Citrus Sinensis ID: 007247
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 611 | 2.2.26 [Sep-21-2011] | |||||||
| Q43784 | 608 | Granule-bound starch synt | N/A | no | 0.986 | 0.991 | 0.727 | 0.0 | |
| O82627 | 608 | Granule-bound starch synt | N/A | no | 0.990 | 0.995 | 0.723 | 0.0 | |
| Q00775 | 607 | Granule-bound starch synt | N/A | no | 0.990 | 0.996 | 0.719 | 0.0 | |
| Q42857 | 608 | Granule-bound starch synt | N/A | no | 0.988 | 0.993 | 0.717 | 0.0 | |
| Q9MAQ0 | 610 | Probable granule-bound st | yes | no | 0.993 | 0.995 | 0.692 | 0.0 | |
| Q43092 | 603 | Granule-bound starch synt | N/A | no | 0.916 | 0.928 | 0.727 | 0.0 | |
| Q8LL05 | 565 | Granule-bound starch synt | N/A | no | 0.906 | 0.980 | 0.708 | 0.0 | |
| P09842 | 603 | Granule-bound starch synt | N/A | no | 0.947 | 0.960 | 0.663 | 0.0 | |
| P0C585 | 606 | Granule-bound starch synt | no | no | 0.919 | 0.927 | 0.683 | 0.0 | |
| Q0DEV5 | 609 | Granule-bound starch synt | no | no | 0.924 | 0.927 | 0.680 | 0.0 |
| >sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/616 (72%), Positives = 514/616 (83%), Gaps = 13/616 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMA 55
MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT
Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ- 57
Query: 56 SKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA 115
SK A NG P+ I+CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+A
Sbjct: 58 SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMA 112
Query: 116 ANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 175
A GHRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K
Sbjct: 113 ARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEK 172
Query: 176 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235
VWGKT SKIYGPR G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPYGE+V F+AN
Sbjct: 173 VWGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIAN 232
Query: 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 295
DWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 233 DWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFI 292
Query: 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355
DGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+N
Sbjct: 293 DGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIIN 352
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 415
GMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQK
Sbjct: 353 GMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQK 412
Query: 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 475
GSDI AAI ++ NVQI++LGTGKK EKQ+E LE+LYP+KARGVAKFN+PLAHMI A
Sbjct: 413 GSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITA 472
Query: 476 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 535
GADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +D
Sbjct: 473 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKID 532
Query: 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 595
DVAA+ TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG
Sbjct: 533 SADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGT 592
Query: 596 DGEEIAPLAKENVATP 611
+GEEIAPLAKENV TP
Sbjct: 593 EGEEIAPLAKENVPTP 608
|
Responsible for the synthesis of amylose in reserve starch. Manihot esculenta (taxid: 3983) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 2 |
| >sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/614 (72%), Positives = 510/614 (83%), Gaps = 9/614 (1%)
Query: 1 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASK 57
MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A +
Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQ 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
+ + NG P I+CG G+N++FV EV PWSKTGGLGDV+GGLPPA+A N
Sbjct: 60 SRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGN 114
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVW
Sbjct: 115 GHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKVW 174
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT+SKIYGP G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPYGEDVVFVANDW
Sbjct: 175 GKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVANDW 234
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF DG
Sbjct: 235 HTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDG 294
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGM
Sbjct: 295 YEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGM 354
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
D QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGS
Sbjct: 355 DTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGS 414
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AAI F+ +VQII+LGTGKK E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGA
Sbjct: 415 DILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGA 474
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP
Sbjct: 475 DFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPA 534
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 597
DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DG
Sbjct: 535 DVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDG 594
Query: 598 EEIAPLAKENVATP 611
EEIAPLAKENVATP
Sbjct: 595 EEIAPLAKENVATP 608
|
Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/613 (71%), Positives = 511/613 (83%), Gaps = 8/613 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T
Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK-- 55
Query: 59 ATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG 118
T + A R + + G S IVCG G+N++FVGTEV PWSKTGGLGDVLGGLPPALAA G
Sbjct: 56 VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARG 114
Query: 119 HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178
HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVWG
Sbjct: 115 HRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKVWG 174
Query: 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238
KT SKIYGP+ G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPYGEDV+F+ANDWH
Sbjct: 175 KTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDWH 234
Query: 239 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 298
T+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY
Sbjct: 235 TALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGY 294
Query: 299 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358
KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGMD
Sbjct: 295 EKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMD 354
Query: 359 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 418
QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSD
Sbjct: 355 TQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSD 414
Query: 419 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478
IL AAI FI +VQI+VLGTGKK E+++EQLE+LYP KA+GVAKFN+PLAHMI AGAD
Sbjct: 415 ILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGAD 474
Query: 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
F+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP D
Sbjct: 475 FMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPAD 534
Query: 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE 598
V + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++GE
Sbjct: 535 VLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGE 594
Query: 599 EIAPLAKENVATP 611
EIAPLAKENVATP
Sbjct: 595 EIAPLAKENVATP 607
|
Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2 | Back alignment and function description |
|---|
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/615 (71%), Positives = 504/615 (81%), Gaps = 11/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K
Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK- 58
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
+NG ++ G + IVC G+N++FVG EV PW KTGGLGDVLGGLPPALAA
Sbjct: 59 -----PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAA 113
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL KV
Sbjct: 114 RGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKV 173
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT S +YGP+ G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPYGEDVVFVAND
Sbjct: 174 WGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVAND 233
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFID
Sbjct: 234 WHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFID 293
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI NG
Sbjct: 294 GYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNG 353
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKG
Sbjct: 354 MDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKG 413
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDIL AAI FI +VQI++LGTGKK E+Q+EQLE++YP+KARGVAKFN+PLAHMI AG
Sbjct: 414 SDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAG 473
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
ADF+LIPSRFEPCGLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP
Sbjct: 474 ADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDP 533
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 596
DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG++
Sbjct: 534 EDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVE 593
Query: 597 GEEIAPLAKENVATP 611
G+EIAPLAKENVATP
Sbjct: 594 GDEIAPLAKENVATP 608
|
Required for the synthesis of amylose. Ipomoea batatas (taxid: 4120) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/614 (69%), Positives = 502/614 (81%), Gaps = 7/614 (1%)
Query: 1 MATAVAASSFVSRSY---GHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ H +S + +K + + H GLRS N++D+LQ ++ A
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
++ + ++ IVC G++++F+G EV PWSKTGGLGDVLGGLPPALAA
Sbjct: 61 VSAKSSKRSSKVKTAG----KIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +G
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEG 596
Query: 598 EEIAPLAKENVATP 611
EEIAPLAKENVATP
Sbjct: 597 EEIAPLAKENVATP 610
|
Required for the synthesis of amylose in endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/573 (72%), Positives = 481/573 (83%), Gaps = 13/573 (2%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
GLRSLN L V+T + +S + ++ + IVCG+ L +FVG EV PWS
Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPP LA NGHRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 218
KRGVDRVFVDHP FL +VWGKT SK+YGP+TG DY+DNQLRFSLLCQAALEAPR+LNLNS
Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLNS 210
Query: 219 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED 278
+KYFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF D
Sbjct: 211 SKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSD 270
Query: 279 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338
F LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+G
Sbjct: 271 FSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRG 330
Query: 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398
VELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLPV
Sbjct: 331 VELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPV 390
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEK 458
D +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK MEKQ+E LE YP K
Sbjct: 391 DSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGK 450
Query: 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 518
A G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+EG
Sbjct: 451 AIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEG 510
Query: 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKK 578
+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK
Sbjct: 511 YTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKL 570
Query: 579 WEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 611
WE+ LLNLEV G+ GIDG+EIAPLAKENVATP
Sbjct: 571 WEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
|
May be responsible for the synthesis of amylose. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/559 (70%), Positives = 459/559 (82%), Gaps = 5/559 (0%)
Query: 54 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+A + AT+ + RN R+ S IVC G+ I+FV TEV PW KTGGLGDV+GGLPPA
Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPA 66
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
LAA GHRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL
Sbjct: 67 LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFL 126
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPYGE+VVFV
Sbjct: 127 EKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFV 186
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
ANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SFD
Sbjct: 187 ANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFD 246
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-G 352
F+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++ G
Sbjct: 247 FVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETG 306
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
IVNGMDV +WNP TDKYI VKY+A+TV A+ L KE LQAEVGL VD +IPVI FIGRLE
Sbjct: 307 IVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLE 366
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
EQKGSDIL AA P F++ENVQIIVLGTGKK ME++L LE+ YP+ ARG+AKFN+PLAHM
Sbjct: 367 EQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHM 426
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 532
+ AGADFI+IPSRFEPCGLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+ E
Sbjct: 427 MFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFE 486
Query: 533 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 592
VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS+
Sbjct: 487 TVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQ 546
Query: 593 PGIDGEEIAPLAKENVATP 611
PGI+GEEIAPLAK+NVATP
Sbjct: 547 PGIEGEEIAPLAKQNVATP 565
|
Involved in the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/585 (66%), Positives = 462/585 (78%), Gaps = 6/585 (1%)
Query: 31 KFRCMKHSGLRSLNIIDD-LQVKTMASKLA--TSRQAGRNGFRSQNGPSLMIVCGVGLNI 87
+FR GLR N D L ++T+ + A SR+A R R + ++ G G+N+
Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNL 78
Query: 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147
+FVG E+APWSKTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT V+ E+KV D
Sbjct: 79 VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVAD 138
Query: 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAA 207
+ E+VRFFHC+KRGVDRVF+DHPWFL KV GKT+ KIYGP G DY+DNQ RFSLLCQAA
Sbjct: 139 EYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAA 198
Query: 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHN 267
LEAPRILNLN+N YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIHN
Sbjct: 199 LEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHN 258
Query: 268 IAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 327
I+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+Y
Sbjct: 259 ISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYY 318
Query: 328 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387
A+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L K
Sbjct: 319 AEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNK 378
Query: 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEK 446
EALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK EK
Sbjct: 379 EALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEK 438
Query: 447 QLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 506
L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT + A
Sbjct: 439 LLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCA 498
Query: 507 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566
STGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M
Sbjct: 499 STGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCM 558
Query: 567 AQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 611
QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P
Sbjct: 559 IQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603
|
Required for the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P0C585|SSG1_ORYSA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/566 (68%), Positives = 449/566 (79%), Gaps = 4/566 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DASSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQ EAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQ---EAPRILNLNNNPYFKGT 220
Query: 226 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 285
YGEDVVFV NDWHT +P YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 221 YGEDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLS 280
Query: 286 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII 345
+FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG +G ELDNI+
Sbjct: 281 ERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIM 340
Query: 346 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405
R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR +P+I
Sbjct: 341 RLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLI 400
Query: 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 465
FIGRLEEQKG D++AAAIP ++ENVQI++LGTGKK EK L+ +E YP K R V KF
Sbjct: 401 AFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKF 460
Query: 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 525
N PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 461 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMG 520
Query: 526 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585
SVDC+ V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 521 RLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLG 580
Query: 586 LEVAGSEPGIDGEEIAPLAKENVATP 611
L VAGSEPG++GEEIAPLAKENVA P
Sbjct: 581 LGVAGSEPGVEGEEIAPLAKENVAAP 606
|
Required for the synthesis of amylose in endosperm. Oryza sativa (taxid: 4530) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q0DEV5|SSG1_ORYSJ Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/566 (68%), Positives = 449/566 (79%), Gaps = 1/566 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGT 223
Query: 226 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 285
YGEDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 224 YGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLS 283
Query: 286 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII 345
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+
Sbjct: 284 ERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIM 343
Query: 346 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405
R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I
Sbjct: 344 RLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLI 403
Query: 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 465
FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KF
Sbjct: 404 AFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKF 463
Query: 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 525
N PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 464 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMG 523
Query: 526 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585
SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 524 RLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLG 583
Query: 586 LEVAGSEPGIDGEEIAPLAKENVATP 611
L VAGS PGI+G+EIAPLAKENVA P
Sbjct: 584 LGVAGSAPGIEGDEIAPLAKENVAAP 609
|
Required for the synthesis of amylose in endosperm. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 611 | ||||||
| 375151860 | 611 | GBSSII-2 [Citrus sinensis] | 1.0 | 1.0 | 0.998 | 0.0 | |
| 375151864 | 618 | GBSSII-2 [Prunus persica] | 0.947 | 0.936 | 0.798 | 0.0 | |
| 182636946 | 615 | granule bound starch synthase Ib precurs | 0.973 | 0.967 | 0.779 | 0.0 | |
| 223029784 | 615 | granule-bound starch synthase [Nelumbo n | 0.995 | 0.988 | 0.760 | 0.0 | |
| 225466653 | 614 | PREDICTED: granule-bound starch synthase | 0.993 | 0.988 | 0.758 | 0.0 | |
| 197725528 | 615 | granule-bound starch synthase [Nelumbo n | 0.996 | 0.990 | 0.761 | 0.0 | |
| 170676395 | 614 | granule bound starch synthase Ib precurs | 0.967 | 0.962 | 0.766 | 0.0 | |
| 258489621 | 609 | granule-bound starch synthase 1 [Gossypi | 0.990 | 0.993 | 0.741 | 0.0 | |
| 211906484 | 609 | granule bound starch synthase [Gossypium | 0.990 | 0.993 | 0.738 | 0.0 | |
| 211906516 | 609 | granule bound starch synthase [Gossypium | 0.990 | 0.993 | 0.739 | 0.0 |
| >gi|375151860|gb|AFA36446.1| GBSSII-2 [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/611 (99%), Positives = 611/611 (100%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT 60
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIID+LQVKTMASKLAT
Sbjct: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDELQVKTMASKLAT 60
Query: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
Sbjct: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
Query: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
Sbjct: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
Query: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS
Sbjct: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240
Query: 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK
Sbjct: 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
Query: 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360
PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ
Sbjct: 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360
Query: 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 420
EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL
Sbjct: 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 420
Query: 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480
AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI
Sbjct: 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480
Query: 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540
LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA
Sbjct: 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540
Query: 541 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 600
AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI
Sbjct: 541 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 600
Query: 601 APLAKENVATP 611
APLAKENVATP
Sbjct: 601 APLAKENVATP 611
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151864|gb|AFA36448.1| GBSSII-2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/580 (79%), Positives = 519/580 (89%), Gaps = 1/580 (0%)
Query: 33 RCMKHSGLRSLNIIDDLQVKTMASKLA-TSRQAGRNGFRSQNGPSLMIVCGVGLNILFVG 91
+ M H+GLR+LN +D+L+VK M + +A +R N R+ + P+ IVCG G+N++F+G
Sbjct: 39 QAMTHNGLRALNTVDELRVKIMGNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLG 98
Query: 92 TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151
TEV PWSKTGGLGDVLGGLPPA+AANGHRVMT++PRYDQYKDAWDT+V IE+KVG+K EK
Sbjct: 99 TEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEK 158
Query: 152 VRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP 211
VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP GED++DNQLRFSLLC+AALEAP
Sbjct: 159 VRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEAP 218
Query: 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271
R+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK +Y+PKG+Y+SAKV FCIHNIAYQ
Sbjct: 219 RVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAYQ 278
Query: 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL 331
GRFA DF LLNLP +FKSSFDFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL
Sbjct: 279 GRFASADFALLNLPDEFKSSFDFIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEEL 338
Query: 332 VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391
VS +KGVELDN+IRK GI GIVNGMDVQEWNPLTDKY KYDASTV DAKPLLKEALQ
Sbjct: 339 VSTVEKGVELDNVIRKAGILGIVNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEALQ 398
Query: 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQL 451
AEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIKENVQIIVLGTGKKPMEKQLEQL
Sbjct: 399 AEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQL 458
Query: 452 EILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 511
EI YP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGL
Sbjct: 459 EIKYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 518
Query: 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLS 571
VDTV+EGFTGFQMG F+V+CE VDP DV A++TTV RAL TYGT A E++ N MAQDLS
Sbjct: 519 VDTVKEGFTGFQMGGFNVECEVVDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDLS 578
Query: 572 WKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 611
WKGPAKKWEE LLNL V SEPGIDGEEIAPLAKEN+ATP
Sbjct: 579 WKGPAKKWEEVLLNLGVVDSEPGIDGEEIAPLAKENIATP 618
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|182636946|gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica] gi|357528262|gb|AET80370.1| granule-bound starch synthase GBSS2 [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/602 (77%), Positives = 529/602 (87%), Gaps = 7/602 (1%)
Query: 14 SYGHEVASGLNSKA--SQMKF--RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGF 69
SYG V+SG + K +M F + + H+GLR+LN +D+L+V+ MA+ +A RQ
Sbjct: 17 SYG-AVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIMANSVA--RQTRGKTV 73
Query: 70 RSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129
S S +IVCG G+N++F+GTEV PWSKTGGLGDVLGGLPPA+AANGHRVMTI+PRYD
Sbjct: 74 NSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD 133
Query: 130 QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRT 189
QYKDAWDT+V +ELKVGDK E VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP
Sbjct: 134 QYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPVA 193
Query: 190 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTM 249
G D++DNQLRFSLLCQAAL APR+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK +
Sbjct: 194 GVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAI 253
Query: 250 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW 309
YKPKG+YK+AKV FCIHNIAYQGRFAF DF LLNLP +FKSSFDFIDGYNKPV+GRKINW
Sbjct: 254 YKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFIDGYNKPVKGRKINW 313
Query: 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 369
MKAGILESD VLTVSP+YA+ELVS +KGVELDNI+RK+ I+GIVNGMDVQEWNP+TDKY
Sbjct: 314 MKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDKY 373
Query: 370 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
VKYDASTV DAKPLLKEALQAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIK
Sbjct: 374 TTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIK 433
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
ENVQIIVLGTGKKPMEKQLEQLE YP+KARG+AKFN+PLAHMI AGADF+L+PSRFEPC
Sbjct: 434 ENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRFEPC 493
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGF MG+F+V+CE VDPVDV A++TTV RA
Sbjct: 494 GLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTRA 553
Query: 550 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVA 609
L +YGT A E++ N MAQDLSWKGPAKKWEE LL+L VA SE GI+GEEIAPLAKENVA
Sbjct: 554 LGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVLLSLGVANSELGIEGEEIAPLAKENVA 613
Query: 610 TP 611
TP
Sbjct: 614 TP 615
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223029784|gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/618 (76%), Positives = 532/618 (86%), Gaps = 10/618 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIV-CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
A T+ QA +++N ++ CG G+N++FVG EV PWSKTGGLGDVLGGLPPA
Sbjct: 60 AK--TTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPA 117
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
+AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 118 MAANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFL 177
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SKIYGP GEDY DNQLRFSLLCQAALEAPR+LNLNS+K+FSGPYGEDVVF+
Sbjct: 178 EKVWGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGEDVVFI 237
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFD
Sbjct: 238 CNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFD 297
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
FIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+ELVSG +KGVELDNIIRKTGI GI
Sbjct: 298 FIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITGI 357
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413
VNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEE
Sbjct: 358 VNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEE 417
Query: 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473
QKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMI
Sbjct: 418 QKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMI 477
Query: 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533
IAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+A
Sbjct: 478 IAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDA 537
Query: 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 593
VDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEP
Sbjct: 538 VDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEP 597
Query: 594 GIDGEEIAPLAKENVATP 611
GIDGEEIAPLAKENVATP
Sbjct: 598 GIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466653|ref|XP_002273608.1| PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Vitis vinifera] gi|296089007|emb|CBI38710.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/618 (75%), Positives = 534/618 (86%), Gaps = 11/618 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASG--LNSKASQMKFR----CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS+F+ RS + + KA+ K R + H+GLR+LN +D+L +T
Sbjct: 1 MAT-VTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTT 59
Query: 55 ASKLATSRQAGRNGFRSQN-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+ +R+ R GF+++N P I+CG G++++FVGTEV PWSKTGGLGDVLGGLPPA
Sbjct: 60 ---IKVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPA 116
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
++ANGHRVMT++PR+DQYKDAWDT V ++L VGD+ EKVRFFHC+KRGVDRVFVDHPWFL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SK+YGP GED+QDNQLRFSLLCQAALEAPRILNL S+KYFSGPYGEDVVF+
Sbjct: 177 EKVWGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFI 236
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
ANDWHT+ + CYLKTMY+ KG Y +AKVVFCIHNIAYQGRFAF DF LLNLP +FKSSFD
Sbjct: 237 ANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSFD 296
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
F DGY KPV+GRKINWMKAGILE+D VLTVSP+YA+ELVSG +KGVELDNI+R+TGI GI
Sbjct: 297 FTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGI 356
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413
+NGMDVQEWNPLTDKYI +KYDASTV +AK LLKEALQAE GLPVDRNIPVIGFIGRLEE
Sbjct: 357 INGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLEE 416
Query: 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473
QKGSDIL AAIP F+ NVQIIVLGTGKKPMEKQLEQLE YP+ ARGVAKFN+PLAHMI
Sbjct: 417 QKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHMI 476
Query: 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533
IAGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMGSFSV+C+A
Sbjct: 477 IAGADFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECDA 536
Query: 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 593
VDP D AV+T+V+RALATYGT AL EM++N MAQDLSWKGPAKKWEE LL+L V GSEP
Sbjct: 537 VDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVLLSLGVPGSEP 596
Query: 594 GIDGEEIAPLAKENVATP 611
GIDGEEIAPL+KENVATP
Sbjct: 597 GIDGEEIAPLSKENVATP 614
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197725528|gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/617 (76%), Positives = 528/617 (85%), Gaps = 8/617 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL 114
A K T R G+ +I CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+
Sbjct: 60 A-KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAM 118
Query: 115 AANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174
AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 119 AANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLE 178
Query: 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234
KVWGKT SKIYGP +GEDY DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+
Sbjct: 179 KVWGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGEDVVFIC 238
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFDF
Sbjct: 239 NDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFDF 298
Query: 295 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 354
IDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL SG +KGVELDNIIRKTGI GIV
Sbjct: 299 IDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGIV 358
Query: 355 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 414
NG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEEQ
Sbjct: 359 NGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEEQ 418
Query: 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474
KGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMII
Sbjct: 419 KGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMII 478
Query: 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534
AGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+AV
Sbjct: 479 AGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDAV 538
Query: 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 594
DP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEPG
Sbjct: 539 DPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEPG 598
Query: 595 IDGEEIAPLAKENVATP 611
IDGEEIAPLAKENVATP
Sbjct: 599 IDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170676395|gb|ACB30385.1| granule bound starch synthase Ib precursor [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/600 (76%), Positives = 519/600 (86%), Gaps = 9/600 (1%)
Query: 17 HEVASGLNSKASQMKFRCMK----HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQ 72
H SKA+ R ++ H+GLR LN++D+L +T A QA R G + +
Sbjct: 19 HRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAV--QARRKGLQGK 76
Query: 73 N-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131
N P+ +I+CG +N++F+GTEV PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY
Sbjct: 77 NVRPTGVIICG--MNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 134
Query: 132 KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGE 191
KDAWDT V IE+KVGDK EKV FFHCHKRGVDRVFVDHP FL KVWGK+ +K+YGP GE
Sbjct: 135 KDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGE 194
Query: 192 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYK 251
DYQDNQLRFSL CQAALEAPR+LNL SNKYFSGPYGEDV+F+ANDWHT+LIPCYLK+MY+
Sbjct: 195 DYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQ 254
Query: 252 PKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMK 311
G+YK+A+VV+CIHNIAYQGRFAF DF LLNLP QFKSSFDF+DG+ KPV GRK NWMK
Sbjct: 255 SIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMK 314
Query: 312 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIG 371
AGILESD+VLTVSP+YA+ELVSG DKGVELDNIIR+TGI GIVNGMDVQEWNP TDKY+
Sbjct: 315 AGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLT 374
Query: 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 431
VKY+ASTV++ K LLKEALQAEVGLPVDRNIP+IGFIGRLEEQKGSDIL AAIP FIKEN
Sbjct: 375 VKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKEN 434
Query: 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 491
+QI+ LGTGKK MEKQLEQLEI YP+KARGVAKFN+PLAHMIIAGADFILIPSRFEPCGL
Sbjct: 435 IQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGL 494
Query: 492 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
IQL AMRYGTVPIVASTGGLVDTV+EGFTGFQMGSF+V+CEAVDP DV A++ TV+RALA
Sbjct: 495 IQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALA 554
Query: 552 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 611
+GT A E++KN MAQDLSWKGPAK+WEE LL+L V GSE GI+GEEIAP AKEN+ATP
Sbjct: 555 VHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSLGVPGSEAGIEGEEIAPQAKENLATP 614
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258489621|gb|ACV72639.1| granule-bound starch synthase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/615 (74%), Positives = 524/615 (85%), Gaps = 10/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 596
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 597 GEEIAPLAKENVATP 611
GEE+APLAKENVATP
Sbjct: 595 GEEVAPLAKENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906484|gb|ACJ11735.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/615 (73%), Positives = 522/615 (84%), Gaps = 10/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS S H + G ++KA+ + + M H+GLRSLN +D L+++T +
Sbjct: 1 MAT-LTTSHFVSTS-SHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLRMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + +R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADYR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WH++L+PCYLK+MY+ +G+Y SAKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMSAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GYNKPV GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVMGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MDVQEWNP +DKYI VKYDA+T+M AKPLLKEA+Q EVGLP DR++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTIMKAKPLLKEAIQGEVGLPCDRDVPLIGFIGRLEEQKG 414
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDILA AIP EN QI+VLGTGKK ME Q+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLAAENCQIVVLGTGKKAMENQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 596
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 597 GEEIAPLAKENVATP 611
GEEIAPLA+ENVATP
Sbjct: 595 GEEIAPLARENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906516|gb|ACJ11751.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/615 (73%), Positives = 523/615 (85%), Gaps = 10/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 596
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 597 GEEIAPLAKENVATP 611
GEE+APLAKENVA P
Sbjct: 595 GEEVAPLAKENVAPP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 611 | ||||||
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.993 | 0.995 | 0.671 | 1.2e-223 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.918 | 0.921 | 0.650 | 1.8e-199 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.782 | 0.603 | 0.399 | 1.4e-87 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.787 | 0.737 | 0.384 | 4.4e-84 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.558 | 0.716 | 0.375 | 2.3e-58 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.549 | 0.670 | 0.364 | 1.2e-51 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.545 | 0.688 | 0.371 | 1.5e-51 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.594 | 0.75 | 0.340 | 1.5e-51 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.594 | 0.75 | 0.340 | 1.5e-51 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.623 | 0.798 | 0.326 | 2e-47 |
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2159 (765.1 bits), Expect = 1.2e-223, P = 1.2e-223
Identities = 412/614 (67%), Positives = 490/614 (79%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 597
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +G
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEG 596
Query: 598 EEIAPLAKENVATP 611
EEIAPLAKENVATP
Sbjct: 597 EEIAPLAKENVATP 610
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 1931 (684.8 bits), Expect = 1.8e-199, P = 1.8e-199
Identities = 367/564 (65%), Positives = 433/564 (76%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG 227
DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YG
Sbjct: 166 DHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 225
Query: 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 287
EDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +
Sbjct: 226 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSER 285
Query: 288 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 347
F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 286 FRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRL 345
Query: 348 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I F
Sbjct: 346 TGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAF 405
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467
IGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN
Sbjct: 406 IGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 465
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 527
PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 466 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRL 525
Query: 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587
SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L
Sbjct: 526 SVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 585
Query: 588 VAGSEPGIDGEEIAPLAKENVATP 611
VAGS PGI+G+EIAPLAKENVA P
Sbjct: 586 VAGSAPGIEGDEIAPLAKENVAAP 609
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 203/508 (39%), Positives = 281/508 (55%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V +FH GVD VF+D P F + IYG G D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR-----HLSNNIYG---GNRL-DILKRMVLFC 411
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
+AA+E P + Y G ++ F+ANDWHT+L+P YLK Y+ G+ K + V
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLV 467
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IHNIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTVS
Sbjct: 468 IHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVS 523
Query: 325 PHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDAST 378
Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y
Sbjct: 524 HGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLEN 582
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 438
+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++LG
Sbjct: 583 LHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLG 642
Query: 439 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
TG+ +E+ L Q+E Y +KARG F++ AH I AGAD +L+PSRFEPCGL QL+AM
Sbjct: 643 TGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMN 702
Query: 499 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--Q 556
YGT+P+V + GGL DTV++ F + D + + + L TY +
Sbjct: 703 YGTIPVVHAVGGLRDTVQQ-FDPYSETGLGW---TFDSAEAGKLIHALGNCLLTYREYKE 758
Query: 557 ALAEMMKNGMAQDLSWKGPAKKWEETLL 584
+ + + GM QDLSW A+K+EE L+
Sbjct: 759 SWEGLQRRGMTQDLSWDNAAEKYEEVLV 786
|
|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 197/512 (38%), Positives = 291/512 (56%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
+ + + ++V F+H ++ GVD VFVDH K + + + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258
RF+LLC AA EAP +L L F+ YGE +F+ NDWH L+P L Y+P G+YK
Sbjct: 256 RFTLLCHAACEAPLVLPLGG---FT--YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKD 310
Query: 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAGI 314
A+ + IHN+A+QG + L LP+++ + ++ + + G +N +K I
Sbjct: 311 ARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAI 370
Query: 315 LESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGV 372
+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I
Sbjct: 371 VTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPF 429
Query: 373 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 432
Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++
Sbjct: 430 HYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDI 488
Query: 433 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLI 492
Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL
Sbjct: 489 QFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLN 548
Query: 493 QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAAVSTTVRRALA 551
QL+AMRYGT+P+V TGGL DTVE F + G V P+ ++ + +R A A
Sbjct: 549 QLYAMRYGTIPVVHGTGGLRDTVEN-FNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAA 607
Query: 552 TYGT--QALAEMMKNGMAQDLSWKGPAKKWEE 581
TY Q+ +M+ GM ++ SW+ A ++E+
Sbjct: 608 TYREYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
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| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 560 (202.2 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 136/362 (37%), Positives = 204/362 (56%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFK 289
V ++DWHT+++ L+ Y+ +Y+ K V+ IHN+ +QG F E + LL L ++
Sbjct: 128 VLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYF 187
Query: 290 SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG 349
S + ++ Y +N+MK GI+ SD + VSP Y +E + E G +LD ++RK
Sbjct: 188 HS-EQLEFYGN------VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYN 239
Query: 350 IK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
K GIVNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I
Sbjct: 240 DKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISM 298
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467
+ RL +QKG D++ ++E+VQ I+LG+G E+ E + YPEK + FN
Sbjct: 299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNE 358
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 525
LAH + AG+D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G
Sbjct: 359 ELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNG 418
Query: 526 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLL 584
+ A D + TV RA+ Y +++ E ++K M +D SW+ A +++
Sbjct: 419 FSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYK 472
Query: 585 NL 586
+L
Sbjct: 473 SL 474
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| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 130/357 (36%), Positives = 198/357 (55%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 290
VF A+DWHT+ +P +L T+Y+ + A V +HN+ +QG F +L + +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH-- 196
Query: 291 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KT 348
F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R
Sbjct: 197 -FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSA 250
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
+ GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +
Sbjct: 251 DLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLV 309
Query: 409 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468
GRL +QKG DILA AI + +VQ+++LG G+ + YPEK +N
Sbjct: 310 GRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNG 369
Query: 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE----EGFTGFQM 524
L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+VE + TG
Sbjct: 370 LSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGF 429
Query: 525 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 581
+S D +A+ V T RR A+A ++ N MA+ +W+ A ++EE
Sbjct: 430 KFWSHDADALFDTVGWTVHTWYRRK------DAMAALIGNAMAKRFTWEDSAARYEE 480
|
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| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 138/371 (37%), Positives = 199/371 (53%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DV+ +DW T+LIP L+ + VF IHN+AYQG F LP+
Sbjct: 132 DVIH-CHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSAL 190
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
++ ++++ Y + +N MK IL +D++ TVS Y +E+++ +G L+ ++ +
Sbjct: 191 FTT-EWLEYYGQ------LNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARR 242
Query: 349 G--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 406
G + GIVNG+D EWNP DK I Y A + K K LQ E+G+P ++P+IG
Sbjct: 243 GDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIG 301
Query: 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA--- 463
+ RL EQKG D++ +P + +Q ++LGTG LE+L + A ++
Sbjct: 302 MVSRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY---LERLNSFRSKGAANISINL 358
Query: 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------E 516
FN PLA I AG+D L+PSRFEPCGL QL AMRYGTVP+V TGGL DTV
Sbjct: 359 GFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPR 418
Query: 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGP 575
EG TGF F+ D A + RALA Y ++ +M+ GM +D+SW
Sbjct: 419 EG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNA 467
Query: 576 AKKWEETLLNL 586
A ++E TL +
Sbjct: 468 AGRYE-TLYRM 477
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| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 134/393 (34%), Positives = 208/393 (52%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 550 LATYGTQALAEMMK---NGMAQDLSWKGPAKKW 579
L Y Q EM+K M Q+ SW+ A+++
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
|
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| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 134/393 (34%), Positives = 208/393 (52%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 550 LATYGTQALAEMMK---NGMAQDLSWKGPAKKW 579
L Y Q EM+K M Q+ SW+ A+++
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
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| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 133/407 (32%), Positives = 205/407 (50%)
Query: 188 RTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGEDVVFVANDWHTSLIPCY 245
R G Y D L F+ A +L + SG P+ V A+DWH L P Y
Sbjct: 90 RPGSPYHDTNL-FAYTDNVLRFA--LLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAY 146
Query: 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305
L +P AK VF +HN+AYQG F + LP F F+ I G G+
Sbjct: 147 LAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF---FN-IHGLE--FNGQ 194
Query: 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEW 362
I+++KAG+ +D + VSP YA+E+ + G+E L R+ + G++NG+D + W
Sbjct: 195 -ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIW 253
Query: 363 NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 422
+P TD + +Y T+ D K K LQ +GL VD +P+ + RL QKG D++
Sbjct: 254 SPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312
Query: 423 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482
A+P +++ Q+ +LG G +++ YP + ++ +H I+ GAD IL+
Sbjct: 313 ALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILV 372
Query: 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAA 541
PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + + + V V + + +
Sbjct: 373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--CSLENLADGVASGFVFEDSNAWS 430
Query: 542 VSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEETLLNLE 587
+ +RRA + +L + + MA D SW+ AK + E L+
Sbjct: 431 LLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LL05 | SSG1B_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7084 | 0.9067 | 0.9805 | N/A | no |
| Q42857 | SSG1_IPOBA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7170 | 0.9885 | 0.9934 | N/A | no |
| P09842 | SSG1_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6632 | 0.9476 | 0.9601 | N/A | no |
| Q43784 | SSG1_MANES | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7272 | 0.9869 | 0.9917 | N/A | no |
| P04713 | SSG1_MAIZE | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6747 | 0.9328 | 0.9421 | N/A | no |
| O82627 | SSG1_ANTMA | 2, ., 4, ., 1, ., 2, 1 | 0.7231 | 0.9901 | 0.9950 | N/A | no |
| Q42968 | SSG1_ORYGL | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6784 | 0.9247 | 0.9277 | N/A | no |
| Q43092 | SSG1_PEA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7277 | 0.9165 | 0.9286 | N/A | no |
| A2Y8X2 | SSG1_ORYSI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6802 | 0.9247 | 0.9277 | N/A | no |
| Q00775 | SSG1_SOLTU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7194 | 0.9901 | 0.9967 | N/A | no |
| Q43134 | SSG1_SORBI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6873 | 0.9214 | 0.9259 | N/A | no |
| Q9MAQ0 | SSG1_ARATH | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6921 | 0.9934 | 0.9950 | yes | no |
| P27736 | SSG1_WHEAT | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6336 | 0.9509 | 0.9447 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.21 | 0.979 |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.242 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00011972001 | SubName- Full=Chromosome undetermined scaffold_2674, whole genome shotgun sequence; (614 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00028257001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (445 aa) | • | • | • | • | 0.527 | ||||
 | GSVIVG00029046001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (509 aa) | • | • | • | • | 0.499 | ||||
 | GSVIVG00007848001 | SubName- Full=Chromosome undetermined scaffold_1099, whole genome shotgun sequence; (319 aa) | • | 0.489 | |||||||
 | GSVIVG00014579001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (519 aa) | • | • | • | • | 0.469 | ||||
 | GSVIVG00019926001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (520 aa) | • | • | • | • | 0.449 | ||||
 | GSVIVG00036349001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (527 aa) | • | • | • | 0.424 | |||||
 | GSVIVG00015571001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (755 aa) | • | • | 0.422 | ||||||
 | GSVIVG00025477001 | RecName- Full=Galactose-1-phosphate uridylyltransferase; EC=2.7.7.12; (332 aa) | • | 0.408 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 611 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-154 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-125 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 3e-95 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 5e-82 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 1e-75 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 4e-64 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 6e-58 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-25 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-14 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 2e-14 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 6e-14 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 8e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 1e-11 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 2e-11 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 8e-10 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 2e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 7e-09 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-08 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-08 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 7e-08 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-06 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 2e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 1e-04 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 6e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 8e-04 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 0.001 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 0.003 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.004 | |
| pfam14172 | 133 | pfam14172, DUF4309, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 552 bits (1425), Expect = 0.0
Identities = 203/509 (39%), Positives = 283/509 (55%), Gaps = 50/509 (9%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVI 141
+LFV +EVAP++KTGGLGDV+G LP ALA GH V I P+Y + D +
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLF 60
Query: 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFS 201
+ VG + E V F GV F+D+P + + +G DY+DN RF+
Sbjct: 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLY-------DDSGYDYEDNAERFA 113
Query: 202 LLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV 261
L +AALE R L + + +DWHT L+P LK Y +K+ K
Sbjct: 114 LFSRAALELLRRLG-----------WKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIKT 161
Query: 262 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321
VF IHN+AYQG F E L LP + D ++ Y + +N++KAGI+ +D V
Sbjct: 162 VFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQ------VNFLKAGIVYADAVT 215
Query: 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379
TVSP YA+E+++ E G LD ++ R + GI+NG+D WNP TD ++ Y A
Sbjct: 216 TVSPTYAREILTPEF-GEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA-DD 273
Query: 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 439
++ K K ALQ E+GLPVD + P+ GF+GRL EQKG D+L A+P ++ Q+++LG+
Sbjct: 274 LEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGS 333
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G E+ L +L YP + + ++ LAH+I AGADF L+PSRFEPCGL Q++AMRY
Sbjct: 334 GDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393
Query: 500 GTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
GTVPIV +TGGL DTV + TGF F + + A+ +RRALA Y
Sbjct: 394 GTVPIVRATGGLADTVIDYNEDTGEGTGF---VF-------EGYNADALLAALRRALALY 443
Query: 554 GTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 581
A ++ +N MAQD SW AK++ E
Sbjct: 444 RDPEAWRKLQRNAMAQDFSWDRSAKEYLE 472
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 539 bits (1392), Expect = 0.0
Identities = 208/516 (40%), Positives = 283/516 (54%), Gaps = 57/516 (11%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW----DTDVV 140
+ +LFV E+AP++KTGGL DV+G LP ALAA GH V + P Y +D +
Sbjct: 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVEL 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
++L VG + V+ F GV F+D+P IYG DY DN RF
Sbjct: 61 VDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLF-----DRPGGIYGD----DYPDNAERF 111
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260
+ +AA E L + DVV A+DWHT+L+P LK +Y+P K
Sbjct: 112 AFFSRAAAELLSGLG----------WQPDVV-HAHDWHTALVPALLKAVYRPN----PIK 156
Query: 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320
VF IHN+AYQG F +DF L LP ++ + Y + +N++K GI+ +D V
Sbjct: 157 TVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-EFYGR------VNFLKGGIVYADRV 209
Query: 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDAST 378
TVSP YA+E+++ E G LD +++ K GI+NG+D + WNP TD Y+ Y A
Sbjct: 210 TTVSPTYAREILTPE-FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADD 268
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 438
+ K KEALQ E+GLPVD ++P+ G I RL +QKG D+L AA+P ++ Q++VLG
Sbjct: 269 -LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLG 327
Query: 439 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
TG +E+ L +L YP R + ++ LAH+I AGADFIL+PSRFEPCGL QL+AMR
Sbjct: 328 TGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMR 387
Query: 499 YGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552
YGTVPIV TGGL DTV +G TGF + D A+ + RAL
Sbjct: 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFL----------FEEYDPGALLAALSRALRL 437
Query: 553 YGT--QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586
Y + KN M+QD SW AK++ E +L
Sbjct: 438 YRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 452 bits (1165), Expect = e-154
Identities = 196/509 (38%), Positives = 257/509 (50%), Gaps = 63/509 (12%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDVVIEL 143
+ ILFV +E AP KTGGLGDV+G LP ALAA GH V + P Y ++ D VV L
Sbjct: 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ V F H GV +D P + +G Y DN RF+
Sbjct: 61 DLFT----VLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFF 104
Query: 204 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 263
AA E L+ P D+V A+DWHT LIP LK Y Y K VF
Sbjct: 105 SWAAAEF--AEGLDPR-----P---DIVH-AHDWHTGLIPALLKEKYWR--GYPDIKTVF 151
Query: 264 CIHNIAYQGRFAFEDFGLLNLPAQ-FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322
IHN+AYQG F E G L LPA+ F G +I+++KAG+ +D V T
Sbjct: 152 TIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG--------QISFLKAGLYYADRVTT 203
Query: 323 VSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVM 380
VSP YA+E+ + E G L+ ++R K GI+NG+D WNP TD + Y A +
Sbjct: 204 VSPTYAREITTPEF-GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADD-L 261
Query: 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 440
+ K K ALQ GLP D + P+ + RL EQKG D++ A+P +++ Q+++LGTG
Sbjct: 262 EGKAENKRALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTG 320
Query: 441 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 500
+E+ L YP K ++ LAH I AGAD L+PSRFEPCGL QL+A+RYG
Sbjct: 321 DPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG 380
Query: 501 TVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
T+PIV TGGL DTV E TGF F D + + +RRAL Y
Sbjct: 381 TLPIVRRTGGLADTVIDYNPEDGEA-TGF---VF-------DDFNAEDLLRALRRALELY 429
Query: 554 GTQAL-AEMMKNGMAQDLSWKGPAKKWEE 581
L + + MAQD SW A+++ E
Sbjct: 430 RQPPLWRALQRQAMAQDFSWDKSAEEYLE 458
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 378 bits (974), Expect = e-125
Identities = 187/515 (36%), Positives = 254/515 (49%), Gaps = 62/515 (12%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW--DTDVVIEL 143
ILFV +E+ P+ KTGGL DV+G LP ALA G V + P Y + + W VV +
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 144 ---KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPR--TGEDYQDNQL 198
K G + + GVD +D+P + T Y DN
Sbjct: 62 GVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL------------FKRPDSTLYGYYDNAE 109
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258
RF+ AA E P D+V A+DW T L+P YLK + + Y
Sbjct: 110 RFAFFSLAAAEL-----APLGLISWLP---DIVH-AHDWQTGLLPAYLK--QRYRSGYI- 157
Query: 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318
VF IHN+AYQG F + L LP + +SF Y + I+++K G+ +D
Sbjct: 158 IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-FYGQ------ISFLKGGLYYAD 210
Query: 319 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDA 376
V TVSP YA E+ + + G L+ ++ K GI+NG+D WNP TD YI Y A
Sbjct: 211 AVTTVSPTYAGEIYT-PEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSA 269
Query: 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV 436
+ AK K ALQ +GL VD P+ GF+ RL QKG D+L AI +++ Q+++
Sbjct: 270 EV-LPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVL 328
Query: 437 LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 496
LGTG +E+ L L +P + V ++ PLAH+I AGAD IL+PSRFEPCGL QL+A
Sbjct: 329 LGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYA 388
Query: 497 MRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
MRYGT+PIV TGGL DTV + TGF + ++ +RR
Sbjct: 389 MRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFL----------FLQTNPDHLANALRR 438
Query: 549 ALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 581
AL Y L ++ N M D SW AK++ E
Sbjct: 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 300 bits (770), Expect = 3e-95
Identities = 182/520 (35%), Positives = 260/520 (50%), Gaps = 72/520 (13%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
L +L V +E+ P KTGGL DV G LP AL A+G V T+ P Y V+ ++
Sbjct: 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY--------PAVLAGIE 55
Query: 145 VGDKIEKVR-FFHCHKR-------GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
+++ F R G+D +D P ++ + + GP G+D+ DN
Sbjct: 56 DAEQVHSFPDLFGGPARLLAARAGGLDLFVLDAP----HLYDRPGNPYVGP-DGKDWPDN 110
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMY 256
RF+ L +AA + L + D+V A+DW L P YL +P
Sbjct: 111 AQRFAALARAAAAIGQGL--------VPGFVPDIVH-AHDWQAGLAPAYLHYSGRPA--- 158
Query: 257 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG---YNKPVRGRKINWMKAG 313
VF IHN+A+QG+F E G L LP S+F +DG Y I ++KAG
Sbjct: 159 --PGTVFTIHNLAFQGQFPRELLGALGLPP---SAFS-LDGVEYYGG------IGYLKAG 206
Query: 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG 371
+ +D + TVSP YA E + G + G+ LD ++R+ + GI+NG+D WNP TD+ I
Sbjct: 207 LQLADRITTVSPTYALE-IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIA 265
Query: 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 431
YD T + A+ K ALQA GL D + ++G I RL QKG D+L A+P + E
Sbjct: 266 ATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEG 324
Query: 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 491
Q+ +LG+G +E + YP + V ++ LAH+I AGAD +L+PSRFEPCGL
Sbjct: 325 AQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGL 384
Query: 492 IQLHAMRYGTVPIVASTGGLVDTV----EEGF-----TGFQMGSFSVDCEAVDPVDVAAV 542
QL A+RYG VP+VA GGL DTV E TG Q PV A+
Sbjct: 385 TQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS----------PVTADAL 434
Query: 543 STTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 581
+ +R+ A + + +NGM D+SW+ PA+ +
Sbjct: 435 AAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQHYAA 474
|
Length = 485 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 5e-82
Identities = 101/261 (38%), Positives = 136/261 (52%), Gaps = 27/261 (10%)
Query: 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146
ILFV +E AP++KTGGL DV+G LP ALA GH V I PRY + + ++
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVI-ELY 59
Query: 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQA 206
V GVD F+D+P + + IYG G DY+DN RF+ +A
Sbjct: 60 VLFGYVGVARLELDGVDVYFLDNPEYFDR------PGIYGD-AGRDYEDNAERFAFFSRA 112
Query: 207 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 266
ALE R L + D++ +DWHT L+P YLK Y +K+ K VF IH
Sbjct: 113 ALELLRKLG----------WKPDII-HCHDWHTGLVPAYLKEAYADDPFFKNIKTVFTIH 161
Query: 267 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326
N+AYQG F + LL LP IDG +IN++KAGI+ +D V TVSP
Sbjct: 162 NLAYQGVFPADLLDLLGLPW----EDFSIDGLEFY---GQINFLKAGIVYADAVTTVSPT 214
Query: 327 YAQELVSGEDKGVELDNIIRK 347
YA+E+++ E G LD ++RK
Sbjct: 215 YAEEILTPEF-GEGLDGLLRK 234
|
Length = 234 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 1e-75
Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 27/359 (7%)
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
+DW+ L+P LKT+Y +K K V IHN+ QG F+ F L LP + S
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH- 205
Query: 295 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 352
G ++N + G+ +D++ T SP YA+E+ ++ LD ++ RK + G
Sbjct: 206 -------REGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHG 258
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I+NG+D ++WNP TDK I +Y +D K K+AL EVGLP D P++G I +
Sbjct: 259 ILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLEEVGLPFDEETPLVGVIINFD 317
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
+ +G+++LA ++ ++ ++Q+++ G+G K EK+ + +PE+ +F H+
Sbjct: 318 DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFS 528
IAG D +L+P + E CG++Q+ AM YGT+P+ + GG+V+T+EE +GF ++
Sbjct: 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT 437
Query: 529 VDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 586
+ A+ + ALA Y + E++ M +D SWK A+++ + L
Sbjct: 438 PE----------ALVAKLGEALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYREL 486
|
Length = 489 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 227 bits (579), Expect = 4e-64
Identities = 166/527 (31%), Positives = 258/527 (48%), Gaps = 74/527 (14%)
Query: 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-----QYKDAWDTD 138
GL+I+ + E+AP +K GGL DV+ GL AL GH V + P+YD Q ++ D
Sbjct: 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLD 540
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
VV+E + K + + G+ F++ HP +K + + Q YG D+
Sbjct: 541 VVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP---SKFFWRAQ--YYGE------HDD 589
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI-PCYLKTMYKPKGM 255
RFS +AALE L S K D++ +DW T+ + P Y +Y PKG
Sbjct: 590 FKRFSYFSRAALE----LLYQSGKKP------DIIH-CHDWQTAFVAPLYWD-LYAPKG- 636
Query: 256 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-----KINWM 310
+ SA++ F HN YQG D L + ++P R + +IN +
Sbjct: 637 FNSARICFTCHNFEYQGTAPASDLASCGLD---------VHQLDRPDRMQDNAHGRINVV 687
Query: 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYI 370
K I+ S++V TVSP YAQE+ S +G++ GI+NG+D WNP TD+++
Sbjct: 688 KGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFL 747
Query: 371 GVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
V+Y+A+ + K K AL+ ++GL D + P++G I RL QKG ++ AI +
Sbjct: 748 KVQYNAND-LQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE 806
Query: 430 ENVQIIVLGTGKKP-MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRF 486
Q ++LG+ P ++++ E + + R + K++ L+H I A +D +IPS F
Sbjct: 807 LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMF 866
Query: 487 EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP---------- 536
EPCGL Q+ AMRYG+VPIV TGGL D+V F D E +
Sbjct: 867 EPCGLTQMIAMRYGSVPIVRKTGGLNDSV-----------FDFDDETIPVELRNGFTFLT 915
Query: 537 VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 581
D +++ + RA Y + ++++ M D SW A ++EE
Sbjct: 916 PDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEE 962
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 6e-58
Identities = 156/528 (29%), Positives = 235/528 (44%), Gaps = 117/528 (22%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
++I+ + E+AP +K GGLGDV+ L A+ H V I P+YD + D+ +
Sbjct: 588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRS 647
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSL 202
+++ + G+ F++ + F A +YG R ++ RF
Sbjct: 648 YSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGC-------VYGCR------NDGERFGF 694
Query: 203 LCQAALE-------APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM 255
C AALE P I++ +DW ++ + K Y G+
Sbjct: 695 FCHAALEFLLQSGFHPDIIH------------------CHDWSSAPVAWLFKDHYAHYGL 736
Query: 256 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315
K A+VVF IHN+ +FG N + +
Sbjct: 737 SK-ARVVFTIHNL---------EFG--------------------------ANHIGKAMA 760
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG-IKGIVNGMDVQEWNPLTDKYIGVKY 374
+D TVSP Y++E VSG I GI+NG+D W+P D +I V Y
Sbjct: 761 YADKATTVSPTYSRE-VSGNSA------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPY 813
Query: 375 DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI 434
+ V++ K KEALQ +GL ++P++G I RL QKG ++ AI ++ N Q+
Sbjct: 814 TSENVVEGKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQV 872
Query: 435 IVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
++LG+ P + QL + ++AR ++ PL+H+I AGADFIL+PS FEPC
Sbjct: 873 VLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPC 932
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-------CEAVDP------ 536
GL QL AMRYG++P+V TGGL DTV F VD + ++P
Sbjct: 933 GLTQLTAMRYGSIPVVRKTGGLFDTV-----------FDVDHDKERAQAQGLEPNGFSFD 981
Query: 537 -VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 581
D A V + RA++ + G + K M QD SW PA + E
Sbjct: 982 GADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 84/358 (23%), Positives = 134/358 (37%), Gaps = 96/358 (26%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DVV A+DW L + +V +H +
Sbjct: 87 DVV-HAHDWLALLAAALAARLLG-------IPLVLTVHGLE------------------- 119
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
F + + + +D ++ VS +EL E GV + I
Sbjct: 120 ---FGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR--ELGGVPPEKITV-- 172
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
I NG+D + + P A + +G+P D PVI F+
Sbjct: 173 ----IPNGVDTERFRPAPR---------------------AARRRLGIPEDE--PVILFV 205
Query: 409 GRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 465
GRL +KG D+L A+ KE +V+++++G G P+ ++LE L G+
Sbjct: 206 GRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--PLREELEALA-----AELGLGDRV 258
Query: 466 ----NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEG 518
+P + A AD ++PS +E GL+ L AM G P+VAS GG+ + VE+G
Sbjct: 259 TFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPEVVEDG 317
Query: 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG---MAQDLSW 572
TG V P D A++ + R L L + + +A+ SW
Sbjct: 318 ETGL----------LVPPGDPEALAEAILRLLD---DPELRRRLGEAARERVAERFSW 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.0 bits (183), Expect = 2e-14
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQ 450
+GL + V+ ++GRL+ +KG D+L A K +++++++G G + E+ +
Sbjct: 190 RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKL 249
Query: 451 LEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 506
+ L E KF + ++A AD ++PS E GL+ L AM GT I +
Sbjct: 250 AKKLGLED---NVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 507 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNG 565
GG+ + VE+G TG V P DV ++ + + L + L E +
Sbjct: 307 DVGGIPEVVEDGETGL----------LVPPGDVEELADALEQLLEDPELREELGEAARER 356
Query: 566 MAQDLSWKGPAKKWEETLLNL 586
+ ++ SW+ A++ E L
Sbjct: 357 VEEEFSWERIAEQLLELYEEL 377
|
Length = 381 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355
D P + ++ + +D V+ VS A EL + I + I N
Sbjct: 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---------LGIDPEKVTVIPN 178
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 415
G+D + ++P A ++GLP D+ VI F+GRL +K
Sbjct: 179 GVDTERFSPA---------------------DRAEARKLGLPEDK--KVILFVGRLVPRK 215
Query: 416 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-------- 465
G D L A+ +K+ +V ++++G G P+ + LE L G+
Sbjct: 216 GIDYLIEALARLLKKRPDVHLVIVGDG--PLREALEAL-----AAELGLEDRVTFLGAVP 268
Query: 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQM 524
+ + A AD ++PS E GL+ L AM G P+VA+ GG+ + + +G G
Sbjct: 269 HEEVP-AYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPEIITDGENGLL- 325
Query: 525 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 581
V P D A++ + R LA + + + SW+ A++ E
Sbjct: 326 ---------VPPGDPEALAEAILRLLADPWLRLGRAARRRVAER-FSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 6e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462
P+I F+GRL +KG D+L A +++ + ++ G EK+L++L + + +
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVI 62
Query: 463 AKFNIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 520
+P +I AD ++PSR+E GL+ L AM G I GG + V++G T
Sbjct: 63 FVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGET 122
Query: 521 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
G VDP D A++ + + L
Sbjct: 123 GL----------LVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 8e-13
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ---IIVLGTGKKP 443
EA +A + D+ P I +GRL+ +KG D L A + + +IV G
Sbjct: 207 AEARRARLLRDPDK--PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI 264
Query: 444 MEKQLEQLEILYPEKARGVA-KFNIPLAH------MIIAGADFILIPSRFEPCGLIQLHA 496
+ E+L L + GV + + P + AD + P+ +EP GL L A
Sbjct: 265 LAMDEEELREL--ARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEA 322
Query: 497 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
M G P+VA+ GG D V +G TG VDP D A++ +RR L
Sbjct: 323 MACGL-PVVATAVGGPRDIVVDGVTGL----------LVDPRDPEALAAALRRLLT 367
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 338 GVELDNIIRKTGIK------GIVNGM--DVQEWNP-LTDKYIGVKYDASTVMDAKPLLKE 388
G +L + KT I+ + GM D+ ++ P L + + V Y+ + KP
Sbjct: 130 GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN 189
Query: 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL 448
+ G +DR+ P I F+GR+ QKG L A+ H+I ++VQ+ VL G +
Sbjct: 190 VVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAV-HYIPKDVQV-VLCAGAPDTPEVA 245
Query: 449 EQLEILYPEKAR---GVAKFN----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501
E++ R G+ N +++ A+ + PS +EP G++ L AM GT
Sbjct: 246 EEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT 305
Query: 502 VPIVAS-TGGLVDTVEEGFTGF 522
P+VAS TGG+ + V +G TGF
Sbjct: 306 -PVVASATGGIPEVVVDGETGF 326
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 1e-11
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 465
F+GRL +KG D L A + + ++ G P + LE+L R V
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDR-VIFLG 167
Query: 466 ---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
L +++A AD ++PS E GL+ L AM G I GG + VE+G TG
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG--TGK 441
+ L+ ++ + D V+ + GR+ KG +L A N++++V+G T
Sbjct: 179 PQPNLRQQLNISPDET--VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTAS 236
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------------ADFILIPSRF-E 487
EK Q ++L K G I+ G AD +++PS+ E
Sbjct: 237 SKGEKAAYQKKVLEAAKRIG--------DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEE 288
Query: 488 PCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546
++ + AM G P++AST GG+ + V EG TG+ + +P+ ++ + +
Sbjct: 289 AFCMVAVEAMAAGK-PVLASTKGGITEFVLEGITGYHLA---------EPMTSDSIISDI 338
Query: 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585
R LA +AE K+ + SW+G +++EE + N
Sbjct: 339 NRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
|
Length = 380 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 40/196 (20%)
Query: 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGK 441
++ + + L + + PVI +GRL QKG D L A KE + ++++LG G
Sbjct: 171 EEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDG- 229
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILIPSRFEPC 489
P+ ++LE L + + P ++ AD ++ SR+E
Sbjct: 230 -PLREELEAL----------AKELGLADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGF 276
Query: 490 GLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
+ L AM GT P+VA+ G + +E+G G V D AA++
Sbjct: 277 PNVLLEAMALGT-PVVATDCPGPREILEDGENGL----------LVPVGDEAALAAAALA 325
Query: 549 ALATYGTQALAEMMKN 564
L L E +
Sbjct: 326 LLDLLLDPELRERLAA 341
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461
PV+ ++GRL +K + L A + V+++++G G P +LE YP
Sbjct: 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG--PARARLEAR---YPN---- 248
Query: 462 VAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVE 516
F L A AD + PSR E GL+ L AM G +P+VA GG D V
Sbjct: 249 -VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAGGPADIVT 306
Query: 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPA 576
+G G V+P D A + + LA MA +
Sbjct: 307 DGENGL----------LVEPGDAEAFAAALAALLAD-PELRRR------MAARARAEAER 349
Query: 577 KKWEETLLNLE 587
+ WE L NL
Sbjct: 350 RSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 397 PVDRNIPVIGFIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL 454
P+ + PV F+ RL + KG D L AA I NV+++++G G + + ++E L
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242
Query: 455 YPEKARGVAKF-----NIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVAS 507
G +F ++P ++A AD ++PS E P L++ AM G P++A+
Sbjct: 243 ---GLEGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLE--AMAMG-RPVIAT 293
Query: 508 -TGGLVDTVEEGFTGF 522
G + V +G GF
Sbjct: 294 DVPGCREAVIDGVNGF 309
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 57/199 (28%)
Query: 407 FIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQL--------EILYP 456
+GRL QKG D+L A A + ++ ++G G P + LE L ++
Sbjct: 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG--PEREALEALIKELGLEDRVILL 240
Query: 457 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS--TGGLVDT 514
+ + ++ A A ++ SRFE ++ L AM +G +P+++ G +
Sbjct: 241 GFTKNIEEY--------YAKASIFVLTSRFEGFPMVLLEAMAFG-LPVISFDCPTGPSEI 291
Query: 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--------- 565
+E+G G V DV ALA +AL +M++
Sbjct: 292 IEDGVNGL----------LVPNGDVE--------ALA----EALLRLMEDEELRKRMGAN 329
Query: 566 ---MAQDLSWKGPAKKWEE 581
A+ S + K+WEE
Sbjct: 330 ARESAERFSIENIIKQWEE 348
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEK 446
+A +GLP+D V+ F+GR++ K D+L A+ + N+++IV+G
Sbjct: 210 RARLGLPLDT--KVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLA 267
Query: 447 QLEQLEILYPEKARGVAK---FNIP-----LAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
+ L L E G+A F P L H+ A AD + +PS E GL+ + A
Sbjct: 268 TPDALIELAAE--LGIADRVRFLPPRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQA 324
Query: 499 YGTVPIVASTGGLVDTVEEGFTGF 522
GT + A GGL V +G TG
Sbjct: 325 CGTPVVAARVGGLPVAVADGETGL 348
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 7e-08
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 463
GFIG+L KG D+L A + +++++++G G + E+ +LE + G
Sbjct: 193 RFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESY-ELEGDPRVEFLGAY 251
Query: 464 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
A D +++PS + E L+ A+ G I + GG+ + V +G G
Sbjct: 252 PQEEIDDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
Query: 523 QMGSFSVDCEAVDPVDVAAV 542
F D D+AA
Sbjct: 310 ---LFPPG----DAEDLAAA 322
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 7e-08
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL---AAAIPHFIKENVQIIVL 437
D + E P F+GRL KG D+L AAA+P + ++++
Sbjct: 170 DPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-----DAPLVIV 224
Query: 438 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI--------IAGADFILIPS--RFE 487
G G P+E +LE L G+ + + +A D + PS R E
Sbjct: 225 GEG--PLEAELEALAAAL-----GLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSE 276
Query: 488 PCGLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541
G++ L AM +G P++++ G G TG V P D AA
Sbjct: 277 AFGIVLLEAMAFG-KPVISTEIGTGGSYVNLHGVTGL----------VVPPGDPAA 321
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 31/207 (14%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKP 443
+ P+ + +I F+GRL +KG D+L A + + +++ G +
Sbjct: 188 LPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-RFPDWHLVIAGPDEGG 246
Query: 444 MEKQLEQLEILYPEKARGVAK---FNIPLAHMIIAG----ADFILIPSRFEPCGLIQLHA 496
+L+Q+ A G+ F L A AD ++PS E G++ A
Sbjct: 247 YRAELKQI-----AAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEA 301
Query: 497 MRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 554
+ GT P+V + + +E G C V DV A++ +RRAL
Sbjct: 302 LACGT-PVVTTDKVPWQELIEYG------------CGWVVDDDVDALAAALRRALELPQR 348
Query: 555 TQALAEMMKNGMAQDLSWKGPAKKWEE 581
+A+ E + + + SW A++ E
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460
PV+ ++GRL ++K D L A +KE +V+++++G G P ++LE+L +
Sbjct: 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG--PEREELEEL-----AREL 255
Query: 461 GVAKF----------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STG 509
G+A +P + AD + S E GL+ L AM G P+VA
Sbjct: 256 GLADRVIFTGFVPREELPDYY---KAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP 311
Query: 510 GLVDTVEEGFTGF 522
GL D V +G GF
Sbjct: 312 GLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I NG+D + P K ++ L GLP D+ I + G +G +
Sbjct: 164 IPNGIDTTIFRPR----------------DKREARKRL----GLPADKKIILFGAVGGTD 203
Query: 413 EQKGSDILAAA---IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--I 467
+KG D L A + K++++++V G + L P + N
Sbjct: 204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDL-------PFPVHYLGSLNDDE 256
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGS 526
LA +I + AD ++PS E + A+ GT P+VA GG+ D V+ G TG+
Sbjct: 257 SLA-LIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDHGVTGY---- 310
Query: 527 FSVDCEAVDPVDVAAVSTTVRRALA 551
P D ++ + LA
Sbjct: 311 ------LAKPGDPEDLAEGIEWLLA 329
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL--EILYPEK 458
P I F+GR E+KG +L A + V+++++G G P+ LE L + +
Sbjct: 189 PRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDG--PLLAALEALARALGLGGR 246
Query: 459 AR--GVAKFNIPLAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS-TG 509
G M A L PS P ++ L A G VP+VA+ G
Sbjct: 247 VTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-VPVVATRHG 303
Query: 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562
G+ + VE+G TG V DVAA++ + R LA L M
Sbjct: 304 GIPEAVEDGETGL----------LVPEGDVAALAAALGRLLA---DPDLRARM 343
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460
+I F+GRL+E KG D L A +K+ N +++++G G Y +
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGD-------------YSRYLQ 274
Query: 461 GVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507
K + + G AD ++PS E C + + M +G +P++ +
Sbjct: 275 ECKKI---WSKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHG-LPLIGT 330
Query: 508 TG-GLVDTVEEGFTG 521
T GL + +E+G G
Sbjct: 331 TSTGLSEMIEDGLNG 345
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEIL-YP 456
I IG G G L +++ +V++ ++G+G + + + + L +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFV 60
Query: 457 EKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTV 515
E + +A AD L P RF L L A+ G P+VA+ G
Sbjct: 61 EDLAAL-----------LASADVALAPLRFGAGSPLKLLEALAAGL-PVVATDIGAEGLP 108
Query: 516 EEGFTGF 522
E+ G
Sbjct: 109 EDLGWGV 115
|
Length = 134 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 43/221 (19%)
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I NG+D + ++P D + L+ E+GLP + +IG + RL
Sbjct: 164 IPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLH 203
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
QK L A +K+ +L G P LE L + + +
Sbjct: 204 PQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE-LGLEDKVILLGERSDV 262
Query: 473 --IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 529
++ D ++ S E + L AM G +P+VA+ G + V + TGF
Sbjct: 263 PALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVGDNAELVGD--TGF------- 312
Query: 530 DCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKN 564
V P D A++ + LA G A + +N
Sbjct: 313 ---LVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 372
I +SD V VS +E EL +I + I+ I N +D +
Sbjct: 141 SIEKSDGVTAVSESLKEETY-------ELFDIDKP--IEVIPNFVDTDRY---------- 181
Query: 373 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI---GF--IGRLEEQKGSDILAAAIPHF 427
+ AL+ ++G P D + +I F + R+E D++ +
Sbjct: 182 ----------RRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVE-----DVIE--VFAR 223
Query: 428 IKENV--QIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGADFIL 481
+++ V +++++G G + P E+ + +L + F +++ +D L
Sbjct: 224 VQQEVPAKLLLVGDGPERSPAEQLVRELGL------TDRVLFLGKQDDVAELLSISDLFL 277
Query: 482 IPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 522
+PS E GL L AM G VP++AS GG+ + VE G TGF
Sbjct: 278 LPSEKESFGLAALEAMACG-VPVIASNAGGIPEVVEHGVTGF 318
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIV 436
V D E+L+A GL PV+ G L KG ++L A+P + + +V+++V
Sbjct: 165 VPDPPAEPPESLKALGGLD---GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLV 221
Query: 437 LGTGKKPMEKQLEQLEILYPEKAR-GVAK---FN---IPLA--HMIIAGADFILIPSRFE 487
G + Y R G+A F +P + + AD +++P R
Sbjct: 222 AG---ETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA 278
Query: 488 PC---GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544
G++ A+ +G P++++ G + V +G TG V P D AA++
Sbjct: 279 DQTQSGVLAY-AIGFG-KPVISTPVGHAEEVLDGGTGL----------LVPPGDPAALAE 326
Query: 545 TVRRALATYGTQALAEMMKNG--MAQDLSW 572
+RR LA + + A+ +SW
Sbjct: 327 AIRRLLADP--ELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
+++ AD L+PS E GL L AM G + ++ GG+ + V+ G TGF
Sbjct: 267 LLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGF 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 59/371 (15%), Positives = 114/371 (30%), Gaps = 86/371 (23%)
Query: 153 RFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK-IYGPRTGEDYQDNQLRFSLLCQAALEAP 211
G+ R + L + K + + G + L
Sbjct: 8 FLASRRPTGIGRYARE----LLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPR 63
Query: 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271
R+L +G ++ + H P + + +G VV IH++
Sbjct: 64 RLLWGLLFLLRAGDRLLLLLLGLDLLH---SPHNTAPLLRLRG----VPVVVTIHDLIP- 115
Query: 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL 331
F + ++ R ++ + +D ++TVS ++L
Sbjct: 116 --------------------LRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155
Query: 332 VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM------DAKPL 385
+ +Y+GV D V+ +P
Sbjct: 156 L-----------------------------------RYLGVPPDKIVVIPLGVDPRFRPP 180
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKP 443
EA + R P ++G +E +K + L A + + +++++G
Sbjct: 181 PAEAEVLRALYLLPR--PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWL 238
Query: 444 MEKQLEQLEILYPEKARGVAKF--NIPLAHM--IIAGADFILIPSRFEPCGLIQLHAMRY 499
E+ L +L L +F + + + GA + PS +E GL L AM
Sbjct: 239 NEELLARLREL---GLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMAC 295
Query: 500 GTVPIVASTGG 510
GT P++AS
Sbjct: 296 GT-PVIASNIS 305
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 43/197 (21%)
Query: 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPM 444
E P + ++ +GRL E+KG D L A+ + IV G G P+
Sbjct: 166 ERFPPRPPPPPGEPLRIL-SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDG--PL 221
Query: 445 EKQLEQLEILYPEKARGVAKFNIPL-----AHMIIA---GAD-FILIPSRFEPCGLIQ-- 493
+LE L G+ + L + AD F+L PS G +
Sbjct: 222 RDELEAL-----IAELGLED-RVTLLGAKSQEEVRELLRAADLFVL-PSVTAADGDREGL 274
Query: 494 ----LHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
+ AM G +P++++ G+ + VE+G TG V P D A++ + R
Sbjct: 275 PVVLMEAMAMG-LPVISTDVSGIPELVEDGETGL----------LVPPGDPEALADAIER 323
Query: 549 ALATYGTQALAEMMKNG 565
L + EM + G
Sbjct: 324 LLDD--PELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 404 VIGFIGRLEEQKGSDILAAAIPHF------IKENVQIIVLGTGKKPMEKQLEQLEILYPE 457
V+G +GRL+ K L A E ++++++G G P EQ+
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PARGACEQMV----- 248
Query: 458 KARGVA--------KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 508
+A G+A + ++P ++ D ++PS E L AM G +P++A+
Sbjct: 249 RAAGLAHLVWLPGERDDVP---ALMQALDLFVLPSLAEGISNTILEAMASG-LPVIATAV 304
Query: 509 GGLVDTVEEGFTG 521
GG + V+ G TG
Sbjct: 305 GGNPELVQHGVTG 317
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQ 450
D + I I RL +KG D+L IP K NV+ I+ G G P LE+
Sbjct: 190 DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDG--PKRILLEE 241
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD--ILAAAIPHFIKE---NVQIIVLGTGK 441
+ L P+ + PVI GRL KG + I A A +K+ +V ++++G +
Sbjct: 170 ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR---LKKDDPDVHLLIVGDAQ 226
Query: 442 KPMEKQLEQLEILYPEKARGVAKF-----NIPLAHMIIAGADFILIPS-RFEPCGLIQLH 495
E LE++ + F ++P A+ + AD ++ S E G +
Sbjct: 227 GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYAL---ADIVVSASTEPEAFGRTAVE 283
Query: 496 AMRYGTVPIVASTGGLVDTVEEGFTGF 522
A G I + GG +TV G TG
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGL 310
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 403 PVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459
P+I ++GRL +K D L +P ++ +G G P ++LE++
Sbjct: 264 PLIVYVGRLGAEKNLDFLKRVMERLP-----GARLAFVGDG--PYREELEKM-------- 308
Query: 460 RGVAKFNIPLAHMI--------IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG 510
A M+ A D ++PS E G + L AM G VP+VA+ GG
Sbjct: 309 --FAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG 365
Query: 511 LVDTV---EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563
+ D + +EG TGF VD + V+ ++ +R G A E+ K
Sbjct: 366 IPDIIPPDQEGKTGFLYTPGDVD-DCVEKLETLLADPELR---ERMGAAAREEVEK 417
|
Length = 465 |
| >gnl|CDD|222577 pfam14172, DUF4309, Domain of unknown function (DUF4309) | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 17/89 (19%)
Query: 120 RVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG- 178
+A +D Y ++ G +I ++R F + G+ + K G
Sbjct: 38 SPDYVANAFDLYATYMGPNLAFGYNKGGQIFEIRSFDTNLEGI------TLKEIKKQLGE 91
Query: 179 -------KTQSKIYGPRTGEDYQDNQLRF 200
KT KIY + G+DY +L F
Sbjct: 92 PDSVVTTKTDEKIYVYKVGKDY---ELLF 117
|
This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homologue of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length. Length = 133 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 611 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 100.0 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.97 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.88 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.87 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.86 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.85 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.84 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.78 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.78 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.77 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.76 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.74 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.72 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.69 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.67 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.59 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.56 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.5 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.5 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.48 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.38 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.35 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.33 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.3 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.3 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.23 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.17 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.14 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.12 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.1 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 99.1 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.08 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 98.99 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.93 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.83 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.72 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.69 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.59 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.57 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.53 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.48 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.45 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.44 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.41 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.36 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.33 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.26 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.25 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.02 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 97.97 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.88 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.85 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.78 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.49 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.35 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.28 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 97.17 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.12 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 97.04 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 96.97 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.88 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 96.87 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.85 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.65 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.49 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.29 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 96.16 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.42 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 95.07 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.12 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 93.03 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 92.82 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 92.53 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 92.26 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 92.18 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 91.7 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 91.35 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 90.36 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 89.88 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 89.65 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 89.63 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 89.45 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 88.75 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 87.28 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 86.43 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 86.25 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 86.04 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 84.92 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 84.7 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 84.45 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 84.04 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.74 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 82.33 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 81.77 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 81.64 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 81.02 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 80.92 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 80.61 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-68 Score=599.24 Aligned_cols=468 Identities=33% Similarity=0.567 Sum_probs=394.2
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccC-CC----ceEEEEEeCCeeeEEEEE
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DT----DVVIELKVGDKIEKVRFF 155 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~ 155 (611)
+.++|||+||++|+.|+.++||++++++.|+++|++.||+|.||+|.|+.....+ .. .......+++.....+++
T Consensus 478 ~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 557 (977)
T PLN02939 478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW 557 (977)
T ss_pred CCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence 3568999999999999999999999999999999999999999999998765221 11 112222344445567888
Q ss_pred EeeecCceEEEEeC--c-cchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEE
Q 007247 156 HCHKRGVDRVFVDH--P-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 232 (611)
Q Consensus 156 ~~~~~gv~~~~i~~--~-~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dviv 232 (611)
+...+||++|||++ | .||.+ ..+|+ +.|+..||.+||+++++++..+.+ +|| ||
T Consensus 558 ~~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-II 614 (977)
T PLN02939 558 TGTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-II 614 (977)
T ss_pred EEEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EE
Confidence 88889999999984 3 36665 57886 689999999999999999987754 699 99
Q ss_pred EecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHH
Q 007247 233 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312 (611)
Q Consensus 233 h~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 312 (611)
|||||++++++.+++..+...+ +.++|+|+||||+.|||.|+...+..++++...+... +++... +...+|+++.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998555444443333 3678999999999999999988888888887654321 221111 2356899999
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
++..||.|+|||+.+++++.. .+|..++..++ ..++.+|+||+|.+.|+|.++++++.+|++.++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999986 35555555553 468999999999999999999999999999997 5999999999
Q ss_pred HHHhCCCCC-CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHHHHHHHHHCC--CceEEecccC
Q 007247 391 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 466 (611)
Q Consensus 391 ~~~~gl~~~-~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~ 466 (611)
++++|++.+ ++.|+|+|+||+.++||++.+++|+..+.+++++|+|+|+|+ ..+++.++.+...++ +++.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 567899999999999999999999998877789999999996 456788888888774 4688888899
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec---------CcceEEecccccccccCCcc
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~l~~~~~~~~~~v~~~ 537 (611)
....+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799998 999
Q ss_pred CHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 538 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 538 d~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
|+++++++|.+++..+ +++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 378889999999999999999999999999999864
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-67 Score=575.08 Aligned_cols=467 Identities=38% Similarity=0.615 Sum_probs=388.7
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCce-EEEEEeCCeeeEEEEEEeeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|++|||+||++|+.|+.++||+++++..|+++|+++||+|.|+.|.|++..+...... ...+.+.. ....++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5689999999999999999999999999999999999999999999998754433321 12222110 114677788889
Q ss_pred CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 161 gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
||+++|+++|.||.| .+.+|++..|.+|.||..||.+||++++++++.+.. .++|| |||+|||+++
T Consensus 80 ~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~~ 145 (485)
T PRK14099 80 GLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQAG 145 (485)
T ss_pred CceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHHH
Confidence 999999999999886 124898888888999999999999999998876521 13699 9999999999
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
++|.+++.... .++|+|+|+||..+|+.|+...+..++++...+.. ++.. +.+.+++++.++..||.|
T Consensus 146 l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 146 LAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADRI 213 (485)
T ss_pred HHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCee
Confidence 99998874221 36899999999999999987777777777655431 1111 123457899999999999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
+|||+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|+..++ .+|..++..+++++|++.
T Consensus 214 itVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 291 (485)
T PRK14099 214 TTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDP 291 (485)
T ss_pred eecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCc
Confidence 9999999999985 22344333333 2358999999999999999999999999999876 577788899999999987
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++.++|+++||+.++||++.|++|++++.+++++|+|+|+|+..+++.++++..++++++..+.+++.++.+.++++||
T Consensus 292 ~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aD 371 (485)
T PRK14099 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGAD 371 (485)
T ss_pred ccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCC
Confidence 66788999999999999999999999999877899999999987788899999888887775566677666655567899
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC---------cceEEecccccccccCCccCHHHHHHHHHH-
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR- 548 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~- 548 (611)
++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.+
T Consensus 372 ifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~a 441 (485)
T PRK14099 372 ALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRKT 441 (485)
T ss_pred EEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred --HHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 549 --ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 549 --ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
++++ ++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 442 ~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 442 AALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 4444 77889999999999999999999999999999753
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=571.43 Aligned_cols=468 Identities=29% Similarity=0.575 Sum_probs=391.9
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCccccc-CCC-c----eEEEEEeCCeeeEEEEEEe
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D----VVIELKVGDKIEKVRFFHC 157 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~ 157 (611)
+|||+||++|+.|+.|+||+++++..|+++|+++||+|.|+.|.|+...+. +.. . ..+.+.++......+....
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 399999999999999999999999999999999999999999999887653 111 1 1222333332223333222
Q ss_pred ee--cCceEEEEeCccchhhhcCCCCccccCCC-CCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEe
Q 007247 158 HK--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234 (611)
Q Consensus 158 ~~--~gv~~~~i~~~~~~~~~~~~~~~~iy~~~-~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~ 234 (611)
.. .||++++++++.||.| ..+|+.. .|.+|.||..||.+||++++++++.+.+ +|| |||+
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH~ 147 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIHC 147 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEe
Confidence 23 3799999999999987 6799876 6788999999999999999999887654 699 9999
Q ss_pred cCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHh
Q 007247 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 314 (611)
Q Consensus 235 hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 314 (611)
|||+++++|.+++..+.....+.++|+|+|+||..+||.++...+..+ ++..+...+. .....+++++.++
T Consensus 148 hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~i 218 (489)
T PRK14098 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTGV 218 (489)
T ss_pred cCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHHH
Confidence 999999999999876644444568999999999999998876555443 4433321110 0124578999999
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
..||.|+|||+.+++++.....+|..++..++ ..++.+|+||+|.+.|+|.+++.+..+|++.++ ++|..++..+++
T Consensus 219 ~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~ 297 (489)
T PRK14098 219 EHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLE 297 (489)
T ss_pred HhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHH
Confidence 99999999999999999752233433444443 358999999999999999999999999999876 577788999999
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 393 ~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
++|++.+++.++|+++||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..++++++.+.+.++.++++.
T Consensus 298 ~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~ 377 (489)
T PRK14098 298 EVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377 (489)
T ss_pred HhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHH
Confidence 99999888889999999999999999999999999878999999999987788899999998888899999999999999
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec----CcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
++++||++++||++|+||++++|||+||+|||++++||+.|++.+ +++|+++ ++.|+++++++|.+
T Consensus 378 ~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~ 447 (489)
T PRK14098 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGE 447 (489)
T ss_pred HHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999874 6899987 99999999999999
Q ss_pred HHHhc-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 549 ALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 549 ll~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++.+ +++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 448 ~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 448 ALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 87543 26788899999899999999999999999998864
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-63 Score=543.82 Aligned_cols=459 Identities=45% Similarity=0.773 Sum_probs=392.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC----ceEEEEEeCCeeeEEEEEEeeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|||++|++|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.+.. .....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999887654432 23445566777778888898899
Q ss_pred CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 161 gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
|+++++++++.++.+ .+.+|++ +|.++..||.+|+++++++++.+.+ +|| |||+|||+++
T Consensus 81 ~v~~~~i~~~~~~~r-----~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~~ 140 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHTA 140 (473)
T ss_pred CceEEEEECHHHcCC-----CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHHH
Confidence 999999999987764 1247865 6899999999999999999887643 699 9999999999
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+++.+++..++. .++|+|+|+|+..+++.++...+..++++..++.. ..+. ....+++++.++..||.|
T Consensus 141 ~~~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 141 LVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADRV 209 (473)
T ss_pred HHHHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCcC
Confidence 999999876521 14899999999999999887777666766544321 1111 113578999999999999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
++||+.+++++... .+|..++..+ +..++.+|+||+|.+.|+|.+++++..+|+..++ ..+...+..+++++|++.
T Consensus 210 ~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 287 (473)
T TIGR02095 210 TTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPV 287 (473)
T ss_pred eecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCc
Confidence 99999999998752 3444443322 2458999999999999999999999999998765 466667889999999987
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+.+.++.+.++.++++||
T Consensus 288 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred cCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 66789999999999999999999999999877899999999987788899999988888888888899998889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC------cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.
T Consensus 368 v~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~ 437 (473)
T TIGR02095 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRL 437 (473)
T ss_pred EEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 899987 999999999999999883
Q ss_pred c--CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 553 Y--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 553 ~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+ +++.+.+|+++++.++|||+.++++|+++|+++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 438 YRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 3 267889999999989999999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-62 Score=556.55 Aligned_cols=435 Identities=33% Similarity=0.559 Sum_probs=364.6
Q ss_pred cccccCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEE
Q 007247 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (611)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
+......+|||+||++|++|+.++||+++++..|+++|+++||+|.|++|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 44455678999999999999999999999999999999999999999999998653322111111122222223567788
Q ss_pred eeecCceEEEEeCc-cchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEec
Q 007247 157 CHKRGVDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235 (611)
Q Consensus 157 ~~~~gv~~~~i~~~-~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~h 235 (611)
...+||++++++++ .+|.+ ..+|+ |.|+..||.+||++++++++.+.+ +|| |||+|
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaH 716 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCH 716 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEEC
Confidence 88899999999976 36554 45775 789999999999999999887654 699 99999
Q ss_pred CCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhh
Q 007247 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315 (611)
Q Consensus 236 d~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 315 (611)
||++++++.+++..++..+ +.++|+|+|+|++.++. +.++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999987654333 26789999999865421 34667889
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
.+|.|+|||+.+++++... ..+.. +..++.+|+||+|++.|+|.++++++.+|++.++..+|...+..+++++|
T Consensus 761 ~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 9999999999999998752 12211 12489999999999999999999999999999988888888999999999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHHHHHHHHH----CCCceEEecccChHHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL----YPEKARGVAKFNIPLA 470 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~----~~~~v~~~~~~~~~~~ 470 (611)
++. ++.|+|+|+|||.++||++.|++|+.++.+.+++|+|+|+|+ ..+++.+++++.. +++++.+.+.++..+.
T Consensus 835 L~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 983 357899999999999999999999999877789999999995 3466777777774 4567888888888888
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC-------------cceEEecccccccccCCcc
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~l~~~~~~~~~~v~~~ 537 (611)
+.+|++||++|+||++|+||++++|||+||+|||++++||+.|+|.++ .|||+| ++.
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~ 983 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGA 983 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCC
Confidence 889999999999999999999999999999999999999999999884 699998 999
Q ss_pred CHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 538 DVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 538 d~~~la~~i~~ll~~~-~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
|+++++.+|.+++.++ + +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999875 2 355688899999999999999999999999875
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-62 Score=534.06 Aligned_cols=453 Identities=41% Similarity=0.682 Sum_probs=376.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC-ceEEEEEeCCeeeEEEEEEe--eecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHC--HKRG 161 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~g 161 (611)
|||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.... ....++ +..+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 89999999999999999999999999999999999999999999876543211 111111 12333333 4589
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
+++++++++.++.+ ..+|+ |.++..||.+|+++++++++.+.+ +|| |||+|||++++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~ 131 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGL 131 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHH
Confidence 99999999988876 46776 788999999999999999887753 699 99999999999
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
++.+++..+ ..+ +.++|+|+|+|+..++|.++...+..++++..++. .+... .....++++.++..||.|+
T Consensus 132 ~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~vi 202 (466)
T PRK00654 132 IPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRVT 202 (466)
T ss_pred HHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcCe
Confidence 999998764 222 35789999999999999888776766777655432 11111 1134688999999999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|+..++ +++...+..+++++|++.
T Consensus 203 tvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~- 279 (466)
T PRK00654 203 TVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD- 279 (466)
T ss_pred eeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC-
Confidence 999999999875 12332222222 2458999999999999999999889999988775 477778889999999983
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..+++.++.....++.+..+.++++||+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 35689999999999999999999999998779999999999877888999999998877777777888888889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC------cceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
+++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ +++|+++++++|.++++.+
T Consensus 360 ~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~ 429 (466)
T PRK00654 360 FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELY 429 (466)
T ss_pred EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999988 899987 9999999999999998754
Q ss_pred C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 554 G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 554 ~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
. ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 430 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 430 RQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred cCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 2 5668899999988999999999999999998864
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=509.78 Aligned_cols=462 Identities=44% Similarity=0.745 Sum_probs=385.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceE----EEEEeCCeeeEEEEEEeeecC
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (611)
||+||++|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+..... ..+..++....++..+...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 7999999999999999999999999999999999999999999987665443222 223455566778888888999
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
|+++++++|.++.+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +|| |||+|||++++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~~ 142 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTGL 142 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHHH
Confidence 99999999988875 3444 444556889999999999999999887643 699 99999999999
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
++.+++..+.. ..+.++|+|+|+|+..+++.++...+...+.+..... .... .......++++.++..||.|+
T Consensus 143 ~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~ad~v~ 215 (476)
T cd03791 143 VPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELF---HIDG---LEFYGQVNFLKAGIVYADAVT 215 (476)
T ss_pred HHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchh---hhcc---cccCCcccHHHHHHHhcCcCe
Confidence 99999876533 2335899999999999999887665544443321000 0111 112245688999999999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++|+.+++++.+ ..+|..++..+ +..++.+|+||+|.+.|.|..++.+...|+.. ....+...+..+++++|++.+
T Consensus 216 ~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~~ 293 (476)
T cd03791 216 TVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPVD 293 (476)
T ss_pred ecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCcC
Confidence 999999999875 22333333333 23589999999999999999888888888854 446777888999999999866
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
++.++|+|+||+.++||++.++++++++.+.+++|+|+|+|+..+++.++++..++++++.+...++.+..+.++++||+
T Consensus 294 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 294 PDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 78899999999999999999999999998777999999999877888899998887778888888888888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCc------ceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
+++||++|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.+
T Consensus 374 ~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~ 443 (476)
T cd03791 374 FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALY 443 (476)
T ss_pred EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 99987 9999999999999999865
Q ss_pred C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 554 G-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 554 ~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 444 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 444 RDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred cCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 3 678899999999999999999999999996
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-58 Score=495.76 Aligned_cols=464 Identities=39% Similarity=0.640 Sum_probs=398.9
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCc----eEEEEEeCCeeeEEEEEEeeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|||+++++|+.|..++||+++++..|+++|++.||+|.|+.|.|+...+.|... ....+..++........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777766653 2233334443333333333333
Q ss_pred -CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc
Q 007247 161 -GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (611)
Q Consensus 161 -gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~ 239 (611)
|++.++++++.++.|- ....| .|.|+.+||..|++++.+........ ..|| |||+||||+
T Consensus 81 ~~v~~~lid~~~~f~r~----~~~~~------~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWqt 141 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----DSTLY------GYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQT 141 (487)
T ss_pred CCCcEEEecChhhcCcc----ccccC------CCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHHH
Confidence 3999999998888751 12333 48999999999999999988665410 2599 999999999
Q ss_pred chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccE
Q 007247 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (611)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 319 (611)
+++|.+++..+. + ...+|.|||+||+.+||.|+......+++|..++..+ ....+ ..++++|.++..||.
T Consensus 142 ~L~~~~lk~~~~--~-~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~-~l~~~------~~~~~lK~gi~~ad~ 211 (487)
T COG0297 142 GLLPAYLKQRYR--S-GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASF-GLEFY------GQISFLKGGLYYADA 211 (487)
T ss_pred HHHHHHHhhccc--c-cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhc-eeeec------CcchhhhhhheeccE
Confidence 999999998641 1 1589999999999999999977778999998765521 11111 346899999999999
Q ss_pred EEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007247 320 VLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 397 (611)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 397 (611)
|.+||+.+++++. ...+|..++..++ ..++.+|.||+|...|+|.+++++..+|+..+.. +|..++..++.++|++
T Consensus 212 vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~ 289 (487)
T COG0297 212 VTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLD 289 (487)
T ss_pred EEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCC
Confidence 9999999999998 3667777666664 3688999999999999999999999999999886 5889999999999999
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 398 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 398 ~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
.+.+.|++.++|||..|||+|.+++++..+.+..++++++|+|+..+++.+..++..+++++.....++.+..+.++++|
T Consensus 290 ~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~aga 369 (487)
T COG0297 290 VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGA 369 (487)
T ss_pred CCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcC
Confidence 88888999999999999999999999999999889999999999899999999999999989999999999999999999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec--------CcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
|++++||++||||+++++||++|+++|+..+||++|+|.+ ..|||+| .+.++++++.+|.++
T Consensus 370 D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA 439 (487)
T COG0297 370 DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRA 439 (487)
T ss_pred CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 5899998 888999999999999
Q ss_pred HHhcC-HHH-HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 550 LATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 550 l~~~~-~~~-~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+.-+. ++. ++.+..++|..+|||+..+++|.++|+.++..
T Consensus 440 ~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 440 LVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence 98764 344 88889999999999999999999999999864
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=357.13 Aligned_cols=473 Identities=18% Similarity=0.240 Sum_probs=363.9
Q ss_pred EEEEeeeec-----CccccccHHHHhccchHHHHhCCCeEEEEeecCCcc--c-------------ccCC-------C--
Q 007247 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY--K-------------DAWD-------T-- 137 (611)
Q Consensus 87 Il~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~--~-------------~~~~-------~-- 137 (611)
|++++.||. |. ..||+|.......++++..|...+.++..|... . +.|+ .
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 455666654 42 579999999999999999999999999876421 0 1121 1
Q ss_pred -----ceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCc-cccCCCCCCCCcchHHHHHHHHHHHHHhh
Q 007247 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAP 211 (611)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~-~iy~~~~~~~~~~~~~r~~~~~~~~~~~~ 211 (611)
...+++++.+....++.+.....++++++++++..-...+.+... .+|++ |...+..++.+|+.+.++++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 123667777777888998888889999999988622122222322 46762 23445556699999999999
Q ss_pred HHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCC-----C--CCceEEEEEecCccccc--cCccccc--
Q 007247 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFG-- 280 (611)
Q Consensus 212 ~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~-----~--~~~k~v~~iH~~~~~~~--~~~~~~~-- 280 (611)
+.+.+ +|| |||+||||++++++.+.+.....+. + .+.+++||+|+..+||. |+...+.
T Consensus 156 ~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~ 224 (601)
T TIGR02094 156 RALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKY 224 (601)
T ss_pred HHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHH
Confidence 88764 599 9999999999999987443111110 1 14789999999999997 9877763
Q ss_pred ------ccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhh--hccceeE
Q 007247 281 ------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 352 (611)
Q Consensus 281 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~v 352 (611)
.++++...+....... +-....+++++.++..||.|.+||+.+.+..... ++ ++.+.+ +..++..
T Consensus 225 ~~~~~~~~gl~~~~~~~~~~~~----~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~-~l~~~~~~~~~~i~g 297 (601)
T TIGR02094 225 FGDYAANLGLPREQLLALGREN----PDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQ-FLYPGYEEEEVPIGY 297 (601)
T ss_pred hhhhhhHhCCCHHHHHhhhhhc----cCccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HH-hhhhhcccccCCccc
Confidence 3566655433221111 1001357999999999999999999999843320 11 111111 1236899
Q ss_pred eeCCcccCCcCCCCccccccccCcch---------------------hhhccHHHHHHHHH-------------------
Q 007247 353 IVNGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA------------------- 392 (611)
Q Consensus 353 I~Ngvd~~~~~p~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~------------------- 392 (611)
|.||||...|.|.+++.+..+|+..+ +.+.|..+|.++++
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 99999999999999999999999877 34788888988888
Q ss_pred --HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCCch------hHHHHHHHHHH--CC
Q 007247 393 --EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YP 456 (611)
Q Consensus 393 --~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~--~~ 456 (611)
++|++.+++.+++++++|+.++||++++++++.++.+ .++|||++|++.+. +++.+.+++.. ++
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 5788888899999999999999999999999888863 48999999999854 89999999988 88
Q ss_pred CceEEecccChHHHHHHHHHccEEEe-CCC-CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecc--cccccc
Q 007247 457 EKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS--FSVDCE 532 (611)
Q Consensus 457 ~~v~~~~~~~~~~~~~i~~~aDv~l~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~--~~~~~~ 532 (611)
+++.++..|+.++++.++++||++++ ||+ +|+||+..+-||..|.+.+++-.|+..|.. ++.|||.||. ...+.+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccc
Confidence 89999999999999999999999999 999 999999999999999999999999999987 6789999962 111222
Q ss_pred cCCccCHHHHHHHHHHHH-Hhc-C------HHHHHHHHHHHHHh---hCCchHHHHHHHHHH
Q 007247 533 AVDPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETL 583 (611)
Q Consensus 533 ~v~~~d~~~la~~i~~ll-~~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~~ 583 (611)
..+..|.++|-++|++.+ .-+ + +..+.++.+++|.. .|||+.++++|.++|
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 234689999999998877 322 1 45699999999987 899999999999887
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=365.11 Aligned_cols=453 Identities=18% Similarity=0.150 Sum_probs=290.3
Q ss_pred ccCCCceEEEEeeeecC---------ccccccHHHHhccchHHHHhCC--CeEEEEeecCCcccccCCCceEEEEEeCCe
Q 007247 80 VCGVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK 148 (611)
Q Consensus 80 ~~~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~ 148 (611)
...++|.|++|+.+-.| ...+||...|+.+||++|+++| |+|.++|.......-.|+.....+..-...
T Consensus 165 ~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~ 244 (1050)
T TIGR02468 165 QKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRS 244 (1050)
T ss_pred cccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccc
Confidence 34568999999875332 2367999999999999999999 999999987542221222222221110000
Q ss_pred eeEEEEEEeeecCceEEEEeCcc---chhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHH----hccCCCCC
Q 007247 149 IEKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRI----LNLNSNKY 221 (611)
Q Consensus 149 ~~~~~~~~~~~~gv~~~~i~~~~---~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~----l~~~~~~~ 221 (611)
.+..........|+.++.+.... ++.| ...+.....|...+++.++. |..+ .
T Consensus 245 ~~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~---~ 303 (1050)
T TIGR02468 245 SENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQ---I 303 (1050)
T ss_pred cccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhh---h
Confidence 00001111123577777765321 2222 01122334455555544332 1100 0
Q ss_pred CCC-CCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCC
Q 007247 222 FSG-PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300 (611)
Q Consensus 222 ~~~-~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (611)
-.| +..|| |||+|+|..+.++..++..+ ++|+|+|.|.+.-...- ..+........ .....|.
T Consensus 304 ~~~~~~~pD-vIHaHyw~sG~aa~~L~~~l-------gVP~V~T~HSLgr~K~~-----~ll~~g~~~~~--~~~~~y~- 367 (1050)
T TIGR02468 304 GSGHPVWPY-VIHGHYADAGDSAALLSGAL-------NVPMVLTGHSLGRDKLE-----QLLKQGRMSKE--EINSTYK- 367 (1050)
T ss_pred ccccCCCCC-EEEECcchHHHHHHHHHHhh-------CCCEEEECccchhhhhh-----hhccccccccc--ccccccc-
Confidence 000 11389 99999999999999999874 89999999975321100 00000000000 0000000
Q ss_pred CCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCC-ccc--chhhh-------------ccceeEeeCCcccCCcCC
Q 007247 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG-VEL--DNIIR-------------KTGIKGIVNGMDVQEWNP 364 (611)
Q Consensus 301 ~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~~~--~~~~~-------------~~~i~vI~Ngvd~~~~~p 364 (611)
..+.+..++..+..||.||++|+..++++... |+ .++ ...++ ..++.|||||+|+..|.|
T Consensus 368 --~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l--Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P 443 (1050)
T TIGR02468 368 --IMRRIEAEELSLDASEIVITSTRQEIEEQWGL--YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVP 443 (1050)
T ss_pred --hHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH--hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccC
Confidence 11344566788999999999999999876653 22 111 01111 128999999999999988
Q ss_pred CCccccccccCcc-hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc----CCcEEEEEeC
Q 007247 365 LTDKYIGVKYDAS-TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGT 439 (611)
Q Consensus 365 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~----~~~~lvivG~ 439 (611)
.....-....... ......+.....+++.+. + +++++|+|+||+.++||++.||+|+.++.+ +++. +|+|.
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~-~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~ 519 (1050)
T TIGR02468 444 HDGDMDGETEGNEEHPAKPDPPIWSEIMRFFT-N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGN 519 (1050)
T ss_pred CCccccchhcccccccccccchhhHHHHhhcc-c--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEec
Confidence 5321000000000 000000111223343332 2 366899999999999999999999999863 3565 46687
Q ss_pred CCc---------hhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHc----cEEEeCCCCCCCcHHHHHHHHcCCceE
Q 007247 440 GKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPI 504 (611)
Q Consensus 440 g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~l~pS~~E~~gl~~lEAma~G~PvI 504 (611)
++. .+...+..+..++. ++|.+.+..+.+.+..+|+.| |+|++||.+|+||++++|||+||+|||
T Consensus 520 gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVV 599 (1050)
T TIGR02468 520 RDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMV 599 (1050)
T ss_pred CchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEE
Confidence 642 12344556665554 567766666777788899887 699999999999999999999999999
Q ss_pred EcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHH
Q 007247 505 VASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 582 (611)
Q Consensus 505 ~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (611)
+|+.||+.|+|.++.+|+++ ++.|+++|+++|.+++++ ++.+.+|++++. .++|||+.++++|++.
T Consensus 600 ASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~ 667 (1050)
T TIGR02468 600 ATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSR 667 (1050)
T ss_pred EeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999999999999987 999999999999999998 777788887764 4689999999999999
Q ss_pred HHHHHHc
Q 007247 583 LLNLEVA 589 (611)
Q Consensus 583 ~~~l~~~ 589 (611)
+..+...
T Consensus 668 i~~~~~~ 674 (1050)
T TIGR02468 668 IASCRPR 674 (1050)
T ss_pred HHHHhcc
Confidence 9988753
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=345.61 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=274.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++|+..|+|. .||++.++.+|+++|.++||+|+|+|+. +.+.. |..... ...........+|+.+
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~-~~~~~-~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAP-PYYPQ-WRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecC-CCCCC-CCCCcc--------cccccceeeecCCeEE
Confidence 8999999988886 7999999999999999999999999976 11111 100000 0001112223457777
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHH-hhHHhccCCCCCCCCCCCCCeEEEecCCcc--ch
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHT--SL 241 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~--~~ 241 (611)
+++........ . ..........|...... +.+.+. .+|| |||+|.+.. ..
T Consensus 69 ~r~~~~~~~~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~ 121 (412)
T PRK10307 69 WRCPLYVPKQP---------S-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAP 121 (412)
T ss_pred EEccccCCCCc---------c-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHH
Confidence 76632110000 0 00011111112222221 222221 1699 899986443 23
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCC-cccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
.+..+++. .++|+++++|+..++..+. .+.. ..+ .......+++..++.+|.|
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~ad~i 175 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLKGGK-------------VARLATAFERSLLRRFDNV 175 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCccCcH-------------HHHHHHHHHHHHHhhCCEE
Confidence 33444443 4789999999754321110 0000 000 0001123456778899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.+ ++.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 176 i~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~-- 227 (412)
T PRK10307 176 STISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD-- 227 (412)
T ss_pred EecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC--
Confidence 9999999999875 454433 89999999999888664321 1234677788763
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCC-CceEEecccChHHHHHHHHHcc
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+.++|+|+|++.+.||++.|++|++++.+ ++++|+|+|+|+ ..+.++++...++ .++.+.+..+.+.+..+++.||
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aD 305 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMAD 305 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcC
Confidence 45799999999999999999999998865 679999999997 4566776666443 3588888778888889999999
Q ss_pred EEEeCCCCCC----CcHHHHHHHHcCCceEEcCCcc--cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
++++||..|+ +|.+++|||+||+|||+|+.|| +.|++. ++|+++ +++|+++++++|.+++++
T Consensus 306 i~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 306 CHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ 373 (412)
T ss_pred EeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999998 5778999999999999999876 457776 589987 999999999999999987
Q ss_pred cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHc
Q 007247 553 YGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+..+.+|++++. .++|||+.++++|+++|++++.+
T Consensus 374 --~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 374 --ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 666677776664 57899999999999999998753
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=347.32 Aligned_cols=391 Identities=19% Similarity=0.181 Sum_probs=255.7
Q ss_pred ccccHHHHhccchHHHHhCCC--eEEEEeecCCccc--ccCCCceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchh
Q 007247 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (611)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~ 174 (611)
..||++.++.+|+++|+++|| +|+|+|..++... ..+. .......+|++++.+.....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~~-- 85 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGPR-- 85 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCCC--
Confidence 479999999999999999997 9999997654211 1000 00122346787777643110
Q ss_pred hhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCC
Q 007247 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKG 254 (611)
Q Consensus 175 ~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~ 254 (611)
.+.. ..+-...+..+...+.+.++... .+|| |||+|+|..++++..++..
T Consensus 86 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~----- 135 (439)
T TIGR02472 86 ---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL----- 135 (439)
T ss_pred ---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH-----
Confidence 0100 00001111234444455444321 1599 9999998877777776665
Q ss_pred CCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcC
Q 007247 255 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG 334 (611)
Q Consensus 255 ~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~ 334 (611)
.++|+|+|.|+...... ..+...++.... +...+ .....+.+++..++.+|.|+++|+.........
T Consensus 136 --~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 202 (439)
T TIGR02472 136 --LGVPLIFTGHSLGREKR---RRLLAAGLKPQQ-----IEKQY---NISRRIEAEEETLAHASLVITSTHQEIEEQYAL 202 (439)
T ss_pred --hCCCEEEecccccchhh---hhcccCCCChhh-----hhhhc---chHHHHHHHHHHHHhCCEEEECCHHHHHHHHHh
Confidence 47899999996432100 000000000000 00000 001122345678889999999998655443210
Q ss_pred cCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccc
Q 007247 335 EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 414 (611)
Q Consensus 335 ~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~ 414 (611)
..+++. .++.+||||+|.+.|.|.... ......+..+ ++.+.+ ++.++|+|+||+.+.
T Consensus 203 -~~~~~~------~ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~ 260 (439)
T TIGR02472 203 -YDSYQP------ERMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDRR 260 (439)
T ss_pred -ccCCCc------cceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCccc
Confidence 123333 389999999999988765321 0001111222 233333 245799999999999
Q ss_pred cCHHHHHHHHHhccc--CCcEEE-EEeCCCc--hh-------HHHHHHHHHH--CCCceEEecccChHHHHHHHHHc---
Q 007247 415 KGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGA--- 477 (611)
Q Consensus 415 Kg~d~li~a~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~a--- 477 (611)
||++.|++|++++.. ++.+++ |+|+|+. .+ .+.+..+..+ +.+++.+.+.++.+.+..+|+.|
T Consensus 261 Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~ 340 (439)
T TIGR02472 261 KNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARS 340 (439)
T ss_pred CCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 999999999986522 234443 5687652 11 1223333443 33567776666777788899877
Q ss_pred -cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 478 -DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 478 -Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
|++++||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++++++|.+++++ +.
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~ 408 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--SS 408 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 99999999999999999999999999999999999999999999987 999999999999999998 66
Q ss_pred HHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 557 ALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 557 ~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
.+.+|++++ +.++|||+.++++|+++++
T Consensus 409 ~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 409 QWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 666676665 4689999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=344.27 Aligned_cols=387 Identities=20% Similarity=0.261 Sum_probs=273.6
Q ss_pred EEEEeeeecCcc-----ccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777766652 259999999999999999999999999763211110 0011245
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHH-HhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
+.++.+....+... ........+..|....+ .+++... .++| |||+|+|..+
T Consensus 61 ~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iih~h~~~~~ 113 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------DKEDLPTQLCAFTGGVLRAEARHEP----------GYYD-LIHSHYWLSG 113 (405)
T ss_pred cEEEEecCCCcccC----------------CHHHHHHHHHHHHHHHHHHHhhccC----------CCCC-eEEechHHHH
Confidence 66655432211110 00000011111222222 2222211 2599 8999998877
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+++.++++. .++|+|+|+|+...... ..+.....+. ......+.+..+..+|.+
T Consensus 114 ~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~~~----------------~~~~~~~e~~~~~~~d~v 167 (405)
T TIGR03449 114 QVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDTPE----------------PEARRIGEQQLVDNADRL 167 (405)
T ss_pred HHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCCCc----------------hHHHHHHHHHHHHhcCeE
Confidence 777666654 47899999996532100 0000000000 001112335678899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.. .++.+.+ ++.+|+||+|.+.|.+.+ +...+++++++.
T Consensus 168 i~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~-- 217 (405)
T TIGR03449 168 IANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL-- 217 (405)
T ss_pred EECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC--
Confidence 9999998888764 2444433 899999999998886542 334567777753
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc--CC--cEEEEEeCCCc---hhHHHHHHHHHHCC--CceEEecccChHHHH
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~--~~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (611)
+.++|+|+||+.+.||++.+++|++++.+ ++ ++|+|+|++.. ...+.++++....+ +++.+.+..+.+.+.
T Consensus 218 ~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 297 (405)
T TIGR03449 218 DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELV 297 (405)
T ss_pred CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHH
Confidence 45899999999999999999999999855 44 99999996431 24556666666554 468887777778888
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.++++
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLLD 367 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987 89999999999999998
Q ss_pred hcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ ++.+.+|+.++. .++|||+.++++|+++|.+++.
T Consensus 368 ~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 D--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred C--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 7 666677766654 4789999999999999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=343.26 Aligned_cols=364 Identities=19% Similarity=0.234 Sum_probs=256.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..|.|. .||.+.++..|+++|+++||+|+|+|+.++..... ....+|+.++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999996 89999999999999999999999999864322110 0012344444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH--
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP-- 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~-- 243 (611)
.+....+... .. +. ++......+...+.. .+|| |||+|++...+..
T Consensus 58 ~~p~~~~~~~-------~~--------~~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~~ 105 (398)
T cd03796 58 YLPFVVFYNQ-------ST--------LP----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHEA 105 (398)
T ss_pred EecceeccCC-------cc--------cc----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHHH
Confidence 4422111100 00 00 001111222222222 2699 9999986654432
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..+.+. .++|+|++.|+... .... ... ....+++..++.+|.++++
T Consensus 106 ~~~~~~-------~~~~~v~t~h~~~~-----~~~~-----~~~-----------------~~~~~~~~~~~~~d~ii~~ 151 (398)
T cd03796 106 LLHART-------MGLKTVFTDHSLFG-----FADA-----SSI-----------------HTNKLLRFSLADVDHVICV 151 (398)
T ss_pred HHHhhh-------cCCcEEEEeccccc-----ccch-----hhH-----------------HhhHHHHHhhccCCEEEEe
Confidence 222222 47899999996321 0000 000 0112445667899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+...+.+... .+.+ ..++.+||||+|...|.|...+ .+++.+
T Consensus 152 s~~~~~~~~~~--~~~~------~~k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~ 194 (398)
T cd03796 152 SHTSKENTVLR--ASLD------PERVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKI 194 (398)
T ss_pred cHhHhhHHHHH--hCCC------hhhEEEEcCccCHHHcCCCccc-----------------------------CCCCce
Confidence 99988765421 2333 2389999999999888765321 123568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..++ .+++.+.+..+.+.+..+++.||+
T Consensus 195 ~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~ 272 (398)
T cd03796 195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHI 272 (398)
T ss_pred EEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 99999999999999999999998865 789999999987 345566666554 356888887788888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH-HH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-AL 558 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~-~~ 558 (611)
+++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|.++++++|.+++++.... ..
T Consensus 273 ~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~~ 340 (398)
T cd03796 273 FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKHD 340 (398)
T ss_pred EEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhhH
Confidence 9999999999999999999999999999999999998765333 4458999999999999873222 22
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 559 AEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 559 ~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
.+.+++.+.++|||+.++++|+++|++++..
T Consensus 341 ~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 341 PWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 3334444679999999999999999998753
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=338.54 Aligned_cols=373 Identities=22% Similarity=0.286 Sum_probs=266.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++|+..|+|. ..||.+.++..|+++|.++ |+|.|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998885 5699999999999999987 8888887542210 0123333
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.+..+..... +... +..+.... ..... ..++| |||+|+|...+.+.
T Consensus 53 ~~~~~~~~~~~-----------------~~~~---~~~~~~~~---~~~~~---------~~~~d-ivh~~~~~~~~~~~ 99 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKA---LGTFSVDL---AMAND---------PVDAD-VVHSHTWYTFLAGH 99 (388)
T ss_pred EEecChhhccc-----------------hhhh---hhhhhHHH---HHhhC---------CCCCC-eEeecchhhhhHHH
Confidence 32211100000 0000 00111111 11111 12699 99999988776665
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.++.. .++|+|+++|+..+....... .+ ..++ .....+.+..+..+|.++++|
T Consensus 100 ~~~~~-------~~~p~v~~~h~~~~~~~~~~~---------~~------~~~~-----~~~~~~~~~~~~~ad~vi~~S 152 (388)
T TIGR02149 100 LAKKL-------YDKPLVVTAHSLEPLRPWKEE---------QL------GGGY-----KLSSWAEKTAIEAADRVIAVS 152 (388)
T ss_pred HHHHh-------cCCCEEEEeeccccccccccc---------cc------ccch-----hHHHHHHHHHHhhCCEEEEcc
Confidence 55443 489999999975432111000 00 0000 011123466788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+.+++.+.+.. .++.. .++.+|+||+|...|.|.. ....+++++++. +.++
T Consensus 153 ~~~~~~~~~~~-~~~~~------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~ 203 (388)
T TIGR02149 153 GGMREDILKYY-PDLDP------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRPY 203 (388)
T ss_pred HHHHHHHHHHc-CCCCc------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--CceE
Confidence 99999887521 13332 3899999999998887642 345677888763 5579
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--chhHHHHHHHHHHCCC---ceEEec-ccChHHHHHHHHHcc
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGAD 478 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~i~~~aD 478 (611)
|+|+||+.+.||++.|++|++++. ++++++++|+|. ..+.+.++++...++. ++.++. ..+.+.+..+++.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999984 578999988765 2345566665554432 355544 457778889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCH------HHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~------~~la~~i~~ll~~ 552 (611)
++++||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ +++|. ++++++|.+++++
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLAD 352 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999987 88888 9999999999998
Q ss_pred cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++.+.+|+.++. .++|||+.+++++.++|++++
T Consensus 353 --~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 353 --PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred --HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 777777777664 578999999999999999763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=347.08 Aligned_cols=376 Identities=18% Similarity=0.245 Sum_probs=264.8
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
+++|||++++... |....||.+..+.+|+++|.++||+|+++++..+. .+.+ .|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~~------------------------~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQEF------------------------HG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Cccc------------------------cC
Confidence 6789999998543 33468999999999999999999999999976321 1100 12
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc-
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS- 240 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~- 240 (611)
+.++.+.. +.. ..|.. + ...+. +...+..+++.. +|| |||+|+....
T Consensus 110 ~~v~~~~~--~~~--------~~~~~-----~---~~~~~-~~~~l~~~i~~~------------kpD-iIh~~~~~~~~ 157 (465)
T PLN02871 110 AKVIGSWS--FPC--------PFYQK-----V---PLSLA-LSPRIISEVARF------------KPD-LIHASSPGIMV 157 (465)
T ss_pred ceeeccCC--cCC--------ccCCC-----c---eeecc-CCHHHHHHHHhC------------CCC-EEEECCCchhH
Confidence 22211100 000 00000 0 00000 001122223322 699 9999975432
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+....+.+. .++|+|++.|+..... . ...... ......+.+++...+.+|.+
T Consensus 158 ~~~~~~ak~-------~~ip~V~~~h~~~~~~-~-----~~~~~~---------------~~~~~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 158 FGALFYAKL-------LCVPLVMSYHTHVPVY-I-----PRYTFS---------------WLVKPMWDIIRFLHRAADLT 209 (465)
T ss_pred HHHHHHHHH-------hCCCEEEEEecCchhh-h-----hcccch---------------hhHHHHHHHHHHHHhhCCEE
Confidence 223333333 4899999999532200 0 000000 00001123456667899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.. .+.. ...++.+|+||+|.+.|.|... ....+.++... .+
T Consensus 210 i~~S~~~~~~l~~---~~~~-----~~~kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~-~~ 261 (465)
T PLN02871 210 LVTSPALGKELEA---AGVT-----AANRIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG-EP 261 (465)
T ss_pred EECCHHHHHHHHH---cCCC-----CcCeEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-CC
Confidence 9999999999885 2321 1228999999999998876532 12234443321 12
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +.+.++++.... ++.+.+..+.+.+..+|+.||++
T Consensus 262 ~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~ 335 (465)
T PLN02871 262 EKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVF 335 (465)
T ss_pred CCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEE
Confidence 557999999999999999999999987 589999999987 567777776653 48888777878888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec---CcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 557 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~ 557 (611)
|+||..|+||++++|||+||+|||+++.||+.|++.+ +++|+++ +++|+++++++|.+++++ ++.
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~ 403 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PEL 403 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHH
Confidence 9999999999999999999999999999999999999 9999987 999999999999999997 777
Q ss_pred HHHHHHHHH--HhhCCchHHHHHHHH-HHHHHHHc
Q 007247 558 LAEMMKNGM--AQDLSWKGPAKKWEE-TLLNLEVA 589 (611)
Q Consensus 558 ~~~~~~~~~--~~~fsw~~~a~~~~~-~~~~l~~~ 589 (611)
+.+|++++. .++|||+.+++++++ +|++++..
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 777777763 478999999999998 79988864
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=345.90 Aligned_cols=422 Identities=15% Similarity=0.161 Sum_probs=269.4
Q ss_pred CceEEEEeeee----cCc---cccccHHHHhccchHHH--------HhCCC----eEEEEeecCCcccccCCCceEEEEE
Q 007247 84 GLNILFVGTEV----APW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (611)
Q Consensus 84 ~MkIl~v~~~~----~P~---~~~GG~~~~~~~La~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~~ 144 (611)
.|||++|+.+. .|. ..+||...++.+|+++| +++|| +|.|+|...+.... .+-...++..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~~ 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEKV 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-cccccccccc
Confidence 58999999886 221 13799999999999985 68999 77799977432211 0000000000
Q ss_pred eCCeeeEEEEEEeeecCceEEEEeCcc----chhhhcCCCCccccCCCCCCCCcchHH---HHHHHHHHHHHhhH-Hhcc
Q 007247 145 VGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPR-ILNL 216 (611)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~i~~~~----~~~~~~~~~~~~iy~~~~~~~~~~~~~---r~~~~~~~~~~~~~-~l~~ 216 (611)
. ..+|+.++.+.... .+.+ |..... ....|...+.+.++ ....
T Consensus 334 ~------------~~~~~~I~rvp~g~~~~~~~~~-----------------~i~k~~l~p~l~~f~~~~~~~~~~~~~~ 384 (784)
T TIGR02470 334 Y------------GTEHAWILRVPFRTENGIILRN-----------------WISRFEIWPYLETFAEDAEKEILAELQG 384 (784)
T ss_pred c------------CCCceEEEEecCCCCccccccc-----------------ccCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 01244444432110 0000 122221 22334444444332 2221
Q ss_pred CCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCccccccccccc
Q 007247 217 NSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296 (611)
Q Consensus 217 ~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
+|| +||+|.|.+++++..++... ++|.++|.|....... .............+
T Consensus 385 ----------~pD-lIHahy~d~glva~lla~~l-------gVP~v~t~HsL~~~K~-~~~g~~~~~~e~~~-------- 437 (784)
T TIGR02470 385 ----------KPD-LIIGNYSDGNLVASLLARKL-------GVTQCTIAHALEKTKY-PDSDIYWQEFEDKY-------- 437 (784)
T ss_pred ----------CCC-EEEECCCchHHHHHHHHHhc-------CCCEEEECCcchhhcc-cccccccccchhHH--------
Confidence 599 99999999999998888774 8999999997643111 00000000000000
Q ss_pred CCCCCCCCcchhHhHHHhhhccEEEecCHHHHHH----HH---cCc------CC----CcccchhhhccceeEeeCCccc
Q 007247 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE----LV---SGE------DK----GVELDNIIRKTGIKGIVNGMDV 359 (611)
Q Consensus 297 ~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~----l~---~~~------~~----g~~~~~~~~~~~i~vI~Ngvd~ 359 (611)
. ....+.....++..||.||+.|...... +. +.. .+ |++. .+.++.+|++|+|.
T Consensus 438 ----~-~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD~ 508 (784)
T TIGR02470 438 ----H-FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGADE 508 (784)
T ss_pred ----H-hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcCh
Confidence 0 0001122345678899999999754331 11 100 01 2211 12488999999999
Q ss_pred CCcCCCCccccccccC-cchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEE
Q 007247 360 QEWNPLTDKYIGVKYD-ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIV 436 (611)
Q Consensus 360 ~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvi 436 (611)
..|.|.+.+.- +.. ...-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|
T Consensus 509 ~iF~P~~~~~~--r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVI 586 (784)
T TIGR02470 509 SIYFPYSDKEK--RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVV 586 (784)
T ss_pred hhcCCCCchhh--hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEE
Confidence 98877543100 000 000000001134455678887666788999999999999999999999987643 5799999
Q ss_pred EeCCCc----------hhHHHHHHHHHHCC--CceEEeccc-ChHHHHHHH---H-HccEEEeCCCCCCCcHHHHHHHHc
Q 007247 437 LGTGKK----------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRY 499 (611)
Q Consensus 437 vG~g~~----------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~i~---~-~aDv~l~pS~~E~~gl~~lEAma~ 499 (611)
+|++.. ...+.+.+++.+++ +++.+.+.. +......++ + .+|++++||++|+||++++|||+|
T Consensus 587 VGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc 666 (784)
T TIGR02470 587 VAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC 666 (784)
T ss_pred EeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc
Confidence 998642 13345666776664 567766543 322233333 3 468999999999999999999999
Q ss_pred CCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh--cCHHHHHHHHHHHH---HhhCCchH
Q 007247 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKG 574 (611)
Q Consensus 500 G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~ 574 (611)
|+|||+|+.||+.|+|.++.+|+++ ++.|+++++++|.++++. .++..+.+++++++ .++|||+.
T Consensus 667 GlPVVAT~~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 667 GLPTFATRFGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKI 736 (784)
T ss_pred CCCEEEcCCCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999987 999999999999998742 13777888888775 58999999
Q ss_pred HHHHHHHHH
Q 007247 575 PAKKWEETL 583 (611)
Q Consensus 575 ~a~~~~~~~ 583 (611)
.+++++++.
T Consensus 737 ~A~~ll~l~ 745 (784)
T TIGR02470 737 YSERLLTLA 745 (784)
T ss_pred HHHHHHHHH
Confidence 999999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=327.63 Aligned_cols=362 Identities=16% Similarity=0.263 Sum_probs=259.7
Q ss_pred ceEEEEeeeecCc--cccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P~--~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
-||+|+.++-.|. ...||++.++.++++.|++ +|+++|...+.+++.. ...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~---------------------~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYT---------------------KVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchh---------------------hccCCC
Confidence 3788887764433 3689999999999999953 9999998866544320 112345
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
+++.+..+....+.. ++.+. . +...+.+.+...+..... .++| |||+|+... +.
T Consensus 59 ~~~~~~~~~~~~~~~----~~~~~--------~---~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~ 112 (380)
T PRK15484 59 DIHYIGFSRIYKRLF----QKWTR--------L---DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LY 112 (380)
T ss_pred ceEEEEeccccchhh----hhhhc--------c---CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hH
Confidence 555442221111000 00000 0 011223333333322211 1478 999997432 22
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
. .++.. ++++|+++++|+.. ....+..++.+++
T Consensus 113 ~-~~~~~------~~~~~~v~~~h~~~----------------------------------------~~~~~~~~~~ii~ 145 (380)
T PRK15484 113 R-QIRER------APQAKLVMHMHNAF----------------------------------------EPELLDKNAKIIV 145 (380)
T ss_pred H-HHHhh------CCCCCEEEEEeccc----------------------------------------ChhHhccCCEEEE
Confidence 2 22222 26889999999531 1112346799999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|++.++.+.+. .+ ..++.+||||+|...|.+.. ...++++++++. +.
T Consensus 146 ~S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~ 193 (380)
T PRK15484 146 PSQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DE 193 (380)
T ss_pred cCHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CC
Confidence 999999988752 11 23789999999988776542 334566777753 44
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-------chhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
++|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|. ..+.+.++++...++.++.+.+..+.+.+..+
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~ 273 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNY 273 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 789999999999999999999999865 789999999875 23566777777777777888887788888899
Q ss_pred HHHccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 474 IAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 474 ~~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++
T Consensus 274 ~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC
Confidence 9999999999986 99999999999999999999999999999999999953 3789999999999999998
Q ss_pred cCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++ +.++++++ ..++|||+.++++|+++|++..
T Consensus 345 --~~-~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 345 --PE-LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred --HH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 43 24555555 4689999999999999998753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-37 Score=328.43 Aligned_cols=275 Identities=20% Similarity=0.231 Sum_probs=219.1
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
++| +||+|.++.+.....++.... .+.|+++++|+...... . . ....
T Consensus 118 ~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------~----~--------------~~~~ 164 (406)
T PRK15427 118 VAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------E----V--------------LNHY 164 (406)
T ss_pred CCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------h----h--------------hhhh
Confidence 699 999998877666666654211 24567889995432100 0 0 0011
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
...++..++++|.++++|+..++.+.+ +|++.+ ++.+|+||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999875 565544 89999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEe
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 462 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 462 (611)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01234679999999999999999999999975 589999999997 5667777776654 568888
Q ss_pred cccChHHHHHHHHHccEEEeCCCC------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+..+.+.+..+++.||++++||.. |++|++++|||+||+|||+|+.||+.|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 877888888999999999999974 99999999999999999999999999999999999987 99
Q ss_pred cCHHHHHHHHHHHHH-hcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 537 ~d~~~la~~i~~ll~-~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
+|+++++++|.++++ + ++.+.+|++++ +.++|+|+..++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 66666666665 468999999999999999863
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=321.28 Aligned_cols=364 Identities=23% Similarity=0.247 Sum_probs=257.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++. |. .||.+.++..|+++|+++||+|++++...+...... ..++..
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 43 699999999999999999999999997532111100 001111
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
..++.+.+-. .. ... . . ......+.++++. ++|| |||+|.+.....+.
T Consensus 53 ~~~~~~~~~~----------~~------~~~-~-~-~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~~ 100 (371)
T cd04962 53 HEVEVPQYPL----------FQ------YPP-Y-D-LALASKIAEVAKR------------YKLD-LLHVHYAVPHAVAA 100 (371)
T ss_pred EEecccccch----------hh------cch-h-H-HHHHHHHHHHHhc------------CCcc-EEeecccCCccHHH
Confidence 1111110000 00 000 0 0 0122333333332 2699 99999765544343
Q ss_pred HHHH-hccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 245 YLKT-MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 245 ~l~~-~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
.+.. ..+. .++|+++++|+...... +.. .....+.+..++.+|.++++
T Consensus 101 ~~~~~~~~~----~~~~~i~~~h~~~~~~~---------~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 101 YLAREILGK----KDLPVVTTLHGTDITLV---------GQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHhcCc----CCCcEEEEEcCCccccc---------ccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 3332 2211 37899999996432100 000 01123556778899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+...+.+... ++ . ..++.+|+||+|...+.+.. ....+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 11 1 23799999999987765542 223456667653 457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+++++||+.+.||++.++++++++.+ .+++|+|+|+|+ ..+.++++..+.+ +++.+.+.. +.+..+++.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEE
Confidence 89999999999999999999999876 579999999997 3455556555543 457766643 3466899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
++||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ +..+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 999999999999999987 667777
Q ss_pred HHHHHH---HhhCCchHHHHHHHHHHHHH
Q 007247 561 MMKNGM---AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 561 ~~~~~~---~~~fsw~~~a~~~~~~~~~l 586 (611)
|++++. .++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 766653 68999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=317.10 Aligned_cols=373 Identities=17% Similarity=0.175 Sum_probs=249.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
|||||...||+. ...|+++|+++||+|+++|+....... . ||+++
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~-----------------~---------~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP-----------------G---------GVRVV 45 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC-----------------C---------CeeEE
Confidence 699999987543 456999999999999999987332111 0 34444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+..-. .....|...........+++.+.+..+..+ .++|| |||+|.... ...+
T Consensus 46 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pd-vi~~h~~~~--~~~~ 102 (396)
T cd03818 46 RYRPPRGPT-------------SGTHPYLREFEEAVLRGQAVARALLALRAK-------GFRPD-VIVAHPGWG--ETLF 102 (396)
T ss_pred EecCCCCCC-------------CCCCccchhHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECCccc--hhhh
Confidence 443211100 011124444433333333344433333211 24699 899995322 2334
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC--Cc---chhHhHHHhhhccEE
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR--GR---KINWMKAGILESDMV 320 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~k~~~~~ad~v 320 (611)
++..+ +++|+|.++|-... .. . ...+. ......... .+ ...+....+..+|.+
T Consensus 103 l~~~~------~~~~~v~~~~~~~~-~~-~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 103 LKDVW------PDAPLIGYFEFYYR-AE-G----ADVGF----------DPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred HHHhC------CCCCEEEEEeeeec-CC-C----CCCCC----------CCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 55443 67899888763211 00 0 00000 000000000 00 011134568899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|++.++.+.+. + ..++.+|+||+|.+.|.|.... ....+...+++ +
T Consensus 161 i~~s~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~ 209 (396)
T cd03818 161 VSPTRWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--P 209 (396)
T ss_pred ECCCHHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--C
Confidence 99999999887641 1 1389999999999988765321 11111112222 3
Q ss_pred CCcEEEEEcC-cccccCHHHHHHHHHhccc--CCcEEEEEeCCCc-----------hhHHHHHHHHHHC-CCceEEeccc
Q 007247 401 NIPVIGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKF 465 (611)
Q Consensus 401 ~~~~il~iGr-l~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~-~~~v~~~~~~ 465 (611)
+.++|+|+|| ++++||++.+++|++++.+ ++++|+|+|++.. ..++.++++.... .+++.+.+..
T Consensus 210 ~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v 289 (396)
T cd03818 210 GDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRV 289 (396)
T ss_pred CCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCC
Confidence 5578999998 9999999999999999875 7999999997421 1223344444321 2568888888
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
+.+.+..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~ 359 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAA 359 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007247 546 VRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 546 i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
|.+++++ ++.+.+|++++ +.++|||+.++++|++
T Consensus 360 i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 360 VIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999998 66666666666 4577999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=332.73 Aligned_cols=322 Identities=17% Similarity=0.182 Sum_probs=220.8
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
.|| +||+|.|.+++++..++... ++|.|+|.|...-... ...+..+-.....+ ... ..
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y------------~~~-~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKY-PDSDIYWKKFDDKY------------HFS-CQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhc-cccCCcccccchhh------------hhh-hc
Confidence 599 99999999999999999875 9999999997643111 11100000001110 000 11
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHH-------HcCcCCCcc-cchhh-----hccceeEeeCCcccCCcCCCCccc--cc
Q 007247 307 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDKY--IG 371 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~~i~vI~Ngvd~~~~~p~~~~~--~~ 371 (611)
+.....++..||.||+.|......+ .++..+..+ +.+++ ...++.+|++|+|...|.|..... +.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2344567889999999998776422 221111111 01110 022889999999999887754210 00
Q ss_pred cccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-c----hh
Q 007247 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K----PM 444 (611)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-~----~~ 444 (611)
.-++.. +.........++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|+|. + ..
T Consensus 546 ~l~n~I---~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPSI---EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcccc---hhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 000000 0111123334567787666678899999999999999999999998754 579999999872 1 11
Q ss_pred -----HHHHHHHHHHCC--CceEEecccC----hHHHHHHHH-HccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc
Q 007247 445 -----EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 512 (611)
Q Consensus 445 -----~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~i~~-~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 512 (611)
.+.+.++..+++ +++.+.+... .+.+..+++ .+|++++||.+|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 134556666654 5566654322 233444555 5799999999999999999999999999999999999
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh--cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAKKWEETL 583 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (611)
|+|.+|.+|+++ ++.|+++++++|.++++. .+++.+.+|+++++ .++|||+.++++++++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999987 999999999999887641 12778888888774 47899999999998866
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=312.10 Aligned_cols=359 Identities=18% Similarity=0.181 Sum_probs=246.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC-cccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
-||++|...+ ..||++.++.+|+++|.+.||++++++.... .... .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899999764 3699999999999999999999999984321 1110 00112444
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~ 243 (611)
++.+..... ... .+...+..+++.. +|| |||+|...+.. .
T Consensus 56 ~~~~~~~~~----------------------~~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~~-~ 95 (374)
T TIGR03088 56 FYALHKQPG----------------------KDV----AVYPQLYRLLRQL------------RPD-IVHTRNLAALE-A 95 (374)
T ss_pred EEEeCCCCC----------------------CCh----HHHHHHHHHHHHh------------CCC-EEEEcchhHHH-H
Confidence 443321100 000 1122233333332 699 99999654322 2
Q ss_pred HHHHHhccCCCCCCCceE-EEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHH-HhhhccEEE
Q 007247 244 CYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA-GILESDMVL 321 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~-v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~ad~vi 321 (611)
.++... .+.|. +++.|....... .. ......++++ ....+|.++
T Consensus 96 ~~~~~~-------~~~~~~i~~~h~~~~~~~-----------~~----------------~~~~~~~~~~~~~~~~~~~i 141 (374)
T TIGR03088 96 QLPAAL-------AGVPARIHGEHGRDVFDL-----------DG----------------SNWKYRWLRRLYRPLIHHYV 141 (374)
T ss_pred HHHHHh-------cCCCeEEEeecCcccccc-----------hh----------------hHHHHHHHHHHHHhcCCeEE
Confidence 222222 23443 445553211000 00 0011234433 334689999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 401 (611)
++|+...+.+.. .++++.+ ++.+|+||+|.+.|.+.... ....+++...+ ++
T Consensus 142 ~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~~ 193 (374)
T TIGR03088 142 AVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--DE 193 (374)
T ss_pred EeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--CC
Confidence 999999998875 2444433 88999999999888665311 11222222222 35
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 473 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i 473 (611)
.++|+++||+.++||++.+++|++++.+ ++++|+++|+|+ ..+.++++...++ +.+.+.+ + .+.+..+
T Consensus 194 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~ 269 (374)
T TIGR03088 194 SVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG-E-RDDVPAL 269 (374)
T ss_pred CeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-C-cCCHHHH
Confidence 6899999999999999999999998864 279999999987 4456666666553 3344333 3 3446689
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
++.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 270 ~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~- 338 (374)
T TIGR03088 270 MQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD- 338 (374)
T ss_pred HHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999987 999999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 554 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 339 -~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 339 -PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred -HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 66666666555 4689999999999999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=302.83 Aligned_cols=329 Identities=18% Similarity=0.191 Sum_probs=236.7
Q ss_pred ceEEEEeeeecC--ccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
|||++|++.+.| ....||.+.++..|+.+|.++||+|+++++..+..... .. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~~--~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------LV--P------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------ee--e------
Confidence 899999998744 23589999999999999999999999999763321110 00 0
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
. ........ +.............+.+.++. .++| |||+|.+.....
T Consensus 56 -~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~~ 101 (335)
T cd03802 56 -V--VPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPLP 101 (335)
T ss_pred -c--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccchh
Confidence 0 00000000 000000111122222222222 2699 999998777655
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
+... .++|++++.|+..... ...........+.+++
T Consensus 102 ---~~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 137 (335)
T cd03802 102 ---FARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFVS 137 (335)
T ss_pred ---hhcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEEE
Confidence 2221 5889999999643310 0012334567889999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+...+.+.. . .++.+||||+|.+.|.+.. .+.
T Consensus 138 ~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~~ 171 (335)
T cd03802 138 ISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PKG 171 (335)
T ss_pred ecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CCC
Confidence 99999887653 1 2889999999998876532 134
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHH---CCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~---~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..++|+||+.+.||++.+++++++. +++|+|+|.|.. ...+...... ..+++.+.+..+.+.+..+++.+|+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 6899999999999999999998764 799999999963 2222222222 2467888888888888889999999
Q ss_pred EEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHH
Q 007247 480 ILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (611)
Q Consensus 480 ~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 558 (611)
+++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~--- 309 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D--- 309 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---
Confidence 9999985 99999999999999999999999999999999999987 44 99999999998764 2
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 559 AEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 559 ~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.+.+++...++|||+.++++|+++|+
T Consensus 310 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12344456799999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=310.58 Aligned_cols=380 Identities=23% Similarity=0.277 Sum_probs=263.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
+++++.+...+| ..||++.++.+|+++|+++||+|+|++...+...... ....+|+.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 444444443334 3799999999999999999999999997643221100 011234444
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.+....... +. .......+..+...+...++... .+|| +||+|.+..+..+.
T Consensus 65 ~~~~~~~~~~----------~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~~ 117 (398)
T cd03800 65 VRVPAGPAEY----------LP------KEELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVAL 117 (398)
T ss_pred EecccccccC----------CC------hhhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHHH
Confidence 4443211100 00 00000011123333444333321 1599 99999888877777
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.++.. .++|+|++.|+........ ...... .........++..++.+|.++++|
T Consensus 118 ~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 118 LLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEEcC
Confidence 66655 4899999999643211100 000000 000112234566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+... ++.. ..++.+|+||+|...|.+... ....+++.+.+ .+.++
T Consensus 172 ~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 222 (398)
T cd03800 172 PQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRD--PDKPR 222 (398)
T ss_pred HHHHHHHHHH--cccc------ccccEEECCCCCccceecccc-------------------hhhHHHhhccC--CCCcE
Confidence 9998888752 2222 226899999999988765532 11113344443 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCch----hHHHHHHHHHHCC--CceEEecccChHHHHHHHHH
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~ 476 (611)
|+|+||+.+.||++.+++++.++.+ ++++|+++|++... ....++.+...+. +++.+.+..+.+.+..+++.
T Consensus 223 i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 302 (398)
T cd03800 223 ILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRA 302 (398)
T ss_pred EEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHh
Confidence 9999999999999999999999975 68999999987632 2334455555443 56888888888888899999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
||++++||..|++|++++|||+||+|||+++.+|..|++.++++|+++ +++|+++++++|.+++++ ++
T Consensus 303 adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~ 370 (398)
T cd03800 303 ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PA 370 (398)
T ss_pred CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 999999999999999999999999999999999999999999999987 899999999999999988 77
Q ss_pred HHHHHHHHHH---HhhCCchHHHHHHH
Q 007247 557 ALAEMMKNGM---AQDLSWKGPAKKWE 580 (611)
Q Consensus 557 ~~~~~~~~~~---~~~fsw~~~a~~~~ 580 (611)
.+.++++++. .++|||+.++++|+
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7777777764 48999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=312.68 Aligned_cols=381 Identities=14% Similarity=0.093 Sum_probs=236.4
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCC-CeEEEEeecCCcccc--cCCCceEEEEEeCCeeeEEEEEEee
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCH 158 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (611)
.++|||++++..|.|| .+|+...+..++..|+++| |+|+||+|.++...+ .|... +.+....+.....+.
T Consensus 2 ~~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~----~~f~~~~~~e~~~~~- 74 (462)
T PLN02846 2 QKKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNK----ITFSSPSEQEAYVRQ- 74 (462)
T ss_pred CCCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCcccccccccccc----ccccCchhhhhhhhh-
Confidence 3579999999999998 8999999999999999999 899999998753211 01100 000000000000000
Q ss_pred ecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCc
Q 007247 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238 (611)
Q Consensus 159 ~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~ 238 (611)
..+-.++++....+ ..|...-+.+ .+.......+.+.++.+ +|| |||+|+..
T Consensus 75 ~~~~~v~r~~s~~~----------p~yp~r~~~~-----~r~~~~~~~i~~~l~~~------------~pD-VIHv~tP~ 126 (462)
T PLN02846 75 WLEERISFLPKFSI----------KFYPGKFSTD-----KRSILPVGDISETIPDE------------EAD-IAVLEEPE 126 (462)
T ss_pred hccCeEEEeccccc----------ccCccccccc-----ccccCChHHHHHHHHhc------------CCC-EEEEcCch
Confidence 00111112211110 0011000000 01111123333444433 699 99998733
Q ss_pred -cchH--HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHh-
Q 007247 239 -TSLI--PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI- 314 (611)
Q Consensus 239 -~~~~--~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~- 314 (611)
.+++ +..+... .+. +|.+.|.... ..+ ...+. +... ....+++...+
T Consensus 127 ~LG~~~~g~~~~~k-------~~~-vV~tyHT~y~-~Y~-----~~~~~------------g~~~---~~l~~~~~~~~~ 177 (462)
T PLN02846 127 HLTWYHHGKRWKTK-------FRL-VIGIVHTNYL-EYV-----KREKN------------GRVK---AFLLKYINSWVV 177 (462)
T ss_pred hhhhHHHHHHHHhc-------CCc-EEEEECCChH-HHH-----HHhcc------------chHH---HHHHHHHHHHHH
Confidence 3443 2222221 133 7889996221 100 00000 0000 00111122222
Q ss_pred -hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 315 -LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 315 -~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
..+|.++++|....+ +.. .+...++|+|.+.|.|... ..++.
T Consensus 178 r~~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~ 220 (462)
T PLN02846 178 DIYCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQ 220 (462)
T ss_pred HHhcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhh
Confidence 248999999986655 442 2333458999998876632 11222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (611)
.+ +.+.-.+.++|+|||.++||++.|++|++++.+ ++++|+|+|+|+ ..+.+++++.+++..+..+.++... .
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~--~ 295 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHA--D 295 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCH--H
Confidence 22 211113479999999999999999999999865 689999999998 5677888877766434444444332 2
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.+|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+++ .|.++++++|..++.
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~ 362 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALA 362 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHc
Confidence 599999999999999999999999999999999999998 5999999999964 689999999999998
Q ss_pred hcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+. +..+ ... ..+.|||+..+++++++|+--
T Consensus 363 ~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 363 EE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred cC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 62 2222 222 236999999999999999743
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=310.53 Aligned_cols=387 Identities=16% Similarity=0.126 Sum_probs=233.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
||||+|...+ ..||+|.++.+|++.|.++||+|.++..+........ ..+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~----------------------~~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESV----------------------SHQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccc----------------------ccCCcce
Confidence 8999999753 4699999999999999999999999988733222100 0001111
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHH--HHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF--SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
.....+.+-.. + .....|+ ...+....++.+.+.+ .++|| |||.|..+..++
T Consensus 55 ~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~pD-viHlH~~~~~~~ 108 (405)
T PRK10125 55 VIKHTPRMTAM--------A---------NIALFRLFNRDLFGNFNELYRTITR--------TPGPV-VLHFHVLHSYWL 108 (405)
T ss_pred EEEecccHHHH--------H---------HHHHHHhcchhhcchHHHHHHHHhh--------ccCCC-EEEEecccCcee
Confidence 11111111110 0 0000000 0011111111211111 13799 999998887533
Q ss_pred HHH--HHHhccCCCCCCCceEEEEEecCcc-ccccCcccccccCCCccccccc-cc--ccCCCCCCCC-------cchhH
Q 007247 243 PCY--LKTMYKPKGMYKSAKVVFCIHNIAY-QGRFAFEDFGLLNLPAQFKSSF-DF--IDGYNKPVRG-------RKINW 309 (611)
Q Consensus 243 ~~~--l~~~~~~~~~~~~~k~v~~iH~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~-------~~~~~ 309 (611)
... ++.....+..-+++|+|+|.|+... .|.+.... ....|.... .+ ..+|...... ++...
T Consensus 109 ~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~-----~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~ 183 (405)
T PRK10125 109 NLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTD-----GCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQL 183 (405)
T ss_pred cHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCc-----ccccccccCCCCCCccCCCCCccchHHHHHHHHHHH
Confidence 221 1110000000157899999998753 33333211 011111100 00 1111111011 11222
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
.+.....++.++++|++.++.+.+. ++. .++.+|+||+|+..+.+.... ..
T Consensus 184 ~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~~-------------------~~ 234 (405)
T PRK10125 184 FREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAEL-------------------PP 234 (405)
T ss_pred HHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCcccccccccc-------------------cc
Confidence 2333345689999999999988752 332 289999999997533221110 00
Q ss_pred HHHHhCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-C
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-N 466 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl--~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~ 466 (611)
.+ ..+++++|+++|+. .+.||++.|++|++++. ++++|+|+|+|+... ..++...+.. +
T Consensus 235 ~~------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~g~~~~ 296 (405)
T PRK10125 235 VR------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNHGFETD 296 (405)
T ss_pred cc------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEecCcCC
Confidence 00 11255789999994 36899999999999874 589999999986311 1235554433 4
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
...+..+|+.||++++||.+|+||++++|||+||+|||+|+.||++|++.++ +|+++ +++|+++||+.+
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~~La~~~ 365 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVLQLAQLS 365 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHHHHHhcc
Confidence 4566789999999999999999999999999999999999999999999875 89987 999999999865
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
...+.+..-....+.+++.+.++|||+.++++|+++|+++
T Consensus 366 ~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 366 KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 4333220000011223444578899999999999999864
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=303.00 Aligned_cols=275 Identities=18% Similarity=0.175 Sum_probs=203.7
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
++| |||+|++....++...+ . .++|+|++.|+..... ....
T Consensus 85 ~~D-vv~~h~~~~~~~~~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~ 125 (372)
T cd03792 85 DAD-VVVIHDPQPLALPLFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRV 125 (372)
T ss_pred CCC-EEEECCCCchhHHHhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHH
Confidence 699 99999887543332222 1 3789999999532100 0122
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCC-cCCCCccccccccCcchhhhccHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPL 385 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 385 (611)
+.+++..+..+|.+++.|..+.. .++.. .++ +||||+|... +... ++ +.
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~--------~~--------~~ 175 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE--------LS--------PA 175 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhcC-------CCCCC------ceE-EeCCCCCCCccccCC--------CC--------HH
Confidence 34567778899999998843321 22221 144 9999999642 1111 10 12
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc---hhHHHHHHHHHH--CCCc
Q 007247 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEK 458 (611)
Q Consensus 386 ~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~ 458 (611)
....+++++|++. +.++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+. +..+.++++... ..++
T Consensus 176 ~~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 176 DIEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCC
Confidence 2445677888764 56899999999999999999999998865 6899999999863 233344444422 3345
Q ss_pred eEEeccc--ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 459 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 459 v~~~~~~--~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+.+.+.. +.+.+..+++.||++++||.+|+||++++|||+||+|||+|+.||..+++.++.+|+++ +
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~- 322 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D- 322 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C-
Confidence 6666554 66778889999999999999999999999999999999999999999999999999975 3
Q ss_pred cCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 537 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
+.++++.+|.+++.+ ++.+.+|++++ +.++|||+.++++|+++|+.+
T Consensus 323 -~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 567889999999987 66677777666 357999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=310.14 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=181.7
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+.+..++.+|.|+++|+...+.+.+. ++.. ....+.+|+||+|.+.+.+.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c
Confidence 34556788999999999999988752 2211 11234689999999888664321 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-----CCcEEEEEeCCCc------hhHHHHHHHHHH-C-
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 455 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 455 (611)
.......+ ++.++|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. .+.+.++++..+ +
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11112222 355899999999999999999999999865 4899999999863 244667777665 3
Q ss_pred -CCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccC
Q 007247 456 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534 (611)
Q Consensus 456 -~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 534 (611)
.+++.+.+..+.+.+..+++.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357888888888888899999999999999999999999999999999999999999999999999986
Q ss_pred CccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHH
Q 007247 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 579 (611)
Q Consensus 535 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~ 579 (611)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 55 899999999999998 55666666665 46899999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=316.70 Aligned_cols=473 Identities=19% Similarity=0.245 Sum_probs=349.6
Q ss_pred eEEEEeeeec-----CccccccHHHHhccchHHHHhCCCeEEEEeecCCccc---------------ccC-------CC-
Q 007247 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK---------------DAW-------DT- 137 (611)
Q Consensus 86 kIl~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~---------------~~~-------~~- 137 (611)
-+++++.||. |. ..||+|...+...++++..|...+-++..|.+.- +.| +.
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 3558888875 53 6799999999999999999999999988764210 112 11
Q ss_pred ------ceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCc-cccCCCCCCCCcchHHH---HHHHHHHH
Q 007247 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAA 207 (611)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~-~iy~~~~~~~~~~~~~r---~~~~~~~~ 207 (611)
...+.+++.+....++.+.....+|+.+++|++......+.+... .+|++ ++..| +.+|+.+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGG 238 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHH
Confidence 235566777777788888888889999999988743222333322 46763 45667 58999999
Q ss_pred HHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-----HHHHh-ccCCC--CCCCceEEEEEecCcccc--ccCcc
Q 007247 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFE 277 (611)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~-----~l~~~-~~~~~--~~~~~k~v~~iH~~~~~~--~~~~~ 277 (611)
+++++.+.+ +|| |||+||||++++++ +++.. +.... -..+.++|||+|+..++| +|+.+
T Consensus 239 l~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 239 VRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 999988764 599 99999999999998 44321 10000 012578999999999999 99987
Q ss_pred cccc--------cCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHH---HHHHHcCcCCCcccchhhh
Q 007247 278 DFGL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 346 (611)
Q Consensus 278 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~ 346 (611)
.+.. ++++...+........-. ....+++++.++..|+.+.+||+-+ .+++......|.++ +
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~----~ 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV----E 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc----c
Confidence 7733 566654433222211100 0134799999999999999999988 44443321223332 2
Q ss_pred ccceeEeeCCcccCCcC-CCCccccccccC---------------------cchhhhccHHHHHHHHHHh----------
Q 007247 347 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 394 (611)
Q Consensus 347 ~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~---------- 394 (611)
..++..|.||||...|. |..++.+ .+|. ...+...|..+|.++.+.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34799999999999998 7666655 3331 1233456777777766654
Q ss_pred -----------CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC------chhHHHHHHH
Q 007247 395 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 451 (611)
Q Consensus 395 -----------gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 451 (611)
+.+.+++.++|+|++|+.++||.+++++.+.++.+ .++|||++|++. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55667888999999999999999999999888744 479999999987 4566788888
Q ss_pred HH--HCCCceEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccc
Q 007247 452 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 527 (611)
Q Consensus 452 ~~--~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~ 527 (611)
.. .+++++.++..|+..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.. ++.|||.+|.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 87 67789999999999999999999999999999 899999999999999999999999999987 78999999742
Q ss_pred c--cccccCCccCHHHHHHHHHHHHH-hc-C------HHHHHHHHHHHHHh---hCCchHHHHHHHH-HHHHH
Q 007247 528 S--VDCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEE-TLLNL 586 (611)
Q Consensus 528 ~--~~~~~v~~~d~~~la~~i~~ll~-~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~-~~~~l 586 (611)
. .+.+.-+..|.++|-++|++.+- -+ + +..+.+|.+++|.+ .|||+.++++|.+ +|.-+
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~ 691 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPA 691 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence 1 11222244677788888866544 22 1 46799999999987 9999999999965 44443
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=291.35 Aligned_cols=368 Identities=20% Similarity=0.259 Sum_probs=269.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
++|+.|+.+|+|. .||++..++.|++.|.+.||.|.++|-.|++... +| ..-+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------ir---ylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------IR---YLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------ee---eecCCceE
Confidence 5799999999996 9999999999999999999999999998865322 22 22356888
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
|+++....+.. .|--.+|+ .+.++.... ++. +.. |||.|...+.+.--
T Consensus 58 yylp~~v~~n~---tT~ptv~~------------~~Pllr~i~---lrE-------------~I~-ivhghs~fS~lahe 105 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFS------------DFPLLRPIL---LRE-------------RIE-IVHGHSPFSYLAHE 105 (426)
T ss_pred EEEeeeeeecc---cchhhhhc------------cCcccchhh---hhh-------------ceE-EEecCChHHHHHHH
Confidence 87754433321 01111121 111111111 111 356 89998755555433
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+.... ..|.++|||-|. .|.+.++.....+ +.+...+...|++||+|
T Consensus 106 ~l~har-----tMGlktVfTdHS-----lfGfad~~si~~n----------------------~ll~~sL~~id~~IcVs 153 (426)
T KOG1111|consen 106 ALMHAR-----TMGLKTVFTDHS-----LFGFADIGSILTN----------------------KLLPLSLANIDRIICVS 153 (426)
T ss_pred HHHHHH-----hcCceEEEeccc-----cccccchhhhhhc----------------------ceeeeeecCCCcEEEEe
Confidence 333221 158999999995 3443333221111 23445677899999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
...++...- + ..+.+.++.+|||.++...|.|.+.. . ...+..+
T Consensus 154 htskentvl---r-----~~L~p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~~ 197 (426)
T KOG1111|consen 154 HTSKENTVL---R-----GALAPAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADIIT 197 (426)
T ss_pred ecCCCceEE---E-----eccCHhHeeeccceeeccccccCccc---------------------------c-CCCCeeE
Confidence 987765442 1 12334599999999999999985321 0 2234478
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc--hhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
|+.++||..+||+|.|+++++++.+ ++++|+|+|+|++ .+++.++++..+ +++...+..+.+.+.+.|.+-|+|
T Consensus 198 ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~v~h~~Vr~vl~~G~IF 275 (426)
T KOG1111|consen 198 IVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGTVPHDRVRDVLVRGDIF 275 (426)
T ss_pred EEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhcc--CceEEecccchHHHHHHHhcCcEE
Confidence 9999999999999999999999987 8999999999994 577777777655 569999999999999999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
+.||..|+|+++++|||+||+|||+++.||++|++.++ .-++ ...++++++++++.++...... -+
T Consensus 276 lntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~-----------~~~~~~dl~~~v~~ai~~~~~~--p~ 341 (426)
T KOG1111|consen 276 LNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITL-----------GEPGPDDLVGAVEKAITKLRTL--PL 341 (426)
T ss_pred eccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceec-----------cCCChHHHHHHHHHHHHHhccC--ch
Confidence 99999999999999999999999999999999999876 2222 6678899999999998864321 12
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007247 561 MMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 591 (611)
Q Consensus 561 ~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~~ 591 (611)
-..+.+.+.|+|+.++++.+++|.++....+
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 2345567889999999999999999987654
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=301.31 Aligned_cols=349 Identities=15% Similarity=0.165 Sum_probs=239.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhC--CCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
|||++++..++. .||++.++..|+++|.++ ||+|.++++....... |. ....+. .....+
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~-------------~~~~~~-~~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WL-------------KEIKYA-QSFSNI 62 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HH-------------Hhcchh-cccccc
Confidence 899999875433 599999999999999999 8999999976331111 10 000000 000000
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
... +.... .....+.+.++. .+|| +||+|+....+.
T Consensus 63 ~~~---------------------------~~~~~----~~~~~l~~~l~~------------~~~D-ii~~~~~~~~~~ 98 (359)
T PRK09922 63 KLS---------------------------FLRRA----KHVYNFSKWLKE------------TQPD-IVICIDVISCLY 98 (359)
T ss_pred hhh---------------------------hhccc----HHHHHHHHHHHh------------cCCC-EEEEcCHHHHHH
Confidence 000 00000 011122223332 2699 999997655454
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
...++.... ...+++.+.|.... ... ...+ ..+..+|.+++
T Consensus 99 ~~~~~~~~~-----~~~~~~~~~h~~~~---------------~~~-----------------~~~~--~~~~~~d~~i~ 139 (359)
T PRK09922 99 ANKARKKSG-----KQFKIFSWPHFSLD---------------HKK-----------------HAEC--KKITCADYHLA 139 (359)
T ss_pred HHHHHHHhC-----CCCeEEEEecCccc---------------ccc-----------------hhhh--hhhhcCCEEEE
Confidence 444444321 23456666673211 000 0001 12368999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+..++.+.. +|++.+ ++.+|+||+|.+.+..... ...+.
T Consensus 140 ~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~------------------------------~~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP------------------------------ERDKP 180 (359)
T ss_pred cCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc------------------------------ccCCC
Confidence 99999999885 455543 8999999999654421110 11245
Q ss_pred cEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccCh--HHHHHHHHH
Q 007247 403 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNI--PLAHMIIAG 476 (611)
Q Consensus 403 ~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~--~~~~~i~~~ 476 (611)
++++++||+. ++||++.+++++.++. ++++|+|+|+|+ ..+.++++..++ ++++.+.+..+. +.+..+++.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 7899999996 4699999999999885 489999999997 355667766654 356777765533 667788999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~ 555 (611)
||++++||.+|+||++++|||+||+|||+++ .||..|+|.++.+|+++ +++|+++++++|.++++++
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~-- 325 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGE-- 325 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCc--
Confidence 9999999999999999999999999999999 89999999999999987 9999999999999999984
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 556 QALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 556 ~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+.+..........+|+-+...+++.++|..+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 326 VKYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 321112222235788889999999999988753
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=292.80 Aligned_cols=356 Identities=18% Similarity=0.187 Sum_probs=240.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.+++|. ..||++.++.+|+++|.++||+|+|+++....... .....|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 799998775553 58999999999999999999999999976322110 1112466665
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.... ...+...........+ . ++| ++|+|.+.....+..
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~--~-----------~~~-~~~i~~~~~~~~~~~ 101 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF--V-----------KRD-IDHVHALGPAIAPFL 101 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh--c-----------cCC-eEEEEecCccHHHHH
Confidence 543221000 0000001111111111 1 244 444443333222222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh-HhHHHhhhccEEEecC
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLTVS 324 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi~vS 324 (611)
..... .+.|+++++|+..+... .+.. + ..+... ..+..+..+|.++++|
T Consensus 102 ~~~~~------~~~~~v~~~h~~~~~~~---------~~~~--------------~-~~~~~~~~~~~~~~~ad~ii~~s 151 (363)
T cd04955 102 PLLRL------KGKKVVVNMDGLEWKRA---------KWGR--------------P-AKRYLKFGEKLAVKFADRLIADS 151 (363)
T ss_pred HHHHh------cCCCEEEEccCcceeec---------cccc--------------c-hhHHHHHHHHHHHhhccEEEeCC
Confidence 11111 37899999996533110 0000 0 001122 2355678999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..++.+... +|.. . .+|+||+|...+.+. ....++.+++ +.+.
T Consensus 152 ~~~~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~ 195 (363)
T cd04955 152 PGIKEYLKEK--YGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRY 195 (363)
T ss_pred HHHHHHHHHh--cCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcE
Confidence 9999998642 4432 3 889999998765431 1233444544 2346
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
++|+||+.+.||++.+++|++++.. +++|+|+|+|+ ..+.+.+++. ....+++.+.+..+.+....++..||++++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 273 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFYL 273 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEEe
Confidence 8899999999999999999999865 89999999985 2344444431 223457888888888888889999999999
Q ss_pred CCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 483 PSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 483 pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
||.. |+||++++|||+||+|||+|+.|+..|++++ +|+++ +++|. ++++|.+++++ ++.+.++
T Consensus 274 ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~~ 337 (363)
T cd04955 274 HGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSAM 337 (363)
T ss_pred CCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHHH
Confidence 9999 9999999999999999999999999999976 67776 66665 99999999998 5666666
Q ss_pred HHHH---HHhhCCchHHHHHHHHHHH
Q 007247 562 MKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
++++ ..++|||+.++++|+++|+
T Consensus 338 ~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 338 AKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6655 3567999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=291.33 Aligned_cols=360 Identities=23% Similarity=0.266 Sum_probs=252.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..|+|. .||.+..+..|+++|+++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 5999999999999999999999999987432111100 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~ 244 (611)
....+.+ .. .. +. ... .......++. .+|| +||+|.... .....
T Consensus 56 ~~~~~~~-~~------~~---------~~--~~~----~~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~~ 100 (364)
T cd03814 56 SVPLPGY-PE------IR---------LA--LPP----RRRVRRLLDA------------FAPD-VVHIATPGPLGLAAL 100 (364)
T ss_pred ccccCcc-cc------eE---------ec--ccc----hhhHHHHHHh------------cCCC-EEEEeccchhhHHHH
Confidence 0000000 00 00 00 000 0111111222 2699 888875433 22233
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+... .++|+++++|+...+-. ... ... ..........+..+..+|.++++|
T Consensus 101 ~~~~~-------~~~~~i~~~~~~~~~~~------~~~-~~~--------------~~~~~~~~~~~~~~~~~d~i~~~s 152 (364)
T cd03814 101 RAARR-------LGIPVVTSYHTDFPEYL------RYY-GLG--------------PLSWLAWAYLRWFHNRADRVLVPS 152 (364)
T ss_pred HHHHH-------cCCCEEEEEecChHHHh------hhc-ccc--------------hHhHhhHHHHHHHHHhCCEEEeCC
Confidence 33322 48999999996432100 000 000 000011345566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+.. .+.. ++.+++||+|...+.+... ....+.+++ ..+.++
T Consensus 153 ~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~~ 199 (364)
T cd03814 153 PSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG---PPDRPV 199 (364)
T ss_pred HHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC---CCCCeE
Confidence 999986654 2222 7889999999988866532 122333444 134578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
|+|+|++.+.||++.++++++++.+ ++++|+|+|.|+. ...++ ...+++.+.+..+.+.+..+++.||++++|
T Consensus 200 i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~ 273 (364)
T cd03814 200 LLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFP 273 (364)
T ss_pred EEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 9999999999999999999999976 5899999999873 33333 344568888877888888999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 563 (611)
|..|+||++++|||+||+|||+++.++..|++.++++|+++ ++.|.++++++|.+++++ ++.+.++++
T Consensus 274 s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~ 341 (364)
T cd03814 274 SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMAA 341 (364)
T ss_pred cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 99999999999999999999999999999999999999987 999999999999999998 777777777
Q ss_pred HHH--HhhCCchHHHHHHHHHHH
Q 007247 564 NGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 564 ~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++. .++|+|+.++++++++|+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 342 RARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHhhcCHHHHHHHHHHhhC
Confidence 764 368999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=291.42 Aligned_cols=351 Identities=19% Similarity=0.232 Sum_probs=246.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++.. + ..||.+.++..++.+|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 3699999999999999999999999986511
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
.+.. .++. .++| |||+|.+.......
T Consensus 42 ------~~~~-----------------------------------~~~~------------~~~d-iih~~~~~~~~~~~ 67 (365)
T cd03825 42 ------ALIS-----------------------------------KIEI------------INAD-IVHLHWIHGGFLSI 67 (365)
T ss_pred ------hhhh-----------------------------------Chhc------------ccCC-EEEEEccccCccCH
Confidence 0000 0000 2699 89999866654443
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCccccc-c--cccccCCCC-CCCCcchhHhHHHh-hhccE
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS-S--FDFIDGYNK-PVRGRKINWMKAGI-LESDM 319 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~~~~~~~~k~~~-~~ad~ 319 (611)
.+..... .++|+|+++|+..+...-.. + ......+.. . ..+...+.. ......+.+.+..+ ..++.
T Consensus 68 ~~~~~~~-----~~~~~v~~~hd~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 68 EDLSKLL-----DRKPVVWTLHDMWPFTGGCH--Y--PGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHH-----cCCCEEEEcccCcccccccC--C--ccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 3332220 38899999997643211000 0 000000000 0 000000000 00001112222223 45788
Q ss_pred EEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 320 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++++|++..+.+.+. +.++ ..++.+|+||+|.+.|.|.. +...++.++++.
T Consensus 139 ~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~- 189 (365)
T cd03825 139 IVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPA- 189 (365)
T ss_pred EEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCC-
Confidence 999999999888752 2222 23899999999998886543 345566777764
Q ss_pred CCCcEEEEEcCccc--ccCHHHHHHHHHhccc---CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC-hHHHHHH
Q 007247 400 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 473 (611)
Q Consensus 400 ~~~~~il~iGrl~~--~Kg~d~li~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~i 473 (611)
+.+++++.|+... .||++.++++++.+.+ ++++++++|.++..... ....++.+.+..+ .+.+..+
T Consensus 190 -~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 190 -DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred -CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 3466777777665 8999999999999975 68999999998742211 2334577777777 6778889
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
++.||++++||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~- 330 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD- 330 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999987 889999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 554 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
++.+.++++++ ..++|||+.++++|+++|+++
T Consensus 331 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 -PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55556665554 468899999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=292.62 Aligned_cols=272 Identities=22% Similarity=0.276 Sum_probs=212.3
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+|| +||+|....++....+.+. .++|++++.|+......... ... . . ....
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---------~~~-~----------~-~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---------LLR-S----------R-WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---------hcc-c----------c-hhHH
Confidence 699 9999976555555444443 48999999996432110000 000 0 0 0011
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
....+..++.+|.++++|+..++.+.. +|.+.+ ++.+++||+|.+.+.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234456678999999999999999886 455433 7999999999887765321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEe
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGV 462 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~ 462 (611)
..+.++++|+|++.+.||++.+++|++++.+ ++++|+|+|.|+ +.+.++++... ..+++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1245689999999999999999999999875 689999999886 55667777766 34678888
Q ss_pred cccChHHHHHHHHHccEEEeCCC------CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 463 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+..+.+.+..+++.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 88888888899999999999997 499999999999999999999999999999999999987 89
Q ss_pred cCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 537 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999997 66666666655 4689999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=288.62 Aligned_cols=357 Identities=20% Similarity=0.212 Sum_probs=253.6
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... . ....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~----------------~-----~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE----------------E-----LEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH----------------H-----HHhcCCeEE
Confidence 68999987644 9999999999999999999999998652211100 0 001244544
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.... .. .....+.++++.. +|| +||+|.+........
T Consensus 56 ~~~~~~~~~---------------------~~----~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~~ 97 (365)
T cd03807 56 CLGKRPGRP---------------------DP----GALLRLYKLIRRL------------RPD-VVHTWMYHADLYGGL 97 (365)
T ss_pred EEecccccc---------------------cH----HHHHHHHHHHHhh------------CCC-EEEeccccccHHHHH
Confidence 443221100 00 1112222333322 699 899988776665555
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... .+.+++++.|+...... .+. ........+.....+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~-------------~~~-------------~~~~~~~~~~~~~~~~~~i~~s~ 145 (365)
T cd03807 98 AARLA------GVPPVIWGIRHSDLDLG-------------KKS-------------TRLVARLRRLLSSFIPLIVANSA 145 (365)
T ss_pred HHHhc------CCCcEEEEecCCccccc-------------chh-------------HhHHHHHHHHhccccCeEEeccH
Confidence 55432 47899999996543210 000 00112233445567899999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.. ++.+.+ ++.+++||+|...+.+.... ...++++++++. +.++|
T Consensus 146 ~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~i 196 (365)
T cd03807 146 AAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFLI 196 (365)
T ss_pred HHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeEE
Confidence 99999885 344433 88999999998877654321 344566778763 55789
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHH-H--CCCceEEecccChHHHHHHHHHccEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~--~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+++|++.+.||++.+++++.++.+ ++++|+|+|.+.. ...++.... . ..+++.+.+. .+.+..+++.||++
T Consensus 197 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 272 (365)
T cd03807 197 GIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDVF 272 (365)
T ss_pred EEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCEE
Confidence 999999999999999999999876 6899999999873 222333322 2 2344555543 23466899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ +++|+++++++|..++++ ++.+.+
T Consensus 273 v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 338 (365)
T cd03807 273 VLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQA 338 (365)
T ss_pred EeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHHH
Confidence 9999999999999999999999999999999999987 78887 889999999999999998 566666
Q ss_pred HHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 561 MMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 561 ~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
+++++ ..++|||+.++++|+++|+
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 339 LGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 66555 4688999999999999984
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=288.74 Aligned_cols=353 Identities=19% Similarity=0.246 Sum_probs=248.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+++++.+ ..||.+.++.+|+++|.++||+|++++........... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888653 46999999999999999999999999865221111000 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+... . ....+......+.++++.. +|| |||+|..++.++...
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~------------~pd-iv~~~~~~~~~~~~l 96 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQF------------KPD-VVHAHMFHANIFARL 96 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHhc------------CCC-EEEEcccchHHHHHH
Confidence 11000 0 0001111112222333332 699 999998877666666
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
++... .+.+++++.|+....+.. .....+.....++.++++|+
T Consensus 97 ~~~~~------~~~~~v~~~h~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 97 LRLFL------PSPPLICTAHSKNEGGRL-------------------------------RMLAYRLTDFLSDLTTNVSK 139 (360)
T ss_pred HHhhC------CCCcEEEEeeccCchhHH-------------------------------HHHHHHHHhhccCceEEEcH
Confidence 65542 578999999964321110 01122333446788999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+... .+.+ ..++.+||||+|...+.+... ....++++++++. +.+++
T Consensus 140 ~~~~~~~~~--~~~~------~~~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~~ 191 (360)
T cd04951 140 EALDYFIAS--KAFN------ANKSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFVI 191 (360)
T ss_pred HHHHHHHhc--cCCC------cccEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEEE
Confidence 999988752 2222 238999999999887765421 2445677777753 55899
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+++||+.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.+++....++ +++.+.+.. +.+..+++.||+++
T Consensus 192 l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v 267 (360)
T cd04951 192 LAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFV 267 (360)
T ss_pred EEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEE
Confidence 999999999999999999999876 589999999987 3455555555443 457666543 34567999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||..|++|++++|||++|+|||+++.|+..|++.+ +|+++ +++|+++++++|.+++++. +.....+
T Consensus 268 ~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~~ 334 (360)
T cd04951 268 LSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDII 334 (360)
T ss_pred ecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 999999999999999999999999999999999987 67776 8999999999999999652 3333333
Q ss_pred HH--HHHHhhCCchHHHHHHHHHHH
Q 007247 562 MK--NGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~--~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.. +.+.++|||+.++++|+++|+
T Consensus 335 ~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 335 GARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 33 346799999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=286.82 Aligned_cols=357 Identities=18% Similarity=0.208 Sum_probs=245.3
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..++|. ..||.+.++..|+++|+++||+|+++++............ ....... ...
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------~~~~~~~-----~~~ 62 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI------------GVVVYGR-----PID 62 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc------------cceeecc-----ccc
Confidence 799999988774 6799999999999999999999999998743222110000 0000000 000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.......... . +.........+...+.+.++.. +|| +||+|.+........
T Consensus 63 ~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 113 (359)
T cd03823 63 EVLRSALPRD--------L--------FHLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSIL 113 (359)
T ss_pred cccCCCchhh--------h--------hHHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHHH
Confidence 0000000000 0 0000000011222333333332 699 899987643322222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... .++|+++++|+...... .........|.++++|+
T Consensus 114 ~~~~~------~~~~~i~~~hd~~~~~~-----------------------------------~~~~~~~~~d~ii~~s~ 152 (359)
T cd03823 114 RAARD------RGIPIVLTLHDYWLICP-----------------------------------RQGLFKKGGDAVIAPSR 152 (359)
T ss_pred HHHHh------cCCCEEEEEeeeeeecc-----------------------------------hhhhhccCCCEEEEeCH
Confidence 11111 47899999996432110 00001112399999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.. ++.. ..++.+|+||+|...+.+... +. ..+.++|
T Consensus 153 ~~~~~~~~---~~~~------~~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~i 194 (359)
T cd03823 153 FLLDRYVA---NGLF------AEKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLRF 194 (359)
T ss_pred HHHHHHHH---cCCC------ccceEEecCCcChhhcccccc---------------------------CC--CCCceEE
Confidence 99999886 3322 238999999999887754321 11 1355789
Q ss_pred EEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCC
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 485 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~ 485 (611)
+|+|++.+.||++.++++++++.+++++|+++|.+.......... ....++.+.+..+.+.+..+++.||++++||.
T Consensus 195 ~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 195 GFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred EEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 999999999999999999999976799999999987433222221 34456888888888888899999999999998
Q ss_pred -CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 007247 486 -FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 564 (611)
Q Consensus 486 -~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 564 (611)
.|++|++++|||+||+|||+++.++..|++.++.+|+++ +++|+++++++|.+++++ +..+.+++++
T Consensus 272 ~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~~ 339 (359)
T cd03823 272 WPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRAG 339 (359)
T ss_pred ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHh
Confidence 699999999999999999999999999999999999987 999999999999999997 7777777777
Q ss_pred HHHhhCCchHHHHHHHHHHH
Q 007247 565 GMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 565 ~~~~~fsw~~~a~~~~~~~~ 584 (611)
+.. .++.+.++++|+++|+
T Consensus 340 ~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 340 IEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred HHH-hhhHHHHHHHHHHHhh
Confidence 643 3445999999999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=288.62 Aligned_cols=268 Identities=23% Similarity=0.283 Sum_probs=204.3
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+|| +||+|.....+...++... .++|+++++|+.....
T Consensus 78 ~~d-ii~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~---------------------------------- 115 (355)
T cd03819 78 KVD-IVHARSRAPAWSAYLAARR-------TRPPFVTTVHGFYSVN---------------------------------- 115 (355)
T ss_pred CCC-EEEECCCchhHHHHHHHHh-------cCCCEEEEeCCchhhH----------------------------------
Confidence 699 8999987665555544433 4899999999543200
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
.+.+..+..+|.++++|+...+.+.. .++.+.+ ++.+|+||+|...|.+.... ...
T Consensus 116 -~~~~~~~~~~~~vi~~s~~~~~~~~~--~~~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~ 171 (355)
T cd03819 116 -FRYNAIMARGDRVIAVSNFIADHIRE--NYGVDPD------RIRVIPRGVDLDRFDPGAVP---------------PER 171 (355)
T ss_pred -HHHHHHHHhcCEEEEeCHHHHHHHHH--hcCCChh------hEEEecCCccccccCccccc---------------hHH
Confidence 13445577899999999999999874 2555433 89999999999887654221 111
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc--hhHHHHHHHHHHCC--CceE
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKAR 460 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~v~ 460 (611)
...++++++++ ++.++++|+||+.+.||++.+++++.++.+ ++++|+|+|.++. .+.+.+.+...++. +++.
T Consensus 172 ~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (355)
T cd03819 172 ILALAREWPLP--KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVT 249 (355)
T ss_pred HHHHHHHcCCC--CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEE
Confidence 22356677665 355899999999999999999999999977 6899999999863 34455555555433 4566
Q ss_pred EecccChHHHHHHHHHccEEEeCC-CCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCH
Q 007247 461 GVAKFNIPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539 (611)
Q Consensus 461 ~~~~~~~~~~~~i~~~aDv~l~pS-~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~ 539 (611)
+.+. .+.+..+++.||++++|| ..|++|++++|||+||+|||+++.||..|++.++.+|+++ +++|+
T Consensus 250 ~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~ 317 (355)
T cd03819 250 FVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDA 317 (355)
T ss_pred EcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCH
Confidence 6655 445668999999999999 7899999999999999999999999999999999999987 99999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHH
Q 007247 540 AAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGP 575 (611)
Q Consensus 540 ~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~ 575 (611)
++++++|..++.. +++.+.++++++ +.++|||+.+
T Consensus 318 ~~l~~~i~~~~~~-~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 318 EALAQALDQILSL-LPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred HHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999766653 155555555554 5799999863
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=285.29 Aligned_cols=349 Identities=20% Similarity=0.251 Sum_probs=243.7
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.+|+|. .||.+.++..|+++|.++||+|++++.......... ...+..++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999998885 899999999999999999999999997633211100 00111222
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+.. +.. ++. .... .......+ +. ..++| +||+|..........
T Consensus 57 ~~~~--~~~---------~~~-------~~~~-------~~~~~~~~-~~---------~~~~D-ii~~~~~~~~~~~~~ 100 (357)
T cd03795 57 RAPS--LLN---------VAS-------TPFS-------PSFFKQLK-KL---------AKKAD-VIHLHFPNPLADLAL 100 (357)
T ss_pred Eeec--ccc---------ccc-------cccc-------HHHHHHHH-hc---------CCCCC-EEEEecCcchHHHHH
Confidence 1111 000 000 0000 00000011 11 12699 899886443222222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
.... .+.|+++++|+...... . .......+++..+..+|.++++|+
T Consensus 101 ~~~~-------~~~~~i~~~h~~~~~~~--------------~-------------~~~~~~~~~~~~~~~~d~vi~~s~ 146 (357)
T cd03795 101 LLLP-------RKKPVVVHWHSDIVKQK--------------L-------------LLKLYRPLQRRFLRRADAIVATSP 146 (357)
T ss_pred HHhc-------cCceEEEEEcChhhccc--------------h-------------hhhhhhHHHHHHHHhcCEEEeCcH
Confidence 2111 37899999995322110 0 000112345667889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
.+.+.+.....+. .++.+||||+|...+.+.... .. .....+ .+.++|
T Consensus 147 ~~~~~~~~~~~~~---------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~i 194 (357)
T cd03795 147 NYAETSPVLRRFR---------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPFF 194 (357)
T ss_pred HHHHHHHHhcCCc---------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcEE
Confidence 9999776421111 278999999999887654210 00 111222 355799
Q ss_pred EEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEEeC
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
+|+||+.+.||++.+++|++++. +++|+|+|+|+ ....++++..+. ..++.+.+..+.+.+..+++.||++++|
T Consensus 195 ~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 195 LFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred EEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeC
Confidence 99999999999999999999996 89999999987 455666665433 3578888888888888999999999999
Q ss_pred CC--CCCCcHHHHHHHHcCCceEEcCCcccccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 484 SR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 484 S~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
|. .|+||++++|||+||+|||+++.++..+.+.+ +++|+++ +++|+++++++|..++++ ++.+.+
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~~ 338 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRER 338 (357)
T ss_pred CcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHHH
Confidence 96 49999999999999999999999999998886 8999987 899999999999999998 666666
Q ss_pred HHHHH---HHhhCCchHHH
Q 007247 561 MMKNG---MAQDLSWKGPA 576 (611)
Q Consensus 561 ~~~~~---~~~~fsw~~~a 576 (611)
|++++ +.+.|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 66665 46899999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=303.44 Aligned_cols=283 Identities=14% Similarity=0.135 Sum_probs=200.8
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEE-EEecCccccccCcccccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~-~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
+|| |||+|.....++....... .++|+|+ +.|+..... . +..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~~~-~----------~~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPPVD-R----------PDRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcccc-c----------hhHH---------------HH
Confidence 699 9999987776666665554 3678776 556432100 0 0000 00
Q ss_pred chhHhHHHhh--hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 306 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 306 ~~~~~k~~~~--~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.+......+. .++.++++|...++.+.. .+|++.+ ++.+||||+|...|.+.+.
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~---------------- 501 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDA---------------- 501 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCch----------------
Confidence 0111111222 345777778888777764 2455544 8999999999887764321
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--Cce
Q 007247 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 459 (611)
Q Consensus 384 ~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v 459 (611)
....+..+.....++.++|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++
T Consensus 502 ---~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 502 ---CTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 0111111111112345789999999999999999999998865 789999999987 5667777777654 556
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccC-
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 538 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d- 538 (611)
.+.+. .. .+..+|+.+|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|+++ +++|
T Consensus 577 ~flG~-~~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTGL-SR-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcCC-cc-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 66554 33 45679999999999999999999999999999999999999999999999999987 7766
Q ss_pred -HHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 539 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 539 -~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.++++++|.+++.+.. .+.+.+.+++...++|||+.++++|+++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887532 233444444445689999999999999995
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=286.38 Aligned_cols=366 Identities=22% Similarity=0.244 Sum_probs=246.9
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|++.++| ..||.+.++.+|+++|+++||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 79999998876 4899999999999999999999999997643222110000 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCC-ccchHH-
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIP- 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~-~~~~~~- 243 (611)
..... ... ......+ .+............ .++| +||+|+. ......
T Consensus 57 ~~~~~--~~~------------------~~~~~~~-~~~~~~~~~~~~~~----------~~~d-ii~~~~~~~~~~~~~ 104 (375)
T cd03821 57 LFSIN--VAY------------------GLNLARY-LFPPSLLAWLRLNI----------READ-IVHVHGLWSYPSLAA 104 (375)
T ss_pred ecccc--hhh------------------hhhhhhh-ccChhHHHHHHHhC----------CCCC-EEEEecccchHHHHH
Confidence 00000 000 0000000 00001111111111 2589 8999873 322222
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..+... .+.|++++.|+........ ...+.. . .......+..+..++.++++
T Consensus 105 ~~~~~~-------~~~~~i~~~~~~~~~~~~~---------~~~~~~----------~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 105 ARAARK-------YGIPYVVSPHGMLDPWALP---------HKALKK----------R--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHH-------hCCCEEEEccccccccccc---------cchhhh----------H--HHHHHHHHHHHhcCCEEEEC
Confidence 222222 4889999999643211100 000000 0 00112234566789999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|.......... . ...++.+||||+|...+.+... ... ++..+.+ .+.+
T Consensus 157 s~~~~~~~~~~----~------~~~~~~vi~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~ 204 (375)
T cd03821 157 SEQEAAEIRRL----G------LKAPIAVIPNGVDIPPFAALPS-------------------RGR-RRKFPIL--PDKR 204 (375)
T ss_pred CHHHHHHHHhh----C------CcccEEEcCCCcChhccCcchh-------------------hhh-hhhccCC--CCCc
Confidence 98877766531 1 1237999999999988765431 111 4444443 3568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+...+...++.+..++ .+++.+.+..+.+.+..+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999987 69999999998766666666654433 356888888887888889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||..|+||++++|||+||+|||+++.||..|++.+ .+|++. +.+.++++++|.+++++ +..+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788874 45669999999999998 55555
Q ss_pred HHHHHH---HHhhCCchHHHHHHHH
Q 007247 560 EMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 560 ~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 565554 4799999999998863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-32 Score=283.78 Aligned_cols=382 Identities=20% Similarity=0.208 Sum_probs=257.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999988775 499999999999999999999999997633222110000 011123455555
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-ch-HH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SL-IP 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~-~~ 243 (611)
.+........ . +.....++..+.......... .. .+|| +||+|.+.. .. ..
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~---------~~~D-~v~~~~~~~~~~~~~ 116 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RR---------RRPD-VIIATSPPLLIALAA 116 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-cc---------cCCC-EEEEcCChHHHHHHH
Confidence 4432211110 0 111112222222222222221 11 2699 888886322 22 22
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..++.. .++|+++++|+..+....... ..... .........+++..+..+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 117 LLLARL-------KGAPFVLEVRDLWPESAVALG-----LLKNG------------SLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHh-------cCCCEEEEehhhcchhHHHcc-----Ccccc------------chHHHHHHHHHHHHHhcCCEEEEE
Confidence 223322 488999999975432111000 00000 000011223456678899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+..++.+.. ++.. ..++.+|+||+|...+.+.... .. +..... ..+.+
T Consensus 173 s~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVP------PEKISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCC------cCceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCcE
Confidence 9999998873 3333 2389999999998877654321 01 222222 23567
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHH-CCCceEEecccChHHHHHHHHHccEEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|+|++.++||++.+++++.++.+ ++++|+|+|.|+ ..+.++++... ...++.+.+..+.+.+..+++.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 99999999999999999999999976 489999999987 34444443322 235688888778888889999999999
Q ss_pred eCCCCCCC-----cHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 482 IPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 482 ~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
+||..|++ |++++|||+||+|||+++.++..+.+.++.+|+++ +++|+++++++|.+++.+ ++
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~ 367 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PE 367 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99998875 88899999999999999999999999998999987 889999999999999987 66
Q ss_pred HHHHHHHHH---HHhhCCchHHHHHHH
Q 007247 557 ALAEMMKNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 557 ~~~~~~~~~---~~~~fsw~~~a~~~~ 580 (611)
.+.++++++ ..++|||+.++++|+
T Consensus 368 ~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 368 ERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 666666665 357999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=282.38 Aligned_cols=341 Identities=21% Similarity=0.240 Sum_probs=246.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+|++..|+| |.+.++.+++.+|.++||+|.++++........... ..
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~--------------~~------------ 49 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE--------------DR------------ 49 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc--------------cc------------
Confidence 79999998644 377899999999999999999999874322111000 00
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
..+.... +... .+ ........+.+.+.. .++| +||+|..........
T Consensus 50 --~~~~~~~------------------~~~~--~~-~~~~~~~~~~~~~~~---------~~~D-ii~~~~~~~~~~~~~ 96 (355)
T cd03799 50 --AELARTR------------------YLAR--SL-ALLAQALVLARELRR---------LGID-HIHAHFGTTPATVAM 96 (355)
T ss_pred --ccccchH------------------HHHH--HH-HHHHHHHHHHHHHHh---------cCCC-EEEECCCCchHHHHH
Confidence 0000000 0000 11 111111222222211 2699 999997655444444
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.... .+.|+++++|+...... ....+++..+..+|.++++|+
T Consensus 97 ~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 97 LASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAISE 139 (355)
T ss_pred HHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECCH
Confidence 44332 37899999995322100 001356777889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+. ++... .++.+|+||+|...+.+... ....+.+.|
T Consensus 140 ~~~~~l~~~--~~~~~------~~~~vi~~~~d~~~~~~~~~-----------------------------~~~~~~~~i 182 (355)
T cd03799 140 YNRQQLIRL--LGCDP------DKIHVVHCGVDLERFPPRPP-----------------------------PPPGEPLRI 182 (355)
T ss_pred HHHHHHHHh--cCCCc------ccEEEEeCCcCHHHcCCccc-----------------------------cccCCCeEE
Confidence 999999862 23332 28999999999887765420 011245789
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ..+.++++..++ +.++.+.+..+.+.+..+++.||+++
T Consensus 183 ~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l 260 (355)
T cd03799 183 LSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFV 260 (355)
T ss_pred EEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEE
Confidence 999999999999999999999876 589999999987 344555555543 45688888888888889999999999
Q ss_pred eCCCC------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCH
Q 007247 482 IPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (611)
Q Consensus 482 ~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~ 555 (611)
+||.. |++|++++|||++|+|+|+++.|+..|+++++.+|+++ +++|+++++++|.+++++ +
T Consensus 261 ~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~ 328 (355)
T cd03799 261 LPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD--P 328 (355)
T ss_pred ecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999 99999999999999999999999999999999999987 889999999999999998 6
Q ss_pred HHHHHHHHHH---HHhhCCchHHHHH
Q 007247 556 QALAEMMKNG---MAQDLSWKGPAKK 578 (611)
Q Consensus 556 ~~~~~~~~~~---~~~~fsw~~~a~~ 578 (611)
..+.++++++ +.++|||+..+++
T Consensus 329 ~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 329 ELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 6677777665 4689999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=285.78 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=235.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+++++.+ + .||.+.++.+++++|.+.||+|+++++..... .+.. .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999875 3 69999999999999999999999999874321 0000 0011133333
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+... . .+..+ +...+.++++. .+|| +||+|......++..
T Consensus 57 ~~~~~--~---------------------~~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~~~ 97 (358)
T cd03812 57 YIPAR--K---------------------KNPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFILL 97 (358)
T ss_pred EecCC--C---------------------ccHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHHHH
Confidence 22110 0 00111 11122222222 2699 999998765555554
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.... ....++++.|+..+...+.. .. .....+.+.....+|.++++|+
T Consensus 98 ~~~~~------~~~~~v~~~~~~~~~~~~~~-----------------------~~--~~~~~~~~~~~~~~~~~i~~s~ 146 (358)
T cd03812 98 AAKKA------GVKVRIAHSHNTSDSHDKKK-----------------------KI--LKYKVLRKLINRLATDYLACSE 146 (358)
T ss_pred HHhhC------CCCeEEEEeccccccccccc-----------------------hh--hHHHHHHHHHHhcCCEEEEcCH
Confidence 44432 23445777886443211100 00 0001233456678999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+... .. ..++.+||||+|.+.+.+.... .+. +++.+.. .+.++|
T Consensus 147 ~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~i 195 (358)
T cd03812 147 EAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFVI 195 (358)
T ss_pred HHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEEE
Confidence 999988751 11 2389999999999877654320 111 3444443 356899
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+||+.++||++.+++++..+.+ ++++++|+|+|+ ..+.++++..++ .+++.+.+. .+.+..+++.||+++
T Consensus 196 ~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v 271 (358)
T cd03812 196 GHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFL 271 (358)
T ss_pred EEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEE
Confidence 999999999999999999999976 699999999988 445555555444 356766655 344667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||++|++|++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++....+
T Consensus 272 ~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~~ 338 (358)
T cd03812 272 FPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERSS 338 (358)
T ss_pred ecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhhh
Confidence 9999999999999999999999999999999999984 55554 677899999999999998 6666666
Q ss_pred HHHHHHhhCCchHH
Q 007247 562 MKNGMAQDLSWKGP 575 (611)
Q Consensus 562 ~~~~~~~~fsw~~~ 575 (611)
..++..+..+++..
T Consensus 339 ~~~~~~~~~~~~~~ 352 (358)
T cd03812 339 ESIKKKGLDADDEA 352 (358)
T ss_pred hhhhhccchhhhhh
Confidence 66655444444443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=276.06 Aligned_cols=367 Identities=26% Similarity=0.364 Sum_probs=260.6
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... . .....
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~---------------~-------~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV---------------G-------GIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee---------------c-------Cccee
Confidence 799999987774 79999999999999999999999999874432221000 0 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
. .... . . .........+.......++. .++| +||+|.+........
T Consensus 57 ~--~~~~-~--------~----------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~~ 102 (374)
T cd03801 57 R--PPPL-L--------R----------VRRLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAAL 102 (374)
T ss_pred c--CCcc-c--------c----------cchhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHHH
Confidence 0 0000 0 0 00000111112222222222 1599 899988777655543
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+... .++|+++++|+..+...... .. ........+.+..+..+|.++++|+
T Consensus 103 ~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s~ 153 (374)
T cd03801 103 AARL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVSE 153 (374)
T ss_pred HHHh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEecH
Confidence 3332 58999999997654221100 00 0001122345667889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.+. ++.+. .++.+++||+|...+.+.. ...+..... ..+.++|
T Consensus 154 ~~~~~~~~~--~~~~~------~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~--~~~~~~i 202 (374)
T cd03801 154 ATREELREL--GGVPP------EKITVIPNGVDTERFRPAP---------------------RAARRRLGI--PEDEPVI 202 (374)
T ss_pred HHHHHHHhc--CCCCC------CcEEEecCcccccccCccc---------------------hHHHhhcCC--cCCCeEE
Confidence 999999862 23221 2899999999988775431 111222222 2355799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ....++++..+ .++++.+.+..+.+.+..+++.||+++
T Consensus 203 ~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 280 (374)
T cd03801 203 LFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFV 280 (374)
T ss_pred EEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEE
Confidence 999999999999999999999876 589999999776 45555555432 345688888888788889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~ 348 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRRL 348 (374)
T ss_pred ecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHHH
Confidence 9999999999999999999999999999999999999999987 899999999999999988 6667777
Q ss_pred HHHHH---HhhCCchHHHHHHHHHHH
Q 007247 562 MKNGM---AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~~~~---~~~fsw~~~a~~~~~~~~ 584 (611)
++++. .+.|+|+..++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 77654 799999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=279.41 Aligned_cols=349 Identities=21% Similarity=0.258 Sum_probs=240.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+||++. +|. .||.+.++..|+++|++.||+|.+++........ .... .. .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~-----------~~-------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGG-----------EQ-------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCC-----------cc-------cceeee
Confidence 79999875 553 7999999999999999999999999876321111 0000 00 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC- 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~- 244 (611)
.. + +. .....+.+.++. .+|| +||+|.|...+.+.
T Consensus 58 ~~-----------------~----------~~----~~~~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~~ 93 (366)
T cd03822 58 VL-----------------D----------NP----LDYRRAARAIRL------------SGPD-VVVIQHEYGIFGGEA 93 (366)
T ss_pred ec-----------------C----------Cc----hhHHHHHHHHhh------------cCCC-EEEEeeccccccchh
Confidence 00 0 00 001112222222 1699 88888755432222
Q ss_pred --HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 245 --YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 245 --~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
.+....+ ..+.|+|+++|+...... ......+++..+..+|.+++
T Consensus 94 ~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii~ 140 (366)
T cd03822 94 GLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVIV 140 (366)
T ss_pred hHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEEE
Confidence 2221110 148999999997511000 00122455667889999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|....+.+... .+ ..++.+|+||+|...+.+.. .. ++...+ .+.
T Consensus 141 ~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~---------------------~~--~~~~~~--~~~ 185 (366)
T cd03822 141 MSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPE---------------------SL--KALGGL--DGR 185 (366)
T ss_pred eeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCch---------------------hh--HhhcCC--CCC
Confidence 974444444321 11 13899999999976654331 01 222222 356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHH-------HHHHHHHCCCceEEecc-cChHHHHH
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAHM 472 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~~ 472 (611)
++|+|+|++.+.||++.+++|++++.+ ++++|+|+|.+....... ++++ ....++.+.+. .+.+.+..
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELPE 263 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHHH
Confidence 799999999999999999999999976 689999999986433222 2222 23456888877 56778888
Q ss_pred HHHHccEEEeCCCCC--CCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 473 i~~~aDv~l~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+++.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.++.+|+++ +++|+++++++|..++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLL 332 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999 7878888899987 8999999999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 551 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++ +..+.+|++++. .++|||+.++++|.++|+
T Consensus 333 ~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 333 AD--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred cC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 97 666777777663 355999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=279.15 Aligned_cols=365 Identities=23% Similarity=0.295 Sum_probs=252.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..|+|. .||.+..+..++++|+++||+|+++++........... . ++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~--------------~--------~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV--------------V--------VVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc--------------c--------ccccc
Confidence 799999988885 89999999999999999999999999875433221000 0 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~ 244 (611)
..... +..+ ....+ .+...+...++. .+|| +||+|.... .....
T Consensus 57 ~~~~~-~~~~--------------------~~~~~-~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~~ 101 (374)
T cd03817 57 RVPTF-KYPD--------------------FRLPL-PIPRALIIILKE------------LGPD-IVHTHTPFSLGLLGL 101 (374)
T ss_pred ccccc-hhhh--------------------hhccc-cHHHHHHHHHhh------------cCCC-EEEECCchhhhhHHH
Confidence 00000 0000 00000 111122222222 2699 888886433 33333
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch-hHhHHHhhhccEEEec
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 323 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~v 323 (611)
.+.+. .++|+++++|+....- .......... ...... .+++..+..+|.++++
T Consensus 102 ~~~~~-------~~~~~i~~~~~~~~~~------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 102 RVARK-------LGIPVVATYHTMYEDY------THYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HHHHH-------cCCCEEEEecCCHHHH------HHHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEec
Confidence 33333 4899999999653200 0000000000 000111 4567778899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+..++.+.. ++.. .++.+++||+|...+.+... ...++++++. .+.+
T Consensus 156 s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~ 203 (374)
T cd03817 156 SEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIP--EDEP 203 (374)
T ss_pred cHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCC--CCCe
Confidence 9999888875 3322 26899999999887765431 1224455544 3557
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+++|++.+.||++.++++++++.+ ++++|+++|.|+ ..+.++++..++ .+++.+.+..+.+.+..+++.||+
T Consensus 204 ~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (374)
T cd03817 204 VLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADL 281 (374)
T ss_pred EEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE
Confidence 89999999999999999999999876 689999999987 455566655443 356888888888888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+.
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~~ 348 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELRR 348 (374)
T ss_pred EEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHHH
Confidence 999999999999999999999999999999999999999999987 77777 999999999998 66667
Q ss_pred HHHHHHH--HhhCCchHHHHHHHHHHHH
Q 007247 560 EMMKNGM--AQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 560 ~~~~~~~--~~~fsw~~~a~~~~~~~~~ 585 (611)
+|++++. .++++ .+++++++|++
T Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 349 RLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 7777764 34444 67777777765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-31 Score=286.31 Aligned_cols=229 Identities=14% Similarity=0.106 Sum_probs=181.5
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+.....+|.|+++|++.++.+.+. ++. ..++.+++||+|...+...+.
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~-------~~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRI-------PERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCC-------CCCeEEEcCCCCHHHcccCCc-----------------------
Confidence 344578999999999999988752 222 127889999998765532110
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----chhHHHHHHHHHHC--CCc
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEK 458 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~ 458 (611)
....+.+.++++||++++||++.+|+|+.++.+ ++++|+|+|++. .++.+.++++..++ .++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011244689999999999999999999988643 589999999974 23456677777665 467
Q ss_pred eEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc-cceec---CcceEEecccccccccC
Q 007247 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 534 (611)
Q Consensus 459 v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v 534 (611)
+.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 888888888888899999999999999999999999999999999999999965 77765 6789964
Q ss_pred CccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHcC
Q 007247 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 535 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
.|+++++++|.+++++ +++.+.+|++++. .++|||+.++++|++.++++++.+
T Consensus 407 --~~~~~la~ai~~ll~~-~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRM-RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 4999999999999985 2455566666653 477999999999999999988754
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=281.69 Aligned_cols=360 Identities=19% Similarity=0.195 Sum_probs=251.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+.|. ..||+++++.+|+++|++.||+|+++++............ .. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~-------------~~--------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR-------------AA--------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch-------------hc--------ccc-
Confidence 689999887772 4899999999999999999999999998744322211000 00 000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
...... .....++............. .++| +||+|.+.....
T Consensus 58 -~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~--- 99 (365)
T cd03809 58 -LLRLPR---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL--- 99 (365)
T ss_pred -cccccc---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc---
Confidence 000000 00000111111111111111 1699 899987665544
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+ ..++|+++++|+..+.... ..... ........+++..+..+|.++++|+
T Consensus 100 -~--------~~~~~~i~~~hd~~~~~~~-----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s~ 149 (365)
T cd03809 100 -R--------LRGVPVVVTIHDLIPLRFP-----------EYFSP----------GFRRYFRRLLRRALRRADAIITVSE 149 (365)
T ss_pred -c--------CCCCCEEEEeccchhhhCc-----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEccH
Confidence 1 1589999999976432110 00000 0001123455778889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+. ++.+. .++.+++||+|...+.+... . . +...... .+.++|
T Consensus 150 ~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~-------------------~-~-~~~~~~~--~~~~~i 198 (365)
T cd03809 150 ATKRDLLRY--LGVPP------DKIVVIPLGVDPRFRPPPAE-------------------A-E-VLRALYL--LPRPYF 198 (365)
T ss_pred HHHHHHHHH--hCcCH------HHEEeeccccCccccCCCch-------------------H-H-HHHHhcC--CCCCeE
Confidence 999998862 33322 38999999999887765432 1 1 2222222 355799
Q ss_pred EEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCCchhHHHHHHHH-HHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+|++.+.||++.+++++.++.+. +++|+++|.+........+.+. ....+++.+.+..+.+.+..+++.||++++
T Consensus 199 ~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 199 LYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999999999999999999999874 6999999987654444433321 224467888888888888899999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
||.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|.++++++|.+++.+ ++.+.+++
T Consensus 279 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 344 (365)
T cd03809 279 PSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREELR 344 (365)
T ss_pred cchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 99999999999999999999999999999999854 57765 889999999999999987 77777777
Q ss_pred HHH--HHhhCCchHHHHHHHH
Q 007247 563 KNG--MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 563 ~~~--~~~~fsw~~~a~~~~~ 581 (611)
+++ ..++|||+..++++++
T Consensus 345 ~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 345 ERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHhCCHHHHHHHHhC
Confidence 766 4688999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=285.19 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=172.3
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+++..+..+|.++++|++..+.+.+. ++. ..++.+|+||+|++.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~-------~~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKR-------NTKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCc-------CCCcEEEcCCCCHHHhccccc---------------------
Confidence 45667789999999999999998752 221 127899999999877654321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-----CcEEEEEeCCCc----hhHHHHHHHHHHC--
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILY-- 455 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~-- 455 (611)
. ...+.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+.+++++.++
T Consensus 232 ------~--~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 ------D--EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ------c--cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 0 11245799999999999999999999999875 2 599999998742 3566777777664
Q ss_pred CCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc-cccee---cCcceEEeccccccc
Q 007247 456 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 531 (611)
Q Consensus 456 ~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~l~~~~~~~~ 531 (611)
.+++.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 35788888888888889999999999999999999999999999999999999875 57887 89999985
Q ss_pred ccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHH
Q 007247 532 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAK 577 (611)
Q Consensus 532 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~ 577 (611)
.|+++++++|.+++++. +..+..+.+++ ..++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 39999999999999973 22333333322 468899998653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=284.18 Aligned_cols=227 Identities=12% Similarity=0.173 Sum_probs=174.3
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH--
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE-- 393 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 393 (611)
.+| ++++|....+.+.+. ++++.+ ++.+||||+|...|.|.... ....+..
T Consensus 339 ~sd-~v~~s~~v~~~l~~~--lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYADW--LKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHHHH--hCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhh
Confidence 445 677888888887652 455544 89999999999888765321 1112222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPL 469 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~ 469 (611)
.+++ ++.++|+++||+.++||++.+++++.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .+.
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~D 465 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRD 465 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhh
Confidence 2333 244789999999999999999999988765 689999999997 5667777776654 55766654 344
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHH-
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR- 548 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~- 548 (611)
+..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++|++++++++..
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA 535 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYA 535 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHH
Confidence 6679999999999999999999999999999999999999999999999999987 88998888887633
Q ss_pred --HHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 549 --ALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 549 --ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
+.+... ...+.+.+++.+.++|||+.++++|+++|.+
T Consensus 536 ~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 536 EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 333211 1123334444467899999999999999974
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=280.36 Aligned_cols=284 Identities=15% Similarity=0.128 Sum_probs=196.1
Q ss_pred CCCeEEEecCCcc---chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC
Q 007247 227 GEDVVFVANDWHT---SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (611)
Q Consensus 227 ~~Dvivh~hd~~~---~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (611)
+|| +||+|.... +.++.+++.. .++|+|+++|+..+. .. .++... ..+..
T Consensus 95 ~~D-vi~~~~~~~~~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~~------------~~~~~ 147 (415)
T cd03816 95 PAD-YILIQNPPSIPTLLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLGE------------NHPLV 147 (415)
T ss_pred CCC-EEEEeCCCCchHHHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccCC------------CCHHH
Confidence 699 888886333 2233333443 488999999965321 00 000000 00000
Q ss_pred CcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 304 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 304 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.....+.+..++.+|.|+++|+.+++.+.+ +|.+.+ ++.+|+||. ...|.|....
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~--------------- 202 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE--------------- 202 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH---------------
Confidence 011223355667899999999999999875 454433 899999994 4556554311
Q ss_pred HHHHHHHHH-------------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--------CCcEEEEEeCCCc
Q 007247 384 PLLKEALQA-------------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKK 442 (611)
Q Consensus 384 ~~~~~~~~~-------------~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--------~~~~lvivG~g~~ 442 (611)
.....+.+ ..++.. ++.++++++||+.++||++.|++|++.+.+ ++++|+|+|+|+
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~- 279 (415)
T cd03816 203 -EKHELFLKLAKTFLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP- 279 (415)
T ss_pred -HHHHHHHhccccccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-
Confidence 00111111 112222 234678889999999999999999999853 479999999998
Q ss_pred hhHHHHHHHHHHCC-CceEEecc-cChHHHHHHHHHccEEEeCCC---CCCCcHHHHHHHHcCCceEEcCCcccccceec
Q 007247 443 PMEKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517 (611)
Q Consensus 443 ~~~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~l~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 517 (611)
..+.++++..+++ .++.++.+ .+.+.+..+|+.||+++.|+. .|++|++++|||+||+|||+++.||..|++++
T Consensus 280 -~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~ 358 (415)
T cd03816 280 -LKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH 358 (415)
T ss_pred -cHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC
Confidence 4667777766654 34665543 577888899999999987533 47899999999999999999999999999999
Q ss_pred CcceEEecccccccccCCccCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH-hhCCchHHHHH
Q 007247 518 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMA-QDLSWKGPAKK 578 (611)
Q Consensus 518 g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~-~~fsw~~~a~~ 578 (611)
+.+|+++ + |+++++++|..++++. .++.+.+|++++.+ .+++|+...++
T Consensus 359 ~~~G~lv----------~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~ 409 (415)
T cd03816 359 GENGLVF----------G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWDR 409 (415)
T ss_pred CCCEEEE----------C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Confidence 9999986 3 8999999999999862 25677888888753 45666654443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=272.08 Aligned_cols=372 Identities=23% Similarity=0.303 Sum_probs=257.0
Q ss_pred EEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007247 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (611)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (611)
|++++..++|. ..||.+.++..++.+|.+.||+|+++++............... .. ....
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~------------~~-----~~~~-- 60 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL------------VG-----VERL-- 60 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc------------cc-----cccc--
Confidence 67888876552 4699999999999999999999999997633222210000000 00 0000
Q ss_pred EeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHHH
Q 007247 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPCY 245 (611)
Q Consensus 167 i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~~ 245 (611)
........ ..........+...+...++... +++| +||+|.... ..+...
T Consensus 61 -~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~----------~~~d-ii~~~~~~~~~~~~~~ 111 (377)
T cd03798 61 -PVLLPVVP-----------------LLKGPLLYLLAARALLKLLKLKR----------FRPD-LIHAHFAYPDGFAAAL 111 (377)
T ss_pred -ccCcchhh-----------------ccccchhHHHHHHHHHHHHhccc----------CCCC-EEEEeccchHHHHHHH
Confidence 00000000 00011112223333333333111 2699 788874332 333333
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+... .++|+++++|+........ .......++..+..+|.++++|+
T Consensus 112 ~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 112 LKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCCH
Confidence 3333 4689999999754421100 00123456777889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+ .+.. ..++.+++||+|...+.+.... . . ...+. ..+.+++
T Consensus 158 ~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~-~--~~~~~--~~~~~~i 205 (377)
T cd03798 158 ALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------E-A--RKLGL--PEDKKVI 205 (377)
T ss_pred HHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------H-H--HhccC--CCCceEE
Confidence 99999886 2222 2389999999999888765321 0 0 22222 2356799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+++|++.+.||++.++++++.+.+ ++++|+|+|.++ ..+.++++... ...++...+..+.+.+..+++.||+++
T Consensus 206 ~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 206 LFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred EEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999999999999999999999976 589999999987 33445454443 235688888888888889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||..|++|++++|||++|+|||+++.|+..+++.++.+|+++ ++.|+++++++|.+++++... .....
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~~ 352 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGRA 352 (377)
T ss_pred cchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhHH
Confidence 9999999999999999999999999999999999999999987 999999999999999998332 23333
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 562 MKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 562 ~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+.....+.|||+..++++.++|+++
T Consensus 353 ~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 353 ARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 4444679999999999999999764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=295.30 Aligned_cols=287 Identities=17% Similarity=0.209 Sum_probs=215.6
Q ss_pred CCCeEEEecCCcc-chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDWHT-SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~~~-~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
++| |+|+|.... +++++.++.. .++|+|+|.|++....+.. ++....+...... ..+...
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~~~~~~---------~~~~~~ 233 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWEMSYFR---------RLWIRF 233 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccchHHHH---------HHHHHH
Confidence 689 999996432 3444555544 4899999999764422110 0000000000000 000001
Q ss_pred chhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHH
Q 007247 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (611)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (611)
...+.+..++.||.|+++|+...+.+.. +|.+.+ ++.+||||+|.+.|.+....
T Consensus 234 ~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~----------------- 287 (475)
T cd03813 234 FESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA----------------- 287 (475)
T ss_pred HHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc-----------------
Confidence 1123456778999999999999887764 565544 89999999999888664210
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC--chhHHHHHHHHHHCC--Cce
Q 007247 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EKA 459 (611)
Q Consensus 386 ~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~~v 459 (611)
. ..++.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+++ +.+.+.++++..+++ +++
T Consensus 288 ---------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V 356 (475)
T cd03813 288 ---------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNV 356 (475)
T ss_pred ---------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeE
Confidence 0 12356899999999999999999999999876 799999999984 457777888777654 567
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------CcceEEeccccccccc
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEA 533 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~ 533 (611)
.+.+ .+.+..+++.+|++++||..|+||++++|||+||+|||+|+.||+.|++.+ |.+|+++
T Consensus 357 ~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv--------- 424 (475)
T cd03813 357 KFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV--------- 424 (475)
T ss_pred EEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE---------
Confidence 7776 344567999999999999999999999999999999999999999999998 6799987
Q ss_pred CCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 534 v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 -~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 -PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred -CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 66666776665 4688999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=271.31 Aligned_cols=339 Identities=21% Similarity=0.221 Sum_probs=234.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+.| .||.+.++..|+++|++.||+|++++..... ...+. ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 69999987655 6999999999999999999999999987432 11000 01122222
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+...... + .+ ........+...++. .+|| +|++|++.. ..+
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~~---~~~ 97 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN------------NKPD-VVISFLTSL---LTF 97 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc------------cCCC-EEEEcCchH---HHH
Confidence 22111000 0 00 000011122222222 2699 788876551 122
Q ss_pred HHHhccCCCCCCC-ceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 246 LKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 246 l~~~~~~~~~~~~-~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
+.... .+ +|++++.|+........ .......+..++.+|.++++|
T Consensus 98 ~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~s 143 (348)
T cd03820 98 LASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVLT 143 (348)
T ss_pred HHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEeC
Confidence 22211 23 49999999643211000 011113677788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..+.... ... ..++.+|+||++...+.+. ...+.+.
T Consensus 144 ~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~--------------------------------~~~~~~~ 180 (348)
T cd03820 144 EEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS--------------------------------SDLKSKR 180 (348)
T ss_pred HHHHHHhh-----ccC------CCCeEEecCCcChhhcccc--------------------------------CCCCCcE
Confidence 99972222 111 2389999999997765432 0124578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
++|+|++.+.||++.++++++++.+ ++++|+|+|.+. ....++++...++ .++.+.+. .+.+..+++.||++
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 256 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIF 256 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEE
Confidence 9999999999999999999999974 789999999987 3445555555443 34544443 45677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~~ 324 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELRK 324 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 99999999999999999999999999965 566777777799987 999999999999999998 77777
Q ss_pred HHHHHH--HHhhCCchHHHHHHH
Q 007247 560 EMMKNG--MAQDLSWKGPAKKWE 580 (611)
Q Consensus 560 ~~~~~~--~~~~fsw~~~a~~~~ 580 (611)
++++++ +.++|+|+.++++|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 325 RMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHhCHHHHHHHhc
Confidence 777776 468999999999986
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-30 Score=269.83 Aligned_cols=352 Identities=20% Similarity=0.215 Sum_probs=243.7
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.. .||...++..|+++|.+.||+|+++++...... .....|+..+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999875 488999999999999999999999997632211 0112244444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+...... ......+ .....+.++++. .+|| +||+|.+........
T Consensus 52 ~~~~~~~~--------------------~~~~~~~-~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~~ 97 (359)
T cd03808 52 PIPLDRRG--------------------INPFKDL-KALLRLYRLLRK------------ERPD-IVHTHTPKPGILGRL 97 (359)
T ss_pred eccccccc--------------------cChHhHH-HHHHHHHHHHHh------------cCCC-EEEEccccchhHHHH
Confidence 33211100 0000011 111222222222 2699 899997666665555
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... ...++++++|+..+...... + .........+..+..+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s~ 147 (359)
T cd03808 98 AARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQNE 147 (359)
T ss_pred HHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcCH
Confidence 55422 46788888886543111000 0 000112334666778999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.+ ++... ....+.+++||+|...+.+.... ...+.+.|
T Consensus 148 ~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~i 191 (359)
T cd03808 148 DDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPVF 191 (359)
T ss_pred HHHHHHHH---hcCCC----cCceEEecCCCCChhhcCccccc-----------------------------cCCCCcEE
Confidence 99999886 22211 02267778899998776554210 11356799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHH-HCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+|++.+.||++.++++++.+.+ ++++|+|+|.+..........+.. ....++.+.+. .+.+..+++.||++++
T Consensus 192 ~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ 269 (359)
T cd03808 192 LFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVL 269 (359)
T ss_pred EEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEe
Confidence 999999999999999999999974 689999999987432222111111 22345666655 3446689999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
||..|++|++++|||+||+|||+++.++..|++.++.+|+++ +++|+++++++|..++.+ ++.+.+++
T Consensus 270 ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 337 (359)
T cd03808 270 PSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMG 337 (359)
T ss_pred cCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 899999999999999988 66666666
Q ss_pred HHH---HHhhCCchHHHHHHH
Q 007247 563 KNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 563 ~~~---~~~~fsw~~~a~~~~ 580 (611)
+++ +.++|||+.++++|+
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhh
Confidence 665 468999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=273.46 Aligned_cols=234 Identities=40% Similarity=0.679 Sum_probs=175.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC-ceEEE--------EEeCCeeeEEEEEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (611)
||++|++|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999776665421 11112 22222 25678888
Q ss_pred eeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecC
Q 007247 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236 (611)
Q Consensus 157 ~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd 236 (611)
...+|+++++++++.++.+ ..+|++. +.+|.++..||.+|+++++++++.+.+ +|| |||+||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hD 141 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHD 141 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEEC
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecC
Confidence 8889999999999998876 5699877 778999999999999999999998765 599 999999
Q ss_pred CccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhh
Q 007247 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 316 (611)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 316 (611)
|+++++|.+++..++..+.+.++|+++|+||+.+||.++...+..+++|...+..... ......+++++.++..
T Consensus 142 W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~------~~~~~~in~lk~gi~~ 215 (245)
T PF08323_consen 142 WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDE------YEFYGQINFLKAGIVY 215 (245)
T ss_dssp GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTT------TEETTEEEHHHHHHHH
T ss_pred chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccc------cccccccCHHHHHHHh
Confidence 9999999999998877777789999999999999999998888888888754322111 1123578999999999
Q ss_pred ccEEEecCHHHHHHHHcCcCCCcccchhh
Q 007247 317 SDMVLTVSPHYAQELVSGEDKGVELDNII 345 (611)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~ 345 (611)
||.|+|||+.+++++.+ ..+|..++.++
T Consensus 216 AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 216 ADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp SSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred cCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 99999999999999986 33444555444
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=270.60 Aligned_cols=447 Identities=17% Similarity=0.202 Sum_probs=265.2
Q ss_pred EeeeecCccccccHHHHhccchHHHHh-CCCeEEEEeecCCccc-ccCCC-ceE---EEE---EeCCeeeEEEEEEeeec
Q 007247 90 VGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYK-DAWDT-DVV---IEL---KVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~-~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~ 160 (611)
+++|... +.||+=+++..=|+.+++ .|-+..++.|...+.. ...+. ... +.. ......-.+++-+..+.
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 4455433 789999999998888765 5889999988754211 11100 000 000 00111234556666677
Q ss_pred CceEEE-EeCccch-------hhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhh-HHhccCCCCCCCCCCCCCeE
Q 007247 161 GVDRVF-VDHPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP-RILNLNSNKYFSGPYGEDVV 231 (611)
Q Consensus 161 gv~~~~-i~~~~~~-------~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~Dvi 231 (611)
|-+++. +|...++ ...|...+ +-++..+.||.+-. -|.+.+...++.+ +.+.. -++| |
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~-~fgy~~~~~i~~~~~~~~~---------~~~d-V 151 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAI-IFGFLVAWFLGEFAEQFDD---------EPAV-V 151 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHH-HHHHHHHHHHHHHHhhccC---------CCCe-E
Confidence 877664 4543333 34664443 44445555565443 3444444444322 22111 2589 9
Q ss_pred EEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCcccccc-CcccccccCCCcccccccccccCCC---CCCCCcch
Q 007247 232 FVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKI 307 (611)
Q Consensus 232 vh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 307 (611)
+|+|||+++.....++... .++|.|+|+|.... ||. ..+ . ..+...+...++.. +.....+.
T Consensus 152 iH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g------~-~~~y~~l~~~~~d~eA~~~~I~~r~ 217 (590)
T cd03793 152 AHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAG------N-VDFYNNLDYFDVDKEAGKRGIYHRY 217 (590)
T ss_pred EEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccC------C-cccchhhhhcchhhhhhcccchHHH
Confidence 9999999999999999633 58999999997665 553 111 0 11111111111110 00011233
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchh-hhccHH-
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKPL- 385 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~-~~~~~~- 385 (611)
..++.+...||.+++||+.++.++.. .++.+++ + +||||+|+..|.+..+. ..+ ..+|..
T Consensus 218 ~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ki 279 (590)
T cd03793 218 CIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEKI 279 (590)
T ss_pred HHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhhh
Confidence 46778889999999999999999986 3666655 3 89999999998765321 000 011111
Q ss_pred ---HHHHHHHHhCCCCCCCCcEEEE-EcCccc-ccCHHHHHHHHHhccc------CC---cEEEEEeCCC----------
Q 007247 386 ---LKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN---VQIIVLGTGK---------- 441 (611)
Q Consensus 386 ---~~~~~~~~~gl~~~~~~~~il~-iGrl~~-~Kg~d~li~a~~~l~~------~~---~~lvivG~g~---------- 441 (611)
....++..++++ +++++++| +||++. +||+|.+|+|+++|.. .+ +-|+|+=.+.
T Consensus 280 ~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g 357 (590)
T cd03793 280 NEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKG 357 (590)
T ss_pred hHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcc
Confidence 122345556654 34567777 799998 9999999999999865 12 2244433321
Q ss_pred ----chhHHHHHHHHH----------------------------------------------------------------
Q 007247 442 ----KPMEKQLEQLEI---------------------------------------------------------------- 453 (611)
Q Consensus 442 ----~~~~~~l~~l~~---------------------------------------------------------------- 453 (611)
+.+.+.++++..
T Consensus 358 ~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~ 437 (590)
T cd03793 358 QAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRR 437 (590)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHH
Confidence 011111111100
Q ss_pred ---HC--C--CceEEecccC-------hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc----ccce
Q 007247 454 ---LY--P--EKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTV 515 (611)
Q Consensus 454 ---~~--~--~~v~~~~~~~-------~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v 515 (611)
-. . .++.++..|- +....+++++||++++||.+||||++++|||+||+|+|+|+.+|+ .|++
T Consensus 438 ~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 438 IQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred hcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 00 0 1333333331 122447999999999999999999999999999999999999998 4555
Q ss_pred ecC-cceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 516 EEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 516 ~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~-~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.++ ..|+.+-+... .--+.++++++++|.++++....+.....+. ...++.|+|++.++.|.+.|+.++.
T Consensus 518 ~~~~~~gi~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 518 EDPESYGIYIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred ccCCCceEEEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 444 35666511000 0014668889999998885411122222211 1346889999999999999998764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=276.37 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=169.1
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..++.+|.++++|+..++.+.+. .+.. ..++.+||||+|.+.|.+....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~------~~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEA------AGRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCC------CCCeEEeecccchhhcCCCccc-------------------
Confidence 345677889999999999999998752 1222 2278999999999888764321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHH----HHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li----~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (611)
.... ..+.++|+|+|++.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 0001 12457899999999999999988 45555543 7899999999873 345555433 34776
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHH
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.+..+ + +..+++.||++++||+. ||+|++++|||+||+|||+|+.++. .+..++++|+++ + +|++
T Consensus 285 ~G~v~-~-~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA-D-VRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC-C-HHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe----------C-CCHH
Confidence 66555 3 55799999999999985 9999999999999999999997542 333345678875 5 8999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 541 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 541 ~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|+
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999987 66667777666 3589999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=270.93 Aligned_cols=208 Identities=16% Similarity=0.120 Sum_probs=158.7
Q ss_pred ccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCC
Q 007247 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (611)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 396 (611)
||.|+++|....+ +.. . .+. ..||||.+.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq~-L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQD-LPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHHH-hcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 8999999977763 321 0 222 227999999988642 122245666
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH
Q 007247 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 397 ~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
+..+ +.++|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++.++.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5332 458999999999999999999998865 589999999998 5667777777665445544432 2234699
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
+.+|+||+||.+|+||++++||||||+|||+++.+|. +++.++.+|++ .+|.++++++|.+++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd-- 681 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALAN-- 681 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhC--
Confidence 9999999999999999999999999999999999985 45777888885 38999999999999997
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 555 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
++....+.. ...|||+.+++++++.-+
T Consensus 682 ~~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 682 EPQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred chhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 332222222 458999999999988654
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-28 Score=252.86 Aligned_cols=334 Identities=22% Similarity=0.252 Sum_probs=224.3
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+. .||.+.++..|+++|.+.||+|.+++............. ... .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NVK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------chh-------hhcee
Confidence 6899998642 599999999999999999999999997643222110000 000 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCC-ccchHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~-~~~~~~~ 244 (611)
..... . + ..........++++.. ++| +||+|.. .+.++..
T Consensus 58 ~~~~~---~----------~-------------~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 98 (353)
T cd03811 58 VLKLK---S----------L-------------RDLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLAL 98 (353)
T ss_pred eeecc---c----------c-------------cchhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHHH
Confidence 00000 0 0 0001122233333332 599 8888876 3333332
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
+... .++|+++++|+......... . ......+..+..+|.++++|
T Consensus 99 ~~~~--------~~~~~i~~~~~~~~~~~~~~-----------~----------------~~~~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 99 LAAR--------LGTKLIVWEHNSLSLELKRK-----------L----------------RLLLLIRKLYRRADKIVAVS 143 (353)
T ss_pred HHhh--------cCCceEEEEcCcchhhhccc-----------h----------------hHHHHHHhhccccceEEEec
Confidence 2221 26899999997544211000 0 00024566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..++.+.+. ++.+ ..++.+|+||+|...+.+...+ .. ..+. ..+.++
T Consensus 144 ~~~~~~~~~~--~~~~------~~~~~vi~~~~~~~~~~~~~~~-------------------~~---~~~~--~~~~~~ 191 (353)
T cd03811 144 EGVKEDLLKL--LGIP------PDKIEVIYNPIDIEEIRALAEE-------------------PL---ELGI--PPDGPV 191 (353)
T ss_pred cchhhhHHHh--hcCC------ccccEEecCCcChhhcCcccch-------------------hh---hcCC--CCCceE
Confidence 9999998862 2221 2389999999998877654321 00 1222 235689
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
|+++||+.+.||++.++++++++.+ ++++|+|+|.++ ....++++...+ .+++.+.+..+ .+..+++.||++
T Consensus 192 i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~~d~~ 267 (353)
T cd03811 192 ILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQS--NPYPYLKAADLF 267 (353)
T ss_pred EEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEecccC--CHHHHHHhCCEE
Confidence 9999999999999999999999976 589999999887 334444444443 24566655432 355799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHH---HHHHHHHHhcCHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQA 557 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~~~~ 557 (611)
++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|.++++ +.+..++++ ++.
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~~ 335 (353)
T cd03811 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PEL 335 (353)
T ss_pred EeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hHH
Confidence 99999999999999999999999999999999999999999987 899999994 455555444 455
Q ss_pred HHHHHHH
Q 007247 558 LAEMMKN 564 (611)
Q Consensus 558 ~~~~~~~ 564 (611)
+.+++.+
T Consensus 336 ~~~~~~~ 342 (353)
T cd03811 336 RERLAAA 342 (353)
T ss_pred HHHHHHH
Confidence 5556553
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-29 Score=261.73 Aligned_cols=205 Identities=20% Similarity=0.247 Sum_probs=169.8
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+.+..++.+|.++++|+..++.+.+. ++ .+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCC----------------------
Confidence 44566789999999999999998752 22 1467899999988776542
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChH
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
...+.++|+||+.+.||++.+++|+.++. ++|+|+|+|+ ..+.+++ ...+++.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 12357999999999999999999999883 8999999987 3444444 445679999988998
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
.+..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 88899999999999999 99999999999999999999999999999999999987 99999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHhhCCchHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGMAQDLSWKGPAKKW 579 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~ 579 (611)
+++++. ....++.++ .++|+|+...+++
T Consensus 323 l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 999842 233334333 3679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=268.72 Aligned_cols=218 Identities=17% Similarity=0.127 Sum_probs=172.8
Q ss_pred HhhhccEEEecCHHHHHHHHcCc-CCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~-~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
....+|.++++|+..++.+.+.. .++.. ..++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc-------------------------
Confidence 35578999999999888876421 12211 23789999998654333211
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccCh
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 467 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (611)
.++...|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~-~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGH-R- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCC-C-
Confidence 1234689999999999999999999999875 799999999997 4567777776653 45666653 2
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCc----cC----
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDP----VD---- 538 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~----~d---- 538 (611)
.+..+++.||++++||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++ ++ +|
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv----------~~~~~~~d~~~~ 453 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLI----------PIDEEEDDEDQI 453 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEE----------eCCccccchhHH
Confidence 24579999999999999999999999999999999999986 899999999999997 42 23
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
++++|++|.++++ ++.+.+|++++. +++|||+.++++|+++++++
T Consensus 454 ~~~la~~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 454 ITALAEKIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 8999999999994 345677777774 68999999999999999764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=246.47 Aligned_cols=225 Identities=16% Similarity=0.225 Sum_probs=170.0
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 45566677788999999999999986 45542 23 47899999988765321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCCchhHHHHHHHHHHCCCceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (611)
..++++++.... +.++|+++||+.++||++.|++|++++.+ + +++++++|.+ .++++ ..++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 345556654322 45789999999999999999999999865 3 4688888742 23332 24556777
Q ss_pred eccc---ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------------------Ccc
Q 007247 462 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 520 (611)
Q Consensus 462 ~~~~---~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------------------g~~ 520 (611)
.+.+ +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.+ .++
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 6432 4667788999999999999999999999999999999999999999997552 234
Q ss_pred eEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHH
Q 007247 521 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 581 (611)
Q Consensus 521 G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (611)
||++ +..|+++++++|.++++..+++.+ .+.....+++|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5654 889999999999999776434333 2333346799999999999974
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=254.00 Aligned_cols=231 Identities=14% Similarity=0.153 Sum_probs=171.4
Q ss_pred hHhHHH-hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 308 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 308 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
.++... ...+|.++++|+..++.+.+ .|.+. +.++.+||||+|.+.|.+....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 345555 57899999999999999875 34321 1278999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
..+.+++++.|++.++||++.|++|++++.+ ++++++|+|++..+ ..+. ...+ + .+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG-V--KTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc-e--ecc
Confidence 1134577788899999999999999999976 68999999976521 1111 1111 1 233
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccc-cc--------ccccCC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF-SV--------DCEAVD 535 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~-~~--------~~~~v~ 535 (611)
.+.+.+..+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++..- .+ .|=++-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 456778889999999999999999999999999999999999999999999999999886210 00 001112
Q ss_pred ccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHH
Q 007247 536 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~ 585 (611)
+.|.+++++++.+++.+.+++.+.++..++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 347788999999999874334444433332 47999999999999999975
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=256.15 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=179.5
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+.+..+..+|.++++|+..++.+.+. ++...+ ++.+++||++...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556789999999999999998752 444333 889999999876553321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeCCCchhHHHHHHHHHHCC--CceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~ 461 (611)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.++++....+ +++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245789999999999999999999999976 2 57788899987 4566666665443 45778
Q ss_pred ecccChHHHHHHHHH--ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc-cC
Q 007247 462 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 538 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~--aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~-~d 538 (611)
.+..+.+.+..+++. +|++++||..|++|++++|||+||+|||+|+.||..|++.++.+|+++ ++ +|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 888888777788875 789999999999999999999999999999999999999999999987 55 58
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~ 580 (611)
+++++++|.+++++ ++.+.+|++++ +.++|||+...+++.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 67777777766 469999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-27 Score=248.99 Aligned_cols=245 Identities=15% Similarity=0.103 Sum_probs=173.2
Q ss_pred CCCeEEEecCCccc---hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC
Q 007247 227 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (611)
Q Consensus 227 ~~Dvivh~hd~~~~---~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (611)
+|| +||+|..... +.+..+.+. .++|+++++|+..+. .+. .+... .....
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~~------~~~~~------------~~~~~ 152 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LLA------LSLGR------------SHPLV 152 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HHh------cccCC------------CCHHH
Confidence 699 8999864432 223333333 478999999975321 000 00000 00000
Q ss_pred CcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 304 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 304 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.....+++..++.+|.++++|+.+.+.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~--------------- 205 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE--------------- 205 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch---------------
Confidence 1122334666788999999999999998751 232 268899984 4556554210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc-------------------cCCcEEEEEeCCCchh
Q 007247 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPM 444 (611)
Q Consensus 384 ~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~-------------------~~~~~lvivG~g~~~~ 444 (611)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ .
T Consensus 206 --------~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~ 272 (371)
T PLN02275 206 --------I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--Q 272 (371)
T ss_pred --------h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--C
Confidence 0 0111 13357889999999999999999998872 2689999999998 4
Q ss_pred HHHHHHHHHHCC-CceEEecc-cChHHHHHHHHHccEEEeCC--C-CCCCcHHHHHHHHcCCceEEcCCcccccceecCc
Q 007247 445 EKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 519 (611)
Q Consensus 445 ~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~l~pS--~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~ 519 (611)
.+.++++..+++ .++.+.+. .+.+.+..+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|+|.++.
T Consensus 273 ~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~ 352 (371)
T PLN02275 273 KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGK 352 (371)
T ss_pred HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCC
Confidence 566777766554 34666664 56788889999999999864 2 3899999999999999999999999999999999
Q ss_pred ceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 520 TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 520 ~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+|+++ + |+++++++|.+++
T Consensus 353 ~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 353 NGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CeEEE----------C--CHHHHHHHHHHhC
Confidence 99987 4 6999999998864
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=243.31 Aligned_cols=215 Identities=20% Similarity=0.217 Sum_probs=173.4
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
+...+..+|.++++|+..++.+... ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999988752 2211 14889999999876654310
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEeccc
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKF 465 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~ 465 (611)
.....+.++++||+.+.||++.+++++.++.+ ++++|+|+|.|.. ...++++.... ++++.+.+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE--EEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch--HHHHHHHHHHcCCcceEEEcC-C
Confidence 01244689999999999999999999999975 7899999999873 44455554443 34555554 4
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCccCHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
. +.+..+++.||++++||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ +++|++++++
T Consensus 269 ~-~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 T-RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred C-CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3 346679999999999999999999999999999999999987 899999999999987 8999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 579 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~ 579 (611)
+|..++++ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 777888887775 5899999999876
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=244.64 Aligned_cols=291 Identities=16% Similarity=0.190 Sum_probs=203.1
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
.| +|++||+|..++|.+++... +++|++|.+|... |... .+..+ | ..
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hipf-----P~~e---------~~~~l--------p----~~ 178 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPF-----PSSE---------IFRCL--------P----WR 178 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCC-----CChH---------HHhhC--------C----Ch
Confidence 57 99999999999999998764 6889999999432 2111 11000 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccch--------hhhccceeEeeCCcccCCcCCCCccccccccCcchh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN--------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~--------~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (611)
..+-.++..+|.|.+.+..+...+.+....-..++. .-+..++.+||||+|++.|.+...
T Consensus 179 ~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~------------ 246 (460)
T cd03788 179 EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA------------ 246 (460)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc------------
Confidence 233456778999999998877665542211111100 011247899999999988865421
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCCC-------chhHH
Q 007247 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPMEK 446 (611)
Q Consensus 380 ~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~g~-------~~~~~ 446 (611)
.+..+..+++..+.. ++.++|+++||+++.||++.+++|++++.+ ++ ++|+++|.+. ..+.+
T Consensus 247 ---~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~ 321 (460)
T cd03788 247 ---SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRR 321 (460)
T ss_pred ---CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHH
Confidence 111122233333333 256899999999999999999999999865 33 6788887542 13455
Q ss_pred HHHHHHHHC----C----CceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCccccc
Q 007247 447 QLEQLEILY----P----EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 513 (611)
Q Consensus 447 ~l~~l~~~~----~----~~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 513 (611)
+++++..+. + ..+.++. ..+.+.+..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+
T Consensus 322 ~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~ 401 (460)
T cd03788 322 EVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE 401 (460)
T ss_pred HHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh
Confidence 555554331 1 1244443 447788889999999999999999999999999999999 99999888887
Q ss_pred ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHH
Q 007247 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 582 (611)
Q Consensus 514 ~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (611)
. +.+|+++ +|.|+++++++|.++++++ ++.+..+.+++ ...+|||+..+++++.-
T Consensus 402 ~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 402 E---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred h---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 7 4678887 9999999999999999973 34444454443 24789999999988754
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-25 Score=238.22 Aligned_cols=292 Identities=17% Similarity=0.209 Sum_probs=204.2
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|.+||+|..++|.+++... ++.++.|..|-. ||..+ .+..+ | ..
T Consensus 128 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~e---------~f~~l--------p----~r 174 (456)
T TIGR02400 128 GD-IVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSSE---------IYRTL--------P----WR 174 (456)
T ss_pred CC-EEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChH---------HHhhC--------C----cH
Confidence 36 99999999999999999875 688999999932 33211 11100 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----hhhccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..+|.|-+.+..+++.+.+... .|.+... .-+..++.++|||+|++.|.+....
T Consensus 175 ~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------ 242 (456)
T TIGR02400 175 RELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------ 242 (456)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------
Confidence 34556788999999999999988775322 1221110 0134578999999999988654211
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeC-----CC--chhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~-----g~--~~~~~~ 447 (611)
.........++++++ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..++++
T Consensus 243 ~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~ 317 (456)
T TIGR02400 243 PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQ 317 (456)
T ss_pred hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHH
Confidence 000111224555553 55799999999999999999999999865 3 366887753 22 124445
Q ss_pred HHHHHHH----CCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccccc
Q 007247 448 LEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 514 (611)
Q Consensus 448 l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 514 (611)
++++... +.. .+.++ ..++.+.+..+|+.||++++||..||||++++|||+||+| +|+|+.+|..+.
T Consensus 318 i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~ 397 (456)
T TIGR02400 318 VEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE 397 (456)
T ss_pred HHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH
Confidence 5555321 110 12222 2446778889999999999999999999999999999999 999999898888
Q ss_pred eecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 515 v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
+. +|+++ +|.|++++|++|.++++++ ++.+.++.+.. ....||+...++++++-+
T Consensus 398 l~---~gllV----------nP~d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 398 LN---GALLV----------NPYDIDGMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred hC---CcEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 74 68876 9999999999999999974 23333333222 246699999999887654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-24 Score=224.91 Aligned_cols=342 Identities=16% Similarity=0.054 Sum_probs=223.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++.. .||...+...|+++|.++||+|.+++........ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 899999864 4888888899999999999999999875311000 001136666
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.++.+..... . ..........+...+..+.+.+.. ++|| |||+|.+...+.+.
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~---------~~pD-vv~~~~~~~~~~~~ 107 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR---------FKPD-VVVGFGGYVSGPGG 107 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCcchhHHH
Confidence 66643321110 0 011111222233333333333322 2699 99999877766555
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+.+. .++|++++.|+..+ . ...+..+..+|.+++.+
T Consensus 108 ~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 108 LAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATAF 144 (357)
T ss_pred HHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheECc
Confidence 54443 48899987763211 0 11233466899999998
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..... .+ ..++.+|+||+|...+.+.. .+.+++++ ++.++
T Consensus 145 ~~~~~~--------~~------~~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAFPE--------FF------KPKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKPT 185 (357)
T ss_pred hhhhhc--------cC------CCCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCeE
Confidence 843211 12 23899999999987654321 11234443 24578
Q ss_pred EEEEcCcccccCHHHHH-HHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 405 IGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li-~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ . .+.++.+. .|. +....+++.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~-g~~-~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVV-PFI-DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEe-ehH-hhHHHHHHhCCEEEEC
Confidence 89999988888865555 99988865335577889887 34444444 3 44334443 333 4466899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcc--------cccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHhc
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~~ 553 (611)
|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ ++.| +++++++|.+++++
T Consensus 260 ~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~- 324 (357)
T PRK00726 260 AG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD- 324 (357)
T ss_pred CC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC-
Confidence 62 689999999999999987643 23567778899987 7777 99999999999998
Q ss_pred CHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 554 ~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++.+.+|++++. .+.++-+.+++.|+++.+
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 -PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred -HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777788888774 467888888888877654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-23 Score=215.68 Aligned_cols=324 Identities=15% Similarity=0.071 Sum_probs=207.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
+|++.+.+ .||-..++..|+++|.++||+|.+++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 5888888899999999999999999876321111 0011355555
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.+..+ . .......+..+.+...++.+.+.. .+|| +||+|.....+....
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~~---------~~pD-vI~~~~~~~~~~~~~ 106 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILKK---------FKPD-VVVGFGGYVSGPVGL 106 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCCcchHHHH
Confidence 5543221110 0 011111111222333333333321 2699 888887655444444
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.+. .++|++++.|+... . .+.+.....+|.++++|+
T Consensus 107 ~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 107 AAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSFP 143 (350)
T ss_pred HHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcch
Confidence 4433 47888876653110 0 112334556999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+ .+.++.+|+||+|...+.+.. . +++++++. +.+++
T Consensus 144 ~~~~~~--------------~~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~~~~i 184 (350)
T cd03785 144 ETAKYF--------------PKDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--GKPTL 184 (350)
T ss_pred hhhhcC--------------CCCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--CCeEE
Confidence 877641 122889999999976654321 1 55666653 45678
Q ss_pred EEEcCcccccCHHH-HHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 406 GFIGRLEEQKGSDI-LAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 406 l~iGrl~~~Kg~d~-li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
++.|+....|+.+. ++++++.+.++++++ +++|+|. . +.+++...++.+++.+.+.. +.+..+|+.||+++.+
T Consensus 185 ~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~-~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 185 LVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--L-EEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred EEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--H-HHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEEC
Confidence 88888777777654 568888887666764 4778773 3 44555544444567665544 4566899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcc--------cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHhc
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 553 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~ 553 (611)
|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ +++ |+++++++|.+++++
T Consensus 260 sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 260 AG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC-
Confidence 62 689999999999999987654 24667777899987 666 899999999999986
Q ss_pred CHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM 566 (611)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (611)
++.+.+|++++.
T Consensus 325 -~~~~~~~~~~~~ 336 (350)
T cd03785 325 -PERLKAMAEAAR 336 (350)
T ss_pred -HHHHHHHHHHHH
Confidence 777788887764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-22 Score=214.54 Aligned_cols=322 Identities=14% Similarity=0.081 Sum_probs=201.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||+|++.+ .||-......|+++|.++||+|++++.......+ . ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 689988865 3444445568999999999999999864221000 0 01135566
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.++...+... . .......+..+.....++.+.+.. .+|| +||+|.+...+.+.
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~---------~~pD-vVi~~~~~~~~~~~ 106 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK---------FKPD-AVIGFGGYVSGPAG 106 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEEcCCcccHHHH
Confidence 55543221110 0 111111112223333333333332 2699 88988765555444
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+... .++|++++.|+..+ . ...+...+.+|.++++|
T Consensus 107 ~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 107 LAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEECc
Confidence 44443 36788754332110 0 11233466899999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+ +..+|+||+|...+.+... +++++++ ++.++
T Consensus 144 ~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~~ 181 (348)
T TIGR01133 144 PGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLR--EGKPT 181 (348)
T ss_pred hhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCC--CCCeE
Confidence 9876543 2368999998765543210 2245665 35578
Q ss_pred EEEEcCcccccCHHH-HHHHHHhcccCCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 405 IGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 405 il~iGrl~~~Kg~d~-li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
|+++|+....|+... ++++++++.+++++++++ |++. . +.+++...+++ +...+.|....+..+|+.||+++.
T Consensus 182 i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~ 256 (348)
T TIGR01133 182 ILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVIS 256 (348)
T ss_pred EEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEE
Confidence 999998888888655 568888886656777544 4333 2 45666555544 222222333256689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcc-------cccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHhc
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~~ 553 (611)
+| + |++++|||++|+|+|+++.++ ..+++.++++|+++ ++.| +++++++|.+++++
T Consensus 257 ~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~- 321 (348)
T TIGR01133 257 RA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD- 321 (348)
T ss_pred CC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC-
Confidence 65 2 789999999999999998654 23578888999986 7766 99999999999987
Q ss_pred CHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM 566 (611)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (611)
++.+.+|++++.
T Consensus 322 -~~~~~~~~~~~~ 333 (348)
T TIGR01133 322 -PANLEAMAEAAR 333 (348)
T ss_pred -HHHHHHHHHHHH
Confidence 777788877763
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-22 Score=212.02 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=159.2
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
..++|.++++|+...+.+.+ +|++.+ ++.++.|.++.. |.+..+ ...++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 55899999999999999886 566544 677665555432 222111 3346778
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+|++.+ ...++++.|++...|+++.+++++.+. ++++++++|++.....+.++++...+++++.+.+..+ .+.++
T Consensus 196 ~~l~~~-~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l 270 (380)
T PRK13609 196 YQLCPN-KKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDEL 270 (380)
T ss_pred cCCCCC-CcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHH
Confidence 888743 233556678898899999999998754 6899988764443456777777666665677765442 35679
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Ccccc----cceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
++.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999874 466999999999999999986 55532 23333 34433 45799999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
++++ ++.+.+|++++. ...++++.+++.+++++...
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9987 777888887764 46689999999998877643
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=229.88 Aligned_cols=298 Identities=17% Similarity=0.242 Sum_probs=205.8
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +++++.|..|.. ||... .+..+ | ..
T Consensus 148 ~d-~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e---------~fr~l--------p----~r 194 (797)
T PLN03063 148 GD-VVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSE---------IYKTL--------P----SR 194 (797)
T ss_pred CC-EEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHH---------HHhhC--------C----CH
Confidence 36 99999999999999999875 799999999943 33211 11100 0 01
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCccc--chhh---hccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.+||||+|+..|.+....
T Consensus 195 ~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~------------ 262 (797)
T PLN03063 195 SELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL------------ 262 (797)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC------------
Confidence 23446788999999999999988775221 12111 0111 22478899999999887643210
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCC-----C--chhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTG-----K--KPMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~g-----~--~~~~~~ 447 (611)
..-......+++.++ ++++|+++||+++.||++.+++|++++.+ ++ +.|++++.. + ..++++
T Consensus 263 ~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~ 337 (797)
T PLN03063 263 PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQ 337 (797)
T ss_pred hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHH
Confidence 000011223444433 45799999999999999999999999865 44 445544422 1 124445
Q ss_pred HHHHHHHCCCc--------eEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccccc
Q 007247 448 LEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 514 (611)
Q Consensus 448 l~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 514 (611)
++++......+ +.+.. .++.+.+..+|+.||++++||..||+|++.+|||+||+| +|+|..+|..+.
T Consensus 338 v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~ 417 (797)
T PLN03063 338 VHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS 417 (797)
T ss_pred HHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh
Confidence 55554221111 11121 346677888999999999999999999999999999999 999999999887
Q ss_pred eecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007247 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 515 v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ +.+|+++ +|.|++++|++|.++|+.. ++++.+..+.. ....++|...++.+++.|+++..
T Consensus 418 l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 418 L--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred h--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 6 4468876 9999999999999999953 33333333322 35789999999999998887764
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-21 Score=204.43 Aligned_cols=222 Identities=16% Similarity=0.160 Sum_probs=162.4
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..++.+|.|+++|+...+.+.. ++ .++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---------~~i~~i~ngvd~~~f~~~~~~~------------------ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---------PNVVLVPNGVDYEHFAAARDPP------------------ 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---------CCEEEcccccCHHHhhcccccC------------------
Confidence 56788899999999999999988775 33 1789999999998887643210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
...+.. ...+.++|+|+|++.+.++++.+.++++.. ++++|+|+|.++... ....+. ...++.+.+..+.
T Consensus 195 ~~~~~~----~~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADL----AALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHH----hcCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 000000 112558999999999988888777666543 789999999983211 111221 1246888888888
Q ss_pred HHHHHHHHHccEEEeCCCC-----CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHH
Q 007247 468 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 542 (611)
+.+..+++.+|++++|+.. +++|++++|||+||+|||+++.+.+.+ .+..+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-----------eCCCHHHH
Confidence 8899999999999999864 468999999999999999998655443 3333443 56799999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 543 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 543 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
+++|.+++.+..+....+ ..+ +.+++||+..++++++.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999877643333322 222 67899999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=227.56 Aligned_cols=296 Identities=18% Similarity=0.231 Sum_probs=204.3
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... ++.++.|..|-..+... .+.. +| ..
T Consensus 134 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~----~f~~--lp--------------------~~ 180 (726)
T PRK14501 134 GD-VVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFE----VFRL--LP--------------------WR 180 (726)
T ss_pred CC-EEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChH----HHhh--CC--------------------Ch
Confidence 36 99999999999999999875 68999999994433211 0111 11 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccc--hh---hhccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~---~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..+|.|-+.+..+++.+.+... .+.+.. .+ -+..++.++|||+|++.|.+....
T Consensus 181 ~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------ 248 (726)
T PRK14501 181 EEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------ 248 (726)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------
Confidence 23456788999999999998887665221 111100 00 022368999999999988654210
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCC----c---hhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~----~---~~~~~ 447 (611)
..-....+.+++.. .++++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + ++++.
T Consensus 249 ~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~ 323 (726)
T PRK14501 249 PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKRE 323 (726)
T ss_pred chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHH
Confidence 00001122344442 255799999999999999999999999865 3 37899887431 1 34445
Q ss_pred HHHHHHHC----CC----ceE-EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCccccc
Q 007247 448 LEQLEILY----PE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVD 513 (611)
Q Consensus 448 l~~l~~~~----~~----~v~-~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e 513 (611)
++++..+. .. .+. +...++.+.+..+|+.||++++||..||||++++|||+||+ ||++...|+..+
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~ 403 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE 403 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH
Confidence 55554321 11 122 33455778888999999999999999999999999999954 666666788777
Q ss_pred ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH--HHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM--MKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 514 ~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~--~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++ .|+++ +|.|++++|++|.+++.++..++...+ .++ ....|||+..++++++.|.++..
T Consensus 404 l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~-~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 404 LA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQE-RLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred hC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 75 37876 999999999999999986423322222 222 24789999999999999998864
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=204.76 Aligned_cols=234 Identities=17% Similarity=0.131 Sum_probs=163.2
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..+..+|.|+++|+..++.+.+ +|++ +. +.+++|+ +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 35566788899999999999999986 5543 22 6777874 222222111 01123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCce-E----
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA-R---- 460 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v-~---- 460 (611)
..++++++ + +.+++++.|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+-.. .
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45666666 3 44688888874 6889999999999865 79999999998732 245666655543211 1
Q ss_pred ---------EecccChHHHHHHHHHccEEEe-CCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecC-cceEEecccc
Q 007247 461 ---------GVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 528 (611)
Q Consensus 461 ---------~~~~~~~~~~~~i~~~aDv~l~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~l~~~~~ 528 (611)
.++. ....+..+|+.||++++ +|..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 1111 12456689999999655 67779999999999999999999864 6666665542 457765
Q ss_pred cccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 529 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 529 ~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.++|+++++++|.+++++ ++.+.+|++++...--+.....+++.+++++.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999987 7777888877743111225778888888877654
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-21 Score=181.30 Aligned_cols=164 Identities=27% Similarity=0.445 Sum_probs=138.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc---cCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEE
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 461 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 461 (611)
++..+...+.+ .+.++|+|+||+.+.||++.+++++..+. .++++|+|+|++. +...+..+...+ ..++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 44556666655 35689999999999999999999999996 4799999999766 555566655543 357888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHH
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 541 (611)
.+....+.+..+++.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888787788899999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 542 VSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 542 la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999998 678888887764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-20 Score=197.76 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=156.8
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
...+|.++++|+..++.+.+ +|++.+ ++.+++++++.+.+.+... +.+++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 46899999999999999886 676654 8888888888765443221 5568889
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc------cCCcE-EEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
+|++. +.++|+++|+....|++..+++++..+. .++.+ ++++|.+. ...+.++++.. ..++.+.+..+
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 99974 4589999999999999999999998753 35676 56777663 34455555422 23465554443
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC------cccccceecCcceEEecccccccccCCccCHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.++++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 4668999999999865 48899999999999999983 444 34445566764 38999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHH
Q 007247 541 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 582 (611)
Q Consensus 541 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (611)
+++++|.+++.+ +++.+.+|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2566777777764 2445556666555443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=198.43 Aligned_cols=241 Identities=18% Similarity=0.181 Sum_probs=175.4
Q ss_pred HHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 312 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 312 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
.....+|++++.|......+.. .-+.++ ...+.+.+.++|.+.+.+.-- +.+...+...+
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~----~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r 264 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLS----NSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVR 264 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcC----CCCcceeeccccchhcccccc-------------ccchhcccccc
Confidence 3556789999999999888775 122222 225888888998877654210 00111111222
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCC--------CchhHHHHHHHHHHCC
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--------KKPMEKQLEQLEILYP 456 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-------~~~~lvivG~g--------~~~~~~~l~~l~~~~~ 456 (611)
...+.. .....+..+.++++.||++++++++.++.. .+.+++++|+. ...+.+.+.++..++.
T Consensus 265 ~~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~ 342 (495)
T KOG0853|consen 265 LYRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD 342 (495)
T ss_pred eeeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC
Confidence 222322 224678889999999999999999998865 25788888832 1246777778887764
Q ss_pred ---CceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccccccccc
Q 007247 457 ---EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533 (611)
Q Consensus 457 ---~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~ 533 (611)
+.+.+....+......+++.+...+.....|+||++.+|||+||+|||+++.||..|+|.++.|||++
T Consensus 343 l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~--------- 413 (495)
T KOG0853|consen 343 LLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI--------- 413 (495)
T ss_pred ccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee---------
Confidence 33333344455444567788888777666699999999999999999999999999999999999987
Q ss_pred CCccCHH---HHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 534 VDPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 534 v~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+| +.+ .+|+++..+..+ ++.+.+|++++ +.+.|||+.+.+++.++.....
T Consensus 414 -dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 -DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred -CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 77 555 699999999998 77788888777 4677999999999988887554
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=178.56 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=96.9
Q ss_pred EEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHHHHHHHccEEEeC
Q 007247 407 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 483 (611)
Q Consensus 407 ~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~~aDv~l~p 483 (611)
|+|++.+.||++.+++++..+.+ ++++++++|.+.+...............++...+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432222111222334567777776 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEe
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 524 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~ 524 (611)
|..|++|++++|||++|+|+|+|+.++..|++.++++|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=194.49 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=157.6
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
...+|.+++.|+..++.+.+ .|++.+ ++.++.|+++..+..+. + +...+++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHH
Confidence 45799999999999999885 566544 77777776664332211 1 3456778
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+|++.+ ...++++.|++...||++.+++++.+. .+++++++++++.....+.+++.... .+++.+.+ |. +.++.+
T Consensus 196 ~~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHH
Confidence 888743 234566789999899999999986432 26789876654332333444433222 23465544 33 346689
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Cccc----ccceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
|+.||+++. ++.|++++|||++|+|+|+++ .+|. ...+.+.+.|+. ..|.++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999996 456899999999999999996 3431 123335555653 4699999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++++ ++.+.+|++++. ...++++.+++++++++..+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9987 778888888875 4679999999999998876654
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=193.74 Aligned_cols=290 Identities=16% Similarity=0.148 Sum_probs=204.0
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|-.||+|..++|.+|+... +++++-|..|.. ||... .+..+ | ...
T Consensus 134 d-~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~e---------ifr~L--------P----~r~ 180 (487)
T TIGR02398 134 A-TVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSAD---------VFNIL--------P----WRE 180 (487)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChH---------HHhhC--------C----chH
Confidence 6 99999999999999999875 689999999943 33221 11110 0 113
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----------------------h---hhccceeEeeCCcccC
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGMDVQ 360 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----------------------~---~~~~~i~vI~Ngvd~~ 360 (611)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + -+..++.++|.|+|++
T Consensus 181 ~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~ 260 (487)
T TIGR02398 181 QIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPE 260 (487)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHH
Confidence 3456788999999999999987765321 1211100 0 1223588999999998
Q ss_pred CcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEE
Q 007247 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQI 434 (611)
Q Consensus 361 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~l 434 (611)
.|.+.... ..-....+.++++++ ++++|++++|++..||+...++|++++.+ | ++.|
T Consensus 261 ~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~L 323 (487)
T TIGR02398 261 RIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTL 323 (487)
T ss_pred HHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEE
Confidence 88543210 001122445777776 45799999999999999999999999865 4 5799
Q ss_pred EEEeCCC-------chhHHHHHHHHHHCCC--------c-eEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHH
Q 007247 435 IVLGTGK-------KPMEKQLEQLEILYPE--------K-ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498 (611)
Q Consensus 435 vivG~g~-------~~~~~~l~~l~~~~~~--------~-v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma 498 (611)
+++|.+. .++.+++++++..... . +.+...++.+.+..+|+.||+++++|..||++++..|+|+
T Consensus 324 vqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva 403 (487)
T TIGR02398 324 VTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVA 403 (487)
T ss_pred EEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHh
Confidence 9999864 2355666666554211 1 2333445778888899999999999999999999999999
Q ss_pred cCC----ceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCch
Q 007247 499 YGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWK 573 (611)
Q Consensus 499 ~G~----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~ 573 (611)
|+. |+|.|..+|..+.+. .++++ +|.|++++|++|.++|+.+..++..++.+.. ....++..
T Consensus 404 ~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~ 470 (487)
T TIGR02398 404 AQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQ 470 (487)
T ss_pred hhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHH
Confidence 998 999999999887763 36765 9999999999999999985444433332221 23556655
Q ss_pred HHHHHHHH
Q 007247 574 GPAKKWEE 581 (611)
Q Consensus 574 ~~a~~~~~ 581 (611)
.-++.+++
T Consensus 471 ~W~~~fl~ 478 (487)
T TIGR02398 471 RWADEFLA 478 (487)
T ss_pred HHHHHHHH
Confidence 55555443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-17 Score=174.05 Aligned_cols=218 Identities=17% Similarity=0.125 Sum_probs=144.7
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
..+.+|.++++|+...+.+.. +|. ++.++.|.+.... .+.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~-~~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAI-PLLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhc-cccc-------------------ChHHHHH
Confidence 466889999999998887764 332 2334444432211 1100 1445677
Q ss_pred HhCCCCCCCCcEE-EEEc-Ccccc-cCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC-CCceEEecccC
Q 007247 393 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 466 (611)
Q Consensus 393 ~~gl~~~~~~~~i-l~iG-rl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 466 (611)
+++++.+ .+++ ++.| |..+. ++.+.++++++.+.+ ++++++++|.+. ...+.++++..++ +.++.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888643 3554 4445 44444 457899999998865 589999998632 2455566655554 323322 22
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-----------------CCcccccceecCc--ceEEeccc
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 527 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~l~~~~ 527 (611)
+.+..+|+.||+++.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++.
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 323 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQ--- 323 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcC---
Confidence 34567999999999987 88889999999999987 4566777777654 44543
Q ss_pred ccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007247 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 528 ~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+..|++++++.+.++++| ++.+.+|++++ ..+.. -...+++..+.+.+++
T Consensus 324 -------~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 324 -------EEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred -------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 778999999999999998 77777777775 23333 3345666666665554
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-16 Score=167.16 Aligned_cols=186 Identities=16% Similarity=0.092 Sum_probs=134.8
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
..+++..++.+|.++++|+.+++.+.+ +|++.+ ++.++++..+.....+.
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~--------------------- 163 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELV--------------------- 163 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEeccccccccccccc---------------------
Confidence 356788899999999999999999986 565433 56555554332111000
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
. ..+..+.|+|+|++....++ .+ ..++++|+|+|+|+... ...+++.+.+.++
T Consensus 164 -----~-----~~~~~~~i~yaG~l~k~~~l---~~-----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 164 -----K-----TPSFQKKINFAGNLEKSPFL---KN-----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----c-----cccCCceEEEecChhhchHH---Hh-----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 0 01134689999999954321 11 23679999999997311 2345799999999
Q ss_pred hHHHHHHHHHccEEEeCCCC-----------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCC
Q 007247 467 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 535 (611)
.+.+..+++. |+.+++... -++|.++.|+|+||+|||+++.+++.|+|+++++|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 776665421 25789999999999999999999999999999999986 4
Q ss_pred ccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
+.+++++.|..+. ++.+.+|++++.
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~~ 310 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENVK 310 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHHH
Confidence 7889999998853 356677777763
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-17 Score=170.62 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=144.4
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
..+.+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 345789999999999999886 676654 899999985 5432221110 011123
Q ss_pred HHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC---CCceEEeccc
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 465 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 465 (611)
+.++++. +.+++++.||... .||++.++++++++.++++.+++.|.+. ..+.+++...++ .+++.+....
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 4566652 3456778999875 7999999999999865457776666554 444555554443 2456666544
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
....+..+++.||+++.+|- | ++.|||++|+|+|+++. +...+.+++|. ++. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 55667789999999999984 4 57999999999999975 44566665442 332 2247999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 582 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (611)
+|..++++ +..+..|. ...|.-...+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 54444443 2334434455555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.7e-17 Score=173.10 Aligned_cols=444 Identities=19% Similarity=0.239 Sum_probs=226.6
Q ss_pred eeeecCccccccHHHHhccchHHHHh-CCCeEEEEeecCCcccc----cCCC-ceEEEE---EeCCeeeEEEEEEeeecC
Q 007247 91 GTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYKD----AWDT-DVVIEL---KVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 91 ~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~~----~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g 161 (611)
++|... +.||+=+|+..=|+.+++ .|-+..+|.|...+... ..+. ...+.. ......-.+++-+..+.|
T Consensus 3 sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~G 80 (633)
T PF05693_consen 3 SWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIPG 80 (633)
T ss_dssp ETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESSTT
T ss_pred hhