||+++....-.+. +.. +. .....++|....+..|..++.++.++-+++-.. .+ .+ ...-++-+++.+
T Consensus 66 -GNH~~Dkge~~~~i---~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKLILDVV---INQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcHHHHHH---hcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 99999854311111 110 10 011123343333445666788887766665321 11 11 111223344555
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcc
Q 007233 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 521 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~ 521 (612)
++.+ .+.+.+||..|.-- .. .+.....+.+.+|++|+.-|.|..--- .++
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD-----~~i------- 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTAD-----LRI------- 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCc-----cee-------
Confidence 5443 24678999999432 01 235566777889999999999984211 111
Q ss_pred ccCCCCceEEEE-eCCCCCC
Q 007233 522 YKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ +|+.|..
T Consensus 188 ---l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ---LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ---CCCCCEEEecCCcccCc
Confidence 146888887 7888864
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00037 Score=72.59 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe-
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY- 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~- 362 (612)
++|+.++|+|..-.... ....-+.+.+..+..++++. .++ .+++..||++......+.+..-...+ .++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~-~~~n~~g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTI-EALNAMGVD 78 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHH-HHHHhhCCe
Confidence 47899999995422100 00000112234455555432 234 48999999995443322211101111 22223333
Q ss_pred EEcCCCCccCC
Q 007233 363 MIASGNHERDW 373 (612)
Q Consensus 363 ~~v~GNHD~~~ 373 (612)
+.++||||+++
T Consensus 79 a~t~GNHefd~ 89 (288)
T cd07412 79 ASAVGNHEFDE 89 (288)
T ss_pred eeeeccccccc
Confidence 46789999975
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.9e-05 Score=76.54 Aligned_cols=190 Identities=11% Similarity=0.069 Sum_probs=88.7
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccchHHHHHHHHHhc--C-CccEE-EEeCcccccCCchhHHHHHHHhh
Q 007233 287 QRVVIFGDMGKDEADGS---------NEYNDFQYASLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~--~-~pDfv-l~~GDi~Y~~g~~~~wd~f~~~i 353 (612)
++|+.++|+|..-.... ..+.. .+-+..+..++++. . ++|.+ +.+||+...... ..+.+.. .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46788888886432110 00111 12234455555542 3 68876 679999955432 2222111 22
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeCCEE--EEEEeCCCC--
Q 007233 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHD-- 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~-- 426 (612)
-..+..+++.++.||||++.... .+.... .+.+.++ .+...-. ....-+.|.-++.++++ ||.+.+...
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~--~l~~~~--~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPE--RVRELF--GRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHH--HHHHHH--hhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 22333467666669999874211 000000 0000111 0000000 00011235567888854 555554321
Q ss_pred CCC--------CHHHHHHHHHHHhhcc-CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007233 427 WRE--------GTEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 427 ~~~--------~~~Q~~WL~~~La~~~-r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
... -....+.+++.+.+.. ..+...+|++.|-+. . +. + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~-------------~~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-P-------------VD--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-h-------------hh--H-H---HHhcCCCCcEEE
Confidence 000 0223444544433321 145677999999764 1 00 1 2 2222 5799999
Q ss_pred ecCcccce
Q 007233 497 YGHVHNYE 504 (612)
Q Consensus 497 sGH~H~Ye 504 (612)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999743
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00064 Score=65.14 Aligned_cols=64 Identities=14% Similarity=0.307 Sum_probs=40.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.++++++|+|...+. .....++. ...++|+|||+||.+..... . .+-.. -..+++.+.
T Consensus 2 m~ilviSDtH~~~~~------------~~~~~~~~-~~~~~d~vih~GD~~~~~~~-~---~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEKALKIF-NLEKVDAVIHAGDSTSPFTL-D---ALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhHHHHHh-hhcCCCEEEECCCcCCccch-H---Hhhcc-----cccceEEEE
Confidence 589999999976420 11122222 23689999999999954322 1 11111 146899999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.9e-05 Score=79.35 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhc-C-CC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s-~-vP 361 (612)
+||++++|+|.+....... . .......++++++. ..++|+|+++||++...... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~-~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--R-LAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--h-HHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4899999999875321100 0 01112234444332 25799999999999654322 222334444555433 3 89
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=3e-05 Score=76.81 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=42.4
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----------CCccEEEEeCcccccCCchhHHHHHHHhhhhh---
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 356 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--- 356 (612)
+++||+|.. ...++++++.. .+.|.++++||++....... +.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~---~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI---EILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH---HHHHHHHHHHHH
Confidence 478999854 34567777653 25899999999995433222 233332222
Q ss_pred --hcCCCeEEcCCCCccC
Q 007233 357 --ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 --~s~vP~~~v~GNHD~~ 372 (612)
....+++++.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.3e-05 Score=83.86 Aligned_cols=83 Identities=14% Similarity=0.235 Sum_probs=51.2
Q ss_pred eEEEEEeecCCCC-CCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhh-cCCC
Q 007233 287 QRVVIFGDMGKDE-ADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~-~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~-s~vP 361 (612)
+||++++|+|.+. ... ...+. ......+.++++. ..++||||++||+....... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~--~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLN--LPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhcc--Cccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 4899999999983 211 10111 1122334443332 16799999999999654321 11234556666554 3799
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999975
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00029 Score=73.23 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=28.3
Q ss_pred CCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 448 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 448 ~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+..-+|++.|-.. +... ..... ... ...+...+...+||++|.||.|...
T Consensus 173 ~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 5677999999775 2211 00000 010 1233333323589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00048 Score=71.43 Aligned_cols=198 Identities=14% Similarity=0.103 Sum_probs=89.7
Q ss_pred CeEEEEEeecCCCCCCCC--Ccc-cccccchHHHHHHHHHh--cCCcc-EEEEeCcccccCCchhHHH-HHHHhhhhhhc
Q 007233 286 LQRVVIFGDMGKDEADGS--NEY-NDFQYASLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~--~~~-~~~~~~~~~~~~~i~~~--~~~pD-fvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~s 358 (612)
.++|+...|+|..-.... ... ..+ .+....++++.+. ..+++ +++..||........ .+. .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~-gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~-~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADW-GDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLS-DASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCH-HHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeece-eeecCCChHHHHHHH
Confidence 489999999996421100 000 001 0111222333221 13455 778899999544221 111 00122333444
Q ss_pred CCCe-EEcCCCCccCCCCCC-CCCCCCCCCCcccccc--ceeeecCC--C--CCCceEEEEEeC-CEE--EEEEeCCCC-
Q 007233 359 TVPY-MIASGNHERDWPGTG-SFYGNKDSGGECGVLA--ETMFYVPA--E--NRAKFWYSTDYG-MFR--FCVADTEHD- 426 (612)
Q Consensus 359 ~vP~-~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~--~~~f~~P~--~--~~~~~~Ysfd~G-~v~--fi~Ldt~~~- 426 (612)
.++| ..++||||++....+ ..+... -.+...|+ .+.+.-.. . .....|.-++.+ +++ ||++-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5555 468999999742211 000000 00000111 11110000 0 011235566766 655 555544321
Q ss_pred ------CCCC--HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 007233 427 ------WREG--TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVD-IAI 496 (612)
Q Consensus 427 ------~~~~--~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~Vd-lvl 496 (612)
+.+. ..+.+|+.+.|++ .+..-+|++.|-.+ .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35667999999774 21 111 0 11122333343 577 799
Q ss_pred ecCcccc
Q 007233 497 YGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
.||.|..
T Consensus 225 ~GHsH~~ 231 (282)
T cd07407 225 GGHSHVR 231 (282)
T ss_pred eCCcccc
Confidence 9999974
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.2e-05 Score=79.06 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=73.0
Q ss_pred CCCeEEEEEeecCCCCCCCCCccc----ccccchHHHHHHH---HHhcCCccEEEEeCcccccCC--chhHHHHHHHhhh
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQL---IQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIE 354 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~~~~~~~~i---~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~ 354 (612)
+..+|+++++|.|.-....+..+. .|..+ --+.+. .....+||.++++||+.+.+- ..++|.+..+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHH
Confidence 456999999999987633221111 11110 011111 112368999999999995332 2567766555565
Q ss_pred hhhc---CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC
Q 007233 355 PIAS---TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH 425 (612)
Q Consensus 355 ~l~s---~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~ 425 (612)
.+.. ++|.+.++||||.+.... .-.....||.- ..++...+|+.|++.|+++|++.
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehh
Confidence 5543 799999999999964211 00001122210 01223356899999999999875
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00033 Score=71.71 Aligned_cols=80 Identities=18% Similarity=0.234 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CccEEEEeCcccccCCchhHHHHHHHhhhhhhc-CCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s-~vP~~ 363 (612)
++++.++|+|..-..... +.+.+..+..++++.. +.++++.+||++.... ...+..-...++.+.. .+-+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 478999999964321100 1122333444444322 5789999999985432 1111111111222212 3444
Q ss_pred EcCCCCccCC
Q 007233 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
.++||||+++
T Consensus 74 ~~~GNHefd~ 83 (257)
T cd07408 74 VTPGNHEFDY 83 (257)
T ss_pred EccccccccC
Confidence 4689999974
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.3e-05 Score=81.05 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=47.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhH-HHHHHHhhhhhhc-CCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~-wd~f~~~i~~l~s-~vP~ 362 (612)
+||++++|+|.+..-.. .... ......++++++. ..+||+|+++||+......... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~--~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYS--KSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccC--cccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 48999999998743100 0000 0011223333332 2689999999999954322211 1223333333332 6899
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=8.3e-05 Score=79.26 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=49.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHh--hhhhh-cCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~--i~~l~-s~v 360 (612)
+||++++|+|.+..... . .........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~--~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-P--WFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-h--hhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999753211 1 0011112344554432 268999999999996532 22111123332 33332 379
Q ss_pred CeEEcCCCCccC
Q 007233 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0008 Score=69.83 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=45.0
Q ss_pred eEEEEEeCCEE--EEEEeCCCC--CC---CC---HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCc
Q 007233 407 FWYSTDYGMFR--FCVADTEHD--WR---EG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 476 (612)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~--~~---~~---~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
.|.-++.++++ ||.+-+... +. .+ .+..+.+++.+++.+..+..-+|++.|-.. . .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 35567888855 455544321 00 01 233455666666654345677899999664 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 477 PMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
. + .|...+ .+||++|.||.|...
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 589999999999964
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00018 Score=67.48 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCc
Q 007233 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD 370 (612)
+.++.+.++..+.|++|.+||+.-.+....+|..++.- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44555544456799999999999554433333333332 1234788888989986
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0001 Score=73.06 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=46.3
Q ss_pred EEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCccccc-CCchhHHHHHHHh----hhhhhc-CCCeE
Q 007233 291 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYA-NGYISQWDQFTAQ----IEPIAS-TVPYM 363 (612)
Q Consensus 291 v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~-~g~~~~wd~f~~~----i~~l~s-~vP~~ 363 (612)
+++|.|.++.. |.....+...+++ ..+.|.++++||++.. -|. ..|.++.++ +..++. .+|++
T Consensus 2 FISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 68999988431 2233455555554 2356999999999953 122 245554444 333444 59999
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||+-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999964
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00075 Score=83.13 Aligned_cols=196 Identities=16% Similarity=0.158 Sum_probs=90.1
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEE-eCcccccCCchhHHHHHHHhhhhhhcCCC
Q 007233 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFH-IGDICYANGYISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~-~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP 361 (612)
+...++|++++|+|..- .+ + ......++++.+ .+++.++. +||++.... ...+.+-...++. +..+.
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~g------~-~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~-~~~~~~g~~~~~~-ln~lg 724 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-DG------A-AKRVTKIKEVKE--ENPNTILVDAGDVYQGSL-YSNLLKGLPVLKM-MKEMG 724 (1163)
T ss_pred CceEEEEEEEeecccCC-CC------H-HHHHHHHHHHHh--hCCCeEEEecCCCCCCcc-hhhhcCChHHHHH-HhCcC
Confidence 33459999999999431 11 0 111223333333 46777655 999985432 1211111112222 22233
Q ss_pred e-EEcCCCCccCCCCCC--CCCCCCCCC-C-------cccccc--ceeeecCCCC---CCceEEEEEeCCEE--EEEEeC
Q 007233 362 Y-MIASGNHERDWPGTG--SFYGNKDSG-G-------ECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFR--FCVADT 423 (612)
Q Consensus 362 ~-~~v~GNHD~~~~~~~--~~y~~~dsg-g-------e~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~--fi~Ldt 423 (612)
+ +.++||||+++.... .+.. ..+ . ....|+ .+.+...... ....|.-++.++++ ||++-+
T Consensus 725 ~d~~~~GNHEfd~g~~~l~~~l~--~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 725 YDASTFGNHEFDWGPDVLPDWLK--GGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred CCEEEecccccccChHHHHHHHH--hcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 3 559999999753210 0000 000 0 000111 1111111111 11345667888855 566544
Q ss_pred CCC--C-CC----C---HHHHHHHHHHHhhcc-CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cC
Q 007233 424 EHD--W-RE----G---TEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YK 491 (612)
Q Consensus 424 ~~~--~-~~----~---~~Q~~WL~~~La~~~-r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~ 491 (612)
... + .+ + .+..+.+++..++.+ ..+...+|++.|... ... . ..+ ......|.++ -+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 0 00 0 122333444443332 145777999999875 111 0 001 1123344444 37
Q ss_pred CeEEEecCcccce
Q 007233 492 VDIAIYGHVHNYE 504 (612)
Q Consensus 492 VdlvlsGH~H~Ye 504 (612)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999853
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0011 Score=75.35 Aligned_cols=200 Identities=16% Similarity=0.165 Sum_probs=87.9
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc------CC-ccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
...++|+.+.|+|..-... .+... + +..+..++++. .+ .-+++..||+.... ....+..- +.+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~~~--G-~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYGEY--G-LAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccCCc--c-HHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 01111 1 22233333321 12 35888999998532 12211110 011112
Q ss_pred hcCCCe-EEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeCCEE--EEEEeCCCC--C-
Q 007233 357 ASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHD--W- 427 (612)
Q Consensus 357 ~s~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 427 (612)
+..+.+ ..++||||+++... .+..... +...|+ .+...-. ....-..|.-++.++++ ||++-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~~--~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQEK--WAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhhc--cCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 34679999986321 1110000 000111 0111000 00112345667888865 455543321 1
Q ss_pred CCC-------HHHHHHHHHHHhhccC-CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc---CCeEEE
Q 007233 428 REG-------TEQYKFIEHCLASVDR-QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY---KVDIAI 496 (612)
Q Consensus 428 ~~~-------~~Q~~WL~~~La~~~r-~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~---~Vdlvl 496 (612)
.+. .+..+-+++.+++.+. .+..-+|++.|..+ ..... .+ +.. ..-..|.++. +||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~--~~d~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA--PGDVEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC--ccHHHHHHhCCccCceEEE
Confidence 000 1112223333333321 35777999999876 21110 00 000 0112334443 799999
Q ss_pred ecCcccce
Q 007233 497 YGHVHNYE 504 (612)
Q Consensus 497 sGH~H~Ye 504 (612)
.||.|.+-
T Consensus 251 gGHsH~~~ 258 (551)
T PRK09558 251 GGHSQDPV 258 (551)
T ss_pred eCCCCccc
Confidence 99999853
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0011 Score=74.76 Aligned_cols=203 Identities=14% Similarity=0.131 Sum_probs=95.5
Q ss_pred CCCCCeEEEEEeecCCCCCCCCCccccccc--chHH----HHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007233 282 GQNSLQRVVIFGDMGKDEADGSNEYNDFQY--ASLN----TTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~----~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
.....++|+...|+|..-... .+..... +.+. .++++.++ .+..++|..||+......... ..-.+.+-.
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~-~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAE-NKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred cCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhh-cCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 344569999999999764310 1110001 1122 22333322 345689999999965433221 000111112
Q ss_pred hhcCCCe-EEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecCC--CCCCceEEEEEeCCEE--EEEEeCCC--C
Q 007233 356 IASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEH--D 426 (612)
Q Consensus 356 l~s~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~--~ 426 (612)
++..++| ..++||||++.... ++...- .+...|+ .+.+.-+. ....+.|.-++.++++ +|++.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~~~--~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALARLL--DEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHHHH--hccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2333443 45899999985321 000000 0000111 11111111 1123567788888854 56665421 1
Q ss_pred CCC--------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEec
Q 007233 427 WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 498 (612)
Q Consensus 427 ~~~--------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsG 498 (612)
+.. -.+..+++++.+.+.++....-+|++.|-++ ...... .... ... ..... ..+|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~--~~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEV--PGD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-cccc--ccc--ccccc-----cCcceEecc
Confidence 111 1244566666666654333567999999886 222111 1000 000 11111 349999999
Q ss_pred Ccccc
Q 007233 499 HVHNY 503 (612)
Q Consensus 499 H~H~Y 503 (612)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00094 Score=64.02 Aligned_cols=56 Identities=21% Similarity=0.273 Sum_probs=34.8
Q ss_pred HHHHHHHhcCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007233 316 TTRQLIQDLKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~i~~~~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
.+.+++++ .+||.|+++||+++..... .+..............+|++.+.||||..
T Consensus 32 ~l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 32 RLDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHh-cCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 33344433 6899999999999654321 11111111233334578999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0081 Score=68.26 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=41.1
Q ss_pred eEEEEEeCC--EEEEEEeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCC
Q 007233 407 FWYSTDYGM--FRFCVADTEHD-W---REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 475 (612)
Q Consensus 407 ~~Ysfd~G~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~ 475 (612)
.|.-++.++ +-||+|.+... . .++ .+..+=+++..++.++.+..-+|++.|... ..
T Consensus 130 p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~~----------- 196 (550)
T TIGR01530 130 PSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--EK----------- 196 (550)
T ss_pred ceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--HH-----------
Confidence 456678887 55677755211 1 111 011122222222222235677899999653 10
Q ss_pred chhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 476 EPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 476 ~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
. ..+.++ .+||++|.||.|.+-
T Consensus 197 -d------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 197 -N------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -H------HHHHhcCCCCCEEEeCCCCccc
Confidence 0 112333 379999999999954
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0014 Score=66.46 Aligned_cols=76 Identities=16% Similarity=0.301 Sum_probs=47.1
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCccEEEEeCcccccCC----c---------hhHHHHHHHh
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~pDfvl~~GDi~Y~~g----~---------~~~wd~f~~~ 352 (612)
++++|+|.+... ........+.+.++.. .++|.|+++||++.... . ...++.+.+.
T Consensus 2 ~~iSDlHl~~~~-------~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT-------FLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh-------hhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 688999976421 0111122333333322 25799999999996421 0 1224455566
Q ss_pred hhhhhcCCCeEEcCCCCccC
Q 007233 353 IEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 353 i~~l~s~vP~~~v~GNHD~~ 372 (612)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0016 Score=67.28 Aligned_cols=65 Identities=17% Similarity=0.287 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+++++||.|.+ ...+++++++. .+.|.++++||++.. |..+ .+.++.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 58999999854 34566666654 368999999999954 4332 2333443333 346889
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0016 Score=65.68 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=44.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----C--------CccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~--------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
|++++||.|.. ...+++++++. . +.|.++++||++.. |..+ .+-++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 68999999864 34566666653 1 36899999999954 4322 233444443
Q ss_pred hhcCCCeEEcCCCCccC
Q 007233 356 IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l~s~vP~~~v~GNHD~~ 372 (612)
+...-.+..+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 33334678999999963
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0012 Score=63.04 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=43.0
Q ss_pred EEEeecCCCCCCCC----CcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 290 VIFGDMGKDEADGS----NEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 290 ~v~GD~g~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+++|+|.+..... ..+...+......++.+.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 46788888754210 01111111111234444444567999999999996433 2222 2333332 4689999
Q ss_pred CCCCccC
Q 007233 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0014 Score=65.73 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
-+.++++|.|.+............| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3689999999874210000000011 112345555442 257999999999997654434555555555543 3599
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0018 Score=65.36 Aligned_cols=67 Identities=15% Similarity=0.266 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCccEEEEeCcccccCCchhHHHHHHHhhhh-hhcCCCe
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEP-IASTVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~-l~s~vP~ 362 (612)
|++++||.|... ..++++++.. ...|.++++||+++ .|..+. +..+.+.. +....++
T Consensus 2 ~~~~IsDIHG~~---------------~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s~--~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGEY---------------QKLLTIMDKINNERKPEETIVFLGDYVD-RGKRSK--DVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCCH---------------HHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCChH--HHHHHHHHHhhcCCCe
Confidence 689999999431 2234444332 23599999999995 443321 22222222 2234578
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.++||||..
T Consensus 64 ~~l~GNHE~~ 73 (235)
T PHA02239 64 VTLLGNHDDE 73 (235)
T ss_pred EEEECCcHHH
Confidence 9999999963
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=70.45 Aligned_cols=82 Identities=13% Similarity=0.290 Sum_probs=51.1
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h-------cCCccEEEEeCcccccCCc-------------
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 342 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~-------~~~pDfvl~~GDi~Y~~g~------------- 342 (612)
....++++++|+|.+... + ....+..+.+.+. . ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 1 1111222222222 1 2579999999999964221
Q ss_pred hhHHHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007233 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
..+++.+.+.++.+.+.+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112334555566666789999999999974
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0028 Score=62.58 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||.|.. ...++++++.. .++|.++++||+++..... .+.++.+. ..+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 68999999843 23456666543 3589999999999544322 23333332 246889
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.003 Score=64.21 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-----------CCccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
|++++||.|.. ...++++++.. ++-|.++++||+++ .|..+ .+-++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 68999999854 34566666652 12478999999995 45433 1233333333
Q ss_pred hcCCCeEEcCCCCcc
Q 007233 357 ASTVPYMIASGNHER 371 (612)
Q Consensus 357 ~s~vP~~~v~GNHD~ 371 (612)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0044 Score=62.04 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=42.5
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CccEEEEeCcccccCCchhHHHHHHHhhhhhhc
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s 358 (612)
+.++||.|-. ...+++++++.. ..|.++++||++.. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 3689999854 345666666531 35899999999944 4332 233444433333
Q ss_pred CCCeEEcCCCCccC
Q 007233 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~v~GNHD~~ 372 (612)
.-.++.+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 34688899999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.023 Score=59.95 Aligned_cols=39 Identities=28% Similarity=0.181 Sum_probs=24.9
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.- +. +. ..|.++ -+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH------HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999531 11 01 123344 379999999999863
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.026 Score=66.41 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=47.0
Q ss_pred EcCCCCCCCCCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchhHHHH--
Q 007233 276 KASPYPGQNSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQ-- 348 (612)
Q Consensus 276 ~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~-- 348 (612)
.+.|..+..-.+||+...|+|..-... ..+.. -..+.+..+..++++. +++ -++|..||++...-.. .+..
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~~-dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~-~~~a~~ 182 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVNY-DYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLG-TYKAIV 182 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCcccc-cccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCccc-chhhhc
Confidence 344554445569999999999764211 00100 0111233333344331 223 4889999999643211 1100
Q ss_pred ---HH---HhhhhhhcCCCe-EEcCCCCccCC
Q 007233 349 ---FT---AQIEPIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 349 ---f~---~~i~~l~s~vP~-~~v~GNHD~~~ 373 (612)
+. ..+-.++..+.| ..++||||+++
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhccc
Confidence 00 011122233333 45899999985
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.046 Score=50.78 Aligned_cols=80 Identities=11% Similarity=0.159 Sum_probs=43.6
Q ss_pred EEEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 288 RVVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+.++||+|.+...- ..++.+...-....+....+....-|.+.|+||++....... .....++.+-.++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~---~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER---AAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhh---HHHHHHHHcCCcE--EEe
Confidence 467788998875421 112222111111223333333455689999999995443322 3334445443333 789
Q ss_pred CCCCccC
Q 007233 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999964
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0056 Score=61.08 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=41.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||.|.. ...+++++++. .+.|-++++||++.. |..+ .+-++.+. ...+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDr-Gp~s--~~vl~~l~----~~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDR-GPQS--LRCLQLLE----EHWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCC-CcCH--HHHHHHHH----cCCceE
Confidence 89999999864 34566666653 257899999999954 4322 12223322 124678
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999963
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0078 Score=60.06 Aligned_cols=63 Identities=16% Similarity=0.293 Sum_probs=41.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
-|++++||.|.+ ...+++++++. .+.|.++++||+++.+.... +.++.+. .-.++
T Consensus 15 ~ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~ 72 (218)
T PRK09968 15 RHIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFI 72 (218)
T ss_pred CeEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcE
Confidence 389999999854 34456666554 36899999999995433221 2222222 22467
Q ss_pred EcCCCCcc
Q 007233 364 IASGNHER 371 (612)
Q Consensus 364 ~v~GNHD~ 371 (612)
.+.||||.
T Consensus 73 ~v~GNHE~ 80 (218)
T PRK09968 73 SVKGNHEA 80 (218)
T ss_pred EEECchHH
Confidence 89999996
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0025 Score=64.18 Aligned_cols=173 Identities=23% Similarity=0.318 Sum_probs=94.7
Q ss_pred EEEEeCcccccCCc-h------hHHHHHHHh----hhhhhcCCCeEEcCCCCccCCCCC---CCCCCCC--C---CCCcc
Q 007233 329 IVFHIGDICYANGY-I------SQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNK--D---SGGEC 389 (612)
Q Consensus 329 fvl~~GDi~Y~~g~-~------~~wd~f~~~----i~~l~s~vP~~~v~GNHD~~~~~~---~~~y~~~--d---sgge~ 389 (612)
=++..||++.+.|- . .++.+|... +.++.-.+|+|+-.||||.+-... -.+|... + .....
T Consensus 129 GlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~ 208 (392)
T COG5555 129 GLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRS 208 (392)
T ss_pred eEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCc
Confidence 46777899966542 1 122222221 233444799999999999863211 1122100 0 00000
Q ss_pred ccccceeeecCCC--CCCceEEEEEeCCEEEEEEeCCCCC-CCC-HHHHHHHHHHHhhccCCCCCEEEEEEeccc-ccCC
Q 007233 390 GVLAETMFYVPAE--NRAKFWYSTDYGMFRFCVADTEHDW-REG-TEQYKFIEHCLASVDRQKQPWLIFLAHRVL-GYSS 464 (612)
Q Consensus 390 g~~~~~~f~~P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~~-~~~-~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~-~yss 464 (612)
++-++. +.|.. +..+.-||+|+|++|.+-+-+...- .++ ..-+-||+.+|.......+| ++++.|.-. .+++
T Consensus 209 ~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfst 285 (392)
T COG5555 209 DVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFST 285 (392)
T ss_pred CcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceec
Confidence 000100 11211 2234458999999988877543211 011 12357999999875545566 888888632 2343
Q ss_pred CccccC------CCC-----CCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 465 GIFYAV------DGS-----FAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 465 ~~~~~~------~~~-----~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
..|.+. .+. ...+. |..|...++-|+|...+.||.|...-
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccce
Confidence 333221 111 11222 77899999999999999999998743
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.033 Score=68.93 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.+ ..+.. ..+ . .+....|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~--~~~~~--~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEYQ--SSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCCC--CCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 45777999999875 11110 011 1 2233445544 489999999999964
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.055 Score=54.57 Aligned_cols=171 Identities=15% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q 007233 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 404 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
.++||||..|.++ +.|.---...+.+.++ ..+-+ .+.|||=++..+...+.+.. . ..-.-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE---P----RILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH----S----SEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC---C----CcEECCCCCCCCC
Confidence 4799999999999 6554222222222221 13444 47899998743321111000 0 0011124555556
Q ss_pred CceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHH
Q 007233 405 AKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRES 482 (612)
Q Consensus 405 ~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 482 (612)
+.-|..++.++..+.++|-. ..+.+...=+.-+++.|++. +.+.+.+||=+|.=- + . .+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa--T-----------S----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA--T-----------S----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S---H-----------H----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc--H-----------H----HHH
Confidence 78899999999888777743 22222223345556666654 357788888899431 0 0 223
Q ss_pred HHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEE-eCCCCCC
Q 007233 483 LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 483 l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-.-.+.+-+|.+|+-=|+|.-. .+.++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVqT-----aDerI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQT-----ADERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS-B-----S--EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCccC-----chhhc----------cCCCCEEEecCccccCc
Confidence 3445667899999999999832 11111 146888886 7777753
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0098 Score=60.82 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=41.7
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.++||.|.+ ...+++++++. ++.|.++++||++. .|..+ .+.++.+..+. ..+..+.
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 689999854 34566666653 35799999999995 44433 23333433332 3678999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.15 Score=52.13 Aligned_cols=138 Identities=11% Similarity=0.125 Sum_probs=74.4
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h---------cCCccEEEEeCcccccCCc----------------
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~---------~~~pDfvl~~GDi~Y~~g~---------------- 342 (612)
+++++|.+.+... . ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987541 1 1112333333332 1 1345679999999965431
Q ss_pred ---hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccc---eeeecCCCCCCceEEEEEeCCE
Q 007233 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE---TMFYVPAENRAKFWYSTDYGMF 416 (612)
Q Consensus 343 ---~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G~v 416 (612)
..+.+++-+.+..+.+.+|+.+.|||||-....- ....-.+|-.|-. ..+.. -.|. |.|+++++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-----PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL-----PQQPLHRCLFPKSSNYSTLNL----VTNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC-----CCCCCCHHHhhcccccCCcEE----eCCC-eEEEECCE
Confidence 2234445555666778999999999999642100 0000000000000 00111 1122 56999999
Q ss_pred EEEEEeCCCC-----CCCCHHHHHHHHHHHhh
Q 007233 417 RFCVADTEHD-----WREGTEQYKFIEHCLAS 443 (612)
Q Consensus 417 ~fi~Ldt~~~-----~~~~~~Q~~WL~~~La~ 443 (612)
+|++.+...- +.....-.+.|+..|+-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 9998876531 23334446777777763
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.015 Score=60.06 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=39.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--------CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcC
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~ 359 (612)
+++++||.|.. ...++++++.. ...+.+|++||+++......+--.++..+......
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~ 67 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccc
Confidence 68999999854 23344443321 13568999999995443322222222222221112
Q ss_pred CCeEEcCCCCccC
Q 007233 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~v~GNHD~~ 372 (612)
..++++.||||..
T Consensus 68 ~~vv~LrGNHE~~ 80 (304)
T cd07421 68 QRHVFLCGNHDFA 80 (304)
T ss_pred cceEEEecCChHH
Confidence 2478899999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.02 Score=46.98 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=42.5
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+++... ..+++.|+|..... .....-.|+|....+... ....+. ++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD---WQEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE---EEEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee---eeeeee-----------------eeeeeeeee
Confidence 3545554433 47899999998741 111234555554333220 000111 112336789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998753
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.13 Score=60.61 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=29.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCc-cEEEEeCcccccC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYAN 340 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~ 340 (612)
.++|+...|+|..-... ..|.. -....+..+..++++. +++ -++|..||++...
T Consensus 39 ~L~IL~TnDiHg~l~~~-dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGs 97 (780)
T PRK09418 39 NLRILETSDIHVNLMNY-DYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEEEeecCCCCcCc-CccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCc
Confidence 58999999999764311 00110 0011233344444432 223 4889999999543
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.019 Score=57.09 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=40.6
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhc-CCCeEEcC
Q 007233 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s-~vP~~~v~ 366 (612)
.++||+|.. ...+.++++.. ...|.++++||++.. |... .+.+..+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 23455666543 368999999999954 3322 122222222211 45789999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.18 Score=50.91 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=38.0
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+-+++.+++++ ++...+|+..|-...|.. ..... ...+...+.+.++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YPTPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CCCHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 44556666553 347889999996542211 01111 335555556679999999999987643
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.25 Score=58.98 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=77.2
Q ss_pred cceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccc----cCCCCCcc-eeeecCCCCCcEEEEEEeCCCCCCCc
Q 007233 125 GKGSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAF----TNPNAPVY-PRLAQGKTWNEMTVTWTSGYGINEAE 197 (612)
Q Consensus 125 g~~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~----~~~~~p~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 197 (612)
-......+|-+++. +|+|++-.-+..-+-. .|..|++ .-|.+|-+ +.|.... .++++|.|......+...
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~--sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGV--SSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCCCC--CCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccc
Confidence 35566677778886 6887776522111100 1222222 24566666 7775544 799999999875433333
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 198 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 198 ~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
...-|...............++. .|....-.+.+|+|+|.|.+||.....+|.+..|++..|.|
T Consensus 647 ~itgYkIRy~~~~~~~~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT 710 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSREDEVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAET 710 (1381)
T ss_pred eEEEEEEEecccCcccccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccC
Confidence 34444332111100001111111 11111224678999999999998877778877899999998
Q ss_pred CC
Q 007233 278 SP 279 (612)
Q Consensus 278 ~p 279 (612)
+-
T Consensus 711 ~~ 712 (1381)
T KOG4221|consen 711 PE 712 (1381)
T ss_pred cc
Confidence 63
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.32 Score=48.67 Aligned_cols=198 Identities=19% Similarity=0.148 Sum_probs=108.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|++++||+=... |. ....+.+.++.++ -++||+|..|-++ +.|.---|+.|.+.++. .+-+ ++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~dv-iT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GADV-ITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCCE-Eec
Confidence 4899999984221 10 0011233344333 5799999999999 67765556666666543 3333 588
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCC--CCCCC-CHHHHHHHHHHHhh
Q 007233 367 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE-GTEQYKFIEHCLAS 443 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~-~~~Q~~WL~~~La~ 443 (612)
|||=++-++.-.+-...+ . .-.-.+.|....+.-|.-|...+..+.+.+-. ..... -..-++=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999986433211111000 0 00112344444566677788877666665532 11111 12223445666665
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcccc
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 523 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~ 523 (612)
.+ .+++.+||-+|.-- +| | +.-.-++-+..|.+|+-=|+|.-.--+ ++
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------E----K~a~g~yldGrvsavvGTHTHV~TaD~-----rI--------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------E----KNAFGWYLDGRVSAVVGTHTHVPTADE-----RI--------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------h----hhhhheEEcCeEEEEEeccCccccccc-----ee---------
Confidence 43 45677888899542 11 1 011122335679999999999843222 22
Q ss_pred CCCCceEEEE-eCCCCC
Q 007233 524 GTLNGTIHVV-AGGGGA 539 (612)
Q Consensus 524 ~~~~g~vyiv-~G~gG~ 539 (612)
-++|+-|+. +|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 136888886 677775
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.13 Score=59.53 Aligned_cols=85 Identities=20% Similarity=0.261 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHH-------Hhhh
Q 007233 287 QRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFT-------AQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~-------~~i~ 354 (612)
++|+...|+|..-... ..|.. -....+..+..++++. ..--+++..||++..... ..|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMDY-DYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccCC-cccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 7999999999764311 00000 0111223334444332 123588999999964332 1111110 0111
Q ss_pred hhhcCCCe-EEcCCCCccCC
Q 007233 355 PIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 355 ~l~s~vP~-~~v~GNHD~~~ 373 (612)
.++..+.| ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 12233333 35899999975
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.066 Score=55.93 Aligned_cols=181 Identities=20% Similarity=0.299 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCc--------hhHH---HHHHHhhh
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQW---DQFTAQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~--------~~~w---d~f~~~i~ 354 (612)
.|++|-|++|..-. ....++..+-+. ..++|++|..||+---+.. ...+ ..|++...
T Consensus 1 MrIaVqGCcHG~Ld-----------~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELD-----------NIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHH-----------HHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 47899999974310 112233333221 1479999999998632211 1122 23444432
Q ss_pred -hhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEE-----EEEeCCEEEEEEeCC---C
Q 007233 355 -PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWY-----STDYGMFRFCVADTE---H 425 (612)
Q Consensus 355 -~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y-----sfd~G~v~fi~Ldt~---~ 425 (612)
.+.+.+|.+++=||||... +......||=. ..+.|| ...+|++|+-+|+.- +
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGwV--------------ApNIyYlG~agVv~~~gvRIggiSGI~k~~ 130 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGWV--------------APNIYYLGYAGVVNFGGVRIGGISGIYKEH 130 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCcee--------------ccceEEeeecceEEECCEEEeeccchhhhh
Confidence 3456789999999999641 11111111110 123333 467899999888752 3
Q ss_pred CCCCC---------H------HHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC------C-C-----Cchh
Q 007233 426 DWREG---------T------EQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG------S-F-----AEPM 478 (612)
Q Consensus 426 ~~~~~---------~------~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~------~-~-----~~~~ 478 (612)
+|..+ + .-.+.=...|.+. +.|-=|++.|-=+ -.-. .+++.. . + ...+
T Consensus 131 dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie~~~L 205 (456)
T KOG2863|consen 131 DYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQL---KHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIEEGKL 205 (456)
T ss_pred hcccCCCCCCCccchhhhhhhhhhhhhhHHHHhh---cCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHhcCCc
Confidence 33221 0 0001111233332 4565688888633 1111 111100 0 0 0123
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
|...+++||++-+...+|+.|.|.
T Consensus 206 GSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 206 GSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred CChHHHHHHHHhCcchhhhhhHhh
Confidence 456889999999999999999997
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.034 Score=57.28 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=41.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
++.++||.|.. ...++++++++ ...|-++++||++..+.... +-++.+..+. -.+..
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 46899999864 34566666654 25789999999995443221 2233333221 13568
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999963
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.23 Score=57.59 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=42.5
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CC-ccEEEEeCcccccCCchhHHHHHHH-------h
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTA-------Q 352 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~~-------~ 352 (612)
..++|+...|+|..-... ..|.. -....+..+..++++. +. --+++..||++..... ..|..+.. .
T Consensus 24 ~~L~IL~TnDlHg~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDF-DYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCC-ccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcch
Confidence 359999999999764311 00000 0011223334444432 22 2488899999954322 21211100 1
Q ss_pred hhhhhcCCCe-EEcCCCCccCC
Q 007233 353 IEPIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 353 i~~l~s~vP~-~~v~GNHD~~~ 373 (612)
+-.++..+.| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 45899999975
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.31 Score=49.17 Aligned_cols=59 Identities=19% Similarity=0.128 Sum_probs=36.3
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+++.+++++ .+...+|++.|--..|.. ..... ...+..-+.+.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY---------EPTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC---------CCCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 445555543 357889999996542211 00111 234555555578999999999987744
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.089 Score=52.67 Aligned_cols=83 Identities=17% Similarity=0.282 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCC-----CCCcccccccc-hHHHHHHHHHhcCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhc
Q 007233 287 QRVVIFGDMGKDEAD-----GSNEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS 358 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~-----~~~~~~~~~~~-~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s 358 (612)
-+.++++|.|.+-.. |. ..-.+|.. ....+.++++. .+|+-++++||+-.+-+. ..+|+.....++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi-~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGI-NLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCc-ccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 368999999986431 10 00112222 12344555554 689999999999977554 3445433333333222
Q ss_pred CCCeEEcCCCCccC
Q 007233 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~v~GNHD~~ 372 (612)
+ -++.+.||||-.
T Consensus 98 ~-evi~i~GNHD~~ 110 (235)
T COG1407 98 R-EVIIIRGNHDNG 110 (235)
T ss_pred C-cEEEEeccCCCc
Confidence 2 599999999975
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.088 Score=55.54 Aligned_cols=67 Identities=19% Similarity=0.165 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---ccEEEEeCcccccCCchhHHHHHHHhhhhhhcC--CCe
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~--vP~ 362 (612)
+++++||+|.. ...+.++++...- -+-.+++||+++ +|..+. +-+..+-.+.-. --+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVD-RG~~s~--Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVD-RGKRSI--EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccC-CCCCcH--HHHHHHHHHhhcCCCcE
Confidence 58999999854 3456667765322 267999999995 443221 122222111112 237
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.59 Score=53.93 Aligned_cols=40 Identities=23% Similarity=0.357 Sum_probs=34.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.+++++||+|||.|.+||......|-+..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5688999999999999999876666667799999999875
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.2 Score=52.66 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CccEEEEeCcccccCCchhHHHHHHHhhhhhhcCC--CeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~v--P~~ 363 (612)
+++++||+|.. ...+.++++... ..+-++++||+++ .|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999854 234555655433 3488999999994 44322 12222222222223 478
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.18 E-value=1.3 Score=46.80 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007233 478 MGRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
.+.+.+...+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.78 Score=36.81 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=25.5
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFK 276 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~ 276 (612)
-...+.+.+|.|++.|.++|.....++...|+....|+
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~~ 92 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCccccccc
Confidence 34667789999999999999865433333444434443
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.26 Score=53.01 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--Cc-cEEEEeCcccccCCchhHHHHHHHhhhhhhc--CCCe
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s--~vP~ 362 (612)
++.++||+|.. ...+.++++... .. +.++++||+++ .|..+. +-+..+..+.- .--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~Sl--Evl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWGL--ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEeccccC-CCCChH--HHHHHHHHHhhccCCeE
Confidence 58999999854 345666666532 22 35899999994 453221 22222222211 2347
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.47 Score=49.00 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=40.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++. .|.... +-+..+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s~--e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFSI--EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccC-CCCChH--HHHHHHHHHHhcCCCCEE
Confidence 58999999854 33455555542 34678999999994 443221 222222111 1123578
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 899999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=92.19 E-value=1.5 Score=40.53 Aligned_cols=86 Identities=26% Similarity=0.304 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCce
Q 007233 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 559 (612)
Q Consensus 480 r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~ 559 (612)
.+.|.-|-++.+||+.++||+|.++... -+|-.||--|++-.... . +.......
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~P 149 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVP 149 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCC
Confidence 3466777778999999999999988763 24667777776532211 1 11111456
Q ss_pred eEEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007233 560 GFVKLTAFDHSNLLFEYKKSSDGKV-YDSFRISR 592 (612)
Q Consensus 560 Gy~~l~v~n~~~l~~~~~~~~dG~v-~D~f~i~k 592 (612)
.|+.+++ .++.+..-.++--||+| +|..+..|
T Consensus 150 SFvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 150 SFVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ceEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 7899998 55555443344567775 45554443
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.42 Score=49.73 Aligned_cols=24 Identities=8% Similarity=0.199 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 213 g~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 213 GQDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred CHHHHHHHHHHCCCeEEEEcCccc
Confidence 578999999999999999999844
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.29 Score=53.94 Aligned_cols=54 Identities=15% Similarity=0.165 Sum_probs=37.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g 341 (612)
..+||++..|.|.+-..... .....+..++.+|+.- .+++|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 45999999999986432111 1123456677766542 368999999999997763
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.53 Score=49.63 Aligned_cols=23 Identities=13% Similarity=0.436 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHhcCCeEEEecCc
Q 007233 478 MGRESLQKLWQKYKVDIAIYGHV 500 (612)
Q Consensus 478 ~~r~~l~~l~~k~~VdlvlsGH~ 500 (612)
.+.+++...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 34789999999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.52 Score=49.25 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 221 g~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 221 GKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred CHHHHHHHHHHcCCeEEEECCccc
Confidence 578999999999999999999844
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.73 Score=50.51 Aligned_cols=82 Identities=16% Similarity=0.296 Sum_probs=51.3
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh---cCCccEEEEeCcccccCC-c------------hhHHHH
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD---LKNIDIVFHIGDICYANG-Y------------ISQWDQ 348 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~pDfvl~~GDi~Y~~g-~------------~~~wd~ 348 (612)
..+++++++|.|.+.. ++.. ......++++.-. +.+...++.+||++..-| + ..|+++
T Consensus 224 e~v~v~~isDih~GSk----~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred cceEEEEEeeeecccH----HHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 4588999999998642 2210 1111222222211 134579999999996432 1 235666
Q ss_pred HHHhhhhhhcCCCeEEcCCCCccC
Q 007233 349 FTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 349 f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
+-+.+..+-..+-+++.|||||..
