Citrus Sinensis ID: 007236

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
cccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHHccccccccccEEEEEEEEccEEEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccccEEEEcccccccccccccccccccEEEEEEEEEEcccccccccccccEEEEEccccEEEEEEcccccccccccccccccccccccccccccccEEEcccccEEEEEccEEEEccEEEEEEEEcccccEEEEEEEEEcccccEEEEEEEEEEEEEEEEcccccHHHHHHEEEEccccccccccccccccccccccEEEEEEEEEccccccEEEccEEEEEEEEcccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEcEEEEEEEEEEEEEEEEEEEEcccccccccccccEEccccccccccEEEEEEEEccccccccEEEEEEEEEEEccccccccccEEEEEEEEEEcHHHHHHHccccccEEEEEcccccccccccEEEEEEEccccccccccccHHHHccccccccEEEEEcccccccccccccccccccccccccccc
ccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEccccHHHHHHHHHcHHHcccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEcccccccccccccccccEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEEccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHH
MAAAPSQTILFIILLHIFYIfvpshqyhpldsltpsefSQIRSIVTkaypessthkltfqyvgleepskQTVISWLknetttnpprqAFVIARIDHQTHELIVDLSLQEIASKRiysgygypmftfedqenadklaftyppfVASIRRRGLKLEEVVCESfsvgwygaeeeegknkKRIVKVMCYYMNgtvnlfmrpiegismtvdldemkiigfqdrvtvpvpkadetefreskikppfrqsLKAITvvqpdgpsftidghmirWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFfdageygyglcsmtleplrdcppnavfmdayfskqdgmprkipKAFCIFERYAGDImwrhteatipgktvreVRQDVSLVVRTVStfgnydyvndwefkqsgsIKVTVGLTGMvqvrgttythkdhmeedvygTLVAENSIAIHHDHFLTYrldldvdgdansFVRSKLrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgnligyrlipegvtgallssddhpqirAAFTNYNVWVTAYNksekwagglyadqshgddtlAVWSNR
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTkaypesstHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESfsvgwygaeeeegknkkriVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIgfqdrvtvpvpkadetefreskikppfrqslkaitvvqpdgpsFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYfskqdgmprKIPKAFCIFERYAGDIMWRHTeatipgktvrevrqdVSLVVRTvstfgnydyvndwefKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDAnsfvrsklrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGlyadqshgddtlAVWSNR
MAAAPSQTilfiillhifyifVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
*******TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWY***********RIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPV*******************SLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVR******************************************LLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQ*************
*****SQ*ILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEF********************PDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKL***************************DARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
***APSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query611 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.977 0.885 0.514 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.977 0.895 0.511 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.947 0.813 0.450 1e-149
P46883757 Primary amine oxidase OS= N/A no 0.921 0.743 0.314 3e-77
P80695752 Primary amine oxidase OS= yes no 0.921 0.748 0.321 3e-75
P49250755 Primary amine oxidase OS= yes no 0.923 0.747 0.318 4e-74
Q07123648 Copper methylamine oxidas N/A no 0.909 0.858 0.272 3e-55
Q07121648 Primary amine oxidase OS= N/A no 0.909 0.858 0.272 4e-55
Q59118684 Histamine oxidase OS=Arth N/A no 0.913 0.815 0.278 1e-54
P12807692 Peroxisomal primary amine N/A no 0.905 0.799 0.256 2e-43
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/604 (51%), Positives = 434/604 (71%), Gaps = 7/604 (1%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
           ++L ++  H      P H  HPLD LT  EF  +++IV   YP S+ ++L F Y+GL++P
Sbjct: 13  SVLTLLSFHAVVSVTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISN-NRLAFHYIGLDDP 71

Query: 68  SKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFE 127
            K  V+ +  + T  + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + +
Sbjct: 72  EKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVD 131

Query: 128 DQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYM 187
           +Q  A KL   YPPF+ S+++RGL L E+VC SF++GW+G E+       R V++ C+  
Sbjct: 132 EQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMK 186

Query: 188 NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAI 247
             TVN+++RPI GI++  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++
Sbjct: 187 ESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSL 246