T Consensus 298 ~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 298 LAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHhhCCCCceEEEecCCCCcc
Confidence 666666666678899999999975
|
|
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.98 E-value=13 Score=44.98 Aligned_cols=191 Identities=15% Similarity=0.092 Sum_probs=104.0
Q ss_pred ccceecccCccccEEEEEEeCC-----CCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccCCCCcccc
Q 007233 50 SPAVVGLKGQNSEWVTVEYSSP-----NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 124 (612)
Q Consensus 50 ~~~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 124 (612)
.|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-..|
T Consensus 719 ~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~--- 788 (1051)
T KOG3513|consen 719 NPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF--- 788 (1051)
T ss_pred CCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc---
Confidence 4444444455668899999984 344556777788875541 1110001001113566776543233
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEE
Q 007233 125 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQW 202 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~y 202 (612)
=.-.++++.+|.+-+=. ..++.+.-|+.= .-+.+|..+.+ ..-+.++|.|.|....- .....-.|+|
T Consensus 789 tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y 857 (1051)
T KOG3513|consen 789 TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVKY 857 (1051)
T ss_pred ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEEE
Confidence 34578888888875322 223444445432 12445655553 44557999999954321 2234567888
Q ss_pred eecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 203 GRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 203 g~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
....+... ...... -.+-.-.+.|+||+|+|.|.+.|..-..-|.+.-|...+-+|.+.
T Consensus 858 ~~~~~~~~--~~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~ 916 (1051)
T KOG3513|consen 858 WKINEKEG--SLSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKA 916 (1051)
T ss_pred EEcCCCcc--ccccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCC
Confidence 76544321 011110 113445678999999999999998654334333344444445443
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.71 E-value=0.69 Score=48.84 Aligned_cols=24 Identities=13% Similarity=0.313 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.+...+++++.++++=||.-.
T Consensus 232 g~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 232 GPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred CHHHHHHHHHHcCCcEEEECCccc
Confidence 578899999999999999999843
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.76 Score=48.22 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 214 g~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 214 GAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred CHHHHHHHHHHCCCcEEEEcChhh
Confidence 478999999999999999999844
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.85 E-value=0.73 Score=48.16 Aligned_cols=24 Identities=13% Similarity=0.300 Sum_probs=21.2
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 578899999999999999999843
|
|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=88.04 E-value=4 Score=45.82 Aligned_cols=93 Identities=19% Similarity=0.338 Sum_probs=61.2
Q ss_pred EEEEEeC---CCCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccCCCCcccccc---eEEEEE---Ee
Q 007233 64 VTVEYSS---PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGK---GSLKLM---LI 134 (612)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 134 (612)
|+..|+- ..|+..||||||=-.-.+. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 345788888642 244 4443 478886 44
Q ss_pred ec-ccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCC
Q 007233 135 NQ-RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGK 178 (612)
Q Consensus 135 n~-r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~ 178 (612)
+. =..|.|+|... .-.++++|.|..|..|+ |.-.-+++..
T Consensus 84 k~~~e~YqfcYv~~---~g~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQ---KGEVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECC---CccEEEecCCcccCCCC-ccccceeecc
Confidence 43 23588888763 34688999999998765 5555455544
|
This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region []. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.27 E-value=3.4 Score=46.45 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeE-EEecCccc
Q 007233 431 TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDI-AIYGHVHN 502 (612)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~Vdl-vlsGH~H~ 502 (612)
-.|.+|-.+.++. .+..-+|+++|.|. ..+ . +. .-.+.++...+ ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~~------~---e~--~~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RDD------D---EW--KSLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--ccc------h---hh--hhHHHHHhhhCCCCceEEECchhhh
Confidence 4577887777765 46666899999996 211 0 11 11333344444 6788 99999998
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=86.14 E-value=2 Score=43.55 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007233 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
+.+.+++++++++ ++..++||+.|--..|.. ...+. ..++...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888875 568899999995431211 11222 3456566666899999999999977553
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=86.00 E-value=5.4 Score=30.59 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007233 240 IHTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.09 E-value=25 Score=43.04 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=73.8
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeCCC------CCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC
Q 007233 124 TGKGSLKLMLINQRS--DFSVALFSGGL------LKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 195 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~f~~~~------~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~ 195 (612)
++.| +.+.+.|.-- -|.|+.-.-+. +.|..| . +.|..|.+ .=+..-.+.++.|+|....- .
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV--~-----t~pEgp~~-~~a~ats~~ti~v~WepP~~--~ 547 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKV--T-----TQPEGPVQ-LQAYATSPTTILVTWEPPPF--G 547 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCcccCCccCCceEE--e-----cCCCCCcc-ccccccCcceEEEEecCCCC--C
Confidence 4555 7777777554 67777655221 122222 2 23446666 33344568999999998752 1
Q ss_pred CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007233 196 AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 275 (612)
Q Consensus 196 ~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 275 (612)
..+...|..--... ....-..++ .--++.+|.||+|.|+|.|||......|.+.-|..-+|
T Consensus 548 n~~I~~yk~~ys~~--~~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V 608 (1381)
T KOG4221|consen 548 NGPITGYKLFYSED--DTGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITV 608 (1381)
T ss_pred CCCceEEEEEEEcC--CCCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEE
Confidence 23455554210000 000011111 12466788999999999999998766677666888889
Q ss_pred EcCC
Q 007233 276 KASP 279 (612)
Q Consensus 276 ~T~p 279 (612)
+|..
T Consensus 609 ~Tls 612 (1381)
T KOG4221|consen 609 RTLS 612 (1381)
T ss_pred Eecc
Confidence 9874
|
|
| >PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi | Back alignment and domain information |
|---|
Probab=81.81 E-value=21 Score=37.39 Aligned_cols=19 Identities=26% Similarity=0.378 Sum_probs=16.7
Q ss_pred EEecCCCCCCEEEEEEeee
Q 007233 243 SFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+|.||+||+.|-..|...
T Consensus 262 etI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eecccCCCCcEEEEEEEEe
Confidence 4799999999999999875
|
The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=81.78 E-value=2.7 Score=41.24 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=42.2
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh---cCCccEEEEeCcccccCCch---------hHH-HHHHH----
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD---LKNIDIVFHIGDICYANGYI---------SQW-DQFTA---- 351 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~pDfvl~~GDi~Y~~g~~---------~~w-d~f~~---- 351 (612)
|++++|.+.... ....+.++.+++. ..+|+.+|++|+++...... ... ..+.+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888887632 1124556666653 24699999999999753321 111 12222
Q ss_pred hhhhhhcCCCeEEcCCCCccC
Q 007233 352 QIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 352 ~i~~l~s~vP~~~v~GNHD~~ 372 (612)
.++.+...+++..+||+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 234455688999999999975
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 612 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-15 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-15 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-15 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 5e-13 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-107 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-105 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-37 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 6e-25 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 4e-10 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 6e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 1e-05 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-107
Identities = 95/444 (21%), Positives = 162/444 (36%), Gaps = 55/444 (12%)
Query: 165 NPNAPVYPRLAQGKTW-NEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 223
NAP + QG + ++WT+ Y A W + + +T+ +
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN 80
Query: 224 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283
+IH +K+L + Y Y++G ++ F P PG
Sbjct: 81 YTS-----------AFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPPKPGP 123
Query: 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
+ + GD+G+ + S T Q+ V +GD+ Y+N +
Sbjct: 124 DVPYVFGLIGDIGQT------------HDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWP 171
Query: 344 ----SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 399
++WD + E + P++ +GNHE D Y + V +
Sbjct: 172 NHDNNRWDTWGRFSERSVAYQPWIWTAGNHEID-------YAPDIGEYQPFVPFTNRYPT 224
Query: 400 PAENRA---KFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLA 456
P E WY+ V + + + + QYK+ L V+R + PWLI L
Sbjct: 225 PHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLV 284
Query: 457 HRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICT- 515
H L S Y E M R + + YKVDI GHVH+YER+ +
Sbjct: 285 HAPLYNSYEAHYMEG----EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339
Query: 516 NKEKNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL 572
K + +++ G GG +E T Q ++S +R+ +G + ++
Sbjct: 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHA 399
Query: 573 LFEYKKSSDGKVY--DSFRISRDY 594
F + ++ DG DS + Y
Sbjct: 400 HFSWHRNQDGASVEADSLWLLNRY 423
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 323 bits (829), Expect = e-105
Identities = 93/444 (20%), Positives = 162/444 (36%), Gaps = 56/444 (12%)
Query: 165 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 223
NAP + QG M ++W + + V++ + R G ++
Sbjct: 15 GYNAPQQVHITQGDLVGRAMIISWVTMD--EPGSSAVRYWSEKNGRKRIAKGKMS----- 67
Query: 224 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283
G+IH + +++L N Y Y+VG R + + F P G
Sbjct: 68 -----TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN------TTRRFSFITPPQTGL 116
Query: 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
+ + GD+G+ + S T K V +GD+ YA+ Y
Sbjct: 117 DVPYTFGLIGDLGQS------------FDSNTTLSHYELSPKKGQTVLFVGDLSYADRYP 164
Query: 344 S----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV 399
+ +WD + E + P++ +GNHE + + + + E ++V
Sbjct: 165 NHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE-------FAPEINETEPFKPFSYRYHV 217
Query: 400 PAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLA 456
P E + + FWYS V + + GT QY +++ L V R + PWLI L
Sbjct: 218 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277
Query: 457 HRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC-T 515
H L S + E M R + + KYKVD+ GHVH YER+ +
Sbjct: 278 HSPLYNSYNHHFMEG----EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKI 332
Query: 516 NKEKNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL 572
+ +++ G G + Q +S +R+ +G + ++
Sbjct: 333 TNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 392
Query: 573 LFEYKKSSDGKVY--DSFRISRDY 594
F + ++ DG DS +
Sbjct: 393 HFSWNRNQDGVAVEADSVWFFNRH 416
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-37
Identities = 55/330 (16%), Positives = 96/330 (29%), Gaps = 54/330 (16%)
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 347
R V GD G + + + A+ ++ L D + +GD Y G D
Sbjct: 8 RFVAVGDWGG--VPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKD 64
Query: 348 -QFTAQIE-----PIASTVPYMIASGNHE-RDWPGTGSFYGNKDSGGECGVLAETM-FYV 399
+F E P VP+ + +GNH+ Y + F +
Sbjct: 65 KRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKI 124
Query: 400 PAENRAKFWYSTDYGMFRFCVAD-------TEHDWREGTEQYKFIEHCLASVDRQKQPWL 452
P N + + D D + Q +I+ LA+ K+ ++
Sbjct: 125 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYV 181
Query: 453 IFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQN 512
+ H + +S + + L L +KV + GH HN +
Sbjct: 182 LVAGHYPV-WSIA-EHGPTHCL-----VKQLLPLLTTHKVTAYLCGHDHNLQYLQDE--- 231
Query: 513 ICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTT-------WSLYRDYDYGFVKLT 565
NG V++G G L+ + GF +
Sbjct: 232 --------------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE 277
Query: 566 AFDHSNLLFEYKKSSDGKVYDSFRISRDYR 595
+ Y + GK ++ R R
Sbjct: 278 -ITPKEMSVTY-IEASGKSLFKTKLPRRAR 305
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 6e-25
Identities = 44/343 (12%), Positives = 95/343 (27%), Gaps = 71/343 (20%)
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICY---ANGYIS 344
R GD GKD Q + +Q I++ + + + G
Sbjct: 5 RFASLGDWGKD--------TKGQILNAKYFKQFIKNER-VTFIVSPGSNFIDGVKGLNDP 55
Query: 345 QWDQFTAQI---EPIASTVPYMIASGNHE--RDWPGTGSFYGNKDSGGECGVLAETMFYV 399
W + E +P+ G + ++ E
Sbjct: 56 AWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADA 115
Query: 400 PAENR--------------------AKFWYSTDYGMFRFCVADT-----EHDWREGTE-Q 433
+ + F DT +++ E
Sbjct: 116 TNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKA 175
Query: 434 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD 493
+ ++ L+ + ++I + + + Y+ S L L + +VD
Sbjct: 176 WNDLKSQLSVAKKIA-DFIIVVGDQPI-------YSSGYSRGSSYLAYYLLPLLKDAEVD 227
Query: 494 IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSL 553
+ I GH +N E N H+ G G + ++ + SL
Sbjct: 228 LYISGHDNNMEVIED------------------NDMAHITCGSGSMS-QGKSGMKNSKSL 268
Query: 554 YRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 596
+ D GF ++ ++ ++ S G+V + +++ +
Sbjct: 269 FFSSDIGFCVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 4e-10
Identities = 32/248 (12%), Positives = 70/248 (28%), Gaps = 44/248 (17%)
Query: 313 SLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPYMIASGNH 369
S T + D++ D++ GD+ NG + ++ ++ + + + GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 370 ERDWPGTGSFYGNKDSGGECGVLAETMFY--------VPAENRAKFWYSTD-YGMFRFCV 420
+ + P F +K + + + + Y +
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 421 ADT------------EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY 468
DT + +I+ A + + L H + ++ I
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI-- 253
Query: 469 AVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNG 528
+ + + +D ++ GH+H QNI K T
Sbjct: 254 ---QKGYTINYNQQVIDALTEGAMDFSLSGHIH--------TQNI------RSAKSTDGK 296
Query: 529 TIHVVAGG 536
I +
Sbjct: 297 EITDIVTN 304
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 31/211 (14%), Positives = 61/211 (28%), Gaps = 47/211 (22%)
Query: 308 DFQYASLNTTRQL---IQDLK----NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST- 359
Y +++ +L ++ L D + GD+ G + + + +EP A+
Sbjct: 41 RRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQL 99
Query: 360 -VPYMIASGNH-ERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFR 417
+ GNH +R L + + R
Sbjct: 100 GAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAP-LDRVCMIDGLR 140
Query: 418 FCVADT----EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 473
V DT H Q ++ LA ++ L H +
Sbjct: 141 IIVLDTSVPGHHHGEIRASQLGWLAEELA--TPAPDGTILALHHPPI--------PSVLD 190
Query: 474 FAEPMG---RESLQKLWQKYKVDIAIYGHVH 501
A + + +L ++ + V + GH+H
Sbjct: 191 MAVTVELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 30/210 (14%), Positives = 58/210 (27%), Gaps = 42/210 (20%)
Query: 307 NDFQYASLNTTRQLIQDLKNI-------DIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
+ Y ++ + + D V GDI G ++ + +
Sbjct: 15 GEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIV-NCGRPEEYQVARQILGSL--N 71
Query: 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 419
P + GNH D L + ++ + D R
Sbjct: 72 YPLYLIPGNH--DDKALFL-----------EYLQPLCPQLGSDAN-NMRCAVDDFATRLL 117
Query: 420 VADT----EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 475
D+ E ++E L + +P IF+ H L + +
Sbjct: 118 FIDSSRAGTSKGWLTDETISWLEAQLF--EGGDKPATIFMHHPPL--------PLGNAQM 167
Query: 476 EPMG---RESLQKLWQKYK-VDIAIYGHVH 501
+P+ L L +++ + GH H
Sbjct: 168 DPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 2e-06
Identities = 72/549 (13%), Positives = 155/549 (28%), Gaps = 148/549 (26%)
Query: 27 HPLSRI----AIRKATYALNDNAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDD----- 77
+ +SR+ +R+A L V + G+ G WV ++ + V
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNV----LIDGVLGSGKTWVALDVCL-SYKVQCKMDFK 183
Query: 78 --WIAV---FSP-----------SNFSASTCSAENPSVNPPLLCSAPIKYQYANY-SSPQ 120
W+ + SP + S + S N L + I+ + S
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS-IQAELRRLLKSKP 242
Query: 121 YKGTGKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTW 180
Y + L L+L+N ++ + F+ KI T V L+ T
Sbjct: 243 Y----ENCL-LVLLNVQNAKAWNAFNLSC----------KILLTTRFKQVTDFLSAATTT 287
Query: 181 NEMTVTWTSGYGINEAEA-FVQW-GRKGGD-----RTHSPAGTLTFDRGSMCGA-----P 228
+ + +E ++ +++ + D T +P S+
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP---RRL---SIIAESIRDGL 341
Query: 229 ARTVGWRDPGY-----IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF-KASPYPG 282
A W+ I S L L P ++F+ + F ++ P
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYR------KMFDRLSV------FPPSAHIPT 389
Query: 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY 342
L +I+ D+ K + N SL + + K I I Y
Sbjct: 390 I-LLS--LIWFDVIKSDVM--VVVNKLHKYSL-----VEKQPKESTISIP--SI-----Y 432
Query: 343 ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402
+ ++E + ++ N + + D Y
Sbjct: 433 LE----LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ------------Y---- 472
Query: 403 NRAKFWYSTDYGMFRFCVADTEHDWREGTEQY---KFIEHCLASVDRQKQPW-----LIF 454
+YS + + + +F+E + W ++
Sbjct: 473 -----FYS--HIGHHLKNIEHPERMTLFRMVFLDFRFLE---QKIRHDSTAWNASGSILN 522
Query: 455 LAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 514
++ Y I D + + ++ K + ++ + T + +
Sbjct: 523 TLQQLKFYKPYIC-DNDPKYERLV--NAILDFLPKIEE------NLICSKYTD-LLRIAL 572
Query: 515 TNKEKNYYK 523
+++ ++
Sbjct: 573 MAEDEAIFE 581
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 46.5 bits (109), Expect = 1e-05
Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 69/277 (24%)
Query: 288 RVVIFGDM----GKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANG 341
+ D+ +D + + S + R + + + V +GDI +G
Sbjct: 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDG 64
Query: 342 YISQWDQFTAQIEPIAST-----VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETM 396
+ + D ++ + + V GNHE S ++ + + T
Sbjct: 65 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ---RTGTD 121
Query: 397 FYVPAENRAKFWYS-TDYGMFRFCVADT-------------------------------- 423
+ Y + FRF + D
Sbjct: 122 TGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDL 181
Query: 424 --------------EHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 469
+ + +Q ++++ L D +++ LIF V ++
Sbjct: 182 NLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAA----- 236
Query: 470 VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506
D L L V I GH H+ R
Sbjct: 237 -DPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRC 272
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.74 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.49 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.39 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.31 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.25 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.25 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.24 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.24 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.18 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.03 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.01 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.01 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.99 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.93 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.7 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.7 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.68 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.64 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.63 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.62 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.11 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.11 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.02 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.85 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.82 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.82 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.79 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.72 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.62 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.54 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.41 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.36 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.23 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.2 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 97.2 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 97.2 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.18 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.13 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 97.12 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.11 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.08 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.04 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 97.0 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.99 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.93 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.92 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.92 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.91 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.91 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.9 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.85 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.81 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.79 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.77 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 96.76 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.74 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.73 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.68 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.66 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.65 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.57 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.56 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.55 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.55 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.49 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.46 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.43 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.41 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 96.4 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.4 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.3 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.28 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.27 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.27 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 96.26 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.22 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.22 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.19 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.18 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 96.18 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.13 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.12 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.1 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.1 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 96.07 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.05 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.04 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.01 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.01 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.95 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.94 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.94 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.93 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 95.85 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.84 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.84 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.82 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.82 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.82 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.78 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 95.77 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.73 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.7 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 95.68 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.65 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 95.64 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 95.6 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 95.59 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 95.59 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.58 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.55 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.54 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.5 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.43 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.41 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.38 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.36 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.34 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.33 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.29 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.25 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.24 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.23 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.15 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.12 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.12 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 95.09 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 94.98 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.94 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.87 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.81 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 94.8 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.76 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 94.72 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.61 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 94.59 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.56 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 94.56 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.54 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 94.51 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 94.45 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.45 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 94.43 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.38 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.27 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.21 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.17 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.12 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.03 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.02 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 93.83 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 93.75 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 93.54 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 93.39 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 93.26 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 93.17 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 93.12 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 93.12 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.96 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 92.86 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 92.83 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 92.71 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 92.46 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.29 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 92.21 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 92.09 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 92.08 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 91.84 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 91.75 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.59 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.97 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 90.26 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 89.98 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 89.93 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 89.68 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 89.67 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.63 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 89.36 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 89.26 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 89.05 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 89.0 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 88.8 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 88.38 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 87.06 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 87.04 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 86.73 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 86.33 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 85.79 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 85.12 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 83.89 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 83.36 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 82.89 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 82.59 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 81.68 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 81.46 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 81.42 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 80.84 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-61 Score=527.60 Aligned_cols=386 Identities=24% Similarity=0.401 Sum_probs=308.5
Q ss_pred CCCCCcceeeecCCCC-CcEEEEEEeC-CCCCCCccEEEEeecCCCCcccc-CcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTW-NEMTVTWTSG-YGINEAEAFVQWGRKGGDRTHSP-AGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~-~~m~V~W~t~-~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
++++|+|+||++++++ ++|+|+|+|. .. ++.+.|+||++++.....+ +.+.+|...+ ..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEecC-----------CcCCEEE
Confidence 5679999999999984 9999999997 43 4678999998776544333 2223333211 2468999
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHH
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI 321 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (612)
+|+|+||+|||+|+|||+.. .||+.++|+|+|.++...++||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 48999999999987777889999999998641 1245677776
Q ss_pred HhcCCccEEEEeCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceee
Q 007233 322 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMF 397 (612)
Q Consensus 322 ~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
+...+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 643489999999999998765 5679999999999988999999999999864210 0 0012224567788
Q ss_pred ecCCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCC
Q 007233 398 YVPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSF 474 (612)
Q Consensus 398 ~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~ 474 (612)
.||.+ ...+.||+|++|+++||+|||+.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 89853 2457899999999999999999887778999999999999987778999999999999 77654322222
Q ss_pred CchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccC--CCccccCCCCceEEEEeCCCCCCC--C-CCCCCCC
Q 007233 475 AEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK--EKNYYKGTLNGTIHVVAGGGGAGL--A-EFTPLQT 549 (612)
Q Consensus 475 ~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~--~~~~y~~~~~g~vyiv~G~gG~~l--~-~~~~~~~ 549 (612)
+.+ |+.|+++|++++||++|+||+|.|||++|++++++... ....| .+.+|++||++|+||+.. . .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 89999999999999999999999999999998764211 11122 136799999999999763 2 4556788
Q ss_pred CcceeeeCceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCC
Q 007233 550 TWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDY 594 (612)
Q Consensus 550 ~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~ 594 (612)
+|++|+..+|||++|++.|+++|.++|+++.||+ |+|+|||.|.+
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-60 Score=519.82 Aligned_cols=389 Identities=25% Similarity=0.391 Sum_probs=305.1
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
++++|.|+||+++++ .++|+|+|+|... .+.+.|+||+.++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4578999999876554433332 3343211 24689999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 322 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 322 (612)
|+|+||+|||+|+|||+.. .||+.++|+|+|.++...++||+++||+|... +..++++.+.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999963 37899999999988777789999999998642 12345666665
Q ss_pred hcCCccEEEEeCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeee
Q 007233 323 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFY 398 (612)
Q Consensus 323 ~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 398 (612)
...++|||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ........+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---I----NETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---G----TBCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---c----cccccchhhhhhcc
Confidence 33489999999999998763 4579999999999888999999999999864210 0 00001234567788
Q ss_pred cCCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCC
Q 007233 399 VPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 475 (612)
Q Consensus 399 ~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~ 475 (612)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 3457899999999999999999877666799999999999987777899999999999 76543211111
Q ss_pred chhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccC--CCccccCCCCceEEEEeCCCCCCCC---CCCCCCCC
Q 007233 476 EPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK--EKNYYKGTLNGTIHVVAGGGGAGLA---EFTPLQTT 550 (612)
Q Consensus 476 ~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~--~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~~ 550 (612)
..+ |+.|+++|++++||++|+||+|.|||++|+++.+.... ....+ .++++++||++|+||+... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 344 88999999999999999999999999999987543211 11112 2467999999999998642 45567889
Q ss_pred cceeeeCceeEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEeCCCCc
Q 007233 551 WSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKV--YDSFRISRDYRDI 597 (612)
Q Consensus 551 ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v--~D~f~i~k~~~~~ 597 (612)
|++|+...|||++|++.|+++|.++|+++.||++ .|+|+|.|++..-
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999999999999999999999999999999997 5999999986543
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=319.34 Aligned_cols=381 Identities=18% Similarity=0.229 Sum_probs=234.2
Q ss_pred CcceeeecCCC-CCcEEEEEEeCCCC-------CCCccEEEEeecCCCCcc--ccCcceEEecCCcCCCCccceeccCCC
Q 007233 169 PVYPRLAQGKT-WNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTH--SPAGTLTFDRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 169 p~~~~La~~~~-~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~--~~~~~~t~~~~~mcg~pa~~~g~~~~g 238 (612)
|...-++.|+. ++++ |.|+.-... ......|+|....+.... ...++.+ .. -+.+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~-a~-------------~~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEM-AK-------------PSLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEE-EC-------------GGGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEE-ec-------------CCCc
Confidence 44445667775 5666 679875321 012457777765544332 2222211 10 1246
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCC-CCeEEEEEeecCCCCCCCCCcccccccchHHHH
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQN-SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTT 317 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~ 317 (612)
++|+|.|+||+|||+|+|||+.. ..+|++++|+|+|.++.. .++||+++||.+... +..+++
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~ 135 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAY 135 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHH
T ss_pred eEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHH
Confidence 89999999999999999999974 247999999999987653 579999999997631 112456
Q ss_pred HHHHHhcCCccEEEEeCcccccCCch--------------------h----HHHHHH--HhhhhhhcCCCeEEcCCCCcc
Q 007233 318 RQLIQDLKNIDIVFHIGDICYANGYI--------------------S----QWDQFT--AQIEPIASTVPYMIASGNHER 371 (612)
Q Consensus 318 ~~i~~~~~~pDfvl~~GDi~Y~~g~~--------------------~----~wd~f~--~~i~~l~s~vP~~~v~GNHD~ 371 (612)
..|.+ .++|||||+||++|+++.. . .|.+++ ..++.+.+.+|+|+++||||+
T Consensus 136 ~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 136 KHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp HHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred HHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 66665 6899999999999997642 1 122222 235667789999999999999
Q ss_pred CCCCCCCCCCCCCCCCcc----ccccceee-ecCCC-------CCCceEEEEEeCC-EEEEEEeCCCCCC----------
Q 007233 372 DWPGTGSFYGNKDSGGEC----GVLAETMF-YVPAE-------NRAKFWYSTDYGM-FRFCVADTEHDWR---------- 428 (612)
Q Consensus 372 ~~~~~~~~y~~~dsgge~----g~~~~~~f-~~P~~-------~~~~~~Ysfd~G~-v~fi~Ldt~~~~~---------- 428 (612)
..+............+.. ..+++.+| .||.. .....||+|++|+ ++||+|||+....
T Consensus 214 ~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 214 ENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp STTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred cCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 742111100000000000 00122222 34422 3457899999999 9999999975321
Q ss_pred ------------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcccc------CCCCCCchhhHHHHHHHHHhc
Q 007233 429 ------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA------VDGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 429 ------------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~------~~~~~~~~~~r~~l~~l~~k~ 490 (612)
.+.+|++||+++|++ ++++|+||+.|+|+ +......+ .+..-.-...|+.|+++|.++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~ 369 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSK 369 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHh
Confidence 368999999999997 57899999999999 65432111 011000122389999999999
Q ss_pred CCe--EEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCC--CC--CCCCCCCC---CCCCcceeeeCceeE
Q 007233 491 KVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG--GG--AGLAEFTP---LQTTWSLYRDYDYGF 561 (612)
Q Consensus 491 ~Vd--lvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~--gG--~~l~~~~~---~~~~ws~~~~~~~Gy 561 (612)
+|+ ++|+||+|.+++.....+.. ... ....++-+++++. +| ..+..... ...++..|.+...||
T Consensus 370 ~v~n~vvLsGDvH~~~~~~~~~~~~---~p~----~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy 442 (527)
T 2yeq_A 370 NLNNVVVLTGDVHASWASNLHVDFE---KTS----SKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGY 442 (527)
T ss_dssp TCCCEEEEECSSSSEEEEEEESSTT---CTT----SCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEE
T ss_pred CCCCEEEEEcchHHHhHhhcccccc---CCC----CCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCE
Confidence 994 99999999999986321110 000 0001333333321 11 11100000 011233455578999
Q ss_pred EEEEEecCCeEEEEEEE-----CCCCc--EEEEEEEEeCCC
Q 007233 562 VKLTAFDHSNLLFEYKK-----SSDGK--VYDSFRISRDYR 595 (612)
Q Consensus 562 ~~l~v~n~~~l~~~~~~-----~~dG~--v~D~f~i~k~~~ 595 (612)
++|++ +.+.++++|+. +.++. ..-+|++....+
T Consensus 443 ~~v~v-t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~~ 482 (527)
T 2yeq_A 443 VRCTV-TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQT 482 (527)
T ss_dssp EEEEE-ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSSTT
T ss_pred EEEEE-eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCCc
Confidence 99999 78999999875 22333 444566655433
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=305.87 Aligned_cols=264 Identities=19% Similarity=0.291 Sum_probs=186.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCc----hhHHHHHHHhh-hhh--hc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQI-EPI--AS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i-~~l--~s 358 (612)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++.+ +.+ ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997521 233333444555543 789999999999998 54 44555433332 222 34
Q ss_pred CCCeEEcCCCCccCCCCCC------CCCCCCC----CCCccccccceeeecCCCCCCceEEEE----Ee---------C-
Q 007233 359 TVPYMIASGNHERDWPGTG------SFYGNKD----SGGECGVLAETMFYVPAENRAKFWYST----DY---------G- 414 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~------~~y~~~d----sgge~g~~~~~~f~~P~~~~~~~~Ysf----d~---------G- 414 (612)
.+|+++++||||+...... ..|...+ ...........||.||. .||++ .. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998632100 0010000 00001122457899984 46654 32 3
Q ss_pred ---CEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHH
Q 007233 415 ---MFRFCVADTEHDWR----------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRE 481 (612)
Q Consensus 415 ---~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~ 481 (612)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+ |++..+ + . ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~---~-~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-R---G-SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-C---C-CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-C---C-cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 877532 1 1 1233 88
Q ss_pred HHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeE
Q 007233 482 SLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGF 561 (612)
Q Consensus 482 ~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 561 (612)
.|++||++|+|+++|+||+|.|+|.++ ++++||++|+||...... ...++|+.|+...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~-~~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKS-GMKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCC-SSCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccC-CCCCCcceeecCCCcE
Confidence 999999999999999999999999863 468999999988764322 1346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007233 562 VKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 596 (612)
Q Consensus 562 ~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+.
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 99999 78999999996699999999999997764
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=263.93 Aligned_cols=265 Identities=20% Similarity=0.263 Sum_probs=177.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-HHHHhhhhhh-----c
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA-----S 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~-----s 358 (612)
..+||+++||+|......... ..+....+.+.+++++ .+|||||++||++|..|....++ +|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred CceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 359999999999875321000 0011122344444443 58999999999998865432222 3444444432 2
Q ss_pred CCCeEEcCCCCccCCCCCCC-CCCCCCCCCccccccceeeecCCCCCCceEEEEEe------CCEEEEEEeCCCC-----
Q 007233 359 TVPYMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY------GMFRFCVADTEHD----- 426 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~----- 426 (612)
.+|+++++||||+....... -|. ....+|.+| ..||++++ ++++||+||+...
T Consensus 82 ~~p~~~v~GNHD~~~~~~~~~~~~----------~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~ 146 (313)
T 1ute_A 82 NVPWHVLAGNHDHLGNVSAQIAYS----------KISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSD 146 (313)
T ss_dssp TCCEEECCCHHHHHSCHHHHHHGG----------GTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGG
T ss_pred CCCEEEECCCCccCCCcccccccc----------ccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCc
Confidence 79999999999985311000 010 012345555 34788888 5899999998641
Q ss_pred ------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007233 427 ------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 427 ------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
...+.+|++||++.|++. +.+|+|+++|+|+ ++.... +. ...+ ++.|.++|++++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~----~~-~~~~-~~~l~~~l~~~~v~~ 216 (313)
T 1ute_A 147 DFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH----GP-THCL-VKQLLPLLTTHKVTA 216 (313)
T ss_dssp GSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS----CC-CHHH-HHHTHHHHHHTTCSE
T ss_pred cccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC----CC-cHHH-HHHHHHHHHHcCCcE
Confidence 012479999999999985 3589999999999 765432 11 1233 788999999999999
Q ss_pred EEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC---CCCCCcceeeeC----ceeEEEEEEe
Q 007233 495 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT---PLQTTWSLYRDY----DYGFVKLTAF 567 (612)
Q Consensus 495 vlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v~ 567 (612)
+|+||+|.+++..+ .+|+.||++|++|....... ....++..|... .+||.+|++
T Consensus 217 ~l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v- 278 (313)
T 1ute_A 217 YLCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI- 278 (313)
T ss_dssp EEECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-
T ss_pred EEECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-
Confidence 99999999998852 25789999999886421110 011234445432 389999999
Q ss_pred cCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007233 568 DHSNLLFEYKKSSDGKVYDSFRISRDYRD 596 (612)
Q Consensus 568 n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
+++.++++|+ +.+|+++|+|+|.|..+.
T Consensus 279 ~~~~~~~~~~-~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 279 TPKEMSVTYI-EASGKSLFKTKLPRRARS 306 (313)
T ss_dssp CSSCEEEEEE-ETTSCEEEEEEECCCC--
T ss_pred EcCEEEEEEE-cCCCcEEEEEEeccccCc
Confidence 7789999998 469999999999997643
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=207.12 Aligned_cols=250 Identities=16% Similarity=0.121 Sum_probs=161.1
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhc-
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s- 358 (612)
...+||++++|+|...... ..+... .....++++++. ..++|+||++||+++ .+...+|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~~--~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGAV--DADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTTB--CHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-cccccc--CHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3469999999999865321 111111 122334444433 258999999999995 4555677777777777643
Q ss_pred -CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHH
Q 007233 359 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQ 433 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q 433 (612)
.+|+++++||||+... +...+.-........+|++++++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRAE------------------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHHH------------------HHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHHH------------------HHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 7999999999997310 00001000111235678999999999999997532 246899
Q ss_pred HHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccce
Q 007233 434 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI 513 (612)
Q Consensus 434 ~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~ 513 (612)
++||++.|++.. +.+ +|+++|||+ +........ . ... ..++.|.+++++++|+++|+||+|..+...
T Consensus 161 ~~wl~~~l~~~~--~~~-~iv~~Hh~p-~~~~~~~~~-~-~~~-~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------ 227 (330)
T 3ib7_A 161 LGWLAEELATPA--PDG-TILALHHPP-IPSVLDMAV-T-VEL-RDQAALGRVLRGTDVRAILAGHLHYSTNAT------ 227 (330)
T ss_dssp HHHHHHHTTSCC--TTC-EEEECSSCS-SCCSSGGGG-G-GSB-SCHHHHHHHHTTSSEEEEEECSSSSCEEEE------
T ss_pred HHHHHHHHHhcc--cCC-eEEEEECCC-CCCCccccc-c-ccc-cCHHHHHHHHhccCceEEEECCCCCcccce------
Confidence 999999999853 333 788888887 544221111 0 111 126789999999999999999999987542
Q ss_pred eccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc
Q 007233 514 CTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 583 (612)
Q Consensus 514 ~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 583 (612)
.+++.+++.|+.+...... .............||..|++ ++..+.++++.-..+.
T Consensus 228 ------------~~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------------FVGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ------------ETTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred ------------ECCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 2467777877766432111 01111222345679999999 6778899988644333
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-21 Score=195.53 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=152.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+...+|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999875321 11110 1112334444432 236899999999995 44456677777777665 6899
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC-CceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHH
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR-AKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFI 437 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL 437 (612)
++++||||...... . .+...| ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~~~-~-------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKALFL-E-------------YLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHHHH-H-------------HHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHHHH-H-------------Hhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 99999999741100 0 000001 111111 23568899999999999997532 2458999999
Q ss_pred HHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceecc
Q 007233 438 EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTN 516 (612)
Q Consensus 438 ~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~ 516 (612)
++.|++. +..++|+++|+|+ +....... +. ... ..++.+.++++++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~~-~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IAC-ENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GSB-TTTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-ccC-cCHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999985 3456999999998 65432111 10 001 1256899999998 89999999999987652
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCc-ceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 517 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTW-SLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
.++..++++++.+.... +. .+.+ +.+.....||..+++ ++..++++++.
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~ 253 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHS 253 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEE
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEe
Confidence 13444555554332211 11 1222 234456689999999 66788888875
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=198.73 Aligned_cols=250 Identities=15% Similarity=0.154 Sum_probs=150.6
Q ss_pred CCeEEEEEeecCCCCCCCCCccc----ccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc-----hhHHHHHHHhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~----~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~-----~~~wd~f~~~i 353 (612)
..+||++++|+|.........+. .+.......++++++.. .+||+||++||+++.... ...++.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 45999999999997643211000 01112233444444432 689999999999965321 22333344444
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEe-CCEEEEEEeCCCC------
Q 007233 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHD------ 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~------ 426 (612)
+.+ .+|+++++||||...-....+.......... ........+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000111332 2456899998 9999999998642
Q ss_pred -------------------C---------------------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCc
Q 007233 427 -------------------W---------------------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI 466 (612)
Q Consensus 427 -------------------~---------------------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~ 466 (612)
| ....+|++||++.|+++.+. ..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC-CCCCC
Confidence 0 12379999999999986421 346899999998 65432
Q ss_pred cccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC
Q 007233 467 FYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
.. ... .. .++.+.++++++ +|+++|+||+|.+++... .+|+.|++.|+.-. .
T Consensus 237 ~~---~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~----~- 289 (322)
T 2nxf_A 237 DP---ICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE----T- 289 (322)
T ss_dssp CG---GGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG----C-
T ss_pred Cc---ccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh----C-
Confidence 10 000 11 267899999999 799999999999988641 24667777665411 0
Q ss_pred CCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 546 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
.....||..+++ ++..+.++.+.
T Consensus 290 ---------~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 290 ---------PPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCcEEEEEE-ECCeEEEEecc
Confidence 123468999998 67788887664
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.2e-16 Score=171.82 Aligned_cols=216 Identities=12% Similarity=0.152 Sum_probs=126.5
Q ss_pred CCCeEEEEEeecCCCCCCC---CCccccc---c-----cchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHH
Q 007233 284 NSLQRVVIFGDMGKDEADG---SNEYNDF---Q-----YASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~---~~~~~~~---~-----~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
+..+||++++|+|...... ...+..+ . ......++++++. ..+||+||++||+++. +....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3469999999999863210 0000000 0 0013344444433 2579999999999954 4445566666
Q ss_pred Hhhhhhhc-CCCeEEcCCCCccCCCCCCCCCCCCC-C-CCccc-cccceeeecCC-------CCCCceEEEEEeCCEEEE
Q 007233 351 AQIEPIAS-TVPYMIASGNHERDWPGTGSFYGNKD-S-GGECG-VLAETMFYVPA-------ENRAKFWYSTDYGMFRFC 419 (612)
Q Consensus 351 ~~i~~l~s-~vP~~~v~GNHD~~~~~~~~~y~~~d-s-gge~g-~~~~~~f~~P~-------~~~~~~~Ysfd~G~v~fi 419 (612)
+.++.+.. .+|+++++||||+....... +.... . ....+ ..+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 66666543 78999999999986321110 00000 0 00000 00111111000 001223445567899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHH
Q 007233 420 VADTEHD------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW 487 (612)
Q Consensus 420 ~Ldt~~~------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~ 487 (612)
+||+... .....+|++||++.|+++.. +...+|+++|+|+ +....... ...... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~-~~~~~~~~--~~~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNL-TDHNDVIQ--KGYTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBS-SCSSCC----CCSBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCC-cccccccc--cccccc-cHHHHHHHH
Confidence 9999742 12357999999999998643 2345899999998 54421111 111111 267899999
Q ss_pred HhcCCeEEEecCcccceee
Q 007233 488 QKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 488 ~k~~VdlvlsGH~H~YeR~ 506 (612)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997754
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.49 E-value=9e-13 Score=129.11 Aligned_cols=173 Identities=12% Similarity=0.118 Sum_probs=98.2
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.+||+++||+|.+. ..++++++.. .++|+|+++||+++......++.++++.++.+ .+|++
T Consensus 5 ~mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEE
T ss_pred eEEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEE
Confidence 47999999999642 1233333322 37999999999996542444455566665543 67999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeC-CEEEEEEeCCC--CCCCC--------HH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG-MFRFCVADTEH--DWREG--------TE 432 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G-~v~fi~Ldt~~--~~~~~--------~~ 432 (612)
+++||||.... .++... .+.+ ..+.....+. + ..+.++ +++|+.++... .+... ..
T Consensus 68 ~v~GNHD~~~~---~~~~~~-~~~~--~~~~~~~~l~-----~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T 1uf3_A 68 YVPGPQDAPIW---EYLREA-ANVE--LVHPEMRNVH-----E--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp EECCTTSCSHH---HHHHHH-HHHH--HHCTTEEECB-----T--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred EECCCCCchhH---HHHHhh-hhhh--ccCcceEEcc-----c--ceEeeCCCcEEecCCCCcCCCCccChhhcccchhh
Confidence 99999997410 000000 0000 0000001110 1 124456 78888887421 11111 22
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007233 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 501 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H 501 (612)
+.+|+++.|++.. ..+.|++.|+|+ +..... ..+.+.+.+++++++++++++||+|
T Consensus 135 ~~~~~~~~l~~~~---~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWELK---DYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGSC---SCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hHHHHHHHHHhCC---CCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 2344555555532 235899999998 543110 1113467788888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.2e-12 Score=126.70 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=95.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhH---------------H----
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ---------------W---- 346 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~---------------w---- 346 (612)
.+||+++||+|.+.. .....++.+.+ .++|+|+++||++........ +
T Consensus 5 ~mri~~iSDlH~~~~-----------~~~~~l~~~~~--~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD-----------LLPKLKGVIAE--KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CCEEEEEECCTTCGG-----------GHHHHHHHHHH--HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred eEEEEEEeecCCChH-----------HHHHHHHHHHh--cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHH
Confidence 479999999997531 11122333322 579999999999954321100 0
Q ss_pred ----HHHHHhhhhhhc-CCCeEEcCCCCccCCCCC-CCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEE
Q 007233 347 ----DQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420 (612)
Q Consensus 347 ----d~f~~~i~~l~s-~vP~~~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 420 (612)
+.+.+.++.+.. .+|+++++||||...... ...+. .. +. +.....+ .+. ..+++++++|++
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~--~~----~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE--AE----TA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH--TT----TT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh--hc----cC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122233333333 589999999999742000 00000 00 00 0000001 011 236788999999
Q ss_pred EeCCCCC-CCCHHHH----HHHH----HHHhhccCCCCCEEEEEEecccccCC-CccccCCCCCCchhhHHHHHHHHHhc
Q 007233 421 ADTEHDW-REGTEQY----KFIE----HCLASVDRQKQPWLIFLAHRVLGYSS-GIFYAVDGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 421 Ldt~~~~-~~~~~Q~----~WL~----~~La~~~r~~~pwvIv~~H~P~~yss-~~~~~~~~~~~~~~~r~~l~~l~~k~ 490 (612)
++..... ....+|. .|+. +.|++. .+ ...|++.|+|+ +.. ........ ...+.+.+.++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~-~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL--KP-RRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS--CC-CEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc--CC-CCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9743210 0011222 1433 334432 12 34688999998 543 11100000 111245788888899
Q ss_pred CCeEEEecCcc
Q 007233 491 KVDIAIYGHVH 501 (612)
Q Consensus 491 ~VdlvlsGH~H 501 (612)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-11 Score=128.57 Aligned_cols=259 Identities=13% Similarity=0.088 Sum_probs=124.9
Q ss_pred CCeEEEEEeecCCCCC--CCCCcccccccchHHHHHHHHHhc--CCccEEEEeCc-ccccCCchh--HHHHHHHhhhhhh
Q 007233 285 SLQRVVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGD-ICYANGYIS--QWDQFTAQIEPIA 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~--~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GD-i~Y~~g~~~--~wd~f~~~i~~l~ 357 (612)
..+||++++|+|.+.. .......+. ......++++++.. .++|+|+++|| ++ +.+... ..+.+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~-~~~~~~l~~lv~~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRR-EELKKALDKVVEEAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECH-HHHHHHHHHHHHHHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChh-HHHHHHHHHHHHHHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH
Confidence 3599999999997621 000000000 11123455554432 57999999999 65 444322 2344555555554
Q ss_pred cCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC-------CCC
Q 007233 358 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW-------REG 430 (612)
Q Consensus 358 s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-------~~~ 430 (612)
..+|+++++||||... . ..+... -...+ ..+.+-.+......+.++.+++.|++++..... ...
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~~~~~--l~~~g----~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~ 165 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KLFGNF--VTSIS----SDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDF 165 (336)
T ss_dssp HHSCEEECCC-------C--HHHHHH--HHHHC----SSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHH
T ss_pred hcCCEEEECCCCCccc-c--ccHHHH--HHhcC----CEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHH
Confidence 3389999999999753 1 000000 00000 001111110000011222356888888643221 112
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccc
Q 007233 431 TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIY 510 (612)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~ 510 (612)
.+|.+|+.+.|...-+....+.|+++|.|+ +..... ..+..... ..+...+.+.++|++++||.|..+...
T Consensus 166 ~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 166 RFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEeC---
Confidence 467889888886521023457999999998 532110 00000000 001112335689999999999987652
Q ss_pred cceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007233 511 QNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 590 (612)
Q Consensus 511 ~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 590 (612)
. .+..+..|+... ..+ +.. ....||..|++.++....++++.-.. +.+-++.+
T Consensus 237 ~----------------~~~i~y~GS~~~--~s~-------~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~~~~ 289 (336)
T 2q8u_A 237 K----------------QPLTIYPGSLIR--IDF-------GEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKTLYY 289 (336)
T ss_dssp E----------------TTEEEECCCSSC--CSG-------GGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEEEEE
T ss_pred C----------------CccEEECCCCcC--CCc-------ccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEEeec
Confidence 0 112223443211 111 110 12468999998544457888886444 65656555
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.9e-10 Score=108.56 Aligned_cols=181 Identities=16% Similarity=0.234 Sum_probs=109.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
-+||+++||+|.+.... ...+.+.+++++ .++|+|+++||++. ...++.++.+ ..|++.+
T Consensus 10 mm~i~~iSD~H~~~~~~---------~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v 69 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCN---------SLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIV 69 (192)
T ss_dssp -CEEEEECCCCBTTTCS---------SCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEEC
T ss_pred ceEEEEEecCCCCccch---------hHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEE
Confidence 37999999999753210 011233333332 56999999999983 2233344433 3589999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||... .+|. ...++.
T Consensus 70 ~GNhD~~~------------------------~lp~------~~~~~~-------------------------------- 87 (192)
T 1z2w_A 70 RGDFDENL------------------------NYPE------QKVVTV-------------------------------- 87 (192)
T ss_dssp CCTTCCCT------------------------TSCS------EEEEEE--------------------------------
T ss_pred cCCcCccc------------------------cCCc------ceEEEE--------------------------------
Confidence 99999741 0110 011111
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
..+.|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 88 ---~~~~i~l~Hg~~-~~~--~----~------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 133 (192)
T 1z2w_A 88 ---GQFKIGLIHGHQ-VIP--W----G------DMASLALLQRQFDVDILISGHTHKFEAFE------------------ 133 (192)
T ss_dssp ---TTEEEEEECSCC-CCB--T----T------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------
T ss_pred ---CCEEEEEECCCc-CCC--C----C------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------
Confidence 125788888554 322 1 0 14567778888899999999999854321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 592 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 592 (612)
.+++.++..|+.+....+.. .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 134 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 134 HENKFYINPGSATGAYNALE---------TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp ETTEEEEECCCTTCCCCSSC---------SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ECCEEEEECCcccccCCCCC---------cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 14677777887665321110 123468999998 6678888888644454 466666655
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-10 Score=108.79 Aligned_cols=165 Identities=18% Similarity=0.216 Sum_probs=106.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC-CccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999942 123455555433 79999999998421 2333332 99999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
.||||... .+|. ...+..
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~~-------------------------------- 75 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTEL-------------------------------- 75 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEEE--------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEEE--------------------------------
Confidence 99999631 0110 000100
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
..+.|++.|.|+ +... . ..+.+.+++++++++++++||+|......
T Consensus 76 ---~~~~i~~~Hg~~-~~~~------~------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 76 ---GSTKIIQTHGHL-FDIN------F------NFQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp ---TTEEEEEECSGG-GTTT------T------CSHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred ---CCeEEEEECCCc-cCCC------C------CHHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 124788899887 5321 0 13467778888999999999999865321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 590 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 590 (612)
.+++.++..|+.|..... ....+|..+++ ++..+.++++ ..+|+++.+++.
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 146777888877653210 11358999998 6678999987 567887775443
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4.5e-11 Score=119.68 Aligned_cols=214 Identities=9% Similarity=0.001 Sum_probs=109.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHH---HhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI---QDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.||+++||+|... ......++.+. +...++|+|+++||++...... .+..+.+..+....|++
T Consensus 2 m~i~~isD~H~~~-----------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~---~~~~~~l~~l~~~~~~~ 67 (252)
T 1nnw_A 2 VYVAVLANIAGNL-----------PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVK 67 (252)
T ss_dssp CEEEEEECCTTCH-----------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEE
T ss_pred cEEEEEeecCCCH-----------HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCH---HHHHHHHHhhHhhcCee
Confidence 5899999999531 01112222222 2101799999999999543222 23334444443336899
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKFIEHC 440 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~WL~~~ 440 (612)
+++||||........ .++ .+.... . +++.... ... ..| ....+|.+||++.
T Consensus 68 ~v~GNhD~~~~~~~~---------~~~-~~~~~~--~----------~~~~~~~---~~~-~~~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 68 IIRGKYDQIIAMSDP---------HAT-DPGYID--K----------LELPGHV---KKA-LKFTWEKLGHEGREYLRDL 121 (252)
T ss_dssp EECCHHHHHHHHSCT---------TCS-SSGGGG--G----------SSCCHHH---HHH-HHHHHHHHHHHHHHHHHTS
T ss_pred EEecchHHHhhcccc---------ccC-Cccccc--c----------hhhhHHH---HHH-HHHHHHHCCHHHHHHHHhC
Confidence 999999974211000 000 000000 0 0000000 000 000 1135788898763
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCCC
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEK 519 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~ 519 (612)
.......-....|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 122 p~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~------------ 183 (252)
T 1nnw_A 122 PIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM------------ 183 (252)
T ss_dssp CSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE------------
T ss_pred CceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe------------
Confidence 33221111224677888876 33211000 1 111146788888888 99999999999855331
Q ss_pred ccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 520 NYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 520 ~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
.+++++|..|+.|...+. +...+|..+++ ++..+.+..+
T Consensus 184 ------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 146778888887754210 12357888876 4445554443
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-10 Score=113.15 Aligned_cols=190 Identities=20% Similarity=0.279 Sum_probs=111.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+||++++|+|.+.... . . .+.+.++++ ..++|+|+++||++. .+.++.++.+ ..|++.+
T Consensus 25 ~m~i~~iSD~H~~~~~~--~---l----~~~l~~~~~-~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK--E---L----PSNFRELLA-TDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS--S---C----CGGGHHHHH-CTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH--H---H----HHHHHHHHh-cCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 47999999999753210 0 1 123444444 267999999999993 2334444443 3689999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||..... +. ..+. ..+|. .. ..
T Consensus 85 ~GNHD~~~~~----~~---------~~~~--~~lp~------~~---------------------------------~~- 109 (215)
T 2a22_A 85 SGDLDSAIFN----PD---------PESN--GVFPE------YV---------------------------------VV- 109 (215)
T ss_dssp CCTTCCSCCB----CC---------GGGT--BCCCS------EE---------------------------------EE-
T ss_pred cCCCcCcccc----cC---------hhhH--hhCCc------eE---------------------------------EE-
Confidence 9999975211 00 0000 00000 00 00
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
....+.|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 110 -~~~~~~i~l~Hg~~-~~~--~----~------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~------------------ 157 (215)
T 2a22_A 110 -QIGEFKIGLMHGNQ-VLP--W----D------DPGSLEQWQRRLDCDILVTGHTHKLRVFE------------------ 157 (215)
T ss_dssp -EETTEEEEEECSTT-SSS--T----T------CHHHHHHHHHHHTCSEEEECSSCCCEEEE------------------
T ss_pred -ecCCeEEEEEcCCc-cCC--C----C------CHHHHHHHHhhcCCCEEEECCcCCCccEe------------------
Confidence 01234788888654 321 1 0 14567778888899999999999854321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 592 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 592 (612)
.+++.++..|+.+....+.. .....+|..+++ ++..+.++++.-.+|+ .+.+..+.|
T Consensus 158 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 KNGKLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ETTEEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred eCCEEEEECCcccccCCCCC---------CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 14677777887665321100 123468999998 6678888888655555 355555443
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-10 Score=116.73 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=111.2
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
...+||++++|+|..... + +..++|+||++||+++ .|...+.+.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~~---------------l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---------------I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---------------C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcch---------------h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 345899999999975310 1 2367999999999995 455555666666666542 34689
Q ss_pred EcCCCCccCCCCCCCCCCCC--CCCCcc----ccc---cceeeecCCCC--CCceEEEEEeCCEEEEEEeCCCCCCC---
Q 007233 364 IASGNHERDWPGTGSFYGNK--DSGGEC----GVL---AETMFYVPAEN--RAKFWYSTDYGMFRFCVADTEHDWRE--- 429 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~--dsgge~----g~~---~~~~f~~P~~~--~~~~~Ysfd~G~v~fi~Ldt~~~~~~--- 429 (612)
+++||||+.... .++... ...... ..+ +...-.++.+. ..+ -+..+++++|++..-...+..
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f 190 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGF 190 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCC
Confidence 999999985311 111000 000000 000 00000001000 001 135678899988543221111
Q ss_pred CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHH-HhcCCeEEEecCcccceeecc
Q 007233 430 GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW-QKYKVDIAIYGHVHNYERTCP 508 (612)
Q Consensus 430 ~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~-~k~~VdlvlsGH~H~YeR~~p 508 (612)
..++.+++.+..... .....|++.|.|+ |......... ....+.+.|.+++ ++++++++++||+|......
T Consensus 191 ~~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~- 262 (296)
T 3rl5_A 191 NLPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM- 262 (296)
T ss_dssp BCCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-
T ss_pred CcchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-
Confidence 112222443333333 1234689999998 6653221000 1122345777777 68999999999999743221
Q ss_pred cccceeccCCCccccCCCCceEEEEeCCCCCCC
Q 007233 509 IYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL 541 (612)
Q Consensus 509 ~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l 541 (612)
..+++++|-.|+.|...
T Consensus 263 ----------------~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 263 ----------------TDGYTTYINASTCTVSF 279 (296)
T ss_dssp ----------------ECSSCEEEECBCSCTTS
T ss_pred ----------------EECCEEEEECCcCCcCc
Confidence 01467778888777654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=116.80 Aligned_cols=202 Identities=14% Similarity=0.230 Sum_probs=101.0
Q ss_pred eEEEEEeecCCCCCCCCCccc-ccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYN-DFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~-~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s~vP 361 (612)
+||++++|+|.+.......+. .........++++++. ..+||+||++||++++.+. ...++.+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 589999999987531000000 0001122344554432 2589999999999944322 3344555566665544499
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEE--eC-CEEEEEEeCCCCCC----CCHHHH
Q 007233 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTD--YG-MFRFCVADTEHDWR----EGTEQY 434 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd--~G-~v~fi~Ldt~~~~~----~~~~Q~ 434 (612)
+++++||||.... ..+.... .. .+-...+ +. .... +.+. .| .+.|+.+.-..... .+.++.
T Consensus 81 v~~i~GNHD~~~~---~~~~~~~--~~--~~~~~~~-~~--~~~~--v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~ 148 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFGNFV--TS--ISSDITF-VM--SFEP--VDVEAKRGQKVRILPFPYPDESEALRKNEGDFR 148 (379)
T ss_dssp EEECCCTTSCTTH---HHHHHHH--HT--TCSSEEE-CC--SSCC--EEEECTTCCEEEEEEECCCCCC----CHHHHHH
T ss_pred EEEEcCCCccccC---ccccccc--cc--cCCccee-ec--ccce--EEEEcCCCCEEEEEECCCCCHHHHhhhhccchH
Confidence 9999999995310 0000000 00 0000000 00 0011 2222 23 46777775322111 135678
Q ss_pred HHHHHHHhhcc---CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 435 KFIEHCLASVD---RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 435 ~WL~~~La~~~---r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+|+.+.|+..- .....+.|+++|.++ .........+.... ..+...+...++|+++.||.|..+..
T Consensus 149 ~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 149 FFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 99999887211 124456899999987 32211001110000 01111222468999999999998654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=3.4e-09 Score=113.24 Aligned_cols=186 Identities=15% Similarity=0.056 Sum_probs=96.6
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhhhhc
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l~s 358 (612)
...+||++++|+|.+... +.. ........++++++. ..++|+||++||++..... ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 345899999999987421 100 001112345555543 2689999999999854322 2344556666766654
Q ss_pred -CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHH
Q 007233 359 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFI 437 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL 437 (612)
.+|+++++||||.......... .+ .+...+..-.+ ..++..+-+++.|++++...... ..+..+||
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~~------~~---~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l 160 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEESP------LA---LLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKL 160 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCCG------GG---GGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccccCH------HH---HHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHH
Confidence 5899999999997532110000 00 00000111000 11221122458888888654321 12223343
Q ss_pred ---HHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 438 ---EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 438 ---~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
...+. ...+.|++.|.|+ .... .+...... .. + .++|++++||+|..++
T Consensus 161 ~~l~~~~~-----~~~~~Ill~H~~~-~~~~-----~~~~~~~~--~~----l--~~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 161 KNFESEAK-----NYKKKILMLHQGI-NPYI-----PLDYELEH--FD----L--PKFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHHHHHH-----TCSSEEEEECCCC-TTTS-----SSSCSSCG--GG----S--CCCSEEEECSCCSCEE
T ss_pred HHhhhhcc-----cCCCEEEEECcCc-cccC-----CCCcccCH--HH----h--hhCCeEEccCCCCCcc
Confidence 33222 2335899999987 3211 01110111 11 1 1399999999998743
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=2.3e-09 Score=107.25 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=110.7
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+|++++||+|.+ ...+++++++..++|.++++||++...... .+..+.+..+. +++.+
T Consensus 3 ~mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~---~~~~~~l~~~~---~~~~v 61 (246)
T 3rqz_A 3 AMRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGYGPRP---RECVELVRVLA---PNISV 61 (246)
T ss_dssp CCCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSSSSCH---HHHHHHHHHHC---SSEEC
T ss_pred CcEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCCCCCH---HHHHHHHHhcC---CCEEE
Confidence 3789999999943 234566666655899999999999543222 23334443331 36899
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
.||||...... +... .+. +.......|. ......++.+||++......
T Consensus 62 ~GNhD~~~~~~---~~~~------------~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~ 109 (246)
T 3rqz_A 62 IGNHDWACIGR---LSLD------------EFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMI 109 (246)
T ss_dssp CCHHHHHHTCC---CCCC--------------C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEE
T ss_pred eCchHHHHhcc---CCcc------------ccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEE
Confidence 99999752110 0000 000 0000000000 00124688999986443322
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce-eecccccceec--cC--CCc
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE-RTCPIYQNICT--NK--EKN 520 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye-R~~p~~~~~~~--~~--~~~ 520 (612)
. . .+++.|.++ .+... ... .. ...+.++|++++++++|+||+|.-. +...- +..+. .. ...
T Consensus 110 ~--~--~i~~~Hg~p-~~~~~-----~~~-~~--~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~-~~~~~~~~~~~~~~ 175 (246)
T 3rqz_A 110 D--G--DWTVVHGSP-RHPIW-----EYI-YN--ARIAALNFPAFDTPLCFVGHTHVPLYIREDE-ALSNVAPHHPNDGE 175 (246)
T ss_dssp E--T--TEEEESSCS-SSTTT-----CCC-CS--HHHHHHHGGGCCSSEEECCSSSSEEEEEHHH-HHTTCCCBCCCTTC
T ss_pred E--C--CEEEEECCc-CCccc-----ccc-CC--hHHHHHHHhccCCCEEEECCcCcccEEEecc-cccccccccccccc
Confidence 1 1 467788776 43210 111 11 4577888999999999999999732 32100 00000 00 000
Q ss_pred cccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 521 YYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 521 ~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
.+. -..+...|..|+-|.+.+. +..-+|+.++. +...+++..+
T Consensus 176 ~~~-l~~g~~ivNpGSVG~Prdg------------~p~A~Y~i~d~-~~~~v~~~rv 218 (246)
T 3rqz_A 176 VLD-VSSGRYIINPGAVGQPRDG------------DPRASYAIFEP-DAQRVTFHRV 218 (246)
T ss_dssp EEE-CSSSCEEEEECCSSCCCSS------------CCSEEEEEEEG-GGTEEEEEEE
T ss_pred eee-cCCCeEEEECCccCCCCCc------------CCcceEEEEEC-CCCEEEEEEe
Confidence 000 0134677788888875311 12346888886 4455555443
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-09 Score=108.47 Aligned_cols=216 Identities=15% Similarity=0.156 Sum_probs=113.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
..|++++||+|.+. ..+++++++. .++|.|+++||++...... .+..+.++.+ -|++
T Consensus 11 ~~~i~~iSDiHg~~---------------~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGNT---------------TALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTCH---------------HHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCCH---------------HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEE
Confidence 48999999999531 2233333322 4799999999999543221 3444444443 3789
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
.+.||||...... . . +.++.. .|. ..+.+ .. +. ...-....+|.+||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~---~--~~~~~~------~~~----~~~~~----~~----~~-~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---V---R--KELDST------RPS----QRYLL----RQ----CQ-YVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---H---T--TCSCTT------SHH----HHHHH----HH----HH-HHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---h---c--cccCCC------cHH----HHHHH----HH----HH-HHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 0 0 000000 000 00000 00 00 00012346888998864332
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcccc
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 523 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~ 523 (612)
....-....|++.|..+ .+.....- ..... .+.+..++.+.++|++|+||+|.-....
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~~~~~~----~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKNWGREL----IHTGK-QEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBSSSSTT----STTCC-HHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCCCCcee----cCCCc-HHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111234677788654 32210000 00111 4578888888899999999999633221
Q ss_pred CCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 524 GTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
..++..+|..|+.|.+...-+ ... .+....|+.+++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~~----~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QLR----KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TGG----GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--ccc----CCCCCEEEEEEecCCCceEEEEEE
Confidence 014678899999887542211 000 012357899998433335677664
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.6e-08 Score=95.77 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||+++||+|.. ...++++++.. .++|+|+++||++.. +.++.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999932 12233333322 689999999999842 234444433 579999
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-08 Score=96.78 Aligned_cols=149 Identities=18% Similarity=0.212 Sum_probs=82.9
Q ss_pred eEEEEEeecCCCCCCCC--CcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGS--NEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
+|+++++|+|.+..... ..+..+. ...+.+.+.+++ ..++|+|+++||+++.. .+++...+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFK-GFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCT-THHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHH-HHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCEE
Confidence 57999999997642100 0011111 112223233332 25799999999999643 2223344444443 24899
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
.++||||.... . +... |-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~---~--------------~~~~-----------~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE---S--------------LKEY-----------FDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH---H--------------HTTT-----------CSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh---h--------------hhhh-----------hhc----------hh----------HHHHHH----h
Confidence 99999997410 0 0000 100 00 111221 1
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
. ..+.|++.|.|+ +..... .+ ....+.+.+++.+++++++|+||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 135799999987 543211 11 12367888999999999999999998654
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.1e-07 Score=90.57 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=41.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
+|++++||+|.... ...+ .+.++++. .++|+|+++||++.. +..+.++.+ ..|++.++
T Consensus 23 mri~~iSD~Hg~~~-----~~~l----~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----MASL----PDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----TCCC----CHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----HHHH----HHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0011 12233322 579999999999841 233344433 36999999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999963
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.4e-07 Score=95.62 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=52.4
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHhhhhhhc-CC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~--~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~s-~v 360 (612)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 589999999987421 1000 00112334444432 268999999999996432 22345566666766654 68
Q ss_pred CeEEcCCCCccC
Q 007233 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.64 E-value=4.1e-06 Score=89.77 Aligned_cols=258 Identities=13% Similarity=0.111 Sum_probs=122.7
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhh-----
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..++|+|+++||++..... ......+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421111 111123344444443 2689999999999855432 1222334444332
Q ss_pred -------h----------------------hcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCc
Q 007233 356 -------I----------------------ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAK 406 (612)
Q Consensus 356 -------l----------------------~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~ 406 (612)
+ ...+|++++.||||..... .+....+.-.+.+. -..|.-. ...++
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~--~~~s~~~lL~~~g~--v~l~g~~-~~~~~ 162 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD--GRYSALDILQVTGL--VNYFGRV-PENDN 162 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-------CCCHHHHHHHTTS--CEECCCC-C---C
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc--ccccHHHHhccCCe--EEEeCCc-ccCCc
Confidence 2 1379999999999974211 10000000000000 0011000 00000
Q ss_pred e---EEEEEeCC--EEEEEEeCCCCCCCCHHH-HHHHHHHHhhc-cC---CCCCEEEEEEecccccCCCccccCCCCCCc
Q 007233 407 F---WYSTDYGM--FRFCVADTEHDWREGTEQ-YKFIEHCLASV-DR---QKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 476 (612)
Q Consensus 407 ~---~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q-~~WL~~~La~~-~r---~~~pwvIv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
. -..+.-|. +.+.++.-.. .+. .+++++..... .. ....+.|++.|... ... +. ..+..
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~-~~~----~~-~~yip 231 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH-SAH----TP-TSYLP 231 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCS-SCS----SS-SSSCC
T ss_pred eeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCc-cCC----CC-cccCc
Confidence 0 01234444 5555564221 121 13333222211 11 23457899999876 221 11 11111
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeee
Q 007233 477 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRD 556 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~ 556 (612)
+ -+...++|+++.||.|..+...-. + ..+++..+-.|+.... .+. .-..
T Consensus 232 ----~----~l~~~~~DyvalGH~H~~~~~~~~-~-------------~~~g~~i~~PGS~~~~--s~~-------e~E~ 280 (417)
T 4fbw_A 232 ----E----SFIQDFYDFVLWGHEHECLIDGSY-N-------------PTQKFTVVQPGSTIAT--SLS-------PGET 280 (417)
T ss_dssp ----G----GGSCTTCSEEEEESCCSCEEEEEE-E-------------TTTTEEEEECCCSSCS--SCC-------HHHH
T ss_pred ----h----hHhhcCCCEEEecCccccceeccc-c-------------CCCCEEEEECCCCCcC--CCc-------cccC
Confidence 1 133568999999999997654200 0 0134444445543221 111 0001
Q ss_pred CceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEe
Q 007233 557 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISR 592 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k 592 (612)
...||..|++ ++..+.++++.-..=. +..++.+..
T Consensus 281 ~~kg~~lvei-~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 281 APKHCGILNI-TGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp SCCEEEEEEE-ETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEEEEE-ECCEEEEEEEECCCcccEEEEEEEeec
Confidence 3568999998 5677889988633322 455555544
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=99.47 Aligned_cols=87 Identities=11% Similarity=0.174 Sum_probs=54.7
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhhh---
Q 007233 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 356 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l--- 356 (612)
....+||++++|+|.+....... ........++++++. ..+||+||++||++..... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999875421110 011122344444432 2689999999999955432 23344555555432
Q ss_pred -------------------------------hcCCCeEEcCCCCccC
Q 007233 357 -------------------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -------------------------------~s~vP~~~v~GNHD~~ 372 (612)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-06 Score=94.02 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=52.7
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc-hhHHHHHHHhhhh-----
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++.+ .+||+||++||++..... ......+++.+..
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421110 0111233444444432 689999999999955432 2222334444332
Q ss_pred -------h----------------------hcCCCeEEcCCCCccC
Q 007233 356 -------I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -------l----------------------~s~vP~~~v~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999974
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.11 E-value=7.7e-06 Score=90.51 Aligned_cols=200 Identities=15% Similarity=0.106 Sum_probs=90.4
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchH-HHHHHHHHhc--CCc-cEEEEeCcccccCCch--hHHHHHHHhhhhhhcC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~-~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~s~ 359 (612)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||++...... ...+...+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 000111111 2233333321 135 7999999998432110 1112333334333 2
Q ss_pred CCeEEcCCCCccCCCCCCCCCCCCCCCCccccccc--eeeecCCC-CCCceEEEEEeCC--EEEEEEeCCCC--CC-C--
Q 007233 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE--TMFYVPAE-NRAKFWYSTDYGM--FRFCVADTEHD--WR-E-- 429 (612)
Q Consensus 360 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~--~~f~~P~~-~~~~~~Ysfd~G~--v~fi~Ldt~~~--~~-~-- 429 (612)
. -+.++||||+++... .+... -.+.+.++. +.+.-... ...+.|..++.++ +-|+.+.+... +. +
T Consensus 84 ~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 Y-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp C-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred C-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 3 367899999964210 00000 000001100 00000000 0012355677887 55666765431 11 1
Q ss_pred --------CHH-HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCc
Q 007233 430 --------GTE-QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHV 500 (612)
Q Consensus 430 --------~~~-Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~ 500 (612)
..+ -.+|+++ |++. .+...+|++.|.|. ..... .+.. ... ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~----~~~~-~~~-~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE----HGSN-APG-DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC----CTTS-CCC-HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc----cccc-Cch-HHHHHHhCCCCceeEEECCCC
Confidence 012 2234433 4321 24567999999997 32211 1100 011 223443344456999999999
Q ss_pred ccce
Q 007233 501 HNYE 504 (612)
Q Consensus 501 H~Ye 504 (612)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.9e-05 Score=88.16 Aligned_cols=189 Identities=14% Similarity=0.052 Sum_probs=89.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc--cc--cchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchh--HHHHHHHhhhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND--FQ--YASLNTTRQLIQDL--KNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 355 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~--~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~--~wd~f~~~i~~ 355 (612)
..++|++++|+|...... .|.. .. .+....+..++++. .++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 359999999999642110 0000 00 01122333333321 3577 8999999995432111 11222233332
Q ss_pred hhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccce--eee--cCC-CCCCceEEEEEeCC--EEEEEEeCCCC--
Q 007233 356 IASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAET--MFY--VPA-ENRAKFWYSTDYGM--FRFCVADTEHD-- 426 (612)
Q Consensus 356 l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~--~f~--~P~-~~~~~~~Ysfd~G~--v~fi~Ldt~~~-- 426 (612)
+ . +-+.++||||+++... .+.... .+.+.++.. ... -|. ....+.|..++.++ +-|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~-~l~~~l---~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~ 178 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPG-PLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 178 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHH-HHHHHH---TTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred c--C-CCccccccccccCCHH-HHHHHH---hhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhh
Confidence 2 2 3367899999974210 000000 001111100 000 000 00123456678887 55666665421
Q ss_pred ---------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007233 427 ---------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 427 ---------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
+....++.+...+.|++ .+...+|++.|.|. . .+ ..+.++ .+||++|
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~-----------------~d--~~la~~~~gvDlIl 235 (552)
T 2z1a_A 179 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-G-----------------ED--LKLARRLVGVQVIV 235 (552)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-H-----------------HH--HHHHTTCSSCCEEE
T ss_pred ccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-c-----------------hH--HHHHHhCCCccEEE
Confidence 01112333333344543 34556999999886 1 00 112233 5899999
Q ss_pred ecCccccee
Q 007233 497 YGHVHNYER 505 (612)
Q Consensus 497 sGH~H~YeR 505 (612)
+||.|...-
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998654
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00019 Score=79.43 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=90.4
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhH--------HHHHH
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQ--------WDQFT 350 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~--------wd~f~ 350 (612)
..++|+.++|+|..-... .|.. -..+.+..+..++++. .+++ +++.+||++.... ... .....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 359999999999643210 0100 0111233344444331 3455 7788999995331 111 11222
Q ss_pred HhhhhhhcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCCCCCceEEEEEeCCE--EEEEEeCC
Q 007233 351 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAENRAKFWYSTDYGMF--RFCVADTE 424 (612)
Q Consensus 351 ~~i~~l~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~~~~~~Ysfd~G~v--~fi~Ldt~ 424 (612)
+.+..+ ... +.++||||+++.... .++. ++..|+. +..........+.|.-++.+++ -||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 222222 333 567999998742100 0000 0000000 0000000000123566778874 55666654
Q ss_pred CC--CCC--------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007233 425 HD--WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 425 ~~--~~~--------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
.. +.. -....+.+++.+++.. .+...+|++.|.+...........+....+.. ..+|..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 21 111 0123344444444432 34567999999875221100000000001111 11232222 258999
Q ss_pred EEecCcccce
Q 007233 495 AIYGHVHNYE 504 (612)
Q Consensus 495 vlsGH~H~Ye 504 (612)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999854
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00011 Score=82.43 Aligned_cols=192 Identities=15% Similarity=0.111 Sum_probs=88.3
Q ss_pred CCCeEEEEEeecCCCCCCCCCccc------ccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCch--hHHHHHHHh
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYN------DFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 352 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~------~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~--~~wd~f~~~ 352 (612)
.-.++|+.++|+|..-......|. .-..+.+..+..++++. .+++ +++..||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 00011133333333321 2344 899999999543211 111222233
Q ss_pred hhhhhcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCC---CCCceEEEEEeCCE--EEEEEeC
Q 007233 353 IEPIASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAE---NRAKFWYSTDYGMF--RFCVADT 423 (612)
Q Consensus 353 i~~l~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~---~~~~~~Ysfd~G~v--~fi~Ldt 423 (612)
+..+ ... ++++||||+++.... .++. +++.|+. +...-... ..-+.|.-++.+++ -||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 233 467999998742100 0000 0011110 00000000 01123556778874 4566644
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007233 424 -EH-----DWREG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 424 -~~-----~~~~~---~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vd 493 (612)
.. ....+ .+..+-+++.+++........+|++.|.+. .. ... +.++ .+||
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~--~~---------------d~~---la~~~~giD 220 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS--EK---------------NIE---IAQKVNDID 220 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH--HH---------------HHH---HHHHCSSCC
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc--hh---------------hHH---HHHhCCCCC
Confidence 10 00000 122344555554443234567999999775 00 112 2222 4799
Q ss_pred EEEecCcccce
Q 007233 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|.||.|...
T Consensus 221 lIlgGHtH~~~ 231 (579)
T 3ztv_A 221 VIVTGDSHYLY 231 (579)
T ss_dssp EEEECSSCCEE
T ss_pred EEEeCCCCccc
Confidence 99999999866
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00029 Score=70.22 Aligned_cols=170 Identities=15% Similarity=0.194 Sum_probs=85.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCccccc-CCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~-~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||.=.. ++ ...++.++++. +. |+++..|..+.. .+.. +...+.+..+ .+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE
Confidence 479999998321 12 22333333321 33 888887777633 3332 2222223222 45555
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVAD--TEHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld--t~~~~~~~~~Q~~WL~~~L 441 (612)
+.||||++..+.-.+.+... . -.--++|....++.|.-++.++.++-+++ .......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~----~----vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP----V----VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS----E----ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC----c----eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 67999998531111110000 0 00012232223456777888886665554 3322111122233456666
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
++.. .+.+|+.+|.-. ++ + .+.+. .+...+||+++.||+|...
T Consensus 133 ~~lk---~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 133 EEEK---ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HHCC---CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSCB
T ss_pred HHhC---CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcCC
Confidence 6652 677999999431 11 1 11222 2234579999999999843
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.8e-05 Score=84.69 Aligned_cols=191 Identities=11% Similarity=0.068 Sum_probs=89.8
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc------cccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchh--HHHHHHHhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND------FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~------~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~--~wd~f~~~i 353 (612)
..++|+.++|+|..-... ..+.. -..+.+..+..++++. .++ ++++.+||++....... ......+.+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~-~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQT-SEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCB-CTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCccc-ccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 459999999999643210 00000 0011123333333321 234 69999999995432211 112233333
Q ss_pred hhhhcCCCeEEcCCCCccCCCCC--C-CCCCCCCCCCccccccc--eeee----cCC-CCCCceEEEEEeCCEE--EEEE
Q 007233 354 EPIASTVPYMIASGNHERDWPGT--G-SFYGNKDSGGECGVLAE--TMFY----VPA-ENRAKFWYSTDYGMFR--FCVA 421 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~--~-~~y~~~dsgge~g~~~~--~~f~----~P~-~~~~~~~Ysfd~G~v~--fi~L 421 (612)
..+ .+. +.++||||+++... . .++. +++.++. +... -|. ....+.|.-++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 332 334 56799999974210 0 1111 1111110 0000 000 0012345667888855 5565
Q ss_pred eCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCe
Q 007233 422 DTEHD--W-REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD 493 (612)
Q Consensus 422 dt~~~--~-~~~-----~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vd 493 (612)
.+... + .++ .+..+.+++.+++.+......+|++.|.+.. . ...+...+ .+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~--~---------------d~~la~~~--~giD 234 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFE--M---------------DKLIAQKV--RGVD 234 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHH--H---------------HHHHHHHS--TTCC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCcc--c---------------hHHHHHhC--CCCc
Confidence 54321 0 010 1233444544444322345679999998750 0 11222211 4799
Q ss_pred EEEecCcccce
Q 007233 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 235 lIlgGHtH~~~ 245 (546)
T 4h2g_A 235 VVVGGHSNTFL 245 (546)
T ss_dssp EEECCSSCCCC
T ss_pred EEEeCCcCccc
Confidence 99999999854
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00014 Score=80.26 Aligned_cols=203 Identities=14% Similarity=0.099 Sum_probs=89.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCccEEEE-eCcccccCCchh---HHHHHHHhhhhh
Q 007233 286 LQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYIS---QWDQFTAQIEPI 356 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~---~~~~~~~~~~~i~~~~--~~pDfvl~-~GDi~Y~~g~~~---~wd~f~~~i~~l 356 (612)
.++|+.++|+|..-......|.. -..+....+..++++. .+++.+++ +||++... ... ..+...+.+..
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~- 83 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNT- 83 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTT-
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHh-
Confidence 48999999999543211100100 0011233334443321 35676655 99999532 111 11222222222
Q ss_pred hcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCCC-C-CceEEEEEeCCE--EEEEEeCCC---
Q 007233 357 ASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAEN-R-AKFWYSTDYGMF--RFCVADTEH--- 425 (612)
Q Consensus 357 ~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~-~-~~~~Ysfd~G~v--~fi~Ldt~~--- 425 (612)
--+-++++||||+++.... .++. +++.|+- +.+.-.... . .+.|.-++.+++ -||.+-+..
T Consensus 84 --lg~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~ 155 (509)
T 3ive_A 84 --MPFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFN 155 (509)
T ss_dssp --SCCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHH
T ss_pred --cCCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccc
Confidence 1234567899998752100 0000 0001110 000000000 0 233556788884 456664321
Q ss_pred --CCC---C---CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007233 426 --DWR---E---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 426 --~~~---~---~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
.+. . -.+..+.+++.+++.+ .+...+|++.|.++.+..... ......... ..-..+.++ .+||++|
T Consensus 156 ~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~--~~d~~la~~~~giDlIl 230 (509)
T 3ive_A 156 DTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM--GGTDVRRAL--DKDIQTASQVKGLDILI 230 (509)
T ss_dssp HHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC-----CCCCCC--HHHHHHHHHCSSCCEEE
T ss_pred cccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccc--ccccccccc--chHHHHHhcCCCCcEEE
Confidence 010 0 1233445555555543 236778999998752222111 000000001 111233333 3799999
Q ss_pred ecCcccc
Q 007233 497 YGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
+||.|..
T Consensus 231 gGHtH~~ 237 (509)
T 3ive_A 231 TGHAHVG 237 (509)
T ss_dssp EESSCCC
T ss_pred eCCcCcc
Confidence 9999963
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00033 Score=78.16 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=25.7
Q ss_pred cc-EEEEeCcccccCCchhHH---HHHHHhhhhhhcCCCeEEcCCCCccCC
Q 007233 327 ID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 327 pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~s~vP~~~v~GNHD~~~ 373 (612)
+| +++.+||++.... ...+ +...+.+..+ ..+++ + ||||+++
T Consensus 123 pd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~ 168 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTL 168 (562)
T ss_dssp CCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGG
T ss_pred CCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhccc
Confidence 88 9999999995432 2222 2223333333 46665 6 9999864
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.62 E-value=8.1e-05 Score=72.22 Aligned_cols=82 Identities=9% Similarity=0.208 Sum_probs=44.8
Q ss_pred cccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc---
Q 007233 268 IWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--- 342 (612)
Q Consensus 268 ~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~--- 342 (612)
.|+....|.+.. -+|++++||+|... ..++++++.. .++|+|+++||+++....
T Consensus 13 ~~~~~~~~~~~~------mmki~~iSD~H~~~---------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~ 71 (208)
T 1su1_A 13 LGTENLYFQSNA------MMKLMFASDIHGSL---------------PATERVLELFAQSGAQWLVILGDVLNHGPRNAL 71 (208)
T ss_dssp ------------------CCEEEEECCCTTBH---------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCC
T ss_pred cCcccceecccc------cEEEEEEEcCCCCH---------------HHHHHHHHHHHhcCCCEEEECCCccccCccccc
Confidence 455555564322 27999999999531 2233333322 479999999999954221
Q ss_pred hhH--HHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007233 343 ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~--wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
..+ -.+..+.++.+ ..|++.++||||..
T Consensus 72 ~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 72 PEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred ccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 111 13445555443 25899999999974
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0013 Score=65.70 Aligned_cols=172 Identities=12% Similarity=0.062 Sum_probs=84.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||.= +. ++ ...++.++++. +. |+++..|+.+... +... ...+.+..+ .+-.+
T Consensus 1 m~ilf~GDv~-g~-----------~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da~ 61 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------PG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGCL 61 (255)
T ss_dssp CEEEEECCBB-HH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSEE
T ss_pred CEEEEEeccC-Ch-----------HH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCEE
Confidence 4799999983 11 11 23344444332 23 9999988888443 3321 222222221 44444
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecC-CCCCCceEEEEEeCCEEE--EEEeCCCCCCCCHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP-AENRAKFWYSTDYGMFRF--CVADTEHDWREGTEQYKFIEHC 440 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~~Ysfd~G~v~f--i~Ldt~~~~~~~~~Q~~WL~~~ 440 (612)
+.||||++......+.+.. . . .+. .--++| ....++.|.-++.++.++ +.|-+......-..-.+-+++.
T Consensus 62 -TlGNHefD~~~l~~~l~~~---~-~-~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 62 -TLGNHAWHHKDIYPMLSED---T-Y-PIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp -ECCTTTTSSTTHHHHHHTT---C-S-CEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred -EeccccccCchHHHHHhhC---C-C-cEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 5699999853111111000 0 0 000 001122 222345566788887554 5454442221122224446666
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+++. +...+|+.+|.-. ++ + .+.+.. ....+||+++.||+|...
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 6654 4667999999421 11 1 112222 224569999999999854
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0016 Score=65.93 Aligned_cols=172 Identities=13% Similarity=0.047 Sum_probs=87.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccch---HHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYAS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP 361 (612)
.+||+++||.+.. ++. ...++++.++ .++|+++..||.+... +.. ....+.+..+ .+-
T Consensus 4 ~m~ilf~GDv~G~------------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D 65 (281)
T 1t71_A 4 SIKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN 65 (281)
T ss_dssp CCEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC
T ss_pred eEEEEEECCcCCh------------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC
Confidence 3799999999732 121 1234444433 2589999999998543 332 2222222221 334
Q ss_pred eEEcCCCCccCCC-CCCCCCCCCCCCCccccccceeeecCCCC----CCceEEEEEeCCEE--EEEEeCCCCCCC--CHH
Q 007233 362 YMIASGNHERDWP-GTGSFYGNKDSGGECGVLAETMFYVPAEN----RAKFWYSTDYGMFR--FCVADTEHDWRE--GTE 432 (612)
Q Consensus 362 ~~~v~GNHD~~~~-~~~~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~~Ysfd~G~v~--fi~Ldt~~~~~~--~~~ 432 (612)
. .++||||++.. +.-.|.+ .. ..-.+ -++|... .+..|.-++.++++ +|.+-+...+.+ -..
T Consensus 66 a-~TlGNHefD~g~~~~~~l~---~~-~~v~~----aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~ 136 (281)
T 1t71_A 66 Y-ITMGNHTWFQKLDLAVVIN---KK-DLVRP----LNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTN 136 (281)
T ss_dssp E-EECCTTTTCCGGGHHHHTT---CT-TEECB----SCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCC
T ss_pred E-EEEccCcccCCccHHHHhh---hc-CEEee----ccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccC
Confidence 4 46799999854 1101111 00 00000 1112111 23456678888755 455544431221 122
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
-.+-+++.++ +.+...+|+.+|.-. ++ + .+.+.. .-..+||+++.||+|...
T Consensus 137 pf~~a~~~v~---~~~~diIIv~~H~g~--t~-----------E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 137 PFKVLKELIL---KRDCDLHIVDFHAET--TS-----------E---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHHT---TCCCSEEEEEEECSC--HH-----------H---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHHHh---hcCCCEEEEEeCCCc--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 2445555555 356788999999421 10 1 112222 223469999999999854
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0016 Score=55.65 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 167 NAPVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 167 ~~p~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
.+|..+++.... +.++++|+|......+ -..-.|+|......... .-..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID-DWIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT-TSEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc-ceEEEEE-----------------CCCceEE
Confidence 567666665543 4789999998764211 01244555543221100 0000110 1223457
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||+...|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998775556677899999999876543
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0019 Score=71.97 Aligned_cols=86 Identities=17% Similarity=0.110 Sum_probs=42.8
Q ss_pred CCCeEEEEEeecCCCCCCCCC--cccccccchHHHHHHHHHh---cCCcc-EEEEeCcccccCCchh----HHHHHHHhh
Q 007233 284 NSLQRVVIFGDMGKDEADGSN--EYNDFQYASLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQI 353 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~--~~~~~~~~~~~~~~~i~~~---~~~pD-fvl~~GDi~Y~~g~~~----~wd~f~~~i 353 (612)
...++|+.++|+|........ .|.. .-+.+..+...+++ ..+++ +++.+||++....... ..+...+.+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHH
Confidence 346999999999975321110 0100 01112223333332 25677 5799999994322111 111112222
Q ss_pred hhhhcCCCeEEcCCCCccCC
Q 007233 354 EPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~ 373 (612)
..+ .+- +.++||||+++
T Consensus 92 n~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 92 IKQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TTS--CCS-EECCCGGGSSS
T ss_pred Hhc--CCC-EEeecchhccc
Confidence 221 233 46889999974
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0026 Score=53.36 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=56.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCC-CccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+++... +.++++|+|....+..-..-.|+|...... .+.... .......+
T Consensus 8 P~~P~~~~~~~~-~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVTET-TATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEEEE-ETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEEec-cCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 456666655332 367999999976321122345666554332 111100 01112457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|++|+|++.|.|||......|...||+...++|.+.
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 899999999999999765556667888889998764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.014 Score=54.13 Aligned_cols=120 Identities=20% Similarity=0.162 Sum_probs=64.3
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007233 130 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (612)
++.|-+++. .|.|.+... +.+.|..+... ..|.+|..+++. ..+.++++|+|....+ ....-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~-----t~p~~P~~l~~~-~~~~~sv~l~W~~p~~-~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS-----TVVGSPKGISFS-DITENSATVSWTPPRS-RVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCSCEEEE-SCCSSCEEEEECCCSS-CCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEE-----CCCCCCCccEEE-EeCCCEEEEEEECCCC-cccEEEEEEEe
Confidence 344445554 577777662 23334332222 236677766654 2346899999986532 12334566765
Q ss_pred cCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCC
Q 007233 205 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPY 280 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~ 280 (612)
.++... ...+.. +.....+|+||+||+.|.++|...... +.|+ ...|+|.|.
T Consensus 132 ~~~~~~----~~~~~~-----------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTP----NVVTVD-----------------GSKTRTKLVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp TTCCCC----EEEEEE-----------------TTCCEEEECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred CCCCCc----eEEEcC-----------------CCcCEEEEcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 433111 011111 122456799999999999999874222 2233 456777763
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.008 Score=57.18 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCC---CCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceecc
Q 007233 165 NPNAPVYPRLAQGK---TWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWR 235 (612)
Q Consensus 165 ~~~~p~~~~La~~~---~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~ 235 (612)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 46678777776543 46899999987643210 12345555443322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcCC
Q 007233 236 DPGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKASP 279 (612)
Q Consensus 236 ~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~p 279 (612)
+-.....|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987654454 5688899999954
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00097 Score=56.72 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=58.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.++++|.|......+. ..-.|+|...+..... ..... +-...
T Consensus 10 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~ 67 (111)
T 1x5l_A 10 APSQVVVIRQER-AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 67 (111)
T ss_dssp CCCCCCCEECSC-BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCceEEEEE-cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCcee----EEEec-----------------CCCCE
Confidence 344555555432 347899999987532111 1234566544321110 00110 11235
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
.+|++|+|++.|.+||......|...||+...|+|++.++.
T Consensus 68 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 68 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 68999999999999998765556667899999999886543
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0049 Score=52.83 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=35.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..++|++|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 457899999999999999876556767789999999987544
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.018 Score=54.42 Aligned_cols=135 Identities=9% Similarity=0.059 Sum_probs=73.0
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeC---CCC---CcEE-EEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCC-
Q 007233 124 TGKGSLKLMLINQRS--DFSVALFSG---GLL---KPKL-VAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGI- 193 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~f~~---~~~---~~~~-~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~- 193 (612)
.+.....+.+-+.+. .|.|++... |.. .+.. +.......-..+.+|..+++. ..+.+++.|+|......
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~-~~~~~sv~l~W~~p~~~~ 143 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE-EYSETAVVLHWSLASDAD 143 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB-CCSSSCEEEEEECCTTCC
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE-EccCCeEEEEEeCCCccC
Confidence 345666777777775 588887664 221 1110 100100001122334443332 22468999999986310
Q ss_pred --CCCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007233 194 --NEAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWS 270 (612)
Q Consensus 194 --~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 270 (612)
.-..-.|+|...+. ..+. ..+.. .......+|+||+|++.|.|||......|...+|
T Consensus 144 ~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 203 (214)
T 2ibg_A 144 EHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASEFS 203 (214)
T ss_dssp GGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred CCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCc
Confidence 01123466654433 1111 01111 1112345789999999999999977656767788
Q ss_pred ceEEEEcCC
Q 007233 271 SEYQFKASP 279 (612)
Q Consensus 271 ~~~~F~T~p 279 (612)
+...++|..
T Consensus 204 ~~~~~~T~~ 212 (214)
T 2ibg_A 204 ALKQGRTQR 212 (214)
T ss_dssp CCEEEECCC
T ss_pred ceEeeEecC
Confidence 899999864
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0023 Score=56.26 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=57.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
|.+|..+++.- .+.+++.|+|......+. ..-.|+|...+..... .. ... ..
T Consensus 19 p~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~--~~--~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQAVA-LTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK--YK--SED-----------------TT 76 (123)
T ss_dssp SCCCEEEEEEE-EETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC--CC--CEE-----------------ES
T ss_pred CCCCcceEEEE-cCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc--EE--EEe-----------------CC
Confidence 45666666432 246899999986532110 0345777764321100 00 000 01
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 23578999999999999998764456678999999999875
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.002 Score=54.98 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++. ..+.+++.|+|.......-..-.|+|...+..... .... +-....+|
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~----~~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKAE-PESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEEE-CSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEE------------------CSSSEEEE
T ss_pred CCCCccCEee-eCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCce----EEec------------------CCCcEEEE
Confidence 4455555542 23478999999876431111233444433221110 0000 01135678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999987655666678999999998653
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.002 Score=54.84 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++......++++|+|....... -..-.|+|...+...+.. .+. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPRE-----VYQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEE-----EEE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEE-----EEe-----------------CCcE
Confidence 456677777643345689999996542111 112445555432222211 000 1123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
..++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999987655566678988999987653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.012 Score=55.73 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=56.2
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 168 APVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 168 ~p~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+++.... +.++++|+|......+ -..-.|+|...+...... -...+. ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 66667766554 3789999999754211 112345555433221100 000111 12234568
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+||+|++.|.++|......|.+.||+...|+|..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999876555666788888888754
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.017 Score=63.83 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=41.6
Q ss_pred eEEEEEeCCEE--EEEEeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCC
Q 007233 407 FWYSTDYGMFR--FCVADTEHD-----------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 473 (612)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~-----------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~ 473 (612)
.|.-++.++++ ||++-+... +...-+..+...+.|++ .+..-+|++.|-.+ .
T Consensus 135 py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~---------- 199 (530)
T 4h1s_A 135 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E---------- 199 (530)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H----------
T ss_pred ceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h----------
Confidence 46678888855 566655321 11112222333334443 34566999999653 0
Q ss_pred CCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 474 FAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 474 ~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+ ..+.++ -+||++|.||.|.+-
T Consensus 200 ------~d--~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 ------MD--KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ------HH--HHHHHHSTTCCEEECCSSCCCB
T ss_pred ------HH--HHHHhcCCCCCeeccCCcccee
Confidence 00 123333 379999999999753
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00077 Score=65.60 Aligned_cols=64 Identities=17% Similarity=0.286 Sum_probs=42.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||+|.. ...+.++++.. .++|.++++||++.. |... .+.++.+ . ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~-g~~~--~~~~~~l---~-~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVDR-GAEN--VECLELI---T-FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSSS-SSCH--HHHHGGG---G-STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccCC-CCCh--HHHHHHH---h-cCCEE
Confidence 689999999843 23345555543 368999999999953 3322 1222222 2 35899
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999974
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0059 Score=52.51 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCC-CCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGY-GIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~-~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|.|.... ..+ -..-.|+|...+...+. .... ..+-..
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 75 (120)
T 1x5f_A 17 LPSAPRDVVASL-VSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------VENT--------------SHPGEM 75 (120)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE------EEEC--------------SSTTCS
T ss_pred CCCCCCCcEEEe-cCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce------EEEe--------------ccCCcc
Confidence 345565555432 24689999998764 211 11245666654322111 0000 011234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.++|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 568999999999999998765556667888999999764
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0014 Score=55.56 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++|+||+|+|.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356799999999999999876555556788999999987
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0063 Score=51.46 Aligned_cols=91 Identities=20% Similarity=0.258 Sum_probs=57.4
Q ss_pred CCCCcceeeecC-CCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQG-KTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+++... .+.++++|+|......+. ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 556776665554 357899999997642110 113445544433222110 00 0 125
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|...||+...|+|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999876556666789999999964
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0026 Score=53.79 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=57.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.+++.|+|...... .+ .-.|+|...+..... .... .+-..
T Consensus 7 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~ 63 (108)
T 2djs_A 7 GPSTVPIMHQVS-ATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMA-----------------RSQTN 63 (108)
T ss_dssp CCCCCSCCEEEE-ECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEE-----------------EESSS
T ss_pred CCCCCcceEEEe-cCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEE-----------------ecCcc
Confidence 345666655532 2468999999876431 11 123444443321110 0000 01124
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
.++|+||+|++.|.+||......|...||+...|+|.+..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 5679999999999999987665666678999999998753
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0023 Score=54.36 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=56.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCC-CccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
|..|..+++.- .+.++++|+|........ ..-.|+|...+.. .+. ..+. +...
T Consensus 8 P~~P~~p~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~~-----------------~~~~ 64 (109)
T 1x5x_A 8 PSMPASPVLTK-AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK-----PKYD-----------------GEDL 64 (109)
T ss_dssp CCCCCCCEEEE-ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE-----EEEE-----------------ESCS
T ss_pred CcCCCCCEEEE-ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceE-----EeEe-----------------CCcc
Confidence 45666666432 346899999987643211 1234556543321 111 0111 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|+...++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 467899999999999999765556566788888998764
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0014 Score=54.75 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=31.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 34789999999999999876556666788888888876
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0017 Score=56.16 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=55.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.-....+++.|+|....... -..-.|+|..... ..+... + .+..
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~-----------------~~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----Y-----------------SGAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----E-----------------CSSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----E-----------------eccc
Confidence 345666666652334689999998654310 1123455554332 111100 0 0112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...||+...++|.+.
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 3457899999999999998765455556788778888754
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0016 Score=55.87 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=33.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..+++||+|++.|.|||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35789999999999999876555666788889999987653
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0026 Score=54.97 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=57.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
|.+|..+++.. .+.+++.|+|........ ..-.|+|....... ....+. .+.
T Consensus 9 p~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEEEE-EETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEEEE-ecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 34566666533 247899999986532110 02356676521110 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998765556678999999999765
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.016 Score=54.94 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=57.4
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++... .+.+++.|+|....... ...-.|+|...+...+..... .+ ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~------~~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP------ED------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG------GG------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc------cc------------ccCccc
Confidence 4667777776543 35789999998753210 012355565543222211000 00 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.+ .||+...|+|.+
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 56799999999999999976544543 366778888865
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.015 Score=60.50 Aligned_cols=49 Identities=27% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.....+|++.|-.+ ..+.. ....+.. ...|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~----~~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ----SSGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC----CTTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 34677999999765 22111 0001111 11232222 489999999999853
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0069 Score=51.44 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.+++.|+|......+ -..-.|+|...++..... . ..... .. ..+
T Consensus 8 P~~p~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~--~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRVTR-SSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS-V--RFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEEEE-EETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT-S--EEEEE---------------SS--SEE
T ss_pred CCCCCccEEEe-cCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce-e--EEEcc---------------CC--CEE
Confidence 44566666532 24689999998764211 012456665543111100 0 01000 11 267
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 89999999999999998755566678999999998754
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0088 Score=51.50 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=56.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.. .+.++++|+|.......-..-.|+|...+.... ....... .+....++|+|
T Consensus 21 ~P~~l~~~~-~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~--~~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGVKV-LSSSEISVHWEHVLEKIVESYQIRYWAAHDKEE--AANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEEEE-EETTEEEEECCCCSCTTCCEEEEEEEESSSCGG--GCEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEEEE-ccCCEEEEEecCCCCCccceEEEEEEECCCccc--CcEEEEc-----------------CCCEeEEEECC
Confidence 454555422 236899999987642011234566654332111 0000111 11224678999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999876555666789889999986543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0059 Score=52.14 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=56.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.++++|+|...... .-..-.|+|...+...+. ... ......
T Consensus 18 P~~P~~l~~~~-~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~----~~~-------------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAYA-ASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ----DVD-------------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEEE-EETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC----CEE-------------------ECSSEE
T ss_pred CcCCCccEEEe-cCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE----EEe-------------------cCCceE
Confidence 44566665532 2368999999875321 111345666554332210 000 012356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998765556667888889999764
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0066 Score=51.38 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=33.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
..+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4678999999999999997655566678999999998753
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0027 Score=64.40 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=42.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||+|.. ...+.++++.. .++|.++++||++.. |..+ .+.++.+..+ ..+++.
T Consensus 2 ~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdr-G~~s--~~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 2 ATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLVAR-GPGS--LDVLRYVKSL--GDSVRL 61 (280)
T ss_dssp CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCSSS-SSCH--HHHHHHHHHT--GGGEEE
T ss_pred eEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCC-CCcc--HHHHHHHHhC--CCceEE
Confidence 68999999843 23456666654 357999999999954 4322 1233333332 127999
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999964
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.01 Score=51.83 Aligned_cols=96 Identities=8% Similarity=0.013 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++... +.++++|+|......+ -..-.|+|...+..... ..... ..+....
T Consensus 27 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 86 (130)
T 1wfo_A 27 VPGPPMGILFPEV-RTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEV-----------------LAPSARQ 86 (130)
T ss_dssp CCCCCCCCEEEEE-CSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEE-----------------ECTTCCE
T ss_pred CCCCCCceEEEec-CCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEE-----------------eCCCceE
Confidence 3456666665432 4689999998754211 01234556543321100 00000 0123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.+|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 87 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 87 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 78899999999999999775556667888889999764
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.005 Score=53.68 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=47.8
Q ss_pred CCCCcEEEEEEeCCCCC-C-CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEE
Q 007233 178 KTWNEMTVTWTSGYGIN-E-AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~ 255 (612)
.+.++++|+|..+.+.. + ..-.|+|..++...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 45799999998754311 1 123677776543322110 000 1112346799999999999
Q ss_pred EEEeeecCCCCccccceEEEEcCCC
Q 007233 256 YKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 256 Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+||.....-|...-| ...|+|.+.
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~ 102 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPK 102 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCC
Confidence 999875333432223 357888654
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.01 Score=50.74 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=58.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+++... +.+++.|+|..... ...+ .|+|...+..... .... .....
T Consensus 17 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~ 73 (119)
T 2ed7_A 17 LPSAPRDVVPVLV-SSRFVRLSWRPPAE--AKGNIQTFTVFFSREGDNRER------ALNT--------------TQPGS 73 (119)
T ss_dssp SCCCCSCCEEEEE-CSSCEEEECCCCSC--CSSCEEEEEEEEEESSCCCCE------EEEC--------------CCTTC
T ss_pred CCcCCcceEEEec-CCCEEEEEEeCCCC--CCCcEEEEEEEEEeCCCCcce------eeEe--------------ecCCc
Confidence 4567777665532 46899999987542 1222 3444443322111 0000 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 4578999999999999998765566667899999999764
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.11 Score=54.04 Aligned_cols=47 Identities=23% Similarity=0.310 Sum_probs=26.8
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.+ ..+.. ....+.. .. ++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~--~~d~~----~~~~en~-~~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGL--SADPY----QAMAENS-VY----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCC--CCSCC----CTTCSCC-HH----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HH----HHhhCCCCCEEEeCCCcccc
Confidence 45677999999764 22110 0001111 11 1223 489999999999854
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.019 Score=49.20 Aligned_cols=96 Identities=18% Similarity=0.046 Sum_probs=57.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++. ..+.++++|+|...... + -..-.|+|...+....... ... .-..++-....
T Consensus 18 ~P~~~~~~-~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTLQ-PVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV---------------EMKATGDSEVY 80 (122)
T ss_dssp CCEEEEEE-ECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC---------------BCCCCSSEEEE
T ss_pred CCcceEEE-eccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EEE---------------EEecCCceeEE
Confidence 45555553 23468999999986430 1 1134566655432211000 000 00113445778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||+...|+|...
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765555566888888988764
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.021 Score=47.92 Aligned_cols=91 Identities=8% Similarity=-0.036 Sum_probs=55.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.++++|+|......+ -..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~~~-~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQAVS-TSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEEEC-SSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEEEe-cCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 45666666533 24689999998763211 11244556544322211 0000 0 1345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...+|+...|+|...
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998765556667888889998754
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0033 Score=63.00 Aligned_cols=64 Identities=23% Similarity=0.329 Sum_probs=41.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CC-ccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||+|.. ...++++++.. .+ .|.++++||++.. |... .+.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~-g~~~--~~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNK-GPDS--FGVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSSS-SSCH--HHHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCCC-CCCH--HHHHHHHHH----CCCE
Confidence 389999999932 23355555543 23 4999999999954 3322 123333322 4899
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.057 Score=55.67 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=31.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
...+|++|+|++.|.+||......|...+|.. .|+|++.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999997655565566655 89998865
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.017 Score=49.41 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee----cCC-CCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR----KGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~----~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.- .+.++++|.|....+ ...+...|-. ... ..+. ..+. ...
T Consensus 17 ~P~~P~~~~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~-----~~~~---------------~~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIAN-RTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFC-----QCYM---------------GSQ- 72 (118)
T ss_dssp CCCCCCCCEEEE-EETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCE-----EEEE---------------ESC-
T ss_pred CCcCCCCcEEec-cCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeE-----Eeec---------------cCC-
Confidence 355666665533 236899999988643 2334444443 221 1110 0000 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...||+...|+|.+.
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 3457899999999999998765556667888888998764
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.026 Score=48.15 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=28.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..++|+||+|||.|.++|.... ++...-+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 4578999999999999999763 2222223456778877543
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.015 Score=50.27 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=54.2
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
.-|.+|..+++.. .+.++++|+|....+... ..-.|+|.... ...+..... .. ++..
T Consensus 16 ~~P~~P~~~~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIST-ASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEEE-CCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEEE-ccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 3566777776643 246899999985432110 22456666543 222211000 00 1223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p~ 280 (612)
...++++|+|+++|.|||......|...+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 456789999999999999876444444455543 3555443
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.025 Score=49.12 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=31.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|+|.+||......|...||+...|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 567899999999999998765455556788888988764
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.011 Score=50.96 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++.. .+.++++|+|...... . -..-.|+|...+..... ... ++.....
T Consensus 31 ~P~~l~~~~-~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSLEV-VNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM-----ETL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCEEE-EETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE-----EEE-----------------CSSCSEE
T ss_pred CCeeeEEEE-cCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce-----EEe-----------------cCCcCEE
Confidence 455555432 2368999999876431 0 11234556544322111 000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...||+...|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 899999999999999876555666789999999864
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.046 Score=51.86 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=73.5
Q ss_pred cceEEEEEEeecc--cceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007233 125 GKGSLKLMLINQR--SDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l~n~r--~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~-----~~~~m~V~W~t~~~ 192 (612)
|..+..|.+.+.+ ..|.|.+...... -...|.++.| ..|.+|..+.+.... ..+++.|+|.....
T Consensus 64 ~~~~~~~~~~~L~~~~~Y~~~V~A~N~~---G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~ 140 (215)
T 1cd9_B 64 RQNNCSIPRKNLLLYQYMAIWVQAENML---GSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP 140 (215)
T ss_dssp TCCEEEEEGGGCCTTSCEEEEEEEEETT---EEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECCcccccceEEEEEEEEECCC---CCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC
Confidence 4455666655543 4778777652111 0112333322 256778776655431 57899999987532
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007233 193 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 267 (612)
... -.-.|+|. ..+...+.. .... .+......|.+|+|+|+|.+||......|.+
T Consensus 141 ~~~~~l~Y~v~y~~~~~~~~w~~----~~~~----------------~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~w 200 (215)
T 1cd9_B 141 SEYMEQECELRYQPQLKGANWTL----VFHL----------------PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFW 200 (215)
T ss_dssp GTTSCEEEEEEEEESSTTCCCEE----EEEE----------------ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCC
T ss_pred CCeEEEEEEEEEccCCCCCCcEE----Eecc----------------cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCC
Confidence 100 13456666 333322211 0000 1123567899999999999999876443333
Q ss_pred -cccceEEEEcCC
Q 007233 268 -IWSSEYQFKASP 279 (612)
Q Consensus 268 -~~S~~~~F~T~p 279 (612)
.||+...|+|+.
T Consensus 201 S~wS~~~~~~T~e 213 (215)
T 1cd9_B 201 SPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCCCEEECCCC
T ss_pred cCCCCccceecCC
Confidence 477888898864
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.02 Score=47.96 Aligned_cols=90 Identities=11% Similarity=0.144 Sum_probs=51.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|. +.+... +.+++.|+|......+ -..-.|+|...+...+.. ... ..-....
T Consensus 8 P~~p~-~~v~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~-----------------~~~~~~~ 64 (107)
T 2dn7_A 8 PGRPT-MMISTT-AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDF-----------------GKDDQHF 64 (107)
T ss_dssp CCCCE-EEEEEC-STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEE-----------------ETTCCEE
T ss_pred CCCCc-EeEEec-CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEe-----------------CCCccEE
Confidence 33444 444433 5789999999864211 112456666543322111 111 0122356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...+|. ..|+|..
T Consensus 65 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 7899999999999998764444445565 4577754
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0068 Score=53.26 Aligned_cols=40 Identities=13% Similarity=0.252 Sum_probs=33.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
.++++||+|+|+|.+||......|...||+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998765666778888999998653
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0089 Score=52.57 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=55.3
Q ss_pred CCCCCc-ceeeecCCCCCcEEEEEEeCCCCCCCcc-EEEEeecCCCCc----cccCcc-eEEecCCcCCCCccceeccCC
Q 007233 165 NPNAPV-YPRLAQGKTWNEMTVTWTSGYGINEAEA-FVQWGRKGGDRT----HSPAGT-LTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~p~-~~~La~~~~~~~m~V~W~t~~~~~~~~~-~V~yg~~~~~~~----~~~~~~-~t~~~~~mcg~pa~~~g~~~~ 237 (612)
-|.+|. .+++.- .+.++++|.|...... .... .++|........ ...... ..... ..
T Consensus 15 ~P~~P~~~~~~~~-~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--------------~~ 78 (127)
T 2dmk_A 15 APNPPSIREELCT-ASHDTITVHWISDDEF-SISSYELQYTIFTGQANFISLYNSVDSWMIVPN--------------IK 78 (127)
T ss_dssp SCCCCEEEEEEEE-EETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--------------EC
T ss_pred CCcCCCCCCEEEe-eeCCEEEEEECCCCCC-CccceEEEEEEecccccccccccCCCCcEEeec--------------cc
Confidence 466676 555432 2468999999987531 1223 677764111000 000000 00000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+ ...+++||+|+++|.|||......|. .+|+...++|++.
T Consensus 79 ~--~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 79 Q--NHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQ 118 (127)
T ss_dssp S--SEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSS
T ss_pred C--CeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCC
Confidence 1 23578999999999999987654555 5677888998764
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0091 Score=56.49 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=57.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC--C-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI--N-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+..... +++|+|...... . -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS--TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECSS--CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeeccC--eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 456676666654433 699999986321 1 122446666543322211 111000 001223
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765455556788888998764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.12 Score=48.69 Aligned_cols=107 Identities=17% Similarity=0.283 Sum_probs=57.7
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007233 130 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (612)
.+.|-+++. .|.|.+... +.+.|..+... ..+.+|..+++.. .+.++++|+|....+..-..-.|+|..
T Consensus 78 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~-----~~~p~P~~l~~~~-~~~~sv~l~W~~p~~~~i~~Y~v~~~~ 151 (203)
T 2gee_A 78 YYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQ-----TAVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSP 151 (203)
T ss_dssp EEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCEEEEEEE-EETTEEEEEEECCSSCCCSEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccEeeeec-----CCCcCCCceEEEE-cCCCEEEEEEcCCCCCCccEEEEEEEE
Confidence 344445443 567766552 33334333221 2223566665432 236899999998643212345566765
Q ss_pred cCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeec
Q 007233 205 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
..+... ...... ++-....+|+||+|++.|.++|....
T Consensus 152 ~~~~~~---~~~~~~-----------------~~~~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 152 VKNEED---VAELSI-----------------SPSDNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp TTCGGG---CEEEEE-----------------CTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCc---cEEEEc-----------------CCCcCEEEECCCCCCCEEEEEEEEec
Confidence 332110 001111 12234568899999999999998753
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.03 Score=45.40 Aligned_cols=84 Identities=20% Similarity=0.260 Sum_probs=46.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++... ..+++.|+|....+ ......|....+.. .... ..+ -..++
T Consensus 4 P~~P~~l~~~~~-~~~sv~L~W~~~~~---~~~i~~Y~v~~~~~-------~~~~---------------~~~--~~~~~ 55 (88)
T 1k85_A 4 PTAPTNLASTAQ-TTSSITLSWTASTD---NVGVTGYDVYNGTA-------LATT---------------VTG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSC---CSSEEEEEEEESSS-------EEEE---------------ESS--SEEEE
T ss_pred cCCCCccEEEec-cCCEEEEEECCCCC---CCCccEEEEEECCE-------EEee---------------cCC--CEEEe
Confidence 456665554432 36899999987642 12355555321110 0000 011 13468
Q ss_pred cCCCCCCEEEEEEeeecCCCC-ccccceEEEEc
Q 007233 246 KELWPNAMYTYKVGHRLFNST-YIWSSEYQFKA 277 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T 277 (612)
++|+||+.|+|+|......|. ...|...+|+|
T Consensus 56 ~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 999999999999987643443 22345555544
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.026 Score=47.62 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=51.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|..... .-..-.|+|........ ...... ++-...++|
T Consensus 3 p~~P~~l~v~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~~~~~l 60 (104)
T 2rb8_A 3 LDAPSQIEVKD-VTDTTALITWMPPSQ-PVDGFELTYGIKDVPGD---RTTIDL-----------------TEDENQYSI 60 (104)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEETTCTTC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEE-ecCCeEEEEEcCCCC-ccceEEEEEEECcCCCc---eEEEEc-----------------CCCcCEEEe
Confidence 45677666543 346899999987532 11234566765321110 000111 112235689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+||+|||+|.++|......|... .....|+|.+..
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred CCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 99999999999998753333221 224568887653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.038 Score=52.14 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=54.4
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCC------CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYG------INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
.+|..+++.. .+.++++|+|..... .....-.|+|...+..... ..+. .+..
T Consensus 6 ~~P~~l~~~~-~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~ 63 (211)
T 3p4l_A 6 MPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNA-----------------NATT 63 (211)
T ss_dssp CCCEEEEEEE-CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEE-----------------EESS
T ss_pred CCCCCEEEEe-cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEe-----------------CCCc
Confidence 3566665432 346899999997421 1112345666654332110 0000 0123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.++|......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4567999999999999998764455556788889998753
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0068 Score=63.19 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=43.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.+++++||+|.. ...+.++++... ++|.++++||++..+.... +.+..+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHH
Confidence 689999999843 234556665422 4799999999995433221 222222222
Q ss_pred -----hcCCCeEEcCCCCccC
Q 007233 357 -----ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -----~s~vP~~~v~GNHD~~ 372 (612)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2235699999999973
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.11 Score=51.43 Aligned_cols=102 Identities=17% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++. ..+.++++|+|....+ ....-.|+|...++.... .... .+.....+
T Consensus 112 ~~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~ 168 (290)
T 3r8q_A 112 NVSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYT 168 (290)
T ss_dssp CCCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEE
T ss_pred CCCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEE
Confidence 34567666654 2346899999998632 123355666554322110 0111 11223467
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+||+|++.|.++|......| .|. ...++|.|.+ ...+++...++
T Consensus 169 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 169 ITGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCc---ccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 899999999999998653222 233 3445665532 22355544443
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.022 Score=49.72 Aligned_cols=41 Identities=15% Similarity=-0.196 Sum_probs=33.0
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765556567888888998754
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.018 Score=50.30 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=34.0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.....+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 345678999999999999998765556667898899999763
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.019 Score=48.57 Aligned_cols=84 Identities=13% Similarity=0.013 Sum_probs=45.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
|.+|..+++. ..+.++++|+|...... ...+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~~-g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDHI-GAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSSC-CSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCCC-CCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4456555543 22468999999875421 1223 34554433322211100 011223
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 467899999999999998764334334444
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.025 Score=48.69 Aligned_cols=92 Identities=13% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--C-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--N-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+.- .+.++++|+|...... . -..-.|+|...++..+...... ....-.
T Consensus 11 p~~P~~P~v~~-v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~~ 69 (112)
T 1bpv_A 11 IDPPGKPVPLN-ITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILENE 69 (112)
T ss_dssp CCCCCCCEEEE-EETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSSE
T ss_pred CCCCCCCEEEE-eeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccCE
Confidence 45667766642 2468999999843211 1 1235677776544333211100 011123
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 278 (612)
.+++||+||+.|.|||......|. ..+|+.-...|.
T Consensus 70 ~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 578999999999999997654454 445655555543
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.11 Score=49.92 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=55.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.++++|+|......+ -..-.|+|....+..... ....... ........
T Consensus 98 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFNV-VSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEEE-CSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS-SCCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEEE-ecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc-CcceEEE--------------ecCCcceE
Confidence 355666666543 34689999998653211 112355666543322110 0000000 00112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASPY 280 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p~ 280 (612)
.+|+||+|++.|.++|......|...+|+ ...|+|.+.
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 68999999999999998765445555665 467888764
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.016 Score=49.63 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=27.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p 279 (612)
..++|++|+|++.|.+||......|...||+ ..+++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 4567899999999999998765555556666 34444443
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.096 Score=51.78 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=30.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
...+|+||+||+.|.++|......| ..+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998765445 4678999999975
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.046 Score=55.24 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=74.0
Q ss_pred cceEEEEEE--eecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007233 125 GKGSLKLML--INQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l--~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~-----~~~~m~V~W~t~~~ 192 (612)
|..+.+|.. +..-..|.|++..-... -...|.++.| .-|.+|..+++.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~---G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENAL---GTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETT---EEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCC---CCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 445666654 23335788887653111 1112333322 246677666654432 46899999987532
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007233 193 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 267 (612)
... -.-.|+|. ..+...+... .. ..+..+...|++|+|+|+|..||......|.+
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~----~~----------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALV----GP----------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEE----EE----------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEc----cc----------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 13456666 3333333211 00 01234677899999999999999976433444
Q ss_pred -cccceEEEEcCC
Q 007233 268 -IWSSEYQFKASP 279 (612)
Q Consensus 268 -~~S~~~~F~T~p 279 (612)
.||+...|+|+.
T Consensus 295 S~wS~~~~~~T~~ 307 (313)
T 2d9q_B 295 SDWSPSLELRTTE 307 (313)
T ss_dssp CCCCCCEEECCCC
T ss_pred CCCCCccceeCCc
Confidence 367778888875
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.013 Score=49.81 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=35.2
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999876566677999999999887654
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.044 Score=46.10 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=51.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++.-- +.++++|+|..... ...-.|+|.......+.. ..... -++. .++
T Consensus 8 ~~~~P~~l~~~~~-~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~-~~~~~-----------------~~~~--~~~ 64 (104)
T 2dkm_A 8 PLPPPRALTLAAV-TPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE-EREVQ-----------------VGRP--EVL 64 (104)
T ss_dssp SCCCCCCCEEEEE-CSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC-CEEEE-----------------ESSS--EEE
T ss_pred CCCCCceeEEEec-CCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc-eEEEe-----------------cCCC--EEE
Confidence 3456777766432 35899999976543 233456666543211100 00000 0122 788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|+|+|.++|......+... .....++|.|.
T Consensus 65 l~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~ 99 (104)
T 2dkm_A 65 LDGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTS 99 (104)
T ss_dssp EESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCC
T ss_pred ECCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCC
Confidence 999999999999998753222211 12345667654
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.023 Score=49.40 Aligned_cols=40 Identities=10% Similarity=-0.043 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||+...|+|++.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 3567899999999999998765556677899999999875
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.25 Score=48.84 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=45.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.+++.|+|....+ ....-.|+|...++....... ...+-....+
T Consensus 201 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 258 (290)
T 3r8q_A 201 AIDAPSNLRFLA-TTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEAT 258 (290)
T ss_dssp CCCCCEEEEEEE-EETTEEEEEEECCSS-CCCEEEEEEECTTSCCEECSS--------------------CCCTTCCEEE
T ss_pred CCCCCCccEEEe-eCCCEEEEEEeCCCC-cccEEEEEEEeCCCCcceeEe--------------------ccCCCccEEE
Confidence 366777666542 246899999987643 123456666654332211000 0012234567
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007233 245 LKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~ 262 (612)
++||+||+.|.|+|....
T Consensus 259 i~~L~p~t~Y~~~V~A~~ 276 (290)
T 3r8q_A 259 ITGLEPGTEYTIYVIALK 276 (290)
T ss_dssp ECSCCTTCEEEEEEEEEE
T ss_pred ECCCCCCCEEEEEEEEEe
Confidence 999999999999998753
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.33 Score=47.62 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|....+.... ...... +.+-....+
T Consensus 104 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRVGS-RTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEEEe-cCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 456776666533 246899999997642 123456667654332210 111110 011256778
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccce--EEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+++|+|++.|.++|......| .|.. ..+.|.|.+ ...+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCC--CCccEEeEecC
Confidence 999999999999998763322 3443 345554432 22355544443
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.037 Score=47.25 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=33.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998765556667898899999764
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.03 Score=61.83 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=70.8
Q ss_pred EEEEEEeeccc--ceEEEEEeCCCC---CcEEEEeeccccc-cCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccE
Q 007233 128 SLKLMLINQRS--DFSVALFSGGLL---KPKLVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAF 199 (612)
Q Consensus 128 ~~~~~l~n~r~--~~~f~~f~~~~~---~~~~~a~s~~~~~-~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~ 199 (612)
..++.|-+.+. .|.|.+....-. .| -..|..+.+ ..+.+|..+.+ ...+.++++|+|......+ -..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 34455555554 688887663211 11 001112222 24557777776 4445789999999753211 01235
Q ss_pred EEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 200 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 200 V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+|...+... ...+.. +....++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 6666543320 001110 112356799999999999999876556666789999999987
Q ss_pred CC
Q 007233 280 YP 281 (612)
Q Consensus 280 ~~ 281 (612)
..
T Consensus 534 ~~ 535 (536)
T 3fl7_A 534 PE 535 (536)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.015 Score=49.53 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++. ..+.++++|.|....+.. -..-.|+|...+. ..+.... . .....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA-----N----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE-----E----------------EECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc-----c----------------ccCcC
Confidence 45567666654 234689999998654211 0123455544321 1111000 0 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEE-EEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQ-FKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~-F~T~p~ 280 (612)
..++++|+|++.|.|||......|...||..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998764444445565544 777654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.73 E-value=0.054 Score=45.53 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=51.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--C--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYG--I--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~--~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++. .-+.+++.|+|..... . .-..-.|.|...+..... .....+.. +-...+
T Consensus 7 ~P~~~~~~-~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-~~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYTE-AVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDS-DYKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEEE-ECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGG-GCEEEEEE-----------------TTCSEE
T ss_pred CCceeEEE-EcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCC-ceEEEEEc-----------------CCceEE
Confidence 45444442 2346899999987531 0 011235777765432100 00011111 111245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
+|++|+|+|.|..+|..-...|.+..|+...++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998654445556677777777
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.029 Score=48.78 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeec---CCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRK---GGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.- ...++++|.|....+.. -..-.|+|... ....+.... ... ..+.
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~---~~~---------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH---QLS---------------NEPD 77 (124)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE---EEE---------------SCTT
T ss_pred CCccCCCCEEEE-ecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee---eEc---------------cCCC
Confidence 455666655532 35789999997654311 11245566542 111121000 000 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPYP 281 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~~ 281 (612)
...+++++|+|++.|.|||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 345688999999999999987644455555654 468887643
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.069 Score=52.18 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=56.0
Q ss_pred CCCCCcceeeecCCC-C----CcEEEEEEeCCCCC------CCccEEEEeecCCCCccccCcceEEecCCcCCCCcccee
Q 007233 165 NPNAPVYPRLAQGKT-W----NEMTVTWTSGYGIN------EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVG 233 (612)
Q Consensus 165 ~~~~p~~~~La~~~~-~----~~m~V~W~t~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g 233 (612)
.|.+|.-+.+.+... . .++.|+|....... .-.-.|+|..++...+....
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------- 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------- 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-------------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe-------------------
Confidence 577887776544332 2 45999999864210 11345566554332221100
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCC--CccccceEEEEcC
Q 007233 234 WRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS--TYIWSSEYQFKAS 278 (612)
Q Consensus 234 ~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~~~S~~~~F~T~ 278 (612)
......+.|.+|+||++|..||.....+| -..||+...|+|+
T Consensus 191 ---~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ---PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ---CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ---ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 01124567899999999999999876555 3467778888775
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.27 Score=50.21 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=49.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|..+.+.. .+.+++.|+|..... ....-.|+|...++... ....+. ++-....+
T Consensus 275 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 332 (368)
T 1fnf_A 275 VSDVPRDLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTAT 332 (368)
T ss_dssp CCCSCEEEEEEE-EETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEE
T ss_pred CCCCCCeeEEEe-cCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEEE
Confidence 455676665533 236899999987643 12234566665433211 001111 11234568
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
++||+||+.|.|+|......|...+|.
T Consensus 333 ~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 333 ISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp ECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred ecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 899999999999998765455444553
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.028 Score=50.60 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=32.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|..||......|.+.+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 4678999999999999998654344456788889999864
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=95.60 E-value=0.049 Score=54.70 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=58.4
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++... .+.++++|+|....... ...-.|+|...+...+...... + .++...
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 5677877776543 35789999998754210 0123566665543322111000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.+ .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56899999999999999976444443 456778898864
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.055 Score=46.32 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=51.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.+++.|+|..... .-..-.|+|...++... .... ++-...++
T Consensus 7 ~p~~P~~l~~~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRALN-LTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEECCC-CSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEEEe-ccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 455676555432 237899999987532 11233466654322110 0110 11224578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|+|+|.++|......+... .....|+|.+.
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~ 97 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLE 97 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCC
Confidence 999999999999998753222211 23457888754
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.054 Score=51.62 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=64.8
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccE
Q 007233 126 KGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAF 199 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~ 199 (612)
..+-+|+.+..-..|.|.+-.-.... -..|.++.| .-|.+|.-+++......+++.|+|....... .-.-.
T Consensus 68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G---~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~ye 144 (206)
T 3v6o_A 68 FYECIFQPIFLLSGYTMWIRINHSLG---SLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQ 144 (206)
T ss_dssp CEEEEECSCCTTSCEEEEEEEC---C---CEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEE
T ss_pred CceEEeCcHHhcccEEEEEEEEcCCc---cccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEE
Confidence 33555654444457777765431110 011333333 3677888777766545789999998764211 01344
Q ss_pred EEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007233 200 VQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE 272 (612)
Q Consensus 200 V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~ 272 (612)
|+|...+. ..+.. ... .......+.|.+|+|||+|..||......|.+.||+.
T Consensus 145 v~y~~~~~~~~w~~----~~~----------------~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeW 198 (206)
T 3v6o_A 145 IRYGLSGKEVQWKM----YEV----------------YDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNW 198 (206)
T ss_dssp EEEEESSSSCCCEE----EEE----------------CC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCC
T ss_pred EEEEECCCCCceEE----Eec----------------ccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCC
Confidence 55655431 12211 000 0111235789999999999999997754455567664
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.015 Score=59.78 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhc--CCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s--~vP~ 362 (612)
.+++++||.|.. ...+.++++.. ...+.++++||+++ .|..+ .+.+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CCCCh--HHHHHHHHHHHhhCCCcE
Confidence 359999999843 23455555542 34677899999995 44332 122333322221 2348
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.042 Score=47.03 Aligned_cols=94 Identities=13% Similarity=0.158 Sum_probs=53.1
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCCCCccEEEEe----ecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
.|.+|..+...+. .+.++++|+|....+ ...+...|. ..+ ..+. ... . ..++.
T Consensus 17 ~P~~P~~~~~~~~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~------~~~-~------------~~~~~ 74 (121)
T 1wf5_A 17 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWT------VLL-A------------SVDPK 74 (121)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCE------EEE-S------------SCCTT
T ss_pred CCccCCCcceeeEeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCce------EeE-c------------ccCCC
Confidence 4567776622222 346899999986532 223444443 322 1111 000 0 00122
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p~ 280 (612)
....+++||+|++.|.|||......|...+|..- .++|++.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 75 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred ccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 3456889999999999999876545555566654 5677654
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.054 Score=45.99 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=52.1
Q ss_pred cCCCCCcceeeecCC-CCCcEEEEEEeCCC-----CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 164 TNPNAPVYPRLAQGK-TWNEMTVTWTSGYG-----INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 164 ~~~~~p~~~~La~~~-~~~~m~V~W~t~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
.-|.+|..+++..-. ..+++.|+|..... ...-.-.|+|...+...+.. ...
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~~------------------ 63 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VEL------------------ 63 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EEE------------------
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Eec------------------
Confidence 456778777776543 46899999987642 01124567777654432211 000
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
.-...+.|.+|+||++|..||..... |.+.||+
T Consensus 64 ~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~ 96 (109)
T 1uc6_A 64 SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSD 96 (109)
T ss_dssp SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCC
T ss_pred ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCc
Confidence 00124578999999999999997642 4444544
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.088 Score=44.99 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=52.5
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++. .-+.++++|+|..... .-..-.|+|....+... ..... ++-...++|+
T Consensus 9 ~pP~~l~~~-~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~----~~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGFS-DVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHS----GQTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEEE-SCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCB----CCEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEEE-EccCCeEEEEeeCCCC-CccEEEEEEEeCCCCce----eEEEc-----------------CCCcCEEEcC
Confidence 466666653 2347899999986532 12334677765433211 00110 1122457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
||+|+|+|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999865333332212 3468887433
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.13 Score=44.90 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=33.7
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|..-...|.+.+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765556667899999999764
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.1 Score=43.38 Aligned_cols=75 Identities=23% Similarity=0.290 Sum_probs=45.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.. .+.+++.|+|..... .-..-.|+|...+..... .... .++-.-.++|
T Consensus 2 p~~P~~l~~~~-~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~-----------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVTN-ITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVD-----------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEE-----------------ECTTEEEEEE
T ss_pred CccCCccEEEE-ecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEE-----------------ECCcceEEEE
Confidence 45666666543 347899999987642 122345667644321100 0000 0223456789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+|+|+|.+||....
T Consensus 60 ~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 60 TNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998753
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.38 E-value=0.084 Score=50.84 Aligned_cols=106 Identities=16% Similarity=0.191 Sum_probs=61.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+++.. .+.++++|+|....+ ....-.|+|...++.... ..... +.....+|
T Consensus 6 ~~~P~~l~~~~-~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i 62 (234)
T 3f7q_A 6 LGAPQNPNAKA-AGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVEL 62 (234)
T ss_dssp CCCCEEEEEEE-CSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEE
T ss_pred CCCCcceEEEE-cCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEE
Confidence 34566666533 246899999987632 223345667654332211 00110 11235678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC-CCCCCCeEEEEEee
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-PGQNSLQRVVIFGD 294 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~-~g~~~~~rf~v~GD 294 (612)
+||+|+|.|.++|......|...+|....|+|... |.....+++...++
T Consensus 63 ~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 63 TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 99999999999998764445556787888998743 22223355544433
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.03 Score=58.03 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=42.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---ccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STV 360 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~v 360 (612)
..|++++||.|.. ...+.++++.... -+.++++||+++ .|..+ -+-+..+..+. ..-
T Consensus 63 ~~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~ 124 (335)
T 3icf_A 63 DVKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFVD-RGSWS--CEVALLFYCLKILHPN 124 (335)
T ss_dssp TCEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTT
T ss_pred CceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCccC-CCcCh--HHHHHHHHHHhhhCCC
Confidence 3689999999854 3345666665332 246999999995 44322 12222222221 123
Q ss_pred CeEEcCCCCccC
Q 007233 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
.++.+.||||..
T Consensus 125 ~v~llrGNHE~~ 136 (335)
T 3icf_A 125 NFFLNRGNHESD 136 (335)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEecCchhhh
Confidence 488999999953
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.072 Score=49.02 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=44.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
.|.+|..+++.. .+.+++.|+|....... ...-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~~-~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLMD-VTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEEE-ECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEEe-ccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 456777666542 23689999998753211 112355555443322111 000 0112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNS 265 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg 265 (612)
..++++|+|++.|.|+|......|
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n~~G 182 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQNEKG 182 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTE
T ss_pred EEEeCCcCCCCEEEEEEEEEeCCc
Confidence 457899999999999999764333
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.11 Score=43.69 Aligned_cols=91 Identities=21% Similarity=0.227 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.-- +.+++.|+|..... .-..-.|+|...++. .. ... -++-...++
T Consensus 7 ~p~~P~~l~v~~~-~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~----~~~-----------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEAKEV-TPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ----EIL-----------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEEESC-CSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE----EEE-----------------ECSSCSEEE
T ss_pred CCCCCCceEEEec-cCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE----EEE-----------------ECCCccEEE
Confidence 4556766665432 36899999987532 112235666543221 10 000 012234678
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|++.|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998753333221 23467888643
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.021 Score=59.18 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=41.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+. +-+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~VD-RG~~s~--evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQSL--ETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcCC-CCCChH--HHHHHHHHhhhhcCCceE
Confidence 58999999853 23455666543 34577999999995 444321 222332222 1223589
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.033 Score=48.34 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=28.3
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~ 280 (612)
.+.+|+|++.|.|||......|...||.. ..|+|.+.
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 36799999999999987654555567776 47888764
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.24 E-value=0.14 Score=48.05 Aligned_cols=91 Identities=18% Similarity=0.058 Sum_probs=51.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+.+ ...+.++++|+|....... -..-.|+|.. ....+.. ..+. ++....
T Consensus 109 ~P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~---~~~~-----------------~~~~~~ 166 (209)
T 2vkw_A 109 EPSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKP---EIRL-----------------PSGSDH 166 (209)
T ss_dssp SCCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCC---CEEE-----------------CTTCCE
T ss_pred CCCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCce---eeec-----------------CCCccE
Confidence 3555655443 2335789999999863211 1224566665 2211110 0110 112234
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
.+|+||+|++.|.+||......|...+|+...+++
T Consensus 167 ~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 167 VMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 67999999999999998765455555666655554
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.047 Score=51.24 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. +.++++|+|....+.. -..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 456788777766 7899999999763211 1123566654322 1111100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc-ceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWS-SEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S-~~~~F~T~p~ 280 (612)
...+ +|+|++.|.|||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999875444545566 4577888754
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.067 Score=45.95 Aligned_cols=40 Identities=20% Similarity=0.057 Sum_probs=32.6
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...+|+...|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765556567888889999753
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.12 E-value=0.15 Score=47.95 Aligned_cols=103 Identities=12% Similarity=-0.055 Sum_probs=54.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+.+.. .+.++++|+|....+.....-.|+|...+..... ..... ++-....+|+|
T Consensus 25 ~P~~l~~~~-~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSFVD-ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFV-----------------DSSVGYYTVTG 83 (203)
T ss_dssp CCEEEEEEC-CTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEE-----------------ETTCCEEEECS
T ss_pred CCCccEEEe-cCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEc-----------------CCCccEEEeCC
Confidence 454444322 2468999999986431112345666654332110 00000 01123567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+|++.|.++|...... +.|....+++...+.....+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 235555565544332333455554444
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.059 Score=45.54 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=46.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|+|....... -..-.|+|...+...+..... .+....
T Consensus 8 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVED-VTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEEE-ECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEEe-ccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 345565555433 24689999998754211 112345555443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcc
Confidence 567899999999999998764333333343
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.13 Score=44.38 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=48.6
Q ss_pred eecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCc-----cccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 174 LAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRT-----HSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 174 La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~-----~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
|.+.+ +.++++|+|....+ .-..-.|+|....+... ......... ++-...++|+|
T Consensus 15 L~v~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----------------~~~~t~~~l~g 76 (112)
T 2cui_A 15 LSVTDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----------------PGTRHSAVLRD 76 (112)
T ss_dssp CEEESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----------------ETTCCEEEECS
T ss_pred eEEEeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEEc-----------------CCCcCEEEeCC
Confidence 33443 47899999987532 12345677775432100 000001111 12234689999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
|+|||+|..+|......+.. -.-....+|.+.+
T Consensus 77 L~PgT~Y~~~V~A~~~~~~s-~p~~~~~~T~~~~ 109 (112)
T 2cui_A 77 LRSGTLYSLTLYGLRGPHKA-DSIQGTARTLSGP 109 (112)
T ss_dssp CCTTCEEEEEEEEECSSSEE-EEEEEEEECCCCS
T ss_pred CCCCCEEEEEEEEEECCccc-CCEEEEEEECCCC
Confidence 99999999999875322211 1224566776543
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.98 E-value=0.046 Score=46.91 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=55.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+.+|..+.+.. ..+++.|+|..+.... -..-.|+|.. ++..+..... .+ ++-....
T Consensus 8 ~~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~--~~-----------------~~~~t~~ 65 (108)
T 1v5j_A 8 LSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDP--AV-----------------AGTETEL 65 (108)
T ss_dssp CCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEE--EE-----------------CSSCCEE
T ss_pred CCCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeee--ec-----------------CCCcCEE
Confidence 34666666644 3578999999875321 1234677876 2222321110 01 1223445
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
++.+|+|+++|.+||......|....|+...++|...
T Consensus 66 ~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 66 LVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp ECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 6999999999999998654445445566677777654
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.051 Score=55.77 Aligned_cols=68 Identities=16% Similarity=0.231 Sum_probs=41.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~vP 361 (612)
.|++++||.|.. ...+.++++... .-+.++++||+++. |..+ -+-+..+..+. ..-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCccCC-CcCh--HHHHHHHHHhhhhcCCc
Confidence 589999999853 234555665432 23469999999954 4322 12222222221 1235
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88899999964
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.15 Score=49.12 Aligned_cols=95 Identities=17% Similarity=0.228 Sum_probs=57.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
+.+|.-+++.... .+++.|+|....... .-.-.|+|..++. .+... ...+. .+..+
T Consensus 106 ~~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~~ 165 (214)
T 2b5i_B 106 LMAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQE 165 (214)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCCC
T ss_pred CCCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccce
Confidence 4677777776533 368999998864210 0134566655432 12111 11111 11234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC-C---ccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNS-T---YIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg-~---~~~S~~~~F~T~p~ 280 (612)
.+.|.+|+||++|..||......| . ..||+...|+|.+.
T Consensus 166 ~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 166 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 677899999999999999875322 2 36788899999874
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.12 Score=47.56 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=57.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.- .+.++++|+|....... ...-.|+|...+...+.... .. ....
T Consensus 5 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVKE-VTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEEE-ECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEEE-ecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 456776665542 24689999999863211 11235556554332221100 00 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC-CCCCCCCeEEEEEee
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP-YPGQNSLQRVVIFGD 294 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p-~~g~~~~~rf~v~GD 294 (612)
..++++|+|++.|.|+|......|...+|....+.|.. .|.....+++...++
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 46789999999999999876444444445444444432 222223455554443
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.09 Score=44.60 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=48.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..+........+++.|+|....+ +..+.-|+... +..+...+. .. .+. ..
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~~---~~~Y~VyR~~~~~~~~~~i~~--~~-----------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAPG---ANSYNVKRSTKSGGPYTTIAT--NI-----------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCTT---CSEEEEEEESSTTCCCEEEEE--EE-----------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCCC---CCEEEEEEecCCCCCcEEEee--cC-----------------CCC--EE
Confidence 4567766665543345789999998532 44555565432 111111000 00 011 12
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+.++|+||++|+|+|..-...|....|..-+.+++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECC
Confidence 35899999999999986543333344555554443
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.037 Score=56.44 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++. |..+. +-+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~VDr-G~~s~--evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDR-GKQSL--ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSS-SSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCcccCC-CCCcH--HHHHHHHHHHhhCCCcEE
Confidence 48999999854 23455666543 345778899999954 43221 222222221 1123589
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999963
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.13 Score=48.35 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456799999999999999876545666778888999998654
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.32 Score=47.32 Aligned_cols=95 Identities=20% Similarity=0.233 Sum_probs=58.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|.-+.+.......++.|+|......+ .-.-.|+|.... ...+.. ... ...
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v~~-----------------~~t 170 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----VNL-----------------SST 170 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----EEE-----------------SSS
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----EEe-----------------cCc
Confidence 677888777776655677999998864211 113456666543 122211 000 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecC-CCC---ccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLF-NST---YIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~-dg~---~~~S~~~~F~T~p~ 280 (612)
...+.+.+|+|+++|..||..... .+. ..||+...|+|++.
T Consensus 171 ~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 171 KLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp EEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred eeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 234567899999999999997652 222 24677789999764
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.86 Score=51.52 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=31.6
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce---EEEEcCCC
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE---YQFKASPY 280 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~---~~F~T~p~ 280 (612)
-...++|+||+|++.|.+||......|...+|.. ..|+|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987644455555655 77888654
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.034 Score=47.98 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=44.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|.|....... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIED-VWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEEE-EETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEEE-ecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 456777766542 23579999998754211 112456666543332211100 01112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007233 242 TSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
..++++|+|++.|.|||....
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEee
Confidence 347899999999999998753
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.56 E-value=0.19 Score=43.22 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=19.7
Q ss_pred eEEEEEecCCCCCCEEEEEEeee
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
-...++++||+|++.|.+||...
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A~ 91 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILAV 91 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEEE
Confidence 34567899999999999999865
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.54 E-value=0.11 Score=53.38 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=52.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++......++++|+|....+.....-.|+|....+..... ..... .+.....++
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45677777664443457999999864211223466666543321100 00000 112345689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.|+|...... ++|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999875322 3455445555443
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.15 Score=41.91 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=49.3
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++.- .+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+
T Consensus 3 ~~P~~l~v~~-~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (98)
T 3teu_A 3 DAPTDLQVTN-VTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTIT 60 (98)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEEC
T ss_pred CCCCceEEEE-ecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEec
Confidence 3555555432 235899999987632 112345677643321110 00111 1123456899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
||+|++.|.++|..... .+.|+..++.+.+
T Consensus 61 ~L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~ 90 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKD---NQESPPLVGTQTT 90 (98)
T ss_dssp SCCTTCEEEEEEEEEET---TEECCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeC---CCCCCCeEEEecc
Confidence 99999999999987532 2346655555544
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.18 Score=42.88 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.+++.|+|......+. ..-.|+|...+.... ...... .+....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSFSE-ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEEES-CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEEEE-CCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 355565555432 246899999987542110 123455544322110 000110 123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 273 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 273 (612)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999876545555566654
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.047 Score=56.88 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=40.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+. +-+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSTTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCccC-CCcChH--HHHHHHHHhhhhcCCcEE
Confidence 58999999854 23455555542 34678999999994 443321 2222222221 123488
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.19 Score=51.10 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCCCCcceeeecCC-CCCcEEEEEEeCCCCCC----CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINE----AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~-~~~~m~V~W~t~~~~~~----~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.... +.+++.|+|........ ..-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 46778777776544 46899999998653211 123466665543332110 00 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccc---cceEEEEc
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIW---SSEYQFKA 277 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~---S~~~~F~T 277 (612)
-...+|.+|+|++.|.+||......|.+.| |+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 235678999999999999997643344444 44444444
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.14 Score=49.35 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=56.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|.-+++......+++.|+|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4678888887765457899999988643100 12355665443222210 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCC----CC-ccccceEEEEcC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFN----ST-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~d----g~-~~~S~~~~F~T~ 278 (612)
.+.|.+|+||++|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999977421 11 457778889983
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.27 E-value=0.081 Score=57.35 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=41.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CccEEEEeCcccccCCchhHHHHHHHhhhh--hhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~--l~s~vP 361 (612)
.|++++||.|.. ...+.++++... ..|.++++||+++ .|..+ .+-+..+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~vd-rG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEeccccC-CCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999843 234556665432 2356999999995 44322 122222211 122457
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.21 E-value=0.18 Score=46.99 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=51.3
Q ss_pred CCcceeeec-CCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 168 APVYPRLAQ-GKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 168 ~p~~~~La~-~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
+|..+++.- +...++++|+|....+..-..-.|+|........ ...... ++-...++|+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 61 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGR---WKEATI-----------------PGHLNSYTIK 61 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSC---CEEEEE-----------------CTTCCEEEEC
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCc---eEEEec-----------------CCCccEEEec
Confidence 455665543 2237899999998632122334566765432110 001111 1122367899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
||+|++.|.++|......|...++ ...|+|.+
T Consensus 62 ~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~~ 93 (201)
T 2ha1_A 62 GLKPGVVYEGQLISIQQYGHQEVT-RFDFTTTS 93 (201)
T ss_dssp SCCTTEEEEEEEEEECTTSCEEEE-EEEEEECC
T ss_pred CCCCCCEEEEEEEEEecccccCce-eEEEecCC
Confidence 999999999999876433443333 45666643
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.17 E-value=0.24 Score=45.46 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=50.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|...++... .... ++-....+
T Consensus 6 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEVSD-PTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEEEe-cCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 456777666543 346899999997543 12345566653221110 0110 11123457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYP 281 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~ 281 (612)
|+||+|++.|.++|.... + .+.|. ...++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCC
Confidence 899999999999998753 2 22343 4567776543
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.12 E-value=0.052 Score=59.06 Aligned_cols=24 Identities=8% Similarity=0.065 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.+...++++++++++-||.-.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchh
Confidence 467899999999999999999865
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.03 E-value=0.25 Score=40.23 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=41.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|+|..... .-..-.|+|....+... .. +.. ..+-...++|+|
T Consensus 4 ~P~~l~~~~-~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~-------~~-----~~~--------~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFTD-VDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH-------EL-----FPA--------PDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEEE-EETTEEEEECCCCSS-CCSCEEEEEEETTTEEE-------EE-----CCC--------CCSSCCEEEECS
T ss_pred CCCccEEEe-ecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc-------eE-----Eec--------CCCCccEEEeCC
Confidence 455555542 235899999976531 11234566754322100 00 000 012235678999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||++|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998753
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.02 E-value=0.27 Score=40.62 Aligned_cols=84 Identities=19% Similarity=0.400 Sum_probs=52.7
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccC---CCeEEEE
Q 007233 168 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD---PGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~---~g~~h~a 243 (612)
.|.|+.++-.. .+++-.|.|.......-..-.+.|+.+... + -|++ |+.+..-
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~------g-----------------~Wke~~Ip~h~nSY 63 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV------G-----------------RWKEATIPGHLNSY 63 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS------S-----------------CCEEEEECSSCCEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC------C-----------------ceeEEEecCccceE
Confidence 46666665443 489999999987431001233444443221 0 1222 5677778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce--EEEEc
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKA 277 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T 277 (612)
+|+||+||..|+=+|-+.. ..+|+++ +.|.|
T Consensus 64 tI~GL~P~~~YE~qv~S~~---ryG~~Evs~f~FtT 96 (98)
T 1oww_A 64 TIKGLKPGVVYEGQLISIQ---QYGHQEVTRFDFTT 96 (98)
T ss_dssp EECSCCSSEEEEEEEEEEE---SSSCEEEEEEEEEE
T ss_pred EEecCCCCcEEEEEEEEee---ccCcccceEEEEEe
Confidence 8999999999999998864 3567765 45555
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.48 Score=51.52 Aligned_cols=133 Identities=13% Similarity=0.192 Sum_probs=73.9
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcE--EEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEE
Q 007233 126 KGSLKLMLINQRSDFSVALFSGGLLKPK--LVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQ 201 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~--~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~ 201 (612)
..+..|..+.....|.|.+-........ .+... ...-..|.+|..+++.. .+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~-~~~~VkP~PP~nl~v~~-~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVN-ITEKVYPHTPTSFKVKD-INSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEEC-GGGGBCCCCCEEEEECC-SSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEE-eccccCCCCCeeeEEEE-ecCCeEEEEECCCCCCCCceEEEEEE
Confidence 4456666555555777776653211110 01110 01113567777777642 24689999998764211 1235677
Q ss_pred EeecCCCC-ccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEc
Q 007233 202 WGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKA 277 (612)
Q Consensus 202 yg~~~~~~-~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T 277 (612)
|...+... +.. .++. + ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~-----~---------~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ-----G---------VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB-----C---------CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe-----c---------cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 77654321 110 0000 0 00123456789999999999999987 4454 45778888988
Q ss_pred CC
Q 007233 278 SP 279 (612)
Q Consensus 278 ~p 279 (612)
+.
T Consensus 480 ~E 481 (483)
T 3e0g_A 480 TE 481 (483)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=93.75 E-value=0.29 Score=45.96 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++. ..+.+++.|+|..... .-..-.|+|........ ....+. ++-...++|+
T Consensus 105 ~~P~~l~v~-~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEVV-AATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEEE-EEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEEE-eCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 345544442 2246899999976532 11234566765432110 000111 1122467899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
||+|+|+|.++|..-...|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999765555544566555554
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.54 E-value=0.23 Score=43.12 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=44.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEEE-ECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEe-cCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 35666666543 346899999987542 11234566765433210 000110 112346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+|.|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.39 E-value=0.22 Score=43.30 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=49.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.-. + ++++|+|......+ -..-.|+|... .. ...... -++-....
T Consensus 28 P~~P~~l~~~~~-~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~------~~~~~~---------------~~~~~~~~ 83 (126)
T 1x5i_A 28 PEVPSSLHVRPL-V-TSIVVSWTPPENQNIVVRGYAIGYGIG-SP------HAQTIK---------------VDYKQRYY 83 (126)
T ss_dssp CCSCSEEEEEEE-T-TEEEEEEECCSCTTBCCCEEEEEECSS-CG------GGEEEE---------------CCTTCCEE
T ss_pred CCCCCeeEEEec-C-CEEEEEEcCCCCCCCCEeEEEEEEEcC-CC------CceEEE---------------eCCCeeEE
Confidence 556666666554 3 89999998764211 01234555421 10 000000 01233556
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|++|+|+++|.++|......|...++.. .++|.+.
T Consensus 84 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~ 119 (126)
T 1x5i_A 84 TIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH 119 (126)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence 89999999999999987644444444432 4555543
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.24 Score=54.02 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=74.3
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCc
Q 007233 125 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAE 197 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~ 197 (612)
+..+.+|.+...-..|.|.+..-..... ..| .+.| .-|.+|.-+++.. .+.+++.|+|....... .-.
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~---~~S-~~~~~~~~~v~P~PP~nl~v~~-~s~~sl~LsW~pP~~~~g~~l~ 419 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ---AQS-AVVINVTERVAPHDPTSLKVKD-INSTVVTFSWYLPGNFTKINLL 419 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE---EEE-EEECCGGGTBCCCCCEEEEEEE-CSTTCEEEEEEEEEECSSSEEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC---ccc-eEEEEecCCCCCCCCeEEEEEe-cCCCEEEEEEeCCCCCCCcceE
Confidence 4456667665433678887765211100 112 2222 2466777666543 35789999998763211 012
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEE
Q 007233 198 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQ 274 (612)
Q Consensus 198 ~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~ 274 (612)
-.|+|...+...+.. ..+... .....+.+.|.+|+|+|+|..||.... .|. ..||+...
T Consensus 420 YeV~Yr~~~~~~w~~---~~~~~~--------------~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~ 481 (488)
T 2q7n_A 420 CQIEICKANSKKEVR---NATIRG--------------AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKR 481 (488)
T ss_dssp EEEEEBCTTSCCEEE---EEEEEC--------------CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCC
T ss_pred EEEEEEECCCCCceE---EEEEec--------------CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEe
Confidence 335555443221110 011100 012356779999999999999999776 555 36777788
Q ss_pred EEcCCC
Q 007233 275 FKASPY 280 (612)
Q Consensus 275 F~T~p~ 280 (612)
|+|++.
T Consensus 482 ~~T~e~ 487 (488)
T 2q7n_A 482 HLTTEA 487 (488)
T ss_dssp BCCCCC
T ss_pred EECCCC
Confidence 988763
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.17 E-value=0.38 Score=46.22 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=57.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-------CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
-|.+|..+.+.. .+.+.|+|...... ..-.-.|+|...+. .+.... ..... ...
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~-~~~~~--------------~~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSP-RRKLI--------------SVD 160 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCC-EEEEE--------------CSS
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceecc-cceeE--------------ecC
Confidence 567787666652 46899999986421 01234566665542 221110 00000 001
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC---c---cccceEEEEcCCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNST---Y---IWSSEYQFKASPY 280 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~---~~S~~~~F~T~p~ 280 (612)
+....+.+.+|+||++|..||......|. + .||+...|+|++.
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 23456678899999999999997654332 3 4678899999875
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=93.12 E-value=0.33 Score=45.48 Aligned_cols=95 Identities=16% Similarity=0.270 Sum_probs=48.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceec-cCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGW-RDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~-~~~g~~h 241 (612)
+.+|..+++.. .+.++++|+|....... ...-.|+|...+. ..+........+.. +. + ...+-..
T Consensus 2 ~~pP~~~~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~----~~~~~~~~~ 70 (214)
T 2ibg_A 2 TYPPTPPNVTR-LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PK----WNSELGKSF 70 (214)
T ss_dssp CCCCCCCEEEE-EETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SS----CSSSSEEEE
T ss_pred CCCCCCCEeeE-ecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cc----cccccCcce
Confidence 34666666533 24689999998754311 1123345554332 22221111111000 00 0 0112456
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~ 100 (214)
T 2ibg_A 71 TASVTDLKPQHTYRFRILAVYSNNDNKESN 100 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCEEECC
T ss_pred eEEecCCcCCCEEEEEEEEEecCCCCCCCC
Confidence 778999999999999998653334333444
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=93.12 E-value=0.35 Score=49.62 Aligned_cols=105 Identities=15% Similarity=0.014 Sum_probs=55.5
Q ss_pred CCCcceeeecCCCCC-cEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 167 NAPVYPRLAQGKTWN-EMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 167 ~~p~~~~La~~~~~~-~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+.+.... .+ +++|+|..........-.|+|....+..... ..... ++......|
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEc-----------------CCCccEEEE
Confidence 356556554433 45 9999999764211223466676543321100 00011 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
++|+|++.|.|+|..... .++|....+++.+.......+++...++
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~~~~p~p~~l~~~~~~~ 109 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTIIPEVPQLTDLSFVDITD 109 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEECCCCCCCSCCEEECCCS
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEcCCCCCCceEEEEecCC
Confidence 999999999999987532 2346555555543222223355444333
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.96 E-value=2.8 Score=40.88 Aligned_cols=136 Identities=12% Similarity=0.115 Sum_probs=65.2
Q ss_pred ccceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCcccc
Q 007233 137 RSDFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSP 213 (612)
Q Consensus 137 r~~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~ 213 (612)
...|.|.+... |.+.|..+..... ....+..|..++.... .++++|+|..... ....-.|+|...+.....
T Consensus 71 ~t~Y~~~V~A~n~~G~s~~s~~~~~~~-~~~~~~p~~~~~~~~~--~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-- 144 (290)
T 3l5i_A 71 NDRYLATLTVRNLVGKSDAAVLTIPAC-DFQATHPVMDLKAFPK--DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC-- 144 (290)
T ss_dssp SSCEEEEEEEEESSCBCCCEEEEECCT-TCCCCCCCEEEEEEEE--TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC--
T ss_pred CceEEEEEEEEcCCCCCCCceEEeecc-cccCCCccceeEEEeC--CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC--
Confidence 35677777652 3334443322211 0112223333444333 3699999988643 223456777654332110
Q ss_pred CcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC-CCCCCCeEEEEE
Q 007233 214 AGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-PGQNSLQRVVIF 292 (612)
Q Consensus 214 ~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~-~g~~~~~rf~v~ 292 (612)
...+... ........++++|+|++.|.++|......|... +.....+|... |.....+++...
T Consensus 145 --~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p~~~~~~~ 208 (290)
T 3l5i_A 145 --ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGPTVRTKKV 208 (290)
T ss_dssp --CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCCCEEEEEE
T ss_pred --CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCCeeeEeec
Confidence 0000000 012234566899999999999998654333222 33334445432 222223554444
Q ss_pred ee
Q 007233 293 GD 294 (612)
Q Consensus 293 GD 294 (612)
++
T Consensus 209 ~~ 210 (290)
T 3l5i_A 209 GK 210 (290)
T ss_dssp CS
T ss_pred cC
Confidence 43
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.86 E-value=0.16 Score=55.79 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCCCCcceeeec-CCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQ-GKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~-~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ....++++|+|....... ...-.|+|...++..+...... . ..+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~---------~---------~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE---------D---------TASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT---------S---------SCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc---------c---------CcCcee
Confidence 467888787753 345789999998653210 0123556665443322211000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p~ 280 (612)
..++++|+|+|.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 567899999999999999765445443 467777888764
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.25 Score=40.99 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=40.9
Q ss_pred CcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCC
Q 007233 169 PVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKEL 248 (612)
Q Consensus 169 p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL 248 (612)
|..+++. ..+.++++|+|....+ .-..-.|+|........ ...... ++-.-.++|+||
T Consensus 5 P~~l~v~-~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~-----------------~~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVVS-EVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTV-----------------PGSERSYDLTGL 62 (98)
T ss_dssp CEEEEEE-SCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEE-----------------ETTCSEEEECSC
T ss_pred CCceEEE-ecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEc-----------------CCCcCEEEECCC
Confidence 4444432 2347899999987643 11234567765432110 000111 111235789999
Q ss_pred CCCCEEEEEEeee
Q 007233 249 WPNAMYTYKVGHR 261 (612)
Q Consensus 249 ~P~t~Y~Yrvg~~ 261 (612)
+|+|.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999875
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=92.71 E-value=0.52 Score=39.10 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=43.0
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCC-CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGI-NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~-~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+++.- .+.++++|.|...... .-..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v~~-~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEVVA-ATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEEEE-EETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEEee-cCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 3566666532 2468999999875410 11223567765432210 000111 112246789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+||+.|.++|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998653
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=92.46 E-value=0.39 Score=41.19 Aligned_cols=74 Identities=26% Similarity=0.432 Sum_probs=43.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|....+ .-..-.|+|....+... ....+. ++-...++|
T Consensus 4 P~~P~~L~v~~-~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVVA-ATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEEE-EETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45666655532 246899999987642 12334677765433210 001111 122345789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+|.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.29 E-value=0.74 Score=45.02 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|..+++... +.++++|+|..... ....-.|+|......... ..... ++......
T Consensus 14 ~p~~P~~l~~~~~-~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILVRDV-SDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEEEec-CCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 4456777665432 35899999997641 122346777543221100 00111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|++|+|++.|.++|......|... .....|+|+|.+. ..+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCC--CceEEEecCC
Confidence 899999999999998764332211 2345677766432 2355544444
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=92.21 E-value=0.41 Score=46.07 Aligned_cols=36 Identities=14% Similarity=0.281 Sum_probs=26.4
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+++||+|+|.|.|||.....+|...-++.-.+||.
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 368999999999999997766665443445566663
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.09 E-value=0.39 Score=40.08 Aligned_cols=75 Identities=25% Similarity=0.430 Sum_probs=44.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+.+|..+++.- .+.++++|+|...... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~~-~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVVD-ATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEEE-EETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEEe-cCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 45676666542 2468999999875421 11123567765432110 000111 1223467
Q ss_pred EecCCCCCCEEEEEEeee
Q 007233 244 FLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~ 261 (612)
+|+||+|+++|.++|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999875
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.08 E-value=1.7 Score=37.60 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=56.9
Q ss_pred EeeCCCceEEEccceecccCccccEEEEEEeCC-CCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccC
Q 007233 39 YALNDNAYVKASPAVVGLKGQNSEWVTVEYSSP-NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYS 117 (612)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 117 (612)
+..++..+|++|-.-... | .+|.+.|.|.-- .-.+.||||+|--.. +||. ..+.|+-
T Consensus 29 vt~~sRSsLt~S~~~yti-G-~~q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~kn---- 86 (138)
T 2lfe_A 29 VTSESRSSLTASMYEYTL-G-QAQNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKN---- 86 (138)
T ss_dssp ----CCCEEEESCSEEET-T-CSCCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECC----
T ss_pred ecccccceeEEEeeEEEe-c-CCCcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhc----
Confidence 445677778887654432 2 235699999984 788999999997643 3332 1122211
Q ss_pred CCCcccccceEEEEEEee----cc--cceEEEEEeCCCCCcEEEEeeccccccCC
Q 007233 118 SPQYKGTGKGSLKLMLIN----QR--SDFSVALFSGGLLKPKLVAVSNKIAFTNP 166 (612)
Q Consensus 118 ~~~~~~~g~~~~~~~l~n----~r--~~~~f~~f~~~~~~~~~~a~s~~~~~~~~ 166 (612)
-+-..+=+|.+.-.+-. ++ .-.-|.++.+... .|-|.++.|+..||
T Consensus 87 -Rgvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 87 -RGVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp -TTCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred -cccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 11111223333332211 22 2467888887544 67778888876665
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.84 E-value=5.1 Score=36.81 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=19.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeec
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
...++|+||+|++.|.++|....
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 34678999999999999998754
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.75 E-value=0.43 Score=40.73 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.-.. ++++|+|......+ -..-.|+|....... ..... ++-...
T Consensus 17 ~P~~P~~l~~~~~~--~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQT--NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEECS--SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEECC--CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 35577777765543 89999998764211 012345565321100 00111 112345
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007233 243 SFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
.+|+||+|+++|.+||....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 68999999999999998753
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.59 E-value=0.31 Score=40.13 Aligned_cols=74 Identities=20% Similarity=0.344 Sum_probs=43.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+++.- .+.+++.|+|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVVA-ATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEEE-EETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45676666543 246899999987532 11234566765433210 000111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+++|.++|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.97 E-value=2.2 Score=43.47 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=51.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++.. .+.++++|+|..........-.|+|...+.... ...... .+-....+
T Consensus 186 ~~~~p~~l~~~~-~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 244 (375)
T 3t1w_A 186 AVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVV 244 (375)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEE
T ss_pred CCCCCceeEEEe-cccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEE
Confidence 344666665532 247899999997532222345666665432110 000111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+++|+|++.|.++|......|.... ....++|.|.
T Consensus 245 i~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 245 LTNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred eCCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 8999999999999987543332221 2344566554
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.26 E-value=0.53 Score=40.30 Aligned_cols=37 Identities=14% Similarity=-0.049 Sum_probs=30.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45666 99999999999876656667788888999865
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.98 E-value=0.85 Score=42.36 Aligned_cols=38 Identities=11% Similarity=-0.160 Sum_probs=27.5
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEcC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYI-WSSEYQFKAS 278 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~-~S~~~~F~T~ 278 (612)
...+|+||+|++.|.+||......|... +|+.-.++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 4567899999999999998764444444 3556666664
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.93 E-value=0.18 Score=42.29 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=43.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.- .+.+++.|+|..... .-..-.|+|....+... ..... -++-...++
T Consensus 7 ~p~~P~~l~v~~-~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALAS-ETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGP---EKSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEEE-EETTEEEEEEECCSS-CCSBBCBBCCCTTSCSC---CCCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEEe-CCCCEEEEEEeCCCC-cceEEEEEEEECCCCCc---cEEEE-----------------eCCCcCEEE
Confidence 455677666542 236899999988632 11223444543222100 00000 012235678
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007233 245 LKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~ 262 (612)
|+||+|+|.|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.68 E-value=3.9 Score=46.22 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=54.0
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCC----CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGI----NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.+|..+.+.. .+.++++|+|...... ....-.|+|............. .. +..++....
T Consensus 361 ~~P~~~~~~~-~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~---~~-------------~~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEVVE-VKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREE---VS-------------WDTENSHPQ 423 (731)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEE---EE-------------CCSSCSSCE
T ss_pred CCCceeEEEe-ccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCcccee---EE-------------EEecCCcce
Confidence 5566665432 2468999999875210 0012457776543221100000 00 001122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|.. .|....++|..
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~ 459 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDE 459 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccC
Confidence 6899999999999999876444543 47788888865
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=89.67 E-value=0.52 Score=50.39 Aligned_cols=75 Identities=21% Similarity=0.368 Sum_probs=44.6
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
..|..+|+. ..+.++++|+|..+.+..-..-.|+|.++..... ....+. ++--.+++|+
T Consensus 371 ~~~~~l~~~-~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEVV-AATPTSLLISWDASYSSSVSYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEEE-EECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEEe-ccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc---ceEEEe-----------------cCCCceEEec
Confidence 356666653 2346889999987522111234566766532110 011111 1223678999
Q ss_pred CCCCCCEEEEEEeeec
Q 007233 247 ELWPNAMYTYKVGHRL 262 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~ 262 (612)
||+|||+|..+|....
T Consensus 430 ~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 430 GLSPGVDYTITVYAYS 445 (461)
T ss_dssp SCCTTCEEEEEEEEEC
T ss_pred CCCCCCEEEEEEEEEe
Confidence 9999999999999763
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.63 E-value=0.69 Score=43.47 Aligned_cols=91 Identities=20% Similarity=0.261 Sum_probs=52.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|.-+++.... .+.+.|+|........-.-.|+|....+..+.. ... .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~----~~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTE----QSV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEE----EEE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEE----Eec------------------cCceEEE
Confidence 46778776666543 378999999864211123457787654433321 000 0123556
Q ss_pred ecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcC
Q 007233 245 LKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKAS 278 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~ 278 (612)
|.+|+|+++|..||...... ..+ .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 89999999999999987532 123 34555666653
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=89.36 E-value=0.33 Score=40.48 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=37.3
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEE
Q 007233 179 TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKV 258 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrv 258 (612)
+.++++|+|..... .-..-.|+|....+... ..... -++-.-.++|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 37899999987532 11234556655432110 00011 12334567899999999999998
Q ss_pred eee
Q 007233 259 GHR 261 (612)
Q Consensus 259 g~~ 261 (612)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.26 E-value=1 Score=48.56 Aligned_cols=143 Identities=11% Similarity=0.195 Sum_probs=76.9
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----------hcCCccEEEEeCcccccCCc------------
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----------DLKNIDIVFHIGDICYANGY------------ 342 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~----------~~~~pDfvl~~GDi~Y~~g~------------ 342 (612)
...++++++|++.+.... . ....++.+...+. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~----~--~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG----E--SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCH----H--HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCcc----c--chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 346899999999986310 0 0112233322221 12568899999999965321
Q ss_pred -------hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccce---eeecCCCCCCceEEEEE
Q 007233 343 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAET---MFYVPAENRAKFWYSTD 412 (612)
Q Consensus 343 -------~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~~Ysfd 412 (612)
..+.+++-+.+..+.+.+|+.+.|||||-... .. ....-.+|-.+-.. .+.. -.|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~---~l--PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY---TL--PQQPLHPCMFPLATAYSTLQL----VTNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS---SS--SCCCCCTTSCHHHHTSTTEEE----CCSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccc---cC--CCCCcCHHHhhhhhhcCccEE----eCCC-eEEE
Confidence 02334444555667789999999999996421 00 00000111111000 1111 1222 5699
Q ss_pred eCCEEEEEEeCCC--C---CCCCHHHHHHHHHHHhh
Q 007233 413 YGMFRFCVADTEH--D---WREGTEQYKFIEHCLAS 443 (612)
Q Consensus 413 ~G~v~fi~Ldt~~--~---~~~~~~Q~~WL~~~La~ 443 (612)
+++++|++..... + +.+...-.+.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999999875431 1 12233456788888874
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=89.05 E-value=1.1 Score=45.13 Aligned_cols=104 Identities=13% Similarity=0.224 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|.-+++.. ..+++.|+|........ -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~~--~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLSF--HNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEEE--ETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEEE--cCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 467787777753 35799999998742111 12346666543332210 0000111221000 001123567
Q ss_pred EEecCCCCCCEEEEEEeeecC------CCC-ccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLF------NST-YIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~------dg~-~~~S~~~~F~T~ 278 (612)
+.|.+|+|+++|..||..... .|. ..||+...|.+.
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 789999999999999997653 232 356666677553
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=89.00 E-value=3 Score=42.41 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.- ...+++.|+|...... .+.+ .|+|...+...+. ... ..+..
T Consensus 195 ~P~~P~~~~~~~-~~~~~~~l~w~~p~~~-~g~pi~~y~v~~~~~~~~~~~------~~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKIIE-LSQTTAKVSFNKPDSH-GGVPIHHYQVDVKEVASEIWK------IVR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSCC-TTSCEEEEEEEEEETTCSCCE------EEE---------------CSTTC
T ss_pred CCCCCcceEEee-ccCCEEEEEEeCCCCC-CCcceEEEEEEEEECCCcccE------Eee---------------ccCCc
Confidence 345565554432 2357899999854221 1223 3555544332221 000 11223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
....|++|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998764445556677888998664
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=88.80 E-value=8.5 Score=40.20 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=58.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccC
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~ 236 (612)
-|.+|..+.+.... +.+.|+|........ -.-.|+|...+ ..+... . +.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~-~--~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDA-A--ILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTC-E--EEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhe-e--eec---------------c
Confidence 56778877776544 599999998753210 01345555543 222111 0 000 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcCCCCCCCCCeEEEEE
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKASPYPGQNSLQRVVIF 292 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~p~~g~~~~~rf~v~ 292 (612)
....+.+.+.+|.|+++|..||...... +.+ .||+...|+|++.. ...+..+-.+
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~ 227 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECF 227 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEE
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEE
Confidence 1122333344999999999999976421 223 45678899998754 2233344444
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.38 E-value=1.3 Score=43.35 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=54.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|.-+.+.... .+.+.|+|........-.-.|+|....+..+.. ... .......
T Consensus 136 kP~PP~nl~v~~~~-~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~----~~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTE----QSV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEESS-SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEE----EEE------------------CSSCEEE
T ss_pred EeCCCCeEEEEECC-CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEE----Eec------------------CCceEEE
Confidence 46778777766543 378999999864211112357776544433321 000 0113456
Q ss_pred ecCCCCCCEEEEEEeeecCCC---Cc---cccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNS---TY---IWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg---~~---~~S~~~~F~T~p~ 280 (612)
|.+|+|+++|..||......+ .+ .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 799999999999999875321 22 4666678877543
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=87.06 E-value=1.1 Score=42.59 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=48.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-C----CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-N----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|.-+.+.... .+...|+|...... . .-.-.|+|...+.... . ..... ...+.
T Consensus 97 kp~PP~nl~~~~~~-~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~----~~~~~-------------~~~~~ 157 (207)
T 1iar_B 97 KPRAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-F----RIYNV-------------TYLEP 157 (207)
T ss_dssp CCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-E----EEEEE-------------CSSCC
T ss_pred ccCCCCCeEEEEcc-CCCEEEEECCCCCccccccccEEEEEEEccCCCchh-h----eeeee-------------ecCCc
Confidence 56778777766433 46899999886421 0 1124566665432211 0 00000 01234
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p~ 280 (612)
.....+.+|.||++|..||........+ .||+...|+|.+.
T Consensus 158 ~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 158 SLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp EEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred EEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 4556678999999999999987432222 4667789998754
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.04 E-value=3.7 Score=41.20 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.1
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 279 (612)
...+|.+|+|+|.|..+|.... ..|.+.+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3578999999999999998543 23455678888888854
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.73 E-value=1.9 Score=48.74 Aligned_cols=133 Identities=11% Similarity=0.042 Sum_probs=67.0
Q ss_pred EEEEEeeccc--ceEEEEEeCCCCCcEEEEeecccccc----CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEE
Q 007233 129 LKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAFT----NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFV 200 (612)
Q Consensus 129 ~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~~----~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V 200 (612)
..+.|-+++. .|.|++........ ..|..+.+. -|..|....+......++++|+|......+ -..-.|
T Consensus 422 ~~~~i~~L~p~t~Y~~~V~A~n~~G~---s~S~~~~~~T~~~~P~~p~~~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V 498 (731)
T 2v5y_A 422 PQHTITNLSPYTNVSVKLILMNPEGR---KESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEI 498 (731)
T ss_dssp CEEEECSCCSSCEEEEEEEEECSSCE---EECCCEEEECCCCCCCCCCTTTCEEEEETTEEEEECCCCSCCSSCCCEEEE
T ss_pred ceEEECCCCCCCEEEEEEEEEcCCCC---CCCceEEEEccCCCCCCCCcceEEeeecCCeEEEEEcCCCCCCCCccceEE
Confidence 3455555554 57777665322211 124444432 233333234443334679999998653211 112345
Q ss_pred EEeecCCCC-c-cccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 201 QWGRKGGDR-T-HSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 201 ~yg~~~~~~-~-~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+|...+... . .......+.. ..+.....+|+||+|+|.|.++|......|...+| ...|+|.
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s-~~~~~T~ 562 (731)
T 2v5y_A 499 TYKAVSSFDPEIDLSNQSGRVS---------------KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-TNQFTTK 562 (731)
T ss_dssp EEEEEEECC---CCCCCEEEEE---------------EETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE-EEEEECC
T ss_pred EEEECcCCCccccccCcceEEe---------------ecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc-ccEEEcC
Confidence 665432211 0 0000000000 01223467899999999999999876544544555 3678887
Q ss_pred CC
Q 007233 279 PY 280 (612)
Q Consensus 279 p~ 280 (612)
+.
T Consensus 563 ~~ 564 (731)
T 2v5y_A 563 IS 564 (731)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.33 E-value=3.1 Score=39.85 Aligned_cols=35 Identities=3% Similarity=-0.068 Sum_probs=25.0
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+++|+|++.|.|||.....-|.+.+|++..+.+++
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999999876444555677776666554
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=85.79 E-value=7 Score=40.77 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=29.9
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 279 (612)
...+|++|.|++.|..+|.... ..|.+.+|+...++|..
T Consensus 163 ~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 163 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp SEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred cEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 3577999999999999998753 13455678888888864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.12 E-value=5.7 Score=44.66 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=35.7
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC-CCCCCeEEEE
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP-GQNSLQRVVI 291 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~-g~~~~~rf~v 291 (612)
+-....+|+||+|+|.|.++|......|.+.+ ....|+|++.+ +....+++..
T Consensus 591 ~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~~l~v~~ 644 (680)
T 1zlg_A 591 SDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAHRSHLKH 644 (680)
T ss_pred CcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCCCCeEEe
Confidence 34677899999999999999986544454444 66789987542 2222355543
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=83.89 E-value=4.3 Score=44.53 Aligned_cols=42 Identities=17% Similarity=0.030 Sum_probs=30.1
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEcCCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T~p~~ 281 (612)
...++|++|+|+|.|.+||......|. ..++....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 456789999999999999986532232 224667788887643
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.36 E-value=2.6 Score=39.59 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=31.1
Q ss_pred EEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLF--NSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~--dg~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|.|..+|..... .+.+.||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986543 35567888899998763
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=82.89 E-value=4.1 Score=42.69 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=27.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCC--Cc---cccceEEEEc
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNS--TY---IWSSEYQFKA 277 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~---~~S~~~~F~T 277 (612)
..+.|.+|+|||+|..||......| .+ .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 3578999999999999999765432 23 4566677765
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=82.59 E-value=0.72 Score=36.96 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=26.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccce--EEEEcC
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T~ 278 (612)
||-.+.-+|+||+||.+|.=++-+-...| -++. +.|+|-
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g---~~EvtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYG---HQEVTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTS---CCCEEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecc---cCCceEEEEEec
Confidence 45556667999999999999988754322 2443 555553
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=81.68 E-value=2.1 Score=50.08 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=30.9
Q ss_pred EEEEecCCCCCCEEEEEEee-ecCCCC----ccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGH-RLFNST----YIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~-~~~dg~----~~~S~~~~F~T~p~ 280 (612)
...+|++|+|+|+|.|||.. ....|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 55789999999999999987 332343 46788888999763
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=81.46 E-value=2.7 Score=46.54 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.-. +.++++|+|..+... .+ .-.||+...++..|...+. . ++ .
T Consensus 9 ~P~pP~~P~v~~~-~~~sv~L~W~~P~~D-Ggs~I~~Y~vE~~~~~~~~W~~v~~-~-----------------~~--t- 65 (573)
T 3uto_A 9 EPEPPRFPIIENI-LDEAVILSWKPPALD-GGSLVTNYTIEKREAMGGSWSPCAK-S-----------------RY--T- 65 (573)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSCC-SSSCCCEEEEEEEESSSCCCEEEEE-E-----------------SS--S-
T ss_pred CCccCCCCEEEEe-eCCEEEEEECCCCcC-CCCcccEEEEEEEECCCCceEEecc-c-----------------cC--C-
Confidence 3566776654322 358999999976321 12 2456777766666643221 0 01 1
Q ss_pred EEEEecCCCCCCEEEEEEeee
Q 007233 241 HTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
..+++||.||++|.|||...
T Consensus 66 -~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 66 -YTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp -EEEECCCCTTCEEEEEEEEE
T ss_pred -EEEeCCCCCCCcEeEEEEEE
Confidence 24689999999999999975
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.42 E-value=1.4 Score=42.33 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=28.2
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++++|+|++.|.|||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999876444555667777887754
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=80.84 E-value=0.89 Score=53.25 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=32.1
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
.++|++|+|| +|.+||......|.+.||+...|+|++.+..
T Consensus 852 ~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~~ 892 (897)
T 2dtg_E 852 GCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLDV 892 (897)
T ss_dssp CCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC--
T ss_pred cEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCCC
Confidence 3478999999 6999998765566667899999999886543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 612 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 9e-60 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-24 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 5e-17 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 7e-17 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 5e-06 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 7e-05 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.003 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 199 bits (507), Expect = 9e-60
Identities = 67/324 (20%), Positives = 118/324 (36%), Gaps = 31/324 (9%)
Query: 281 PGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN 340
G + + GD+G+ + S T K V +GD+ YA+
Sbjct: 2 TGLDVPYTFGLIGDLGQS------------FDSNTTLSHYELSPKKGQTVLFVGDLSYAD 49
Query: 341 GYIS----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETM 396
Y + +WD + E + P++ +GNHE ++ + +
Sbjct: 50 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY----RYHV 105
Query: 397 FYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLA 456
Y +++ + FWYS V + + GT QY +++ L V R + PWLI L
Sbjct: 106 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 165
Query: 457 HRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN 516
H L Y+S R + + KYKVD+ GHVH YER+ +
Sbjct: 166 HSPL-YNSY----NHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKI 220
Query: 517 KE-KNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNL 572
+ +++ G G + Q +S +R+ +G + ++
Sbjct: 221 TNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHA 280
Query: 573 LFEYKKSSDGKVY--DSFRISRDY 594
F + ++ DG DS +
Sbjct: 281 HFSWNRNQDGVAVEADSVWFFNRH 304
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 102 bits (253), Expect = 1e-24
Identities = 53/320 (16%), Positives = 88/320 (27%), Gaps = 40/320 (12%)
Query: 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD 347
R V GD G + + + A+ ++ L D + +GD Y G D
Sbjct: 6 RFVAVGDWG--GVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKD 62
Query: 348 -QFTAQIE-----PIASTVPYMIASGNHERDW-PGTGSFYGNKDSGGECGVLAETM-FYV 399
+F E P VP+ + +GNH+ Y + F +
Sbjct: 63 KRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKI 122
Query: 400 PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRV 459
P N + + D D E LA + +Q V
Sbjct: 123 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYV 179
Query: 460 LGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 519
L +++ + L L +KV + GH HN +
Sbjct: 180 LVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDE---------- 229
Query: 520 NYYKGTLNGTIHVVAGGGGAGLAEFTPLQTT-------WSLYRDYDYGFVKLTAFDHSNL 572
NG V++G G L+ + GF + +
Sbjct: 230 -------NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE-ITPKEM 281
Query: 573 LFEYKKSSDGKVYDSFRISR 592
Y + GK ++ R
Sbjct: 282 SVTY-IEASGKSLFKTKLPR 300
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 75.0 bits (184), Expect = 5e-17
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 22/122 (18%)
Query: 162 AFTNP---NAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTL 217
F P NAP + QG M ++W + + V++ + R G +
Sbjct: 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP--GSSAVRYWSEKNGRKRIAKGKM 66
Query: 218 TFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277
+ G+IH + +++L N Y Y+VG + + F
Sbjct: 67 S----------TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVG------LRNTTRRFSFIT 110
Query: 278 SP 279
P
Sbjct: 111 PP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 74.6 bits (183), Expect = 7e-17
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 18/116 (15%)
Query: 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGS 223
NAP + QG + ++WT+ Y V + + GT+
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSKSQKRAMGTVV----- 74
Query: 224 MCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279
+IH +K+L + Y Y++G ++ F P
Sbjct: 75 -----TYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPP 119
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 46.7 bits (109), Expect = 5e-06
Identities = 31/227 (13%), Positives = 56/227 (24%), Gaps = 20/227 (8%)
Query: 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 348
VV GD+ DG N D +L+T + Y S
Sbjct: 53 VVQLGDI----IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSS 108
Query: 349 FTAQIEPIASTVPYMIASGNHER----DWPGTGSFYGNKDSGGECG------VLAETMFY 398
+ + + + P + G +
Sbjct: 109 RLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRI 168
Query: 399 VPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHR 458
+ N + + + +Q ++++ L D +++ LIF
Sbjct: 169 LTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLP 228
Query: 459 VLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505
V ++ D L L V I GH H+ R
Sbjct: 229 VHPCAA------DPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR 269
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 43.9 bits (102), Expect = 2e-05
Identities = 20/193 (10%), Positives = 42/193 (21%), Gaps = 21/193 (10%)
Query: 312 ASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNH 369
L + ++ D + IG++ + F + Y+ G
Sbjct: 16 GDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVP--GPQ 73
Query: 370 ER-DWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWR 428
+ W + E + ET + +
Sbjct: 74 DAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEP------EEHE 127
Query: 429 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 488
E+ L ++ K IFL H G + L +
Sbjct: 128 ALRYPAWVAEYRLKALWELKDYPKIFLFH----------TMPYHKGLNEQGSHEVAHLIK 177
Query: 489 KYKVDIAIYGHVH 501
+ + +
Sbjct: 178 THNPLLVLVAGKG 190
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 42.8 bits (99), Expect = 7e-05
Identities = 26/209 (12%), Positives = 49/209 (23%), Gaps = 19/209 (9%)
Query: 298 DEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIA 357
+ + D A+ + QL + D V GDI G ++ + +
Sbjct: 13 SRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSLN 71
Query: 358 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFR 417
P + GNH+ + + + + D R
Sbjct: 72 --YPLYLIPGNHDDKALFLEYL--------------QPLCPQLGSDANNMRCAVDDFATR 115
Query: 418 FCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEP 477
D+ L + + + G A
Sbjct: 116 LLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQ--MDPIACE 173
Query: 478 MGRESLQKLWQKYKVDIAIYGHVHNYERT 506
G L + + + GH H+ T
Sbjct: 174 NGHRLLALVERFPSLTRIFCGHNHSLTMT 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.8 bits (86), Expect = 0.003
Identities = 24/213 (11%), Positives = 57/213 (26%), Gaps = 26/213 (12%)
Query: 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 348
+V+ G++ EY A R++I + ++ I D+
Sbjct: 33 LVVVGNIL-KNEALEKEYERAHLARREPNRKVIHENEHYIIETL--------------DK 77
Query: 349 FTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFW 408
F +I + V + G ++ F + A R +F
Sbjct: 78 FFREIGEL--GVKTFVVPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFE 132
Query: 409 YSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY 468
G+ + + + ++I + + ++ + + +
Sbjct: 133 VIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRL---VTIFYTPP--IGEFVD 187
Query: 469 AVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 501
+ ++AI GHV
Sbjct: 188 RTPEDPKHHGSAVVNTIIK-SLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.98 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.84 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.81 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.78 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.58 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.56 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.12 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.08 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.0 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.92 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.8 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.71 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.4 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.14 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.02 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.64 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.48 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.46 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.45 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.36 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.34 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.34 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.3 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.29 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.29 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.29 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.29 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.28 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.23 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.22 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.2 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.16 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.11 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.1 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.06 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 97.0 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.96 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.95 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.94 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.94 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.83 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.78 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.78 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.78 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.75 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.7 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.67 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.67 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.65 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.63 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.58 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.58 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.55 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.54 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.51 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.48 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.48 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.46 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.44 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.32 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.31 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.31 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.3 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.19 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.13 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.11 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.11 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.1 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.09 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.06 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.05 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.03 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.03 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.02 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.01 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 95.98 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.97 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.96 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 95.93 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.93 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.91 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.91 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.86 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.84 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.82 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.81 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.71 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.69 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.67 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.59 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.57 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 95.48 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.22 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 95.11 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.08 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 94.96 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.94 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.7 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 92.99 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.97 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 92.7 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.6 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 91.54 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 89.48 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 87.7 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 87.01 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 86.21 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 84.75 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 84.03 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 83.03 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=7.2e-55 Score=453.13 Aligned_cols=289 Identities=25% Similarity=0.391 Sum_probs=238.4
Q ss_pred CCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCc----hhHHHHHHHhhhhhh
Q 007233 282 GQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIA 357 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~ 357 (612)
|++.++||+++||+|... ....++..+.....+||||||+||++|+++. ..+||+|++.++++.
T Consensus 3 g~~~p~~F~v~GD~g~~~------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp CSSCCEEEEEECSCCSBH------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCC------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHh
Confidence 456789999999998642 2344555555555789999999999997764 568999999999999
Q ss_pred cCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHH
Q 007233 358 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQY 434 (612)
Q Consensus 358 s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~ 434 (612)
+.+|+|+++||||+++.. .....++..++..+|.||.+ ...+.||+|++|++|||+||++..+..+++|+
T Consensus 71 ~~~P~~~~~GNHD~~~~~-------~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~ 143 (312)
T d2qfra2 71 AYQPWIWTAGNHEIEFAP-------EINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQY 143 (312)
T ss_dssp TTSCEEECCCGGGTCCBG-------GGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHH
T ss_pred hcceEEEecccccccccc-------cccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHH
Confidence 999999999999986421 11233455677889999964 34577999999999999999998888889999
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeccccccee
Q 007233 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNIC 514 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~ 514 (612)
+||+++|++++|+++||+||++|+|+ |++...... ..+.+ |+.|++||++++|||+|+||+|.|||++|++++++
T Consensus 144 ~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~---~~~~~-r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~ 218 (312)
T d2qfra2 144 TWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFM---EGEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 218 (312)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECSSCS-SCCBSTTTT---TTHHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHHHHHHhhcCCCEEEEEccccc-cccCCCCcc---cchhH-HHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcc
Confidence 99999999998889999999999999 877543221 12344 89999999999999999999999999999999887
Q ss_pred ccCC-CccccCCCCceEEEEeCCCCCC---CCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEE--EEE
Q 007233 515 TNKE-KNYYKGTLNGTIHVVAGGGGAG---LAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVY--DSF 588 (612)
Q Consensus 515 ~~~~-~~~y~~~~~g~vyiv~G~gG~~---l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~--D~f 588 (612)
.... ......+++||||||+|+||+. ...+..++|.|+++++.+|||.+|+++|+++|.++|+++.||+++ |+|
T Consensus 219 ~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~ 298 (312)
T d2qfra2 219 KITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 298 (312)
T ss_dssp CSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEE
T ss_pred cccCCccccccCCCcCEEEEECcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEE
Confidence 5432 2232336789999999999953 345566788999999999999999999999999999999999987 999
Q ss_pred EEEeCC
Q 007233 589 RISRDY 594 (612)
Q Consensus 589 ~i~k~~ 594 (612)
||.|++
T Consensus 299 ~i~~~~ 304 (312)
T d2qfra2 299 WFFNRH 304 (312)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999986
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.98 E-value=8.4e-33 Score=281.33 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=174.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch----hHHHHHHHhh--hhhhcC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWDQFTAQI--EPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~----~~wd~f~~~i--~~l~s~ 359 (612)
.+||+++||+|......... ..+......+.+.+++ .+|||||++||++|.+|.. .+|.++++.+ ......
T Consensus 4 ~~~F~vigD~g~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 80 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred CeEEEEEecCCCCCCccccc--HHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcC
Confidence 59999999998665432111 0011111222333332 5899999999999987753 3444444332 223458
Q ss_pred CCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEe------CCEEEEEEeCCCC-------
Q 007233 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY------GMFRFCVADTEHD------- 426 (612)
Q Consensus 360 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~------- 426 (612)
+|+|+++||||+...... .+.......++.+|. .||++.+ +.++|+++|+...
T Consensus 81 ~P~~~~~GNHD~~~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~ 146 (302)
T d1utea_ 81 VPWHVLAGNHDHLGNVSA---------QIAYSKISKRWNFPS-----PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDF 146 (302)
T ss_dssp CCEEECCCHHHHHSCHHH---------HHHGGGTSTTEECCS-----SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGS
T ss_pred CceEEeeccccccccccc---------ccchhhccccccCCC-----cccceeecccCCCCcEEEEEccceeEeeccccc
Confidence 999999999997532110 000011123344442 2466654 3699999997420
Q ss_pred ----------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEE
Q 007233 427 ----------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAI 496 (612)
Q Consensus 427 ----------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdlvl 496 (612)
...+.+|++||++.|++ .+.+|+|++.|+|+ |+...+ +. .... +..|++||++++|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~-~~~~~~----~~-~~~~-~~~~~~ll~~~~v~~~~ 216 (302)
T d1utea_ 147 VSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPV-WSIAEH----GP-THCL-VKQLLPLLTTHKVTAYL 216 (302)
T ss_dssp TTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCS-SCCSSS----CC-CHHH-HHHTHHHHHHTTCSEEE
T ss_pred ccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccc-cccCCC----CC-chhh-hhhhhHHHHhcCceEEE
Confidence 01247899999999998 46789999999998 776432 11 1233 78999999999999999
Q ss_pred ecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC------CCCCcc-eeeeCceeEEEEEEecC
Q 007233 497 YGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP------LQTTWS-LYRDYDYGFVKLTAFDH 569 (612)
Q Consensus 497 sGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~------~~~~ws-~~~~~~~Gy~~l~v~n~ 569 (612)
+||+|.|+|+.+ .+++.||++|+||........ ..+.|. ......+||++++| +.
T Consensus 217 ~GH~H~~~r~~~-----------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~ 278 (302)
T d1utea_ 217 CGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TP 278 (302)
T ss_dssp ECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CS
T ss_pred eCCCcceEEEec-----------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-EC
Confidence 999999999863 367899999988865322111 111121 12245789999999 78
Q ss_pred CeEEEEEEECCCCcEEEEEEEEeC
Q 007233 570 SNLLFEYKKSSDGKVYDSFRISRD 593 (612)
Q Consensus 570 ~~l~~~~~~~~dG~v~D~f~i~k~ 593 (612)
++|+++|+ +.+|+++|+++|.|.
T Consensus 279 ~~l~~~~~-~~~G~~~~~~~~~~~ 301 (302)
T d1utea_ 279 KEMSVTYI-EASGKSLFKTKLPRR 301 (302)
T ss_dssp SCEEEEEE-ETTSCEEEEEEECCC
T ss_pred CEEEEEEE-eCCCCEEEEEEecCC
Confidence 99999998 689999999999874
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=3.5e-22 Score=199.17 Aligned_cols=244 Identities=17% Similarity=0.125 Sum_probs=143.9
Q ss_pred CeEEEEEeecCCCCCCCCCccccccc-c-hHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhc--CCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQY-A-SLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~-~-~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s--~vP 361 (612)
.+||+.++|+|...... ..+..... . ....++.+.+...+|||||++||++ ..|...+|+.+.+.++++.+ .+|
T Consensus 4 ~~~i~~iSD~Hl~~~~~-~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~-~~g~~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDR-RLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp SEEEEEECCCCBC-----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCB-SSCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEEeeCccCCCCc-ccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCC-CCCChhHHHHHHHHhhhhhhhcCCC
Confidence 59999999999865321 11211111 0 1123344433346899999999999 45667778888887776543 689
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHH
Q 007233 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFI 437 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL 437 (612)
+++++||||.... + ...+..........+|+++.++++|++|||.... ....+|++||
T Consensus 82 ~~~v~GNHD~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl 143 (256)
T d2hy1a1 82 LVWVMGNHDDRAE-----L-------------RKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143 (256)
T ss_dssp EEECCCTTSCHHH-----H-------------HHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHH
T ss_pred EEEEcccccchhh-----h-------------hhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHH
Confidence 9999999995310 0 0011011112234457899999999999987542 2357899999
Q ss_pred HHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccC
Q 007233 438 EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK 517 (612)
Q Consensus 438 ~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~ 517 (612)
++.|++. +..++||++|+|+ +............ . .++.+..++++++|+++|+||.|...+..
T Consensus 144 ~~~L~~~---~~~~~iv~~Hhpp-~~~~~~~~~~~~~--~-~~~~~~~i~~~~~v~~~~~GH~H~~~~~~---------- 206 (256)
T d2hy1a1 144 AEELATP---APDGTILALHHPP-IPSVLDMAVTVEL--R-DQAALGRVLRGTDVRAILAGHLHYSTNAT---------- 206 (256)
T ss_dssp HHHHTSC---CTTCEEEECSSCS-SCCSSHHHHTTSB--C-CHHHHHHHHTTSSEEEEEECSSSSCEEEE----------
T ss_pred HHHHHhh---hccCceeeeecCC-ccccccccccccc--c-cHHHHHHHHhccCceEEEccccchhhceE----------
Confidence 9999874 3334788899998 5543221111111 1 16788999999999999999999765431
Q ss_pred CCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 518 EKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 518 ~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
.+|..++++|+.... .++. ..+.-........||..|++ .++.+.++++
T Consensus 207 --------~~gi~~~~~~s~~~~-~~~~-~~~~~~~~~~~~~g~~lv~v-~~d~~~~~~i 255 (256)
T d2hy1a1 207 --------FVGIPVSVASATCYT-QDLT-VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVI 255 (256)
T ss_dssp --------ETTEEEEECCCCC---------------------CEEEEEE-CSSCEEEEEE
T ss_pred --------ECCEEEEEcCCcccc-cccc-CCCCCcccccCCCCEEEEEE-ECCCEEEEeC
Confidence 246667776553221 1111 01111122345678999988 4556655543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.84 E-value=6.3e-20 Score=184.59 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=123.4
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
.||+.++|+|...... ..+... .....++++.+.+...+||+|+++||+++ .+...+|+.+.+.++.+ .+|+++
T Consensus 1 M~i~hiSD~Hl~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~~~ 76 (271)
T d3d03a1 1 MLLAHISDTHFRSRGE-KLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPLYL 76 (271)
T ss_dssp CEEEEECCCCBCSTTC-CBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCEEE
T ss_pred CEEEEEecCcCCCCcc-ccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCEEE
Confidence 4799999999865421 111111 11111233333332357999999999995 55667777777777765 689999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHHH
Q 007233 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEHC 440 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~~ 440 (612)
++||||...... .++ ...+...........|.++.++++||+|||.... ....+|++||+++
T Consensus 77 i~GNHD~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 77 IPGNHDDKALFL-EYL-------------QPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp ECCTTSCHHHHH-HHH-------------GGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EecCccchHHHH-HHh-------------hhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 999999741100 000 0000000111233457788899999999997543 2358999999999
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceee
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERT 506 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~ 506 (612)
|++. ++.+ +|+++|||+ +........... .. ..++|.++++++ +|+++|+||.|.....
T Consensus 143 L~~~--~~~~-~iv~~Hh~p-~~~~~~~~d~~~--~~-~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 143 LFEG--GDKP-ATIFMHHPP-LPLGNAQMDPIA--CE-NGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHH--TTSC-EEEEESSCS-SCCSCTTTGGGS--BT-TTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred Hhhh--ccce-eEEEeccCc-cccCcccccccc--cc-chHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 9985 3444 677788887 544321111111 11 156899999998 6999999999986554
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=7.1e-20 Score=183.90 Aligned_cols=248 Identities=15% Similarity=0.150 Sum_probs=147.4
Q ss_pred CeEEEEEeecCCCCCCCCCc----ccccccchHHHHHHHHHh--cCCccEEEEeCcccccC-----CchhHHHHHHHhhh
Q 007233 286 LQRVVIFGDMGKDEADGSNE----YNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYAN-----GYISQWDQFTAQIE 354 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~----~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~-----g~~~~wd~f~~~i~ 354 (612)
.|||++++|+|.+....... ..++...+...+++++++ ..+|||||++||+++.. .....|+.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 49999999999874321111 111112234455555443 36899999999999542 12233444444444
Q ss_pred hhhcCCCeEEcCCCCccCCCCCCC-CCCCCCCCCcccccc-ceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC------
Q 007233 355 PIASTVPYMIASGNHERDWPGTGS-FYGNKDSGGECGVLA-ETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------ 426 (612)
Q Consensus 355 ~l~s~vP~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~-~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------ 426 (612)
.+ .+|++.++||||........ ............... ...+ .......+.+..++++|+.+++...
T Consensus 83 ~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 83 AC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLI----GDDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp TT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECG----GGTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hc--CCCEEEecccCccccccchhcccccccchhhhccccccccc----CCCCccceeecCCCeEEEEecCccccccccc
Confidence 32 79999999999975211000 000000000000000 0001 1123345678889999999987421
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCc
Q 007233 427 ----------------------------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI 466 (612)
Q Consensus 427 ----------------------------------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~ 466 (612)
...+.+|++||+++|+++.+ +..++|+++|+|+ +....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~-~~~~~ 234 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV-HPCAA 234 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC-CTTSS
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCC-ccCCC
Confidence 01247899999999998653 3456999999998 54432
Q ss_pred cccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC
Q 007233 467 FYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
... . ... ..+++.++|.++ +|+++|+||.|.+++.. ..+|..||+.|+....
T Consensus 235 ~~~--~--~~~-~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-----------------~~~g~~~i~~~~~~~~----- 287 (320)
T d2nxfa1 235 DPI--C--LAW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-----------------DSSGAQHITLEGVIET----- 287 (320)
T ss_dssp CGG--G--SCT-THHHHHHHHHTCTTEEEEEECSCTTCEEEE-----------------CTTSCEEEECCCGGGC-----
T ss_pred CCc--c--chh-hHHHHHHHHHhCCCeeEEEeCCcCCcCeee-----------------ccCCCEEEECCeeecC-----
Confidence 111 1 111 267899999998 59999999999887543 1357788887653211
Q ss_pred CCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 546 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
.....+|..+++ .+.+|.++-..
T Consensus 288 ---------~~~~~~~~~~~v-~~d~~~~~~~~ 310 (320)
T d2nxfa1 288 ---------PPHSHAFATAYL-YEDRMVMKGRG 310 (320)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCCEEEEEE-ECCEEEEEEec
Confidence 123458888998 56788887653
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.81 E-value=6.7e-20 Score=159.75 Aligned_cols=99 Identities=25% Similarity=0.428 Sum_probs=77.9
Q ss_pred cccCC---CCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCccceeccC
Q 007233 162 AFTNP---NAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRD 236 (612)
Q Consensus 162 ~~~~~---~~p~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mcg~pa~~~g~~~ 236 (612)
.|.+| ++|+||||+++++ .++|+|+|+|... ...+.|+||.+++.....+.+. .+|. .++.+
T Consensus 9 ~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~--~~~~~V~yg~~~~~~~~~a~~~~~~~~-----------~~~~~ 75 (112)
T d2qfra1 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYR-----------FFNYS 75 (112)
T ss_dssp GGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCEEEEEESSSCCCEEEECEEECCB-----------CSSCB
T ss_pred cccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC--CCCcEEEEEECCCCCCcEEEEEEEEEE-----------ecccC
Confidence 46666 7899999999986 6999999999753 4679999999877654433222 2221 23446
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+++|+|+|+||+|||+|+||||++ .||++++|+|+|
T Consensus 76 ~~~~h~v~Lt~L~P~T~Y~YrVG~~------~~S~~~~F~T~P 112 (112)
T d2qfra1 76 SGFIHHTTIRKLKYNTKYYYEVGLR------NTTRRFSFITPP 112 (112)
T ss_dssp CCEEEEEEECSCCTTCEEEEEECCS------SSCEEEEEECCC
T ss_pred CcEEEEEEECCCCCCCEEEEEECCC------CceeeEEEEcCC
Confidence 7899999999999999999999852 489999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.78 E-value=3e-19 Score=157.31 Aligned_cols=97 Identities=20% Similarity=0.342 Sum_probs=76.3
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCcccc-CcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSP-AGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
+.++|+|+||+++++ .++|+|+|+|..+. .+.+.|+||..++.....+ +.+.+|.... ...+|+|+
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~-~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~-----------~~~~~~H~ 88 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK-AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIHH 88 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC-TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCC-CCCCEEEEcCCCCCCccEEEEEEEEeeccc-----------ccCCeEEE
Confidence 447999999999986 79999999996542 3568999999877665443 3334443322 23679999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~------~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCG------GGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEeCCC
Confidence 9999999999999999863 489999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.58 E-value=6e-15 Score=141.72 Aligned_cols=175 Identities=13% Similarity=0.107 Sum_probs=108.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
-+|+++||.|.+ ++.++++++.. .++|+|+++||++.......++..+++.+..+ .+|+++
T Consensus 6 ~~i~~~sd~hg~---------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~ 68 (228)
T d1uf3a_ 6 RYILATSNPMGD---------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred cEEEEEeCCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEE
Confidence 478899999854 34455554431 57999999999996555555666666666554 789999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC----------CCCCHHHH
Q 007233 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WREGTEQY 434 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~~~~~Q~ 434 (612)
++||||...... +. .........+........+.+..+++.++.++.... .....+|.
T Consensus 69 i~GNHD~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 69 VPGPQDAPIWEY---LR---------EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp ECCTTSCSHHHH---HH---------HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred EecCCCchhhhh---hh---------hhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 999999631000 00 000000000000000011446677788877764321 11246889
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007233 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
+|+++.++.. ...+.|+++|.|+ +..... . .+.+.+.+++++++++++++||+|..
T Consensus 137 ~~l~~~l~~~---~~~~~il~~H~p~-~~~~~~--~-------~~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 137 EYRLKALWEL---KDYPKIFLFHTMP-YHKGLN--E-------QGSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHGGGGGS---CSCCEEEEESSCB-CBTTTB--T-------TSBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHhhc---cCCceEEEEeeec-cCcccc--c-------cccHHHHHHHHhcCCcEEEEcccccc
Confidence 9999988874 2334788999998 543211 0 11346788899999999999999974
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.56 E-value=1.4e-14 Score=141.26 Aligned_cols=188 Identities=13% Similarity=0.088 Sum_probs=101.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHH----------------
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQF---------------- 349 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f---------------- 349 (612)
+.||++++|.|... ..++.+..++++ .+||+||++||+++......+|...
T Consensus 2 ~~ri~~isD~h~~~------------~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (257)
T d2yvta1 2 PRKVLAIKNFKERF------------DLLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 68 (257)
T ss_dssp CCEEEEEECCTTCG------------GGHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred CcEEEEEeCCCCCH------------HHHHHHHHHHhh-cCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeecccc
Confidence 47999999999532 224444445554 6899999999999643222222211
Q ss_pred -------HHhhhhhhc-CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEE
Q 007233 350 -------TAQIEPIAS-TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVA 421 (612)
Q Consensus 350 -------~~~i~~l~s-~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~L 421 (612)
...++.+.. .+|++.++||||...... .. ..+......+..........+..+++.|+.+
T Consensus 69 n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (257)
T d2yvta1 69 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIF--LR----------AAYEAETAYPNIRVLHEGFAGWRGEFEVIGF 136 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHH--HH----------HHHHTTTTCTTEEECSSEEEEETTTEEEEEE
T ss_pred ccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhHH--HH----------HhccccccccccccccceeEEecCCeEEEEe
Confidence 111222222 689999999999631000 00 0000000000000011123344567777776
Q ss_pred eCCCCC-------C--CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCC
Q 007233 422 DTEHDW-------R--EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV 492 (612)
Q Consensus 422 dt~~~~-------~--~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~V 492 (612)
+..... . ....+.+|++..++. .+....|+++|+|+ +.+....... .....+.+.+.++++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp-~~~~~~~~~~--~~~~~g~~~l~~~l~~~~~ 210 (257)
T d2yvta1 137 GGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPP-IGEFVDRTPE--DPKHHGSAVVNTIIKSLNP 210 (257)
T ss_dssp CSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCC-SCSSTTCBTT--BSCCCSCHHHHHHHHHHCC
T ss_pred ccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEcccc-cccccccccc--chhhhhhHHHHHhhhhcCC
Confidence 543211 0 123344555555554 34456899999998 5442211111 1112235689999999999
Q ss_pred eEEEecCcccce
Q 007233 493 DIAIYGHVHNYE 504 (612)
Q Consensus 493 dlvlsGH~H~Ye 504 (612)
+++++||.|...
T Consensus 211 ~~~~~GHiH~~~ 222 (257)
T d2yvta1 211 EVAIVGHVGKGH 222 (257)
T ss_dssp SEEEECSSCCEE
T ss_pred cEEEEEeecCCe
Confidence 999999999743
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.12 E-value=4.3e-09 Score=99.25 Aligned_cols=178 Identities=20% Similarity=0.327 Sum_probs=104.8
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCC
Q 007233 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GN 368 (612)
|+++||+|...+... . ...+.++++. .++|.|+|+||++.. +..+.++.+ .-+++.+.||
T Consensus 6 IlviSD~H~~~~~~~-----l----~~~~~~~~~~-~~vD~ii~~GDi~~~--------~~l~~l~~l--~~~v~~V~GN 65 (193)
T d2a22a1 6 VLLIGDLKIPYGAKE-----L----PSNFRELLAT-DKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVSGD 65 (193)
T ss_dssp EEEECCCCTTTTCSS-----C----CGGGHHHHHC-TTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECCCT
T ss_pred EEEEeCCCCCcccch-----h----hHHHHHHhcc-CCCCEEEECCCCCCH--------HHHHHHHhh--CCCEEEEcCC
Confidence 899999997533110 0 1234555543 689999999999831 233344433 3468899999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007233 369 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~ 448 (612)
||........ .+.. .+| ..-.+.+++
T Consensus 66 ~D~~~~~~~~-------------~~~~--~lp------~~~~~~~~~--------------------------------- 91 (193)
T d2a22a1 66 LDSAIFNPDP-------------ESNG--VFP------EYVVVQIGE--------------------------------- 91 (193)
T ss_dssp TCCSCCBCCG-------------GGTB--CCC------SEEEEEETT---------------------------------
T ss_pred CCcchhhhhH-------------HHHh--hCC------ccEEEEECC---------------------------------
Confidence 9975321100 0000 111 112233333
Q ss_pred CCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCc
Q 007233 449 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNG 528 (612)
Q Consensus 449 ~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g 528 (612)
+.|.+.|... +.. + . + .+.+..++.+.++|++++||+|...... .++
T Consensus 92 --~~i~l~H~~~-~~~--~----~---~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~------------------~~g 138 (193)
T d2a22a1 92 --FKIGLMHGNQ-VLP--W----D---D---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------KNG 138 (193)
T ss_dssp --EEEEEECSTT-SSS--T----T---C---HHHHHHHHHHHTCSEEEECSSCCCEEEE------------------ETT
T ss_pred --EEEEEEeccC-CCC--C----C---C---HHHHHHHHhhcCCCEEEEcCccCceEEE------------------ECC
Confidence 3455556432 211 0 0 1 4577888889999999999999854321 256
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc
Q 007233 529 TIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 583 (612)
Q Consensus 529 ~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 583 (612)
+++|-.|+.|.+..... . +....|+.+++ ++..++++++.-.+|+
T Consensus 139 ~~~iNPGSvg~pr~~~~---~------~~~~syaild~-~~~~v~v~~y~l~~~~ 183 (193)
T d2a22a1 139 KLFLNPGTATGAFSALT---P------DAPPSFMLMAL-QGNKVVLYVYDLRDGK 183 (193)
T ss_dssp EEEEECCCSSCCCCTTS---T------TCCCEEEEEEE-ETTEEEEEEEEEETTE
T ss_pred EEEEECCCCCcCcCCCC---C------CCCCEEEEEEE-ECCEEEEEEEEecCCe
Confidence 77777888775432111 0 22347999998 7889999888655554
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=6.6e-09 Score=97.04 Aligned_cols=180 Identities=17% Similarity=0.253 Sum_probs=107.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|++++||+|.+..... . ...+.++++. .++|.|+|+||++. .+-.+.++.+ ..|++.+.
T Consensus 1 MkI~viSD~H~~~~~~~-----l----~~~~~~~~~~-~~~D~Ii~~GDi~~--------~e~l~~l~~~--~~~v~~V~ 60 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNS-----L----PAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 60 (182)
T ss_dssp CEEEEECCCCBTTTCSS-----C----CHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred CEEEEEeecCCCCcchh-----h----HHHHHHHhcc-cCCCEEEEccCccc--------hhhHHHHHhh--CCceEEEe
Confidence 48999999997543110 0 1223333332 47999999999982 1223334333 34789999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007233 367 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r 446 (612)
||||.... +|. .-.+++++
T Consensus 61 GN~D~~~~------------------------~p~------~~~~~~~g------------------------------- 79 (182)
T d1z2wa1 61 GDFDENLN------------------------YPE------QKVVTVGQ------------------------------- 79 (182)
T ss_dssp CTTCCCTT------------------------SCS------EEEEEETT-------------------------------
T ss_pred CCcCcccc------------------------cce------EEEEEEcC-------------------------------
Confidence 99996420 110 01122221
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCC
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 526 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~ 526 (612)
+.|.+.|.+. +... . . .+.+..++++.++|++|+||+|...-.. .
T Consensus 80 ----~~i~~~Hg~~-~~~~------~---~---~~~l~~~~~~~~~divi~GHTH~p~~~~------------------~ 124 (182)
T d1z2wa1 80 ----FKIGLIHGHQ-VIPW------G---D---MASLALLQRQFDVDILISGHTHKFEAFE------------------H 124 (182)
T ss_dssp ----EEEEEECSCC-CCBT------T---C---HHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred ----cEEEEEeCCC-CCCC------C---C---HHHHHHHHhccCCCEEEECCcCcceEEE------------------E
Confidence 3466667654 3221 1 0 4567778888899999999999854321 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007233 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 592 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 592 (612)
+++.+|-.|+.|.+...... +....|+.+++ ++..+++..+.-.+++ .+++++..|
T Consensus 125 ~~~~~iNPGSv~~pr~~~~~---------~~~~syaild~-~~~~v~~~~~~l~~~~v~~~~~~~~~ 181 (182)
T d1z2wa1 125 ENKFYINPGSATGAYNALET---------NIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 181 (182)
T ss_dssp TTEEEEECCCTTCCCCSSCS---------CCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEeCCCCCCCCCCCCC---------CCCCEEEEEEE-eCCEEEEEEEEecCCcEEEEEEEEEc
Confidence 56788888887764322110 12336889998 7788888777544555 366677666
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.00 E-value=1.9e-08 Score=93.05 Aligned_cols=161 Identities=19% Similarity=0.219 Sum_probs=102.8
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
..||++++|+|.+ ...++++++. ..++|.|+|+||+.+..... + ..|+..
T Consensus 3 ~~kI~viSD~Hgn---------------~~al~~vl~~~~~~~D~iih~GD~~~~~~~~------------~--~~~~~~ 53 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELRPDSP------------L--WEGIRV 53 (173)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSCTTCG------------G--GTTEEE
T ss_pred CCEEEEEeccCCC---------------HHHHHHHHHHhhcCCCEEEECCcccCcccch------------h--hcCCeE
Confidence 3799999999953 2345555543 35799999999998543221 1 237889
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007233 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 444 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~ 444 (612)
+.||||.... .|. ...+++++
T Consensus 54 V~GN~D~~~~------------------------~~~------~~~~~~~~----------------------------- 74 (173)
T d3ck2a1 54 VKGNMDFYAG------------------------YPE------RLVTELGS----------------------------- 74 (173)
T ss_dssp CCCTTCCSTT------------------------CCS------EEEEEETT-----------------------------
T ss_pred EecCcccccc------------------------cce------EEEEEECC-----------------------------
Confidence 9999997410 010 11223332
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccC
Q 007233 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKG 524 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~ 524 (612)
..|++.|... |... . . .+.+..++.+.++|++|+||+|......
T Consensus 75 ------~~~~~~Hg~~-~~~~------~---~---~~~l~~~~~~~~~dvvi~GHTH~p~~~~----------------- 118 (173)
T d3ck2a1 75 ------TKIIQTHGHL-FDIN------F---N---FQKLDYWAQEEEAAICLYGHLHVPSAWL----------------- 118 (173)
T ss_dssp ------EEEEEECSGG-GTTT------T---C---SHHHHHHHHHTTCSEEECCSSCCEEEEE-----------------
T ss_pred ------EEEEEEeCcC-CCCC------C---C---HHHHHHHHHhcCCCEEEeCCcCcceEEE-----------------
Confidence 2455666544 3321 0 0 2467777888999999999999854331
Q ss_pred CCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEE
Q 007233 525 TLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVY 585 (612)
Q Consensus 525 ~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~ 585 (612)
.+++++|-.|+-|.+... .....|+.+++ ++..+.++|+ +.+++++
T Consensus 119 -~~~~~~iNPGSvg~pr~~------------~~~~syail~~-~~~~~~v~~~-~~d~~~~ 164 (173)
T d3ck2a1 119 -EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVY 164 (173)
T ss_dssp -ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBC
T ss_pred -ECCEEEEECCCCCCCCCC------------CCCCEEEEEEE-eCCEEEEEEE-EeCCeEe
Confidence 257888899988865321 11235888888 6788999998 6777643
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.92 E-value=5.5e-09 Score=100.83 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=45.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-------cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-------LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~ 359 (612)
++|+++||.|.+ ...++++++. ..++|.|+++||++.. |... .+..+.+..+..+
T Consensus 1 v~I~visDiHg~---------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~-G~~~--~evi~~l~~l~~~ 62 (251)
T d1nnwa_ 1 VYVAVLANIAGN---------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGL-FPYP--KEVIEVIKDLTKK 62 (251)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS-SSCH--HHHHHHHHHHHHH
T ss_pred CEEEEEEccccC---------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC-CCCc--HHHHHHHHHHhhc
Confidence 479999999943 1223333322 2457999999999953 4322 3455566555556
Q ss_pred CCeEEcCCCCccC
Q 007233 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~v~GNHD~~ 372 (612)
.++++++||||..
T Consensus 63 ~~v~~v~GNHD~~ 75 (251)
T d1nnwa_ 63 ENVKIIRGKYDQI 75 (251)
T ss_dssp SCEEEECCHHHHH
T ss_pred CCEEEEeccHHHH
Confidence 6899999999963
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.80 E-value=3.6e-08 Score=98.71 Aligned_cols=84 Identities=13% Similarity=0.198 Sum_probs=52.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHhhhhhhc-CCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~s-~vP~ 362 (612)
.||++++|+|.+...... ..........++++++. ..++|+||++||++.... .......+.+.++.+.. .+|+
T Consensus 1 Mkilh~SDlHlG~~~~~~--~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v 78 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK--PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPV 78 (333)
T ss_dssp CEEEEECCCCBTCCGGGC--HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEecCcCCCCCcCc--hhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcE
Confidence 489999999986431000 00111223455555543 268999999999995321 22333445555655543 6999
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (333)
T d1ii7a_ 79 FAIEGNHDRT 88 (333)
T ss_dssp EEECCTTTCC
T ss_pred EEeCCCCccc
Confidence 9999999974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.71 E-value=9.5e-08 Score=87.22 Aligned_cols=63 Identities=17% Similarity=0.375 Sum_probs=40.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|+++++|+|.+. ..++.+-+.++. .++|.|+++||++.. .-.+.+..+ ..|++.+.
T Consensus 1 MkI~iiSDiHgn~------------~al~~vl~~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~~~~v~ 57 (165)
T d1s3la_ 1 MKIGIMSDTHDHL------------PNIRKAIEIFND-ENVETVIHCGDFVSL--------FVIKEFENL--NANIIATY 57 (165)
T ss_dssp CEEEEECCCTTCH------------HHHHHHHHHHHH-SCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEEC
T ss_pred CEEEEEEeCCCCH------------HHHHHHHHHHHh-cCCCEEEECCCccCH--------HHHHHHhhc--CccEEEEc
Confidence 4899999999541 112222222332 689999999999831 112222222 56899999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 58 GN~D~~ 63 (165)
T d1s3la_ 58 GNNDGE 63 (165)
T ss_dssp CTTCCC
T ss_pred cccccc
Confidence 999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.40 E-value=1.2e-06 Score=81.80 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=44.9
Q ss_pred EEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 289 VVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 289 f~v~GD~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
+.++||+|.+-..- ...+..+.......+++..+...+.|.|+++||+++..+...++.++ ++.+ +-..+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~~~~---l~~L--~g~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRI---WKAL--PGRKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHH---HHHS--SSEEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHHHHH---HHHC--CCceEEEe
Confidence 56799999764310 01121221111123333333456789999999999765544333333 4433 23568899
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 79 GNHD~~ 84 (188)
T d1xm7a_ 79 GNHDKD 84 (188)
T ss_dssp CTTCCC
T ss_pred cCCCch
Confidence 999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=3.8e-05 Score=70.08 Aligned_cols=69 Identities=10% Similarity=0.200 Sum_probs=42.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc-----hhHHHHHHHhhhhhhcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~-----~~~wd~f~~~i~~l~s~ 359 (612)
.|++++||.|.. ...++++++.. .++|.|+++||++..... ........+.+..+ .
T Consensus 2 Mki~iiSDiHg~---------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~ 64 (184)
T d1su1a_ 2 MKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 64 (184)
T ss_dssp CEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--C
Confidence 489999999943 22334444321 589999999999943211 11112233333332 4
Q ss_pred CCeEEcCCCCccC
Q 007233 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~v~GNHD~~ 372 (612)
.|++.+.||||..
T Consensus 65 ~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 65 HKVIAVRGNCDSE 77 (184)
T ss_dssp GGEEECCCTTCCH
T ss_pred CcEEEecCCCCch
Confidence 5899999999964
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=5.1e-05 Score=76.75 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=47.7
Q ss_pred ceEEEEEeCCEEE--EEEeCCCC-------C------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccC
Q 007233 406 KFWYSTDYGMFRF--CVADTEHD-------W------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 470 (612)
Q Consensus 406 ~~~Ysfd~G~v~f--i~Ldt~~~-------~------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~ 470 (612)
..|.-++.+++++ |++-+... . ....+..+...+.|++. .+...+|++.|.+. ......
T Consensus 128 ~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~-~~d~~~--- 201 (337)
T d1usha2 128 KPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGH-YDNGEH--- 201 (337)
T ss_dssp BSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCC-CGGGCC---
T ss_pred cceeeeecCCeEEEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCc-cccccc---
Confidence 3456678888654 66644321 0 11123333333445432 35677999999886 222110
Q ss_pred CCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007233 471 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 471 ~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
... ... ...+...+...+||+++.||.|..
T Consensus 202 -~~~-~~~-~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 202 -GSN-APG-DVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp -TTS-CCC-HHHHHHHSCTTSSSEEECCSSCCB
T ss_pred -ccc-cch-hHHHHHhCcccCceEEecCccCcc
Confidence 100 111 234444444568999999999975
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.64 E-value=8.8e-05 Score=60.32 Aligned_cols=92 Identities=13% Similarity=0.140 Sum_probs=56.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|..|..+++.-. ..++|+|+|...... .....++|-..-... ....+... . -..++
T Consensus 2 ~p~~p~~L~~~~~-~~~si~vsW~~p~~~-~~~~~i~Y~i~~~~~----~~~~~~~~---------------~--~t~~~ 58 (94)
T d1x5aa1 2 ESLSGLSLKLVKK-EPRQLELTWAGSRPR-NPGGNLSYELHVLNQ----DEEWHQMV---------------L--EPRVL 58 (94)
T ss_dssp CCCCSCCCCEEEE-ETTEEEEECCCCCSS-CCSSCCEEEEEEECS----SCEEEEEE---------------S--SSEEE
T ss_pred cCCCCCceEEEEc-CCCEEEEEEecccCC-CCCcEEEEEEEEecC----CceEEEee---------------c--cCEEE
Confidence 3556666665433 479999999764321 222334454321100 00000000 0 12457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+||+|+|.|.+||......|.+.||+...|+|.|
T Consensus 59 i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 59 LTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 99999999999999987667878899999999986
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.48 E-value=0.00036 Score=69.88 Aligned_cols=86 Identities=20% Similarity=0.208 Sum_probs=43.7
Q ss_pred CeEEEEEeecCCCCCCCCCcccccc--cchHH----HHHHHHHhcCCcc-EEEEeCcccccCCchhHHHHHHHhhhhhhc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQ--YASLN----TTRQLIQDLKNID-IVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~--~~~~~----~~~~i~~~~~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s 358 (612)
.++|+.+.|+|..-.....+ .++. -+.+. .+++..++ .+++ +++.+||+............--+.+-+++.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~-~~~~~~~gg~a~~~~~~~~~~~~-~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQ-PLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSC-GGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred EEEEEEEeccccCCCCcccc-ccccCccccHHHHHHHHHHHHHh-cCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 49999999999633210000 0110 01111 22332232 4566 666899999643211000000122334455
Q ss_pred CCCe-EEcCCCCccCC
Q 007233 359 TVPY-MIASGNHERDW 373 (612)
Q Consensus 359 ~vP~-~~v~GNHD~~~ 373 (612)
.++| ..++||||+++
T Consensus 89 ~lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYL 104 (322)
T ss_dssp TSCCSEECCCGGGSSS
T ss_pred ccCCcEEeecceeccc
Confidence 6777 67899999975
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00015 Score=58.24 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=32.6
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..+|++|+|++.|.+||......|...||+...|+|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 356899999999999999765556678899999999873
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00015 Score=58.31 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=32.4
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..+++||+|+++|.+||......|...||+...|+|.|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 45789999999999999977656766789999999987
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00033 Score=55.94 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=57.3
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|.-+.+... +.++++|+|.-..+ ....-.|+|......... .... ++......+++
T Consensus 4 aP~n~~~~~~-s~~si~l~W~~p~~-~~~~Y~i~y~~~~~~~~~----~~~~-----------------~~~~~~~~i~~ 60 (92)
T d1qg3a1 4 APQNPNAKAA-GSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLL-----------------DSKVPSVELTN 60 (92)
T ss_dssp CCEEEEEEEC-STTCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEE-----------------EESSSEEEECS
T ss_pred cCCCCEEEEc-cCCEEEEEEEecCC-CccceEEeeeeccccccE----EEEe-----------------cCCccEEEECC
Confidence 4555555432 46899999987643 223456777655433211 1111 11234577899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
|+|++.|.+||......|.+.||+...|+|+
T Consensus 61 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 61 LYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp CCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999997765677778998899884
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00069 Score=55.63 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCcceeeecC-CCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 168 APVYPRLAQG-KTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 168 ~p~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+.+... .+.+++.|+|........ ..-.|+|....+..... ...... .+-.+..+
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 75 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 75 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT-SEEEEE-----------------STTCSEEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce-eEEEEe-----------------CCCeeEEE
Confidence 4555665443 457899999986543110 11244554433221110 000111 12234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+||+|++.|.+||......|.+.||+...|+|+.
T Consensus 76 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 76 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp ECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 89999999999999987556767789999999965
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.0024 Score=63.03 Aligned_cols=191 Identities=16% Similarity=0.075 Sum_probs=87.9
Q ss_pred eEEEEEeecCCCCCCC----CCcccccccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchhHHHHHHHhhhhhhcC
Q 007233 287 QRVVIFGDMGKDEADG----SNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~ 359 (612)
++|+.+.|+|..-... ..+... .+.+..+..++++. +++ -+++.+||++.... ...+.+-...+ .++..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~--~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~-~~~~~~g~~~~-~~~n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTP--VGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADR-YFMHR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEE--ECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHH-HHHHH
T ss_pred EEEEEEcccccCcccccccccCCccc--cCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH-hHhhhcchhHH-HHHHh
Confidence 6899999998543110 001111 11233333444331 223 48888999995432 22222111112 22233
Q ss_pred CCe-EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCC---CCCCceEEEEEeCCEEE--EEEeCCC--------
Q 007233 360 VPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA---ENRAKFWYSTDYGMFRF--CVADTEH-------- 425 (612)
Q Consensus 360 vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~---~~~~~~~Ysfd~G~v~f--i~Ldt~~-------- 425 (612)
+.+ ..++||||+++... .+...-.....-....+...... ...-..|..++.+++++ |++-+..
T Consensus 79 ~gyDa~~~GNHEfd~G~~--~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~~~ 156 (302)
T d2z1aa2 79 LRYRAMALGNHEFDLGPG--PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG 156 (302)
T ss_dssp TTCCEEECCGGGGTTCHH--HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCC
T ss_pred cccccccccchhhhcChh--HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccccc
Confidence 333 56899999985210 00000000000000000000000 01123466778888665 5554431
Q ss_pred -C--CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcc
Q 007233 426 -D--WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVH 501 (612)
Q Consensus 426 -~--~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H 501 (612)
. +....+..++..+.|++ .+..-+|++.|... +.-..+.++. +||+++.||.|
T Consensus 157 ~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~--------------------~~d~~la~~~~giD~ii~gh~h 213 (302)
T d2z1aa2 157 PTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY--------------------GEDLKLARRLVGVQVIVGGHSH 213 (302)
T ss_dssp TTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--------------------HHHHHHHTTCSSCCEEEECSSC
T ss_pred CcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCc--------------------chhhHHHhcCCCeeeeecCccc
Confidence 0 11223344455555554 34566899999764 0112233332 79999999999
Q ss_pred cceee
Q 007233 502 NYERT 506 (612)
Q Consensus 502 ~YeR~ 506 (612)
..-..
T Consensus 214 ~~~~~ 218 (302)
T d2z1aa2 214 TLLGS 218 (302)
T ss_dssp CCBSC
T ss_pred eeecc
Confidence 85433
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.00028 Score=57.49 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=32.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++++|+|++.|.|||......|...||+.-.++|.|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 35789999999999999987656667789999999875
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00068 Score=55.05 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=54.4
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.+|..+++..-. .++++|+|......... .-.|+|......... ..... ..+....
T Consensus 4 ~pP~~l~v~~~~-~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 63 (104)
T d2b5ib2 4 MAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGHTWEE--APLLT-----------------LKQKQEW 63 (104)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTT--SCCEE-----------------ECSCCCE
T ss_pred CCCCCcEEEEEe-CCEEEEEEccccccccccceeEEEEEEeccccccee--eeEEe-----------------cCCCcEE
Confidence 466666654433 58999999876431111 124555443322110 00000 0123345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC----ccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNST----YIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~----~~~S~~~~F~T~p 279 (612)
+.|+||+|+|.|.+||......|. ..||+...|+|.|
T Consensus 64 ~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 64 ICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 688999999999999997543342 3567778999986
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00029 Score=56.46 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=33.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++|++|+|++.|.+||......|.+.||+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 356799999999999999877656767789999999986
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00062 Score=56.24 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+++... +.++|+|.|........ ..-.|.|...+...... ... .......
T Consensus 11 P~~P~~l~~~~~-~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~~~ 69 (107)
T d1x5fa1 11 PSAPRDVVASLV-STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV------ENT--------------SHPGEMQ 69 (107)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE------EEC--------------SSTTCSE
T ss_pred CcCCCccEEEEe-cCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEE------EEE--------------eCCCccE
Confidence 456766654332 47899999986432111 12355565433322111 000 0122456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|.+.+|....++|.|
T Consensus 70 ~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 70 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 7899999999999999987666766678888999876
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00035 Score=57.04 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=54.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|....+..-..-.|+|...+..... .... .+. ...+|
T Consensus 11 P~~P~~~~~~~-~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~----~~~~----------------~~~--~~~~i 67 (102)
T d1x5za1 11 PGQPLNFKAEP-ESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITI----------------EPG--TSYRL 67 (102)
T ss_dssp CCCCEEEEEEC-SSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEE----------------CSS--SEEEE
T ss_pred CcCCCCeEEEE-ccCCEEEEEEECCCCCCccceEEEEEeCCCCceE----EEEc----------------CCc--CEEEE
Confidence 45566665542 3478999999875431111234445433221110 0000 011 23468
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+||+|++.|.+||......|.+.+|+...|+|..
T Consensus 68 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 68 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 9999999999999876555666788888899864
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00035 Score=56.80 Aligned_cols=92 Identities=15% Similarity=0.182 Sum_probs=57.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.|..|..+++... +.+++.|.|....... -..-.|+|...++.... ...+. +..+.
T Consensus 3 ~P~~p~~~~~~~~-s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~----~~~~~-----------------~~~~~ 60 (98)
T d1x5la1 3 APSQVVVIRQERA-GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 60 (98)
T ss_dssp CCCCCCCEECSCB-CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCCceEEEec-cCCEEEEEEECCCCCCCCEEEEEEEeeccccccee----eEEec-----------------CCceE
Confidence 4556666665433 3789999998654211 01234666654332211 01111 12245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+|+||+|+++|.+||......|...||+...|+|.
T Consensus 61 ~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 61 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 679999999999999987665666678999999985
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00067 Score=55.09 Aligned_cols=91 Identities=13% Similarity=0.158 Sum_probs=52.3
Q ss_pred CCCCcceeeecC---CCCCcEEEEEEeCCCCC--CCccEEEEe----ecCCCCccccCcceEEecCCcCCCCccceeccC
Q 007233 166 PNAPVYPRLAQG---KTWNEMTVTWTSGYGIN--EAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 236 (612)
Q Consensus 166 ~~~p~~~~La~~---~~~~~m~V~W~t~~~~~--~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~ 236 (612)
|.+|..+.+.+. ...+++.|+|....... .....++|. ..+...+.. ..
T Consensus 3 P~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~-----~~----------------- 60 (104)
T d3d48r2 3 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HF----------------- 60 (104)
T ss_dssp CCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEE-----EE-----------------
T ss_pred CcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceee-----ec-----------------
Confidence 567777666543 24688999999764211 112334443 333222110 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 278 (612)
.+....++|.||+|++.|.+||......|. ..||+...|+|+
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 61 AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 112345678999999999999997655565 568888888875
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.22 E-value=0.00078 Score=53.57 Aligned_cols=84 Identities=19% Similarity=0.251 Sum_probs=50.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+.- .+.+++.|+|.-..+ ......|....+... .... .. -..++
T Consensus 4 P~~P~~l~~~~-~~~~sv~lsW~~p~~---~~~i~~Y~i~~~~~~-------~~~~---------------~~--t~~~~ 55 (88)
T d1k85a_ 4 PTAPTNLASTA-QTTSSITLSWTASTD---NVGVTGYDVYNGTAL-------ATTV---------------TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEE-ECSSCEEEEEECCSC---CSSEEEEEEEESSSE-------EEEE---------------SS--SEEEE
T ss_pred cCCCCCcEEEE-ecCCEEEEEEeCCCC---CCCEEEEEEEccceE-------EEec---------------CC--CEEEE
Confidence 55665555432 246899999986532 235666654321110 0000 01 13468
Q ss_pred cCCCCCCEEEEEEeeecCCC-CccccceEEEEc
Q 007233 246 KELWPNAMYTYKVGHRLFNS-TYIWSSEYQFKA 277 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg-~~~~S~~~~F~T 277 (612)
+||+|++.|.|||......| ...+|+..+++|
T Consensus 56 ~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 99999999999999765555 345677777765
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.20 E-value=0.00077 Score=54.95 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=53.6
Q ss_pred CCCCcceeeec---CCCCCcEEEEEEeCCCCC--CCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccC
Q 007233 166 PNAPVYPRLAQ---GKTWNEMTVTWTSGYGIN--EAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 236 (612)
Q Consensus 166 ~~~p~~~~La~---~~~~~~m~V~W~t~~~~~--~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~ 236 (612)
|++|..+.+.+ ....++++|+|......+ .... .|+|...+...+.. ..
T Consensus 3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~------~~---------------- 60 (103)
T d1f6fb2 3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEI------HF---------------- 60 (103)
T ss_dssp CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEE------EE----------------
T ss_pred CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceee------ec----------------
Confidence 56777666543 234688999998864311 1113 34444443332211 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 278 (612)
.+......+.||+||++|.+||......|. ..||+.-.++|+
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 61 TGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ccceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 011235688999999999999997654453 457777777664
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.00029 Score=57.61 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=32.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..+|+||+|++.|.+||......|.+.||+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 46889999999999999876555666788899999987
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.002 Score=52.10 Aligned_cols=93 Identities=11% Similarity=0.051 Sum_probs=56.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|.-+++... +.++|+|.|......... .-.|+|...++..... ...... .+.....
T Consensus 4 ~P~~~~~~~~-s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~-~~~~~~-----------------~~~~~~~ 64 (101)
T d1x4ya1 4 GPYITFTDAV-NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSD-YKKDMV-----------------EGDRYWH 64 (101)
T ss_dssp CCEEEEEECS-SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGG-CCCEEE-----------------ETTCCEE
T ss_pred CCcccEEEEE-cCCEEEEEEecCcccccccceEEEEEEeeeccceeeee-eeEEEE-----------------cCCeeEE
Confidence 4555554333 468999999864221111 1236666543322211 111111 1123345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+|.+|+|++.|.+||......|...||+...++|..
T Consensus 65 ~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 65 SISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp EECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 689999999999999987666777899999999853
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00081 Score=54.43 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=54.8
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 168 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 168 ~p~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
+|.++.+.... .++++.|+|..+....-..-.|+|...++.... .... -++-...++|+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~---~~~~-----------------v~~~~~~~~l~ 61 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW---KEAT-----------------IPGHLNSYTIK 61 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCC---EEEE-----------------ECSSCCEEEEC
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeecccccee---eeec-----------------cCCCccEEEEC
Confidence 57777777655 479999999986431112356677654432210 0011 13445667999
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
||+||+.|..+|..-...|... .....|+|.
T Consensus 62 gL~P~t~Y~v~v~av~~~G~s~-~~~~~~tT~ 92 (93)
T d1owwa_ 62 GLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 92 (93)
T ss_dssp SCCSSEEEEEEEEEEESSSCEE-EEEEEEEEC
T ss_pred CcccCcEEEEEEEEEeCCCccC-cEEEEEEec
Confidence 9999999999998654333322 124667764
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.00061 Score=56.37 Aligned_cols=93 Identities=15% Similarity=0.203 Sum_probs=52.3
Q ss_pred CCCCCcceeeecCC-CCCcEEEEEEeCCCCCCCccEE----EEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFV----QWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V----~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+.+.. +.+++.|+|..+.+ ...+.. +|...++... ..... .++.
T Consensus 10 ~P~~P~~p~~~~~~~~~~sv~l~W~~P~~--~~~~I~~Y~v~~~~~~~~~~-------~~~~~-------------~~~~ 67 (108)
T d1wf5a1 10 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENNAPWT-------VLLAS-------------VDPK 67 (108)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTTCCCE-------EEESS-------------CCTT
T ss_pred CCCCCCCCEEEEEeccCCEEEEEEECCCC--CCCccEEEEEEEEeccCCce-------EEeee-------------ecCC
Confidence 35567776655543 46899999987643 222334 4443322211 10000 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
....+++||+|++.|.|||......|...||+.-...|.|
T Consensus 68 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P 107 (108)
T d1wf5a1 68 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence 2346789999999999999876444544555554444443
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.00 E-value=0.0012 Score=54.79 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCCCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+...+ ..++++|.|.-..... ...-.|+|....+..+.... .. ...+....
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~------~~------------~~~~~~~~ 66 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIP------PE------------DTASTRSS 66 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECC------GG------------GGCSCCSE
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccc------cc------------cccccccE
Confidence 5677777776544 4789999998643211 11234555544332211100 00 01223456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p 279 (612)
++|++|+|++.|.+||......|.+. ||+...|+|+.
T Consensus 67 ~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 67 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 77999999999999998665555543 45677888854
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.00093 Score=53.97 Aligned_cols=74 Identities=20% Similarity=0.278 Sum_probs=48.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+... +.+++.|+|........-.-.|+|...+...+... .. +.....+|
T Consensus 3 P~~P~nl~v~~~-~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------------------~~~~~~~~ 59 (95)
T d2b5ic1 3 PWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFSL 59 (95)
T ss_dssp CCCCEEEEEEEE-ETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEEE
T ss_pred CcCCCCCEEEEE-eCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe----ee------------------cccceeEc
Confidence 667887776533 35899999998654333356777776554332210 00 11235678
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
.+|+|+++|.+||....
T Consensus 60 ~~L~p~t~Y~frVRa~~ 76 (95)
T d2b5ic1 60 PSVDGQKRYTFRVRSRF 76 (95)
T ss_dssp CSCCTTSCEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEee
Confidence 99999999999998753
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0022 Score=52.26 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=54.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|.-+.+....+.+++.|.|......... .-.|+|...+...... .... .+--..
T Consensus 5 ~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~---~~~~-----------------~~~~t~ 64 (105)
T d1erna2 5 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ---RVEI-----------------LEGRTE 64 (105)
T ss_dssp CCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE---EEEE-----------------CTTCCE
T ss_pred cCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceE---EEee-----------------cCCccE
Confidence 5678878877777778899999875432111 1255665543322110 0000 111235
Q ss_pred EEecCCCCCCEEEEEEeeecC--CCCc---cccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLF--NSTY---IWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~--dg~~---~~S~~~~F~T~ 278 (612)
..|.+|+|+++|.+||..... .+.+ .||+..+++||
T Consensus 65 ~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 65 CVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 678999999999999987532 2223 45666777774
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0008 Score=54.49 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=43.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCC-----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEA-----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
|.+|..+.+... ..+++.|+|......... .-.|+|....+..... .... ...+..
T Consensus 2 P~~P~~l~v~~~-~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~-----~~~~-------------~~~~~~ 62 (101)
T d1iarb2 2 PRAPGNLTVHTN-VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNV-------------TYLEPS 62 (101)
T ss_dssp CCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEE-------------CSSCCE
T ss_pred cccCCcCEEEEE-eCCeEEEEEccccCCCCccceeeEEEEeeecccceeeee-----eeee-------------ccCccc
Confidence 567776665433 368999999876432111 1356666544322210 0100 012334
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..+.+.+|+|+++|.+||......|.+.||+
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wSe 93 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAWAQAYNTTWSE 93 (101)
T ss_dssp EEECC-----CCCEEEEEEEECGGGTCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCCCCcC
Confidence 5678999999999999998764445444554
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0023 Score=52.88 Aligned_cols=93 Identities=22% Similarity=0.324 Sum_probs=55.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC----C----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE----A----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~----~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
|.+|.-+++.. +.+++.|+|........ . .-.|+|...+...... .... ..
T Consensus 6 P~pP~nl~v~~--~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~-----------------~~ 64 (114)
T d2gysa2 6 PPEPRDLQIST--DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDA--AILL-----------------SN 64 (114)
T ss_dssp CCCCEEEEEEE--ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTC--EEEE-----------------ES
T ss_pred CCcCCCeEEEE--eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEE--EEee-----------------cc
Confidence 66787777654 34689999988643111 1 1235555543322110 0000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC------ccccceEEEEcCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNST------YIWSSEYQFKASP 279 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~------~~~S~~~~F~T~p 279 (612)
..-..+.+.+|.|++.|..||......|. ..||+.-.|+|+|
T Consensus 65 ~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 65 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred CceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 22346688999999999999997644332 2577888999976
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0031 Score=50.27 Aligned_cols=90 Identities=18% Similarity=0.171 Sum_probs=51.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.++++|.|..+.+... ..=.|+|...++.... .... ++.....
T Consensus 1 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~----~~~~-----------------~~~~~~~ 58 (93)
T d2vkwa2 1 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKP----EIRL-----------------PSGSDHV 58 (93)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCC----CEEE-----------------CTTCCEE
T ss_pred CCCCccCEe-EEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceee----eeec-----------------cCCceEE
Confidence 456665554 33346899999998754211 1234666655432211 0111 1222456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+++||+|++.|.+||......|....| ...|+|.
T Consensus 59 ~i~~L~p~t~Y~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 59 MLKSLDWNAEYEVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC
T ss_pred EEeccccceEEEEEEEEEcCCCCcCCE-eEEEEec
Confidence 789999999999999876433322222 4567774
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0014 Score=53.47 Aligned_cols=85 Identities=12% Similarity=0.197 Sum_probs=51.8
Q ss_pred CCCCcceeeecC-CCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 166 PNAPVYPRLAQG-KTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 166 ~~~p~~~~La~~-~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
|.+|..+.+... ...+++.|+|......+.. .-.|+|.......+.. .. ..+..
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 60 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT------WM---------------VKDLQ 60 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE------EE---------------CGGGC
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceee------ec---------------cccce
Confidence 677888777653 4578999999975422222 2445555543332211 11 01122
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
...+|.+|+|++.|.+||......|.+.||+
T Consensus 61 ~~~~i~~L~p~t~Y~~rVra~n~~g~g~wSe 91 (104)
T d1n26a3 61 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 91 (104)
T ss_dssp SEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEECCCCCCCEEEEEEEEEeCCCccCCcC
Confidence 3567899999999999998754445555665
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0012 Score=53.29 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=31.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
..+|+||+|+|.|.+||......|...||....++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 4678999999999999998766677788888888874
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0031 Score=51.07 Aligned_cols=91 Identities=16% Similarity=0.088 Sum_probs=52.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++. .-+.+++.|+|....+ .-..-.|+|...++.... ... ++-....+|
T Consensus 1 P~~P~~l~~~-~~t~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~l 56 (102)
T d2cuha1 1 PDGPTQLRAL-NLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPLQ-----AET-----------------PGSAVDYPL 56 (102)
T ss_dssp CSSCEEEECC-CCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCEE-----EEE-----------------ETTCSEEEE
T ss_pred CcCCCccEEE-EeCCCEEEEEEEeeec-cceeeEEEEEecccccee-----eee-----------------eeeeeeEEE
Confidence 4566666653 2347999999987542 123355666543332211 111 112235679
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+||+||++|.++|.....+|... .....|+|.+.+
T Consensus 57 ~~L~p~t~Y~~~V~a~~~~~~s~-~~~~~~~T~~~~ 91 (102)
T d2cuha1 57 HDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 91 (102)
T ss_dssp CSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred ccEEeeEEEEEEEEEEeCCCCcC-CEEEEEECCCCC
Confidence 99999999999998764333222 224578887643
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0029 Score=51.54 Aligned_cols=94 Identities=18% Similarity=0.062 Sum_probs=56.9
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++.. .+.+++.|.|......... .-.|+|............ ...+..++.....
T Consensus 11 pP~~v~v~~-~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 73 (109)
T d1va9a1 11 PPMDVTLQP-VTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS----------------IVEMKATGDSEVY 73 (109)
T ss_dssp CCEEEEEEE-CSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB----------------CCBCCCCSSEEEE
T ss_pred CCcCcEEEE-ecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceee----------------eeEEecCCCeeEE
Confidence 566666543 3478999999975321111 125566544332211000 0011123456778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+|++|+|++.|.+||......|.+.||+.-.|+|.
T Consensus 74 ~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 74 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 89999999999999997765666668888777774
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0023 Score=52.18 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=55.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|..+++.- .+.++++|+|..+.. ...+...|-..-.............. +--....
T Consensus 10 ~P~~P~~~~~~~-~~~~sv~l~W~pp~~--~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------------~~~~~~~ 69 (105)
T d1x3da1 10 EPDIPNPPRIAN-RTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFCQCYM-----------------GSQKQFK 69 (105)
T ss_dssp CCCCCCCCEEEE-EETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCEEEEE-----------------ESCSEEE
T ss_pred CCcCCCCCEEEE-ccCCEEEEEEECCCC--CcCccEEEEEEEecCCCcceeEEEec-----------------CCccEEE
Confidence 455677776653 246899999987643 23455555421100000000001111 1123457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+.+|+|+++|.+||......|...||+...|+|.
T Consensus 70 ~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 70 ITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred ecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 7899999999999997655676778999899884
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.0013 Score=54.31 Aligned_cols=94 Identities=10% Similarity=0.016 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.+.+|.-+.+.. ..++++|+|.-..+... ..-.|+|....+... ++.. ..++..+.
T Consensus 7 ~~sPP~~~~~~~--t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~-------~~~~-------------~~~~~~~~ 64 (108)
T d1v5ja_ 7 GLSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-------VLDP-------------AVAGTETE 64 (108)
T ss_dssp CCCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-------EEEE-------------EECSSCCE
T ss_pred CCCcCCCeEEEE--cCCEEEEEEEecccCCCceeEEEEEeeeeeeeee-------eccc-------------cccceeee
Confidence 344566665443 45789999986543211 123566765433211 1100 00223456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
++++||+|++.|.|||......|...||+...++|+..
T Consensus 65 ~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 77999999999999999765556666777777877654
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.00084 Score=55.09 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=28.8
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
..++||+||++|.+||......|...||+...|+|+
T Consensus 70 ~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 70 HLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 478999999999999997655565667877777774
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.65 E-value=0.0058 Score=48.02 Aligned_cols=75 Identities=19% Similarity=0.335 Sum_probs=45.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|.|....+ .-..-.|+|....+.... ..... ...+-.+.++|+|
T Consensus 3 aP~~l~v~~-~~~~sv~v~W~~p~~-~~~~y~v~y~~~~~~~~~----~~~~~--------------~~~~~~~~~~i~~ 62 (92)
T d1tdqa2 3 APKNLRVGS-RTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVP--------------KGIGPTTKTTLTD 62 (92)
T ss_dssp CCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEE--------------CCSSSEEEEEECS
T ss_pred cCcCCEEEE-ecCCEEEEEEEecCC-cccceEEEEEEcCCCcce----eeEEE--------------ecCCCeeEEEECC
Confidence 455555432 246899999987643 223456777764432210 01100 0134466789999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+|++.|.++|....
T Consensus 63 L~p~t~Y~~~V~a~~ 77 (92)
T d1tdqa2 63 LVPGTEYGVGISAVM 77 (92)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEEe
Confidence 999999999998753
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0044 Score=49.62 Aligned_cols=76 Identities=13% Similarity=0.114 Sum_probs=45.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++.-..+.+.|+|.|.......-..-.|+|....+.... ....+. ++....++|+
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~ 63 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN--SLEEVV-----------------HADQSSCTFD 63 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSC--CEEEEE-----------------CTTCCEEECC
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCce--EEEEEe-----------------CCCccEEEEC
Confidence 357777765444456799999865431112345677754432210 011110 2234568899
Q ss_pred CCCCCCEEEEEEeee
Q 007233 247 ELWPNAMYTYKVGHR 261 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~ 261 (612)
||+||+.|..+|...
T Consensus 64 ~L~p~t~Y~v~V~a~ 78 (94)
T d1fnfa1 64 NLSPGLEYNVSVYTV 78 (94)
T ss_dssp CCCTTSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999865
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.006 Score=48.01 Aligned_cols=74 Identities=16% Similarity=0.164 Sum_probs=45.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++.- .+.++++|+|..... ....-.|+|...++.... ...+. ++-...++|.
T Consensus 3 d~P~~l~v~~-~s~~s~~l~W~~p~~-~~~~y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (90)
T d1tena_ 3 DAPSQIEVKD-VTDTTALITWFKPLA-EIDGIELTYGIKDVPGDR---TTIDL-----------------TEDENQYSIG 60 (90)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCC---EEEEE-----------------ETTCCEEEEC
T ss_pred CCCCCcEEEE-ecCCEEEEEEEeCce-EeccEEEEEEEcCCCcee---EEEEe-----------------cCCcceeeEe
Confidence 4676666643 347899999986542 223457777654432211 01111 1223456899
Q ss_pred CCCCCCEEEEEEeeec
Q 007233 247 ELWPNAMYTYKVGHRL 262 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~ 262 (612)
||+||++|.++|....
T Consensus 61 ~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 61 NLKPDTEYEVSLISRR 76 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred eecCCCEEEEEEEEEe
Confidence 9999999999998764
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.0044 Score=50.46 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=48.4
Q ss_pred CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEE
Q 007233 179 TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 256 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Y 256 (612)
+.++++|.|.-..... ...-.|+|....+..... .... .++-.+..+|++|+|++.|.+
T Consensus 19 ~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~---~~~~----------------~~~~~~~~~i~~L~p~t~Y~f 79 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWA---LVGP----------------LPLEALQYELCGLLPATAYTL 79 (105)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCE---EEEE----------------ECSCEEEEEECSCCSCCCEEE
T ss_pred CCCeEEEEEcCCCCCCceeEEEEEEEEecCCcccee---eeec----------------ccCCcceeEEecccCCeEEEE
Confidence 5789999998653211 112445666543321110 0000 134466778999999999999
Q ss_pred EEeeecCCCCc---cccceEEEEc
Q 007233 257 KVGHRLFNSTY---IWSSEYQFKA 277 (612)
Q Consensus 257 rvg~~~~dg~~---~~S~~~~F~T 277 (612)
||......|.+ .||+..+++|
T Consensus 80 rVra~n~~g~G~~S~wS~~~~~~t 103 (105)
T d2d9qb2 80 QIRCIRWPLPGHWSDWSPSLELRT 103 (105)
T ss_dssp EEEEEECSSCCCCCCCCCCEEECC
T ss_pred EEEEEeCCCCCCCcCCCCCEEEeC
Confidence 99875445553 4666777766
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.0031 Score=51.23 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.+++.|+|......+. ..-.|+|...+...... ... . ....
T Consensus 11 P~~P~~l~v~~-~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~------~~~---------------~--~~~~ 66 (103)
T d1x5ga1 11 PGPAPNLRAYA-ASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD------VDV---------------S--SHSY 66 (103)
T ss_dssp CCCCSSCEEEE-EETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC------EEE---------------C--SSEE
T ss_pred cccCCCcEEEE-ccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEE------Eec---------------c--ccEE
Confidence 55666665433 236899999986432110 12335565543322110 000 0 1245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+|+||+|++.|.++|......|.+.+|+...++|.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 67 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred ecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 78999999999999987655566667888888885
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.0036 Score=51.23 Aligned_cols=96 Identities=11% Similarity=0.073 Sum_probs=51.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.- .+.++++|.|....+... ..-.|+|................. ...+.....
T Consensus 11 P~~P~~~~~~~-~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 74 (111)
T d1wisa1 11 PGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL---------------SNEPDARSM 74 (111)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE---------------ESCTTCSEE
T ss_pred CcCCCCCEEEE-cCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeee---------------ecccceeEE
Confidence 55666666542 347899999986543111 123455654332221110000000 011223346
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEc
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKA 277 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T 277 (612)
.|+||+|++.|.+||.....-|...||+. ..|+|
T Consensus 75 ~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~T 109 (111)
T d1wisa1 75 EVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109 (111)
T ss_dssp EECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence 78999999999999987644444445543 34555
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.51 E-value=0.021 Score=53.79 Aligned_cols=190 Identities=15% Similarity=0.175 Sum_probs=106.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCc---hhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~---~~~wd~f~~~i~~l~s~vP~ 362 (612)
.||+++||.=- ..-.+.+++.+.. .+++||||..|.++ +.|. ....+++++. .+-+
T Consensus 1 MkiLfiGDIvG-------------~~Gr~~v~~~Lp~Lk~~~DfVIaNgENa-a~G~Git~k~~~~L~~~------GVDv 60 (252)
T d2z06a1 1 MRVLFIGDVMA-------------EPGLRAVGLHLPDIRDRYDLVIANGENA-ARGKGLDRRSYRLLREA------GVDL 60 (252)
T ss_dssp CEEEEECCBCH-------------HHHHHHHHHHHHHHGGGCSEEEEECTTT-TTTSSCCHHHHHHHHHH------TCCE
T ss_pred CeEEEEeccCC-------------HHHHHHHHHHhHHHHhhCCEEEEeeecc-CCCcCCCHHHHHHHHHh------CCCE
Confidence 48999999831 1123334333332 13589999999998 5554 2333344333 3443
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHH
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEHC 440 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~~ 440 (612)
.+.|||=++.++.-.+.+ + .+.-.-.++|....+.-|+.|+.++-++.+++-. ....+...=++-+++.
T Consensus 61 -IT~GNH~wdkkei~~~i~------~--~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~ 131 (252)
T d2z06a1 61 -VSLGNHAWDHKEVYALLE------S--EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRL 131 (252)
T ss_dssp -EECCTTTTSCTTHHHHHH------H--SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHH
T ss_pred -EEcCcccccchhhhhhhc------c--ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHH
Confidence 578999987443211110 0 0111122455555677788899888777777642 2222222223334444
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCc
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 520 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~ 520 (612)
|++ .+.+.+||=.|.=- +| .+.-.-.+.+-+|.+|+-=|+|.-. .+.++
T Consensus 132 ~~~---~~~~~i~VDfHaEa--TS---------------EK~A~g~~ldGrvsavvGTHTHV~T-----aD~rI------ 180 (252)
T d2z06a1 132 LEE---EKADYVLVEVHAEA--TS---------------EKMALAHYLDGRASAVLGTHTHVPT-----LDATR------ 180 (252)
T ss_dssp HHH---CCCSEEEEEEECSC--HH---------------HHHHHHHHHBTTBSEEEEESSCSCB-----SCCEE------
T ss_pred Hhh---cCccEEEEEcccch--hh---------------hheeeeEecCCCEEEEEecCccccc-----cccEE------
Confidence 544 35667888888431 00 1233445567899999999999832 11122
Q ss_pred cccCCCCceEEEE-eCCCCCC
Q 007233 521 YYKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 521 ~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ .|+.|..
T Consensus 181 ----Lp~GTayiTDvGM~G~~ 197 (252)
T d2z06a1 181 ----LPKGTLYQTDVGMTGTY 197 (252)
T ss_dssp ----CTTSCEEESCCCCBEES
T ss_pred ----ecCCeEEEccCccccch
Confidence 146888886 7887753
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0028 Score=52.03 Aligned_cols=38 Identities=16% Similarity=0.039 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCC--ccccceEEEEcC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNST--YIWSSEYQFKAS 278 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~--~~~S~~~~F~T~ 278 (612)
...+|++|+||+.|.+||.....++. ..||+...++++
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 35679999999999999987543332 356666666654
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0071 Score=50.79 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=53.3
Q ss_pred CCCcEEEEEEeCCCCCC-CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEE
Q 007233 179 TWNEMTVTWTSGYGINE-AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYK 257 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yr 257 (612)
+.++++|+|.-...... ..-.|+|......... ..-.+... ..+..+..+|+||+|+|.|.+|
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~--~~~~~~~v--------------~~~~~~s~~i~~L~p~t~Y~f~ 91 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT--SSWQNLDA--------------KVPTERSAVLVNLKKGVTYEIK 91 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT--TCCEEEEC--------------CCTTCCEEEEESCCSSEEEEEE
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCC--cceEEEEe--------------ccCceeEEEECCCCCCCEEEEE
Confidence 46899999987532111 1245677644322110 00011110 1123445678999999999999
Q ss_pred EeeecCCCCccccceEEEEcCCCC
Q 007233 258 VGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 258 vg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
|......|...+|+...|+|.+..
T Consensus 92 V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 92 VRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEEEeCCcCcCCCCCEEEEeCCCC
Confidence 987655666667888899998753
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.003 Score=52.86 Aligned_cols=41 Identities=20% Similarity=0.038 Sum_probs=34.3
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 34688999999999999999776566667899999999763
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.44 E-value=0.0068 Score=48.22 Aligned_cols=79 Identities=11% Similarity=0.132 Sum_probs=43.9
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+++. .-+.++++|+|......... .-.|+|...+..... ...+. ..+..+..+
T Consensus 9 ~P~~~~v~-~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~---~~~~~----------------~~~~~~~~~ 68 (95)
T d2ibga1 9 VPELLEIE-EYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEY---FKATI----------------EGAHARSFK 68 (95)
T ss_dssp CCEECCCB-CCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCC---EEEEE----------------ECTTCCEEE
T ss_pred CCcCeEEE-EeCCCEEEEEEEeeeeccCCcccccceeEeeeeeccee---eeeec----------------cCCceeEEE
Confidence 45444432 22478999999864321111 125677654332210 00111 012345668
Q ss_pred ecCCCCCCEEEEEEeeecCCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNST 266 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~ 266 (612)
|+||+|+|.|.+||......|.
T Consensus 69 i~~L~p~t~Y~~~V~A~n~~G~ 90 (95)
T d2ibga1 69 IAPLETATMYEFKLQSFSAASA 90 (95)
T ss_dssp ECSCCTTCEEEEEEEEECSSCB
T ss_pred EeeccCCeEEEEEEEEEeCCcc
Confidence 9999999999999987643343
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0043 Score=51.68 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=33.7
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.....+|+||+|++.|.+||......|.+.||+...|+|.+.
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 68 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 345678999999999999998765456667899999999753
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.31 E-value=0.0053 Score=50.46 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=45.1
Q ss_pred ccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 163 FTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 163 ~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
++-|.+|..+.+.- .+.++++|+|....+... ..-.|+|............. .. .++..
T Consensus 8 ~~pP~~P~~~~v~~-~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~-~~-----------------~~~~~ 68 (108)
T d1x4za1 8 LSPPEAPDRPTIST-ASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT-SA-----------------IPPSR 68 (108)
T ss_dssp CCCCCCCCCCEEEE-CCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE-EE-----------------ECTTC
T ss_pred cCCCccCCCCEEEE-ccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEE-Ee-----------------ecCCc
Confidence 45577888777643 346899999964432110 12345565433221100000 00 01223
Q ss_pred EEEEecCCCCCCEEEEEEeee
Q 007233 241 HTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
...+++||+|++.|.|||...
T Consensus 69 ~~~~v~~L~p~t~Y~frV~A~ 89 (108)
T d1x4za1 69 LSVEITGLEKGISYKFRVRAL 89 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEE
Confidence 446789999999999999865
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.31 E-value=0.0026 Score=53.25 Aligned_cols=39 Identities=13% Similarity=0.255 Sum_probs=32.2
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..+|++|+|+++|.+||......|...||+...|+|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 357899999999999999875556667889999998754
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.01 Score=48.31 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=53.5
Q ss_pred cccccCCCCCcceeeec-CCCCCcEEEEEEeCCCCCC-C----ccEEEEeecCCCCccccCcceEEecCCcCCCCcccee
Q 007233 160 KIAFTNPNAPVYPRLAQ-GKTWNEMTVTWTSGYGINE-A----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVG 233 (612)
Q Consensus 160 ~~~~~~~~~p~~~~La~-~~~~~~m~V~W~t~~~~~~-~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g 233 (612)
|+...-|.+|.-+.+.. ....++++|+|........ . .-.++|...+...+.. ..
T Consensus 2 p~~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~-----~~-------------- 62 (109)
T d1uc6a_ 2 PLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH-----VE-------------- 62 (109)
T ss_dssp CTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC-----EE--------------
T ss_pred CCCCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEE-----ec--------------
Confidence 34444577888887764 3457899999997542111 1 2334444433322210 00
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEc
Q 007233 234 WRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKA 277 (612)
Q Consensus 234 ~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T 277 (612)
.+-....+|.+|+|+|.|.+||.... ++.. .||+...++|
T Consensus 63 ---~~~~~~~~i~~L~~~t~Y~~rVrA~~-~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 63 ---LSNGTAHTITDAYAGKEYIIQVAAKD-NEIGTWSDWSVAAHATP 105 (109)
T ss_dssp ---ESSCSEEEETTCCSSSCEEEEEECCB-SSSCCCCCCCEEEEECC
T ss_pred ---cCCceeEEeCCCCCCCEEEEEEEEEE-CCCCCcCCCCCCEEeEC
Confidence 01123457899999999999998643 2333 3455444433
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.017 Score=45.56 Aligned_cols=87 Identities=21% Similarity=0.225 Sum_probs=49.3
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+.+. ..+.++++|+|....+ ....-.|+|...++... .... ++.....+|+|
T Consensus 4 ~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~i~~ 59 (93)
T d2cuma1 4 APRDLEAK-EVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQTQ-----EILL-----------------PGGITSHQLLG 59 (93)
T ss_dssp CCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEECTTSCEE-----EEEE-----------------CSSCSEEEECS
T ss_pred cCCCCEEE-EeCCCEEEEEEEcccc-ccccEEEEEEccccccE-----EEEE-----------------CCCccEEEEeC
Confidence 45444433 2247899999987643 22345667765432211 0111 11233567999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+||++|.++|......|.... ....|+|..
T Consensus 60 L~p~t~Y~~~V~a~~~~g~s~~-~~~~~tT~g 90 (93)
T d2cuma1 60 LFPSTSYNARLQAMWGQSLLPP-VSTSFTTGG 90 (93)
T ss_dssp CCTTCEEEEEEEEEBTTBCCCC-EEEEEECCC
T ss_pred ccCCCEEEEEEEEEeCCCCCCC-EEEEEEeCC
Confidence 9999999999987643332221 134677744
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0087 Score=49.55 Aligned_cols=94 Identities=9% Similarity=0.058 Sum_probs=53.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+.+.. .+.+++.|.|........ ..-.|+|.......... ..... .+....
T Consensus 20 ~P~~P~~~~~~~-~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~---~~~~~----------------~~~~~~ 79 (117)
T d1wfoa1 20 VPGPPMGILFPE-VRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTA---TVEVL----------------APSARQ 79 (117)
T ss_dssp CCCCCCCCEEEE-ECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCC---CEEEE----------------CTTCCE
T ss_pred CCcCCCCcEEEE-ecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceE---eEEec----------------CCceEE
Confidence 355666665542 247899999976543111 12346665443322110 00000 111234
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+++||+|++.|.+||......|...+|+...++|.
T Consensus 80 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 80 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence 568999999999999997654555567777777663
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.11 E-value=0.019 Score=46.61 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=27.9
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKAS 278 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~ 278 (612)
+.-...+|+||+|+++|.+||......|...+|. .-.|++.
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~~~ 106 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ 106 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCEEECCCCCCEEEC
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCCCCCCCCCCEEcC
Confidence 4556788999999999999999764445444443 2334443
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.014 Score=45.75 Aligned_cols=73 Identities=19% Similarity=0.282 Sum_probs=43.4
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++. .-+.++++|.|....+.....-.|+|....+.... ...+. ++-...++|+|
T Consensus 3 pP~~l~~~-~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (91)
T d1fnfa2 3 PPTDLRFT-NIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 61 (91)
T ss_dssp CCEEEEEE-SCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCC---EEEEE-----------------CTTCCEEEECS
T ss_pred cCCceEEE-EeCCCEEEEEEEecCCCCcceeEEEEEECCCCccE---EEEEe-----------------CCCceEEEEec
Confidence 45555543 22478999999876432122346777755432211 00111 12234578999
Q ss_pred CCCCCEEEEEEeee
Q 007233 248 LWPNAMYTYKVGHR 261 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~ 261 (612)
|+|++.|.++|..-
T Consensus 62 L~p~t~Y~~~V~a~ 75 (91)
T d1fnfa2 62 LLPGTEYVVSVSSV 75 (91)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999865
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.10 E-value=0.014 Score=45.39 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=44.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|+|....+ .-..-.|+|...+..... ... ++-....+|+|
T Consensus 2 aP~~l~v~~-~t~~sv~v~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~~~~ 57 (87)
T d1qr4a1 2 NPKDLEVSD-PTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKNE-----MEI-----------------PVDSTSFILRG 57 (87)
T ss_dssp CCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECTTCCEEE-----EEE-----------------CTTCSEEEEES
T ss_pred cCcCcEEEE-ecCCEEEEEEECCCC-CcceeEEEeecCCcceeE-----EeC-----------------CCCcCEEEECC
Confidence 465555432 246899999997643 123346777654332110 111 11234568999
Q ss_pred CCCCCEEEEEEeeecCCC
Q 007233 248 LWPNAMYTYKVGHRLFNS 265 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg 265 (612)
|+||++|.++|.....+|
T Consensus 58 L~p~t~Y~v~V~a~~~~~ 75 (87)
T d1qr4a1 58 LDAGTEYTISLVAEKGRH 75 (87)
T ss_dssp CCSSCEEEEEEEEESSSC
T ss_pred CCcCCEEEEEEEEEcCCC
Confidence 999999999998764333
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.011 Score=46.59 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=43.6
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++.- -+.++++|.|....+ ....-.++|....+.... ... ...+.....+++
T Consensus 3 d~P~~l~v~~-vt~~sv~l~W~~p~~-~~~~y~i~~~~~~~~~~~-------~~~-------------~~~~~~~~~~i~ 60 (94)
T d1j8ka_ 3 DRPKGLAFTD-VDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIHE-------LFP-------------APDGEEDTAELQ 60 (94)
T ss_dssp CCCCCCEEEE-EETTEEEEECCCCSS-CCSCEEEEEEETTTEEEE-------ECC-------------CCCSSCCEEEEC
T ss_pred CCCCCCEEEE-ecCCEEEEEEeCCCc-cccceEEEEEeecCCCce-------EEE-------------ecCCCccEEEEC
Confidence 4676665532 236899999976532 123456677654332110 000 011233456789
Q ss_pred CCCCCCEEEEEEeee
Q 007233 247 ELWPNAMYTYKVGHR 261 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~ 261 (612)
||+|||.|.++|...
T Consensus 61 ~L~p~t~Y~~~V~a~ 75 (94)
T d1j8ka_ 61 GLRPGSEYTVSVVAL 75 (94)
T ss_dssp SCCCCSEEEEEEEEC
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999875
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.06 E-value=0.0032 Score=58.42 Aligned_cols=63 Identities=17% Similarity=0.323 Sum_probs=42.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||.|.. ...+++++++. ...|.++++||+++ .|..+ .+ .++ +..+.-+..
T Consensus 14 rI~vIgDIHG~---------------~~~L~~lL~~i~~~~~~d~lv~lGD~vD-rGp~s--~~---vl~-~l~~~~~~~ 71 (219)
T d1g5ba_ 14 NIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVD-RGAEN--VE---CLE-LITFPWFRA 71 (219)
T ss_dssp CEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSS-SSSCH--HH---HHG-GGGSTTEEE
T ss_pred eEEEEEecccC---------------HHHHHHHHHHcCCCCCCCEEEEeCCccc-cCccH--HH---HHH-Hhhcccccc
Confidence 69999999854 34566666653 35689999999995 44432 12 222 223456789
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 72 i~GNHE~~ 79 (219)
T d1g5ba_ 72 VRGNHEQM 79 (219)
T ss_dssp CCCHHHHH
T ss_pred ccCcHHHH
Confidence 99999963
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.05 E-value=0.008 Score=48.38 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=43.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+.- .+.++++|+|........ ..-.|+|...++..+..... . +.....
T Consensus 2 P~~P~~~~v~~-~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~-----------~---------~~~~~~ 60 (98)
T d1x5ya1 2 TSAPQHLTVED-VTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK-----------E---------PVERCG 60 (98)
T ss_dssp CCCCEEEEEEE-ECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS-----------S---------CBSSSE
T ss_pred CCCCcCcEEEE-ccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee-----------e---------cCceeE
Confidence 45666665542 246899999986432111 12456666554433321110 0 111234
Q ss_pred EEecCCCCCCEEEEEEeee
Q 007233 243 SFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+++||+||+.|.|||...
T Consensus 61 ~~v~~L~~~~~Y~frV~A~ 79 (98)
T d1x5ya1 61 FTVKDLPTGARILFRVVGV 79 (98)
T ss_dssp EEEECCCTTCCEEEEEEEE
T ss_pred EEECCCcCCeEEEEEEEEE
Confidence 5789999999999999875
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.03 E-value=0.0076 Score=47.09 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=43.4
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++... +.++++|.|....+ .-..-.|+|...++.... .... +-.-+++|+|
T Consensus 3 ~P~nl~v~~~-~~~s~~l~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~~~~~~~ 58 (86)
T d1tdqa3 3 SPRDLMVTAS-SETSISLIWTKASG-PIDHYRITFTPSSGISSE-----VTVP-----------------RDRTSYTLTD 58 (86)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCCS-CCSEEEEEEECSSSCCEE-----EEEE-----------------SSCSEEEECC
T ss_pred cCCCCEEEEe-cCCEEEEEEeCCCC-CccceEEEEecccccceE-----EEeC-----------------CCccEEEECC
Confidence 4555554432 47899999987643 223457777654432211 1111 1123568999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||+.|.++|....
T Consensus 59 L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 59 LEPGAEYIISITAER 73 (86)
T ss_dssp CCTTCCEEEEEEEEE
T ss_pred CccccEEEEEEEEEc
Confidence 999999999998753
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.03 E-value=0.013 Score=47.75 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=47.0
Q ss_pred CCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEE
Q 007233 178 KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMY 254 (612)
Q Consensus 178 ~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y 254 (612)
...+++.|.|....... ...-.|+|....+ ..+.. ... ...-.+..+|++|+|+|.|
T Consensus 19 ~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~----v~~----------------~~~~~~~~~l~~L~p~t~Y 78 (106)
T d1cd9b2 19 HQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTL----VFH----------------LPSSKDQFELCGLHQAPVY 78 (106)
T ss_dssp -CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEE----EEE----------------EESCEEEEEECCCCSCSCE
T ss_pred CCCCEEEEEEcCcccCCccceEEEEEEeecccccccee----eec----------------ccCCceEEEEeccCCCeEE
Confidence 35789999998653211 0123677765432 22211 000 0123466679999999999
Q ss_pred EEEEeeecCCCCcccc---ceEEEEc
Q 007233 255 TYKVGHRLFNSTYIWS---SEYQFKA 277 (612)
Q Consensus 255 ~Yrvg~~~~dg~~~~S---~~~~F~T 277 (612)
.+||......|.+.|| ...+|+|
T Consensus 79 ~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 79 TLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp EEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred EEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 9999876556664454 5566654
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0074 Score=51.52 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=33.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...||+...|+|++.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4578999999999999999766566667888899999754
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.012 Score=45.93 Aligned_cols=86 Identities=13% Similarity=0.002 Sum_probs=47.8
Q ss_pred CcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCC
Q 007233 169 PVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKEL 248 (612)
Q Consensus 169 p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL 248 (612)
|..+++.- -+.++++|.|..... ......++|......... ..... +.-.-..+|+||
T Consensus 3 P~~l~~~~-v~~~si~l~W~~p~~-~~~~~~i~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~L 60 (90)
T d1fnha1 3 PTDLKFTQ-VTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVVSGL 60 (90)
T ss_dssp CEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEESSSCSCC---CEEEE-----------------CTTCCEEEECSC
T ss_pred CCCEEEEE-ecCCEEEEEEEccce-eccceEEEEEeeeCCCce---EEEEe-----------------CCCCeEEEEecc
Confidence 44444322 247899999987643 223456777654332211 00110 111234689999
Q ss_pred CCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 249 WPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 249 ~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
+||++|.+||......|....+ ...|+|
T Consensus 61 ~p~t~Y~~~V~a~n~~g~s~~~-~~~~~T 88 (90)
T d1fnha1 61 MVATKYEVSVYALKDTLTSRPA-QGVVTT 88 (90)
T ss_dssp CTTCEEEEEEEEEETTEECCCE-EEEEEC
T ss_pred cCceEEEEEEEEEeCCCCcCCE-eEEEEc
Confidence 9999999999976433332222 234555
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.98 E-value=0.022 Score=47.43 Aligned_cols=110 Identities=9% Similarity=0.087 Sum_probs=59.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.|.+|..+.+.. ..+++.|+|.-+.... -..-.|+|............. ..+.+ .|..+.... ...+..-.
T Consensus 7 ~P~aP~~v~v~~--~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~-~~~~~--~~~~~~~~~--~~~~~~~~ 79 (123)
T d1wfta_ 7 GPGAPSTVRISK--NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQ-LVFMR--IYCGLKTSC--TVTAGQLA 79 (123)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCC-CEEEE--EEEESCSEE--EEEHHHHT
T ss_pred CCcCCcccEEEe--CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccce-eeeEE--EecCCceeE--eecCCccE
Confidence 466777777654 4688999998653211 123556776554432211110 00100 000000000 00011112
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
..+++|+|++.|.+||......|...||+...|+|....
T Consensus 80 ~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 80 NAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp TCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred EEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 357899999999999997655566667888889986643
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.016 Score=45.20 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=43.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|+|..... .-..-.|+|...++....... ..++-....+|+|
T Consensus 3 aP~nl~v~~-~~~~s~~l~W~~p~~-~i~~Y~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 60 (89)
T d1fnha3 3 APSNLRFLA-TTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEATITG 60 (89)
T ss_dssp CCEEEEEEE-EETTEEEEEEECCSS-CCSEEEEEEECTTSCCEECTT--------------------CCCTTCCEEEEES
T ss_pred cCcCCEEEE-ecCCEEEEEEeCCCc-CCceEEEEEeeccCCccEEEE--------------------EcCCCccEEEEEe
Confidence 455555432 236899999987542 123346777654432211000 0012234568999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||+.|.++|....
T Consensus 61 L~p~t~Y~~~V~a~n 75 (89)
T d1fnha3 61 LEPGTEYTIYVIALK 75 (89)
T ss_dssp CCTTCEEEEEEEEES
T ss_pred eeCCCEEEEEEEEEc
Confidence 999999999998753
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.96 E-value=0.013 Score=46.29 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=44.8
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++... +.++++|+|..... ....-.|+|....+.... ..+. .++.....+++
T Consensus 5 ~~P~~l~v~~v-~~~si~v~W~~p~~-~~~~y~i~~~~~~~~~~~-----~~~~---------------~~~~~~~~~i~ 62 (93)
T d1tdqa1 5 DGPTQILVRDV-SDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK-----TTFR---------------LQPPLSQYSVQ 62 (93)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC-----EEEE---------------ECTTCSEEEEC
T ss_pred CcCCCCEEEEe-CCCEEEEEEEcccc-CCCceEEEEEeccCccee-----eEEE---------------eCCCceEEEEe
Confidence 35666665443 35789999986542 223456777665432211 1111 11223456899
Q ss_pred CCCCCCEEEEEEeeec
Q 007233 247 ELWPNAMYTYKVGHRL 262 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~ 262 (612)
||+||++|.++|....
T Consensus 63 ~L~p~t~Y~v~V~a~~ 78 (93)
T d1tdqa1 63 ALRPGSRYEVSISAVR 78 (93)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CcccceEEEEEEEEEe
Confidence 9999999999998753
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.93 E-value=0.082 Score=49.79 Aligned_cols=192 Identities=14% Similarity=0.077 Sum_probs=105.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-CCccEEEEeCcccccCCc---hhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-KNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~pDfvl~~GDi~Y~~g~---~~~wd~f~~~i~~l~s~vP~ 362 (612)
.||+++||.=- ..-.+.+++.+..+ ++.||||..|.++ +.|. ....+++++. .+-+
T Consensus 1 MkILfiGDIvG-------------~~Gr~~v~~~Lp~lk~~~DfVIaNgENa-a~G~Git~~~~~~l~~~------GvDv 60 (255)
T d1t70a_ 1 MRVLFIGDVFG-------------QPGRRVLQNHLPTIRPQFDFVIVNMENS-AGGFGMHRDAARGALEA------GAGC 60 (255)
T ss_dssp CEEEEECCBBH-------------HHHHHHHHHHHHHHGGGCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCSE
T ss_pred CeEEEEecCCC-------------HHHHHHHHHHhHHHHhhCCEEEECCccC-CCCcCCCHHHHHHHHHc------CCcE
Confidence 48999999821 11233444433321 3589999999999 5554 2333333332 3444
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCC-CCCCceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHH
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEH 439 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~ 439 (612)
.+.|||=++.++.-.+... +. .....-.++|. ...+.-|+.++..+.++.+++-. ....+-..=++=+++
T Consensus 61 -iT~GNH~wdkkei~~~i~~-----~~-~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~ 133 (255)
T d1t70a_ 61 -LTLGNHAWHHKDIYPMLSE-----DT-YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDA 133 (255)
T ss_dssp -EECCTTTTSSTTHHHHHHT-----TC-SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHH
T ss_pred -EEcCchhhcchhHHHHHhh-----cc-hhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHH
Confidence 4789998864332111100 00 00011112342 23466678888888777776632 222222233444566
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCC
Q 007233 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEK 519 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~ 519 (612)
.|++ .+.+.+||=+|.=- +| .+.-.-.+.+-+|.+|+-=|+|.-. .+.++.
T Consensus 134 ~l~~---~~~~~i~VDfHaEa--TS---------------EK~A~g~~ldGrvsav~GTHTHV~T-----aD~rIl---- 184 (255)
T d1t70a_ 134 LLER---DDLGTVFVDFHAEA--TS---------------EKEAMGWHLAGRVAAVIGTHTHVPT-----ADTRIL---- 184 (255)
T ss_dssp HTTC---SSCCEEEEEEECSC--HH---------------HHHHHHHHHTTSSSEEEEESSCSCB-----SCCEEE----
T ss_pred HHhh---cCCCeEEEEccchh--HH---------------HHHHHHhhhcCcEEEEEecCccccc-----ccceEe----
Confidence 6665 34566888888431 00 1223344557899999999999832 111221
Q ss_pred ccccCCCCceEEEE-eCCCCCC
Q 007233 520 NYYKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 520 ~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
++||-|++ .|+.|..
T Consensus 185 ------p~GTay~TDvGMtG~~ 200 (255)
T d1t70a_ 185 ------KGGTAYQTDAGFTGPH 200 (255)
T ss_dssp ------TTTEEEESCCCCBEES
T ss_pred ------cCCcEEEecCccccch
Confidence 36888886 7887763
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.017 Score=45.29 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=43.4
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++. ..+.++|+|.|....+ ....-.|+|....+.... ... .++-.....|+|
T Consensus 4 pP~~l~v~-~~~~~si~v~W~~p~~-~~~~Y~i~~~~~~~~~~~----~~~-----------------~~~~~~~~~i~~ 60 (90)
T d1fnha2 4 PPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRT-----------------IKPDVRSYTITG 60 (90)
T ss_dssp CCEEEEEE-EECSSEEEEEEECCSS-CCCCEEEEEEESSSSCCE----EEE-----------------CCTTCSEEEEES
T ss_pred cCCCCEEE-EecCCEEEEEEECCCC-CCceeEEEEEEccCCceE----EEe-----------------cCCCccEEEeCC
Confidence 56666654 2347899999986542 123456667654332110 000 012234557899
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||++|.++|....
T Consensus 61 L~p~t~Y~~~V~a~~ 75 (90)
T d1fnha2 61 LQPGTDYKIYLYTLN 75 (90)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred CCCCcEEEEEEEEEe
Confidence 999999999998753
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.91 E-value=0.012 Score=49.25 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=53.8
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
.-|.+|..+++... +.+++.|.|........ ..-.++|........... .... ....+
T Consensus 15 d~P~~P~~~~v~~~-~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~~ 74 (127)
T d1ueya_ 15 DVPNPPFDLELTDQ-LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH--HQTE-----------------VSGTQ 74 (127)
T ss_dssp CSCCCCEEEEEECC-SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE--EEEE-----------------EESSC
T ss_pred ccCcCCCCcEEEEe-cCCeEEEEEeCCcccccceEeeeeeeccccccceeEE--EEee-----------------cCCce
Confidence 45667777766432 36899999987543211 123333333222211000 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~ 280 (612)
...+++|+|++.|.+||......|...||+. ..|+|.+.
T Consensus 75 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 75 TTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 4567899999999999987654555556654 45677664
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.91 E-value=0.014 Score=45.62 Aligned_cols=71 Identities=23% Similarity=0.225 Sum_probs=43.5
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+.+.-. +.++|+|+|....+ .-..-.|+|......... ..++. +-...++|+|
T Consensus 3 ~P~~l~v~~v-~~~s~~l~W~~~~~-~~~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~ 59 (88)
T d1qr4a2 3 SPKGISFSDI-TENSATVSWTPPRS-RVDSYRVSYVPITGGTPN----VVTVD-----------------GSKTRTKLVK 59 (88)
T ss_dssp CCSCEEEESC-CSSCEEEEECCCSS-CCSEEEEEEEETTCCCCE----EEEEE-----------------TTCCEEEECS
T ss_pred CCcceEEEEe-cCCEEEEEEEcccE-eeceEEEEEEeccCCceE----EEEec-----------------CCccEEEECC
Confidence 4555554333 37899999986532 223456777654432211 11111 1224578999
Q ss_pred CCCCCEEEEEEeee
Q 007233 248 LWPNAMYTYKVGHR 261 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~ 261 (612)
|+||++|.++|..-
T Consensus 60 L~p~t~Y~~~V~a~ 73 (88)
T d1qr4a2 60 LVPGVDYNVNIISV 73 (88)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999865
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.0087 Score=48.14 Aligned_cols=81 Identities=16% Similarity=0.132 Sum_probs=43.0
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-+++... +.++++|.|.-..... -..-.|+|.......... ........ ...-...+
T Consensus 3 P~~P~~~~~~~~-~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~ 66 (103)
T d1qg3a2 3 PSEPGRLAFNVV-SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVLV--------------DNPKNRML 66 (103)
T ss_dssp CCCCCCCEEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC-SCCEEEEE--------------CCTTCCEE
T ss_pred CccCCCcEEEEe-cCCEEEEEEEECccCCCCceEEEEEeeccccccccc-cceEEEEe--------------cCCCceEE
Confidence 445666555332 3679999998654321 112245554433221110 10011000 11123467
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007233 244 FLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~ 262 (612)
+++||+|++.|.+||....
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n 85 (103)
T d1qg3a2 67 LIENLRESQPYRYTVKARN 85 (103)
T ss_dssp EECCCCTTCCEEEEEEEEE
T ss_pred EEeecCCCCEEEEEEEEEc
Confidence 8999999999999998653
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.84 E-value=0.0047 Score=49.69 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=42.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-+++..+ .++++|+|..+.+... ..-.|+|............. .... -.+..
T Consensus 6 P~~P~~~~v~~~--~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~ 64 (100)
T d1cfba1 6 PNAPKLTGITCQ--ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY-EKVP------------------NTDSS 64 (100)
T ss_dssp CCCCEEEEEEEC--SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE-EEEE------------------TTCSE
T ss_pred CCcCcCcEEEEc--CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEe-eecC------------------CceEE
Confidence 567777776543 4689999986643111 12355665443322111000 0000 01234
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007233 244 FLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~ 262 (612)
.+++|+|++.|.+||....
T Consensus 65 ~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 65 FVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp EEEECCSSEEEEEEEEEEE
T ss_pred EEecCCCCCEEEEEEEEEe
Confidence 6789999999999998763
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.015 Score=46.46 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=46.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCcc-cc--CcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTH-SP--AGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~-~~--~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|-.|..+++.-- +.++++|.|....+ ....-.|+|......... .. ....... .++-...
T Consensus 4 Pp~~~~l~v~~~-t~~sv~v~W~pp~~-~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 66 (101)
T d2cuia1 4 RPRLSQLSVTDV-TTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELM---------------VPGTRHS 66 (101)
T ss_dssp CCCCCCCEEESC-CSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEE---------------EETTCCE
T ss_pred ccCCCCcEEEEE-CCCEEEEEEEeccc-cccceEEEEEecCCCceeeccCCcceeEee---------------cccceeE
Confidence 344555554332 47899999976532 223467777754332211 10 1101100 1223345
Q ss_pred EEecCCCCCCEEEEEEeeecCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNS 265 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg 265 (612)
.+|+||+|+++|.++|.....+|
T Consensus 67 ~~v~~L~p~t~Y~~~V~a~~~~g 89 (101)
T d2cuia1 67 AVLRDLRSGTLYSLTLYGLRGPH 89 (101)
T ss_dssp EEECSCCTTCEEEEEEEEECSSS
T ss_pred EEeCCCCcCCEEEEEEEEEeCCc
Confidence 67899999999999998764333
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.0077 Score=50.05 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-C-CccEEEEeecCCCC-ccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-E-AEAFVQWGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+..- +.++++|+|....+.. + ..-.|+|....... +.. .... .-...
T Consensus 16 P~pP~~~~v~~~-~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~~-----------------~~~~~ 73 (117)
T d1uema_ 16 PGPPSKPQVTDV-TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQT----VANH-----------------VKTTL 73 (117)
T ss_dssp CBCCCCCEEEEE-CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEE----EEEE-----------------ECSSE
T ss_pred CcCCCCCEEEEc-cCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEE----eccc-----------------ccccc
Confidence 567777776432 4679999997543211 1 12344554432211 110 0000 00124
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p 279 (612)
.+|+||+|++.|.+||......|...||+.- .++|.+
T Consensus 74 ~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~ 111 (117)
T d1uema_ 74 YTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD 111 (117)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCC
T ss_pred ceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCC
Confidence 5689999999999999875434444455543 356654
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.71 E-value=0.023 Score=44.83 Aligned_cols=74 Identities=11% Similarity=-0.053 Sum_probs=42.4
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|.|....+..-..-.|+|...++.... .... .++-....+|+|
T Consensus 8 ~P~~l~v~~-~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~-----~~~~---------------~~~~~t~~~i~~ 66 (95)
T d2fnba_ 8 QLTDLSFVD-ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI-----FEDF---------------VDSSVGYYTVTG 66 (95)
T ss_dssp CCTTCEEEC-CCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEE-----EEEE---------------CCSSCSEEEECC
T ss_pred cCCCeEEEE-EcCCEEEEEEEecCCceEEeEEEEEEEeeccceE-----EEEE---------------eCCCCeEEEEec
Confidence 455555432 2478999999865431112335666654332211 0000 012234567999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||+.|.++|....
T Consensus 67 L~p~t~Y~~~V~a~~ 81 (95)
T d2fnba_ 67 LEPGIDYDISVITLI 81 (95)
T ss_dssp CCTTSEEEEEEEEEE
T ss_pred ccCCEEEEEEEEEEe
Confidence 999999999998753
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.027 Score=43.91 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=43.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- -+.++++|+|....+ ....-.|+|......... ..... ++-....+|+|
T Consensus 3 ~P~~l~v~~-vt~~sv~l~W~~p~~-~~~~Y~i~~~~~~~~~~~---~~~~v-----------------~~~~~~~~i~~ 60 (89)
T d1fnfa3 3 SPTGIDFSD-ITANSFTVHWIAPRA-TITGYRIRHHPEHFSGRP---REDRV-----------------PHSRNSITLTN 60 (89)
T ss_dssp CCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECSCCSSCC---EEEEE-----------------ETTCCEEEEES
T ss_pred cCcCCEEEE-ecCCEEEEEEEeCCC-EEeeEEEEEEECCCCCce---EEEEE-----------------CCCccEEEECC
Confidence 565555442 247999999987643 122345777754432211 01111 12234568999
Q ss_pred CCCCCEEEEEEeee
Q 007233 248 LWPNAMYTYKVGHR 261 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~ 261 (612)
|+|++.|.++|..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 61 LTPGTEYVVSIVAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CcccCEEEEEEEEE
Confidence 99999999999875
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.012 Score=48.31 Aligned_cols=90 Identities=14% Similarity=0.049 Sum_probs=50.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|.-+++..+ .+++.|+|.-....+. ..-.|+|+..+.... ... ..+.....
T Consensus 21 P~~P~~~~~~~~--~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~-------~~~---------------~~~~~~~~ 76 (113)
T d1x5ia1 21 PEVPSSLHVRPL--VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-------TIK---------------VDYKQRYY 76 (113)
T ss_dssp CCSCSEEEEEEE--TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGE-------EEE---------------CCTTCCEE
T ss_pred CCCCEeeeeeeC--CCEEEEEEEccccCCccEEEEEEEeeeccccce-------eee---------------eeCCccEE
Confidence 456776766544 4689999986532110 112455543322111 100 01223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|.+|+|++.|.+||......|.+..+ .-+++|.|.
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~~-~~~~~T~P~ 112 (113)
T d1x5ia1 77 TIENLDPSSHYVITLKAFNNVGEGIPL-YESAVTRPH 112 (113)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCCC-CCCEECCCC
T ss_pred EEeccccCcEEEEEEEEECCCcCCCCe-eeEEEeCCC
Confidence 799999999999999876433322211 346777663
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.59 E-value=0.023 Score=45.62 Aligned_cols=87 Identities=14% Similarity=-0.002 Sum_probs=46.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+.-. +.++++|+|....... -..-.++|.......+..... .......
T Consensus 3 p~pP~~p~~~~~-t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 61 (104)
T d1bpva_ 3 IDPPGKPVPLNI-TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF--------------------SNILENE 61 (104)
T ss_dssp CCCCCCCEEEEE-ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC--------------------SCCCSSE
T ss_pred CCCCCCCEEEEe-cCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe--------------------eccceeE
Confidence 445666654321 3579999998542211 122455565543322211000 0112344
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceE
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNST-YIWSSEY 273 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~ 273 (612)
.+++||+|+|+|.|||......|. ..+|+.-
T Consensus 62 ~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s 93 (104)
T d1bpva_ 62 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPS 93 (104)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEECCCCCCCCcCCC
Confidence 678999999999999997633342 2344443
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.021 Score=44.75 Aligned_cols=66 Identities=21% Similarity=0.270 Sum_probs=40.4
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEE
Q 007233 179 TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKV 258 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrv 258 (612)
+.++++|+|....+ ....-.|+|...++.... ..... ++-...+.|+||+||++|.++|
T Consensus 9 t~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAV-TVRYYRITYGETGGNSPV---QEFTV-----------------PGSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSS-CCSEEEEEEEETTCCSCC---EEEEE-----------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccce-EecEEEEEEEcCCCCcee---EEEEe-----------------CCCccEEEeCCCCCCCEEEEEE
Confidence 46899999986543 223456777765433211 01111 1122357899999999999999
Q ss_pred eeecCCC
Q 007233 259 GHRLFNS 265 (612)
Q Consensus 259 g~~~~dg 265 (612)
..-...|
T Consensus 68 ~a~~~~g 74 (91)
T d1fnaa_ 68 YAVTGRG 74 (91)
T ss_dssp EEECTTC
T ss_pred EEEeCCc
Confidence 8754334
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.48 E-value=0.0093 Score=47.71 Aligned_cols=83 Identities=16% Similarity=0.090 Sum_probs=46.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
|.+|.-+.+....+.+.+.|.|........ -.-.|+|...+...+.. ...
T Consensus 2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~----~~~-------------------- 57 (94)
T d3d85d3 2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKD----RVF-------------------- 57 (94)
T ss_dssp CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------C----EEE--------------------
T ss_pred CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEE----ecc--------------------
Confidence 678888888776666789999998753211 12355665443332211 000
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 273 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 273 (612)
...++..|.|++.|.+||......+.+.||+.-
T Consensus 58 -~~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeWS 90 (94)
T d3d85d3 58 -TDKTSATVICRKNASISVRAQDRYYSSSWSEWA 90 (94)
T ss_dssp -ESSSEEEECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred -ccceEEEecCCCCEEEEEEEecCCCCCCCccCc
Confidence 001123588999999999987555556687754
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.22 E-value=0.023 Score=44.73 Aligned_cols=77 Identities=12% Similarity=0.120 Sum_probs=43.1
Q ss_pred CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEE
Q 007233 179 TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTY 256 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Y 256 (612)
..++++|+|....... -..-.|+|...+...+. ...+. ......+|+||+|++.|.+
T Consensus 12 ~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d2dn7a1 12 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPN----TIDFG-----------------KDDQHFTVTGLHKGTTYIF 70 (94)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCE----EEEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred eCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcE----EEEcC-----------------CCccEEEEEccCCeeEEEE
Confidence 4689999999764311 11234566554433221 11111 1123457899999999999
Q ss_pred EEeeecCCCCccccceEEEEc
Q 007233 257 KVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 257 rvg~~~~dg~~~~S~~~~F~T 277 (612)
||......|...+|+ ..+.|
T Consensus 71 ~V~A~n~~G~g~~s~-~~~~T 90 (94)
T d2dn7a1 71 RLAAKNRAGLGEEFE-KEIRT 90 (94)
T ss_dssp EEEEEETTEEEEEEE-EEEEC
T ss_pred EEEEEcCCcCCCCcc-EEEee
Confidence 998764344333343 34455
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.11 E-value=0.0035 Score=52.41 Aligned_cols=94 Identities=12% Similarity=0.023 Sum_probs=57.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCC----CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYG----INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
|.+|..+.+....+.++|.|+|..... .......+.|....+.... .... . -.+-..
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~-----~~~~-----~---------~~~~~~ 71 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV-----AEVI-----F---------PTADST 71 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEE-----EEEC-----C---------TTCSEE
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccc-----eeee-----e---------ecccee
Confidence 456666666554557899999986321 1123456778653221110 0000 0 012345
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.++|+||+|++.|.+||......|...+|+.-.++|.
T Consensus 72 ~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~ 108 (117)
T d2cspa1 72 AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPE 108 (117)
T ss_dssp EEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCHH
T ss_pred eeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeCC
Confidence 6789999999999999997766666667777666653
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.08 E-value=0.21 Score=47.54 Aligned_cols=193 Identities=15% Similarity=0.084 Sum_probs=103.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCccEEEEeCcccccCCc---hhHHHHHHHhhhhhhcCCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~---~~~wd~f~~~i~~l~s~vP 361 (612)
..|++++||.=-.. .... .+.+.++.++ .++||||..|-++ +.|. ....+++++. .+-
T Consensus 4 ~MkILfiGDIvG~~----------GR~~v~~~Lp~Lr~~-~~iDfVIaNgENa-a~G~Git~k~~~eL~~~------GvD 65 (281)
T d1t71a_ 4 SIKFIFLGDVYGKA----------GRNIIKNNLAQLKSK-YQADLVIVNAENT-THGKGLSLKHYEFLKEA------GVN 65 (281)
T ss_dssp CCEEEEECEEBHHH----------HHHHHHTTHHHHHHH-HTCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCC
T ss_pred cceEEEEEccCCHH----------HHHHHHHHhHHHHHH-hCCCEEEECCccC-CCCcCCCHHHHHHHHHh------CCc
Confidence 47999999982110 0111 1233444443 5799999999999 5554 2233333322 344
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeec----CCCCCCceEEEEEeCCEEEEEEeCCC--CCCC--CHHH
Q 007233 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV----PAENRAKFWYSTDYGMFRFCVADTEH--DWRE--GTEQ 433 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~----P~~~~~~~~Ysfd~G~v~fi~Ldt~~--~~~~--~~~Q 433 (612)
+ .+.|||=++..+.-.+... .... -.-.++ |....++-|..++.++-.+.+++-.. ...+ -...
T Consensus 66 v-IT~GNH~wd~kei~~~i~~---~~~l----lRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~p 137 (281)
T d1t71a_ 66 Y-ITMGNHTWFQKLDLAVVIN---KKDL----VRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP 137 (281)
T ss_dssp E-EECCTTTTCCGGGHHHHTT---CTTE----ECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH
T ss_pred E-EEcCchhhhchhhHHHHhh---cccc----cccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHH
Confidence 4 5789998764322111110 0000 011123 32344666888888876776666431 1111 1223
Q ss_pred HHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccce
Q 007233 434 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI 513 (612)
Q Consensus 434 ~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~ 513 (612)
.+-+++.+.. .+.+.+||=+|.=- +| | +.-.-.+.+-+|.+|+-=|+|.-. .+.+
T Consensus 138 f~~~~~~~~~---~~~d~i~VDfHaEA--TS-----------E----K~A~g~~lDGrvsaVvGTHTHV~T-----aD~r 192 (281)
T d1t71a_ 138 FKVLKELILK---RDCDLHIVDFHAET--TS-----------E----KNAFCMAFDGYVTTIFGTHTHVPS-----ADLR 192 (281)
T ss_dssp HHHHHHHHTT---CCCSEEEEEEECSC--HH-----------H----HHHHHHHHTTTSSEEEEESSSSCC-----TTCE
T ss_pred HHHHHHhhcc---cCCCeEEEEeccch--hh-----------h----hhhheeeeCCcEEEEEecCccccc-----Cccc
Confidence 3334444443 46677888888431 00 1 222344557899999999999832 1222
Q ss_pred eccCCCccccCCCCceEEEE-eCCCCC
Q 007233 514 CTNKEKNYYKGTLNGTIHVV-AGGGGA 539 (612)
Q Consensus 514 ~~~~~~~~y~~~~~g~vyiv-~G~gG~ 539 (612)
+. ++||-|++ .|+.|.
T Consensus 193 IL----------p~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 193 IT----------PKGSAYITDVGMCGP 209 (281)
T ss_dssp EC----------TTSCEEESCCCEEBC
T ss_pred cc----------cCCeEEEecCccccC
Confidence 21 36888876 677775
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.96 E-value=0.021 Score=45.62 Aligned_cols=79 Identities=22% Similarity=0.199 Sum_probs=40.3
Q ss_pred eecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCC
Q 007233 174 LAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWP 250 (612)
Q Consensus 174 La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P 250 (612)
|....+.+++.|+|..+...... .-.|+|....+.... ....+ .+-....+|.+|+|
T Consensus 11 l~v~~~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~--~~~~~------------------~~~~~~~~l~~L~p 70 (100)
T d2gysa4 11 LQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD--SKTET------------------LQNAHSMALPALEP 70 (100)
T ss_dssp EEEC---CCCEEEEEC--------CEEEEEEEECSSSCSTT--SCEEE------------------EESCSEEECCCCCS
T ss_pred cEEEECCCEEEEEEecCcccCCccceEEEEEEeecccceec--eeecc------------------cCCceEEEeCCCCC
Confidence 44555567899999876532111 245566543322111 00011 01124678999999
Q ss_pred CCEEEEEEeeecCCC--Cccccce
Q 007233 251 NAMYTYKVGHRLFNS--TYIWSSE 272 (612)
Q Consensus 251 ~t~Y~Yrvg~~~~dg--~~~~S~~ 272 (612)
|+.|.+||.....+| .+.||+.
T Consensus 71 ~t~Y~~rVRa~~~~g~~~g~WSeW 94 (100)
T d2gysa4 71 STRYWARVRVRTSRTGYNGIWSEW 94 (100)
T ss_dssp SCCCEEEEEEEECCTTCCBCCCCC
T ss_pred CCeEEEEEEEEECCCCCCCCccCC
Confidence 999999998764333 2355543
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.94 E-value=0.067 Score=42.99 Aligned_cols=83 Identities=14% Similarity=0.036 Sum_probs=45.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+........++|+++|..+.+.. +..-.+.|............. .... .. ........+.
T Consensus 5 P~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~-~~~~-----~~-------~~~~~~~~~~ 71 (107)
T d1cd9b1 5 PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDT-IPDC-----VA-------KKRQNNCSIP 71 (107)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCE-EEEE-----EC-------CTTCCEEEEE
T ss_pred cCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeee-eeee-----cc-------ccCccccEEE
Confidence 34555554222334689999998765422 123455565433221111000 0000 00 1123456788
Q ss_pred ecCCCCCCEEEEEEeee
Q 007233 245 LKELWPNAMYTYKVGHR 261 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~ 261 (612)
+++|+|++.|.+||...
T Consensus 72 ~~~L~~~t~Y~frV~A~ 88 (107)
T d1cd9b1 72 RKNLLLYQYMAIWVQAE 88 (107)
T ss_dssp GGGCCTTSCEEEEEEEE
T ss_pred cCCCCcCceEEEEEEEE
Confidence 99999999999999875
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.70 E-value=0.037 Score=44.59 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=46.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.- .+.+++.|.|......+. ..-.|+|...+.... ...... ++-...
T Consensus 10 vP~~p~~l~~~~-~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~---~~~~~~-----------------~~~~~~ 68 (106)
T d1wfna1 10 VPGPVGHLSFSE-ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 68 (106)
T ss_dssp SCCCCSCCEEES-CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCcCCCCcEEEE-ecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcc---eEEEec-----------------CCCeeE
Confidence 355666666432 246899999986543110 123355544322111 000000 122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCcccc
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWS 270 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 270 (612)
.+|+||+|+++|.+||......|.+.+|
T Consensus 69 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 96 (106)
T d1wfna1 69 YRVTGLTALTTYTIEVAAMTSKGQGQVS 96 (106)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEE
T ss_pred EEEccCCCCCEEEEEEEEECCCCCcCCc
Confidence 6789999999999999865333433333
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.99 E-value=0.2 Score=40.86 Aligned_cols=35 Identities=11% Similarity=-0.148 Sum_probs=26.3
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+.+|+|+++|.+||......|...+|+.-.+.+.
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~ 109 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRI 109 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEecc
Confidence 45689999999999997655566677877666443
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.97 E-value=0.0085 Score=48.54 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=53.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+..|..+..... +.+++.|+|..... .....+.|...-........ ..+.. ....+..+...|
T Consensus 5 ~d~P~~v~~~~~-~~~sv~l~W~pP~~--~ng~i~~Y~v~y~~~~~~~~--~~~~~------------~~~~~~~~~~~~ 67 (102)
T d2dtge1 5 DDIVGPVTHEIF-ENNVVHLMWQEPKE--PNGLIVLYEVSYRRYGDEEL--HLCDT------------RKHFALERGCRL 67 (102)
T ss_dssp CCCCCCCCCCSS-SSSCCCCCCCCCCS--CSSCEEEECCCCBSSSBCCC--CCCCC------------SSSCCCTTCCCC
T ss_pred CCCCCCCEEEEE-CCCEEEEEEEeCCC--CcceEEEeeeEEEecCCCCc--eeeee------------eecccceEEEEE
Confidence 345555543222 36899999986543 23356777542110000000 00000 011233455678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+|+|++ |.+||......|.+.||+.-.|.|+
T Consensus 68 ~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 68 RGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred eccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 9999975 9999987655566678988899884
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=92.70 E-value=0.12 Score=41.40 Aligned_cols=75 Identities=15% Similarity=0.066 Sum_probs=41.9
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++.. .+.++++|+|....... -..-.|+|...+..... ..... ..+.....
T Consensus 7 ~P~~v~~~~-~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~---~~~~~----------------~~~~~~~~ 66 (105)
T d1cfba2 7 NPDNVVGQG-TEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAW---ENNNI----------------FDWRQNNI 66 (105)
T ss_dssp CCSCCEEEC-SSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCC---EEEEE----------------CCTTCCEE
T ss_pred CCcCeEEEE-ccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccce---eEEEe----------------cCCCccEE
Confidence 566666543 34789999997421100 11234566544322110 00000 12234567
Q ss_pred EecCCCCCCEEEEEEeeec
Q 007233 244 FLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~ 262 (612)
+|++|+|++.|.+||....
T Consensus 67 ~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 67 VIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp EECSCCSSCEEEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEEEe
Confidence 8999999999999998753
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.60 E-value=0.076 Score=43.94 Aligned_cols=41 Identities=15% Similarity=-0.033 Sum_probs=28.8
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC-----ccccceEEEEcC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNST-----YIWSSEYQFKAS 278 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-----~~~S~~~~F~T~ 278 (612)
+.....+|+||+|+|+|.++|..-...|. +..|+...|+|.
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred CccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 44566789999999999999986432332 235666677763
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.54 E-value=0.14 Score=40.18 Aligned_cols=37 Identities=11% Similarity=-0.051 Sum_probs=26.8
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 275 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 275 (612)
......+.+|.|++.|++||......|...|++.-.|
T Consensus 55 ~~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws~s~~f 91 (98)
T d1fyhb1 55 HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEF 91 (98)
T ss_dssp SEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCCB
T ss_pred ceeeeEecccCCCCEEEEEEEEEcCCcccCCccCCCc
Confidence 4455678999999999999998654555566654444
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.48 E-value=0.33 Score=37.79 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=41.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|.-+++..- +.++|+++|.-+.+.. ...-.|+|...++.... .... + .+--...+
T Consensus 4 P~~P~n~~~~~~-~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~-----~~~~--------~-------~~~~~~~~ 62 (95)
T d1bqua1 4 PEKPKNLSCIVN-EGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----CKAK--------R-------DTPTSCTV 62 (95)
T ss_dssp CCCCEEEEEEEE-TTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----EECC--------S-------SCTTEEEC
T ss_pred cCCCeeeEEEEc-cCCEEEEEEeCcccCCCceEEEEEEEEcccceeE-----eecc--------c-------ccceeeee
Confidence 455655655433 4688999999865421 12345555443221110 0000 0 01112235
Q ss_pred ecCCCCCCEEEEEEeee
Q 007233 245 LKELWPNAMYTYKVGHR 261 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~ 261 (612)
+.+|+|++.|++||...
T Consensus 63 ~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 63 DYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp SSCCCTTSCEEEEEEEE
T ss_pred eeecCCCcEEEEEEEEE
Confidence 68999999999999875
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.70 E-value=0.59 Score=45.52 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=20.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHV 500 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~ 500 (612)
+.+.++..++++++++++=||.
T Consensus 232 G~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 232 GPDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp CHHHHHHHHHHHTCCEEEECCS
T ss_pred CHHHHHHHHHHcCCcEEEEcCc
Confidence 4789999999999999999997
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.01 E-value=0.67 Score=44.41 Aligned_cols=24 Identities=8% Similarity=0.105 Sum_probs=20.8
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..++++++++++=||.=.
T Consensus 216 g~~~~~~Fl~~n~l~~IIR~He~~ 239 (288)
T d3c5wc1 216 GQDISETFNHANGLTLVSRAHQLV 239 (288)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCC
T ss_pred CHHHHHHHHHHCCCcEEEcCCCcC
Confidence 477899999999999999998743
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=86.21 E-value=0.82 Score=43.85 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=21.2
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.++++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 223 GAEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCC
T ss_pred CHHHHHHHHHHCCCCEEEEcCccc
Confidence 478999999999999999999743
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.75 E-value=0.4 Score=40.99 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=28.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p 279 (612)
...+|+||+|+|.|.++|.....+|... .+..-.|+|.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 4577999999999999998653333322 35567788876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.03 E-value=0.36 Score=38.24 Aligned_cols=86 Identities=16% Similarity=0.106 Sum_probs=49.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
+|..++|...+ ..++|.|..+.+.. ...-.|||...+...+..... |.. ...--....+.
T Consensus 6 ~P~nv~~~s~n--~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~---------c~~--------~t~~~~~~~~~ 66 (99)
T d1y6kr1 6 SPPSVWFEAEF--FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQ---------CSQ--------TLSYDLTAVTL 66 (99)
T ss_dssp CCSCEEEEEET--TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEE---------EES--------SSEEECGGGGT
T ss_pred CCCcceEEEEC--CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEe---------ecc--------ccccceeeeee
Confidence 46677765444 57999997543311 124677887655444432111 100 00000112367
Q ss_pred CCCCCCEEEEEEeeecCCCCccccce
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSE 272 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~ 272 (612)
+|.++..|++||......|...|++.
T Consensus 67 ~l~~~~~Y~fRVrA~n~~g~S~Ws~t 92 (99)
T d1y6kr1 67 DLYHSNGYRARVRAVDGSRHSQWTVT 92 (99)
T ss_dssp TGGGSSCEEEEEEEEETTEECCCEEC
T ss_pred ecCCCCEEEEEEEEEcCCCcCCCccc
Confidence 99999999999998765566667654
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.03 E-value=1.1 Score=45.48 Aligned_cols=26 Identities=8% Similarity=0.024 Sum_probs=22.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCcccce
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+.+++...++++++++++=||.=.-+
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~ 273 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDA 273 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhh
Confidence 46899999999999999999986533
|