Query: 248 TVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSE 307
           T  QP GP F I+GH + WA+W+FH+ FDVRAG++ISLASIYDLEK +SRRVLYKG++SE
Sbjct: 247 TSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISE 306

Query: 308 MFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIP 367
           +FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  + 
Sbjct: 307 LFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLK 366

Query: 368 KAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGS 427
            A C+FE+Y G+IMWRHTE  IP +++ E R +V+L+VRT+ T GNYD V DWEFK SGS
Sbjct: 367 NAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGS 425

Query: 428 IKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANS 487
           IK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NS
Sbjct: 426 IKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNS 485

Query: 488 FVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNL 547
           F ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN 
Sbjct: 486 FEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNE 545

Query: 548 IGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAV 607
           +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAV
Sbjct: 546 VGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAV 605

Query: 608 WSNR 611
           W+ +
Sbjct: 606 WTKQ 609

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P12807|AMO_PICAN Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
224108047673 predicted protein [Populus trichocarpa] 0.955 0.867 0.691 0.0
255551473689 Amine oxidase [copper-containing] precur 0.981 0.870 0.671 0.0
224102055668 predicted protein [Populus trichocarpa] 0.983 0.899 0.653 0.0
225432644676 PREDICTED: primary amine oxidase [Vitis 0.945 0.855 0.664 0.0
225432636674 PREDICTED: primary amine oxidase [Vitis 0.949 0.860 0.642 0.0
147832635 1265 hypothetical protein VITISV_040530 [Viti 0.945 0.456 0.648 0.0
449492626678 PREDICTED: LOW QUALITY PROTEIN: primary 0.980 0.883 0.603 0.0
449444246681 PREDICTED: primary amine oxidase-like [C 0.980 0.879 0.595 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.949 0.869 0.619 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.900 0.854 0.607 0.0
>gi|224108047|ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/590 (69%), Positives = 486/590 (82%), Gaps = 6/590 (1%)

Query: 23  PSHQ-YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETT 81
           P+HQ  HPLDSLTP+EFS+IR+IV  +YP  S H   F YVGLE+P+K TV+SWLK+ TT
Sbjct: 21  PTHQRQHPLDSLTPAEFSKIRAIVHSSYPIPS-HTTAFHYVGLEDPNKLTVLSWLKDPTT 79

Query: 82  TNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPP 141
             PPRQAFVIARI+  THE+ VDL++ +I S ++Y GYGYP+ TFE+Q  A+ L   Y P
Sbjct: 80  KTPPRQAFVIARINQTTHEITVDLTINKIVSDKLYDGYGYPLLTFEEQIAANALPLKYAP 139

Query: 142 FVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGI 201
           F+ SIR+RGLK+EEVVC  F+VGWYG E    + KKRIV+VMCYY++GTVN +MRP+EG+
Sbjct: 140 FLESIRKRGLKIEEVVCGGFTVGWYGEE----RRKKRIVRVMCYYLDGTVNAYMRPVEGV 195

Query: 202 SMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDG 261
           ++TVDL+E KIIGF+DR+TVP+PK D T++R SK  PPF   LK IT+VQPDGPSFTIDG
Sbjct: 196 TVTVDLEETKIIGFKDRLTVPIPKGDGTDYRGSKQNPPFLAQLKGITMVQPDGPSFTIDG 255

Query: 262 HMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQR 321
           H IRWA+W+FHLSFD RAG IISLASI+DL+KQ+ R+VLYKG VSE+FVPYMDLTEEW  
Sbjct: 256 HRIRWANWDFHLSFDSRAGPIISLASIFDLQKQKFRQVLYKGFVSELFVPYMDLTEEWYY 315

Query: 322 RTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIM 381
           RTFFDAGEYGYGLC++ LEP RDCP NAVFMDAYF+ Q+GMP  +P  FCIFE+YAGDI 
Sbjct: 316 RTFFDAGEYGYGLCAVPLEPFRDCPENAVFMDAYFAGQNGMPVNMPDVFCIFEKYAGDIT 375

Query: 382 WRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVR 441
           WRHTE   PG+ +REVR +V+LVVR VST GNYDY+NDWEFKQSGSIKVTVGLTG+++VR
Sbjct: 376 WRHTETLKPGEEIREVRPEVTLVVRMVSTVGNYDYINDWEFKQSGSIKVTVGLTGLLEVR 435

Query: 442 GTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDR 501
           G+ YTH D ++E+VYGTL+AEN++  HHDHFLTY LDLDVDGDANS V+S L+ TRV D+
Sbjct: 436 GSVYTHNDQIKEEVYGTLLAENTVGAHHDHFLTYHLDLDVDGDANSLVKSNLQMTRVADQ 495

Query: 502 RSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGAL 561
            S RKSYW V S+TAKTESDARI+LG E A+LL VNPNK+T +GN IGYRLIP  +T  +
Sbjct: 496 MSPRKSYWRVVSETAKTESDARIRLGVEQADLLVVNPNKRTDLGNSIGYRLIPGSLTHPV 555

Query: 562 LSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611
           LS DD+ QIR AFT YNVWVT YNKSEKWAGGLYADQS GDDTLA WS R
Sbjct: 556 LSDDDYSQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDTLARWSLR 605

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255551473|ref|XP_002516782.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543870|gb|EEF45396.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432644|ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737038|emb|CBI26239.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832635|emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449492626|ref|XP_004159052.1| PREDICTED: LOW QUALITY PROTEIN: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444246|ref|XP_004139886.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.950 0.853 0.543 8.5e-184
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.947 0.855 0.557 1.1e-183
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.952 0.863 0.528 6.5e-177
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.918 0.757 0.544 2.7e-171
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.932 0.876 0.504 7.3e-162
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.942 0.777 0.456 9.2e-139
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.947 0.813 0.451 1.1e-137
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.947 0.842 0.434 2.5e-136
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.919 0.742 0.322 1.5e-76
TAIR|locus:2139039460 AT4G12270 [Arabidopsis thalian 0.585 0.778 0.421 2.1e-75
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1783 (632.7 bits), Expect = 8.5e-184, P = 8.5e-184
 Identities = 320/589 (54%), Positives = 438/589 (74%)

Query:    28 HPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLK--NETTTNPP 85
             HP D LT +E   +R+I+ K+YP    HK TFQYVGL EP+K  V+SW    N T   PP
Sbjct:    28 HPFDPLTETELKLVRTIINKSYPVGPNHKFTFQYVGLNEPNKSLVLSWYSSPNHTIKPPP 87

Query:    86 RQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVAS 145
             RQAFVIAR + +T E+++D S + I S +I+ G GYPM + ++QE + +L   + PF+ S
Sbjct:    88 RQAFVIARDNGKTREIVLDFSSRAIVSDKIHVGNGYPMLSNDEQEASTELVVKFKPFIDS 147

Query:   146 IRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTV 205
             + +RGL + E+V  + ++GWYG  + E +   R++++M +Y++GTVN+++RPIEG+++ V
Sbjct:   148 VAKRGLNVSEIVFTTSTIGWYGETKAEAE---RVIRLMPFYLDGTVNMYLRPIEGMTIIV 204

Query:   206 DLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIR 265
             +LDEMK+  F+DR  V +P A+ TE+R SK+ PPF  +L    ++QPDGP F +DGH++R
Sbjct:   205 NLDEMKVSEFKDRSVVTMPIANGTEYRISKLNPPFGPTLHNAVLLQPDGPGFKVDGHIVR 264

Query:   266 WADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFF 325
             WA+WEFH+SFDVRAG++ISLAS++D +  + R+VLYKGH+SEMF+PYMD +++W   T+ 
Sbjct:   265 WANWEFHISFDVRAGIVISLASLFDTDVNKYRQVLYKGHLSEMFIPYMDPSDDWYFITYL 324

Query:   326 DAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHT 385
             D G++G G C+++L+P  DCP  AVFMD  F+ QDG P KIPK  CIFE+YAGDIMWRHT
Sbjct:   325 DCGDFGCGQCAVSLQPYTDCPAGAVFMDGIFAGQDGTPAKIPKVMCIFEKYAGDIMWRHT 384

Query:   386 EATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTY 445
             EA IP   + EVR DVSLV R V+T GNYDY+ D+EFK SGSIK+ VGLTG+++V+   Y
Sbjct:   385 EAEIPNLEITEVRPDVSLVARIVTTVGNYDYIVDYEFKPSGSIKMGVGLTGVLEVKPVEY 444

Query:   446 THKDHME--EDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRV-NDRR 502
              H   ++  ED++GT+VA+N++ ++HDHF+T+RL LD+DG  NSFVR++L TTR      
Sbjct:   445 IHTSEIKLGEDIHGTIVADNTVGVNHDHFVTFRLHLDIDGTENSFVRNELVTTRSPKSVN 504

Query:   503 SSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALL 562
             + RK+YWT   KTAKTE++AR+KLG +  EL+ VNPN+KTK GN +GYRL+     G LL
Sbjct:   505 TPRKTYWTTKPKTAKTEAEARVKLGLKAEELVVVNPNRKTKHGNEVGYRLLHGSAAGPLL 564

Query:   563 SSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611
             + DD PQIRAAFTNYNVW+T YN+SE WAGGLYAD+S GDDTLAVWS R
Sbjct:   565 AQDDFPQIRAAFTNYNVWITPYNRSEVWAGGLYADRSQGDDTLAVWSQR 613
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139039 AT4G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.51150.97700.8950N/Ano
Q43077AMO_PEA1, ., 4, ., 3, ., 2, 10.51490.97700.8857N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.914
3rd Layer1.4.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-142
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-137
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-125
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-101
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 5e-24
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 1e-20
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  745 bits (1924), Expect = 0.0
 Identities = 326/608 (53%), Positives = 425/608 (69%), Gaps = 18/608 (2%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
            I  + L+ I      +  YHPLD L P E ++IR IV K++   +   LTF ++ LEEP
Sbjct: 2   NIPILALVFILQCCFVASLYHPLDPLNPQEINKIRLIVQKSH-LGNLPNLTFHFLDLEEP 60

Query: 68  SKQTVISWLK--NETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFT 125
            K+ V+ WL       + PPR+A V+ R   +T+ELIVDL+   I S R+Y+G+GYP  T
Sbjct: 61  EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120

Query: 126 FEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCY 185
           F +   A KL   YP F  SI RRGL + EV C  F+VGWYG         KR +K+ C+
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGET-----VTKRALKISCF 175

Query: 186 YMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLK 245
           Y  G+VN+F RPIEGIS+ +D+D M+II + DR   P+PKA+ T+FR       F     
Sbjct: 176 YRGGSVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTKHKPFSF----- 230

Query: 246 AITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHV 305
               V   G  FTI GH ++WA+W+FH+ FD RAG+ IS AS++D + ++ RRVLY+GHV
Sbjct: 231 -PCNVSDSG--FTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHV 287

Query: 306 SEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRK 365
           SE FVPYMD T EW  RTF D GE+G+G  ++TL+PL DCP NAV++D Y +  DG  +K
Sbjct: 288 SETFVPYMDPTSEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQK 347

Query: 366 IPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQS 425
           +    CIFERY+GD+ +RHTE  +PG+ +R    ++SLVVR V+T GNYDY+ DWEFK+S
Sbjct: 348 MTNVICIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKS 407

Query: 426 GSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDA 485
           GSIKV V LTG+++++ T+YT+ D + +DVYGTLVAEN+IA++HDHFLTY LDLDVDG+ 
Sbjct: 408 GSIKVGVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNG 467

Query: 486 NSFVRSKLRTTRVN--DRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTK 543
           NSFV++KL+T RV   +  S RKSYWTV  +TAKTE++ RI+LGSEPAELL VNPNKKTK
Sbjct: 468 NSFVKAKLQTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTK 527

Query: 544 MGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD 603
           +GN +GYRLI      +LLS DD+PQIRAA+T Y VWVTAYNKSE+WAGG YAD+S GDD
Sbjct: 528 LGNQVGYRLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDD 587

Query: 604 TLAVWSNR 611
            LAVWS+R
Sbjct: 588 GLAVWSSR 595

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 611
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.87
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.78
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.2e-167  Score=1388.82  Aligned_cols=564  Identities=32%  Similarity=0.559  Sum_probs=528.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEe--CCeeEEEE
Q 007236           25 HQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHELI  102 (611)
Q Consensus        25 ~~~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~--~~~~~E~v  102 (611)
                      ...|||||||++||++|++|||++.+.  .++++|.+|+|.||+|++|++|+.++   +++|+|+|++++  .+.++|++
T Consensus        11 ~~~HPLdpLt~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~~~~g~---~~~R~a~v~~~~~~~~~~~e~v   85 (647)
T PRK11504         11 AVSHPLDPLTAAEIEAAVAILRAEGLL--GESTRFVSIELAEPPKAEVLAFDPGD---PIDRRAFVVLYDRATGKTYEAV   85 (647)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcccc--CCceEEEEeeccCCCHHHHHhhhcCC---CCCcEEEEEEEECCCCcEEEEE
Confidence            456999999999999999999998763  15889999999999999999999975   247999999996  56799999


Q ss_pred             EeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcceEEccccccccCCccccCCCCceEEE
Q 007236          103 VDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIVK  181 (611)
Q Consensus       103 V~L~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~~~~~~G~~~~~~~~~~~~~Rl~~  181 (611)
                      |||++++|++++.+++ +||+++.||+.+||++|++||.|++||+|||| ++++|.||||++|||+.+++.   ++|++|
T Consensus        86 VdL~~~~V~~~~~~~~-~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~---~~Rl~~  161 (647)
T PRK11504         86 VSLTAGEVVSWEEIPG-VQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEER---GRRLAR  161 (647)
T ss_pred             EECCCCEEEEEEECCC-ccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcC---CceEEE
Confidence            9999999999999874 69999999999999999999999999999999 578999999999998865433   689999


Q ss_pred             EEEEEe-cCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCCCccccCCCCCCCCCCCceeeCCCCCeeEEe
Q 007236          182 VMCYYM-NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTID  260 (611)
Q Consensus       182 ~~~f~~-~~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~  260 (611)
                      ++||+| ++++|+||||||||+++||++++||++|+|.+..|+|+.. .+|.++.+. +.|+++|||+|+||||+||+|+
T Consensus       162 ~~~~~r~~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v~  239 (647)
T PRK11504        162 GLAFVRADPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTVD  239 (647)
T ss_pred             EEEEEecCCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEEc
Confidence            999999 5789999999999999999999999999998877777765 599988774 6899999999999999999999


Q ss_pred             ceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCC
Q 007236          261 GHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLE  340 (611)
Q Consensus       261 g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~  340 (611)
                      |++|+||||+||+|||+|||||||||+|+|  .+++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|+
T Consensus       240 g~~V~W~~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~  317 (647)
T PRK11504        240 GNEVEWQKWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLE  317 (647)
T ss_pred             CCEEEECCcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCcccccccc
Confidence            999999999999999999999999999998  678899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccceeEEE
Q 007236          341 PLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDW  420 (611)
Q Consensus       341 ~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w  420 (611)
                      +||||||+|+|||+++.+++|+|++++|||||||+| +|+||||++++++..+++|   +++||||+|+|||||||||+|
T Consensus       318 lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~~v~r---~r~LVvr~I~TVgNYdYi~~w  393 (647)
T PRK11504        318 LGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSAEVRR---SRRLVISFFATVGNYDYGFYW  393 (647)
T ss_pred             cCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcEEEEe---ccEEEEEEEEecccccEEEEE
Confidence            999999999999999999999999999999999999 7899999999987655554   459999999999999999999


Q ss_pred             EEeeCccEEEEEeEeEeEEeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCC
Q 007236          421 EFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVND  500 (611)
Q Consensus       421 ~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~  500 (611)
                      +|||||+||+||+|||||++++..     +.++.+||++|+|+++|++|||+|||||||||||.+|||+++|++++|.. 
T Consensus       394 ~F~qdG~Ie~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~-  467 (647)
T PRK11504        394 YFYQDGTIEFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG-  467 (647)
T ss_pred             EEecCceEEEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC-
Confidence            999999999999999999997652     22346899999999999999999999999999999999999999999886 


Q ss_pred             CCCCCceeeEEEEEeecchhhHHhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccccccce
Q 007236          501 RRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNV  579 (611)
Q Consensus       501 ~~~p~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~l  579 (611)
                      ++||++++|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|||
T Consensus       468 ~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~l  547 (647)
T PRK11504        468 PDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHL  547 (647)
T ss_pred             CCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcE
Confidence            6899999999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCCCCCCCCCCCCCCCChhhhccC
Q 007236          580 WVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR  611 (611)
Q Consensus       580 wVT~y~~~E~~asg~y~~qs~g~~gl~~w~~r  611 (611)
                      |||+|+|+|+||||+|+|||.|++||+.|+++
T Consensus       548 wVT~y~d~E~~aag~y~~Qs~~~~gl~~~~~~  579 (647)
T PRK11504        548 WVTPYDPDERYAAGDYPNQSAGGDGLPAYIAA  579 (647)
T ss_pred             EEeccCCCccccCCCCcccCCCCCCHHHHhcC
Confidence            99999999999999999999999999999964

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
1w2z_A649 Psao And Xenon Length = 649 0.0
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 1e-78
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 1e-77
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 3e-77
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 4e-77
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 5e-77
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 1e-76
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 4e-45
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 2e-44
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 3e-44
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 6e-43
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 1e-42
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 2e-42
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 2e-42
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 5e-42
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 6e-42
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-40
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 1e-39
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 2e-39
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-39
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 2e-39
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 3e-39
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-38
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 1e-38
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 7e-26
3pgb_A 797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 2e-22
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 1e-20
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 2e-19
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 2e-19
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 2e-19
1n9e_A 787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 2e-17
1rky_A 747 Pplo + Xe Length = 747 2e-17
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/589 (52%), Positives = 426/589 (72%), Gaps = 7/589 (1%)
Query: 23  PSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTT 82
           P H  HPLD LT  EF  +++IV   YP  S ++L F Y+GL++P K  V+ +  + T  
Sbjct: 3   PLHVQHPLDPLTKEEFLAVQTIVQNKYP-ISNNRLAFHYIGLDDPEKDHVLRYETHPTLV 61
Query: 83  NPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPF 142
           + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + ++Q  A KL   YPPF
Sbjct: 62  SIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPF 121
Query: 143 VASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGIS 202
           + S+++RGL L E+VC SF++GW+G E+       R V++ C+    TVN+++RPI GI+
Sbjct: 122 IDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMKESTVNIYVRPITGIT 176
Query: 203 MTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGH 262
           +  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++T  QP GP F I+GH
Sbjct: 177 IVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGH 236
Query: 263 MIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRR 322
            + WA+W+FH+ FDVRAG++ISLASIYDLEK +SRRVLYKG++SE+FVPY D TEE+  +
Sbjct: 237 SVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFK 296
Query: 323 TFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMW 382
           TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  +  A C+FE+Y G+IMW
Sbjct: 297 TFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMW 355
Query: 383 RHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRG 442
           RHTE  IP +++ E R +V+L+VRT+ T GN D V DWEFK SGSIK ++ L+G+++++G
Sbjct: 356 RHTENGIPNESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKG 415
Query: 443 TTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRR 502
           T   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NSF ++ L+T R+ D  
Sbjct: 416 TNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGS 475
Query: 503 SSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALL 562
           S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN +GYRLIP      LL
Sbjct: 476 SKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLL 535
Query: 563 SSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611
           + DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAVW+ +
Sbjct: 536 TEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQ 584
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-153
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-153
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-144
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-142
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-126
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-122
1w7c_A 747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-122
3pgb_A 797 Putative uncharacterized protein; oxidoreductase, 1e-121
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query611
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A 747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A 797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 611
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-146
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-124
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-123
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-122
d1w7ca1 460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-110
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 7e-41
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 6e-32
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 8e-31
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 6e-29
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 4e-25
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 8e-23
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1e-20
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 7e-18
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  427 bits (1098), Expect = e-146
 Identities = 220/378 (58%), Positives = 287/378 (75%), Gaps = 1/378 (0%)

Query: 234 SKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEK 293
           SK  PPF     ++T  QP GP F I+GH + WA+W+FH+ FDVRAG++ISLASIYDLEK
Sbjct: 2   SKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEK 61

Query: 294 QQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMD 353
            +SRRVLYKG++SE+FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D
Sbjct: 62  HKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFID 121

Query: 354 AYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGN 413
            Y    +G P  +  A C+FE+Y   IMWRHTE  IP +++ E R +V+L+VRT+ T GN
Sbjct: 122 TYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGN 180

Query: 414 YDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFL 473
           YD V DWEFK SGSIK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF 
Sbjct: 181 YDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY 240

Query: 474 TYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAEL 533
            Y LD D+DG  NSF ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL
Sbjct: 241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAEL 300

Query: 534 LFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGG 593
           + VNPN KT +GN +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGG
Sbjct: 301 VVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGG 360

Query: 594 LYADQSHGDDTLAVWSNR 611
           LY D S GDDTLAVW+ +
Sbjct: 361 LYVDHSRGDDTLAVWTKQ 378
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query611
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.96
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.92
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.88
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.88
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.74
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.41
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 92.22
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=8.6e-121  Score=987.09  Aligned_cols=375  Identities=58%  Similarity=1.067  Sum_probs=353.5

Q ss_pred             CCCCCCCCCCCceeeCCCCCeeEEeceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCC
Q 007236          236 IKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDL  315 (611)
Q Consensus       236 ~~~~~r~~lkp~~i~QPeG~sf~v~g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp  315 (611)
                      +++++++++|||.|+||||+||+|+|++|+||+|+|+|+||+|||||||||+|+|+..+++|||+||+|||||+||||||
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            45677999999999999999999999999999999999999999999999999999557899999999999999999999


Q ss_pred             CccccccceeecCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEE
Q 007236          316 TEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVR  395 (611)
Q Consensus       316 ~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~  395 (611)
                      +++|++|+|||+||||+|.+|++|++|||||++|+|||+++.+++|+|++++|||||||+| +|++|||++++.++..++
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999 779999999998888888


Q ss_pred             eeeeceeEEEEEeeeecccceeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCCCCccccccceeccCccccccceeEEe
Q 007236          396 EVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTY  475 (611)
Q Consensus       396 ~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~  475 (611)
                      ++|++++||||+|+|||||||||+|+|||||+||+||+|||||++++......++.++..||++|+|+++|++|||+|||
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~  242 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY  242 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence            99999999999999999999999999999999999999999999876533222223356799999999999999999999


Q ss_pred             eeecCCCCCCCceEEEeEEEeecCCCCCCCceeeEEEEEeecchhhHHhhcCCCCcEEEEecCCCCCCCCCcceEEEecC
Q 007236          476 RLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPE  555 (611)
Q Consensus       476 RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~~~~~~~~~~tE~~a~~~~~~~~r~~~i~N~~~~N~~G~p~gYrl~p~  555 (611)
                      ||||||||.+|||+++|+++++++.+++|++..++++++++++|++|++.++.++|+|+|+|++++|++|+|+||||+|+
T Consensus       243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~  322 (441)
T d1w2za1         243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA  322 (441)
T ss_dssp             EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred             EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence            99999999999999999999998766777777778999999999999888877889999999999999999999999999


Q ss_pred             CccccCCCCCChhhhcccccccceEEeccCCCCCCCCCCCCCCCCCCCChhhhccC
Q 007236          556 GVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR  611 (611)
Q Consensus       556 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~~gl~~w~~r  611 (611)
                      +++++++.++|+..+||+||+||||||||+|+|+||||+|++|+.+++||+.|+++
T Consensus       323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~  378 (441)
T d1w2za1         323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQ  378 (441)
T ss_dssp             SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGG
T ss_pred             CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcC
Confidence            99999999999999999999999999999999999999999999999999999863
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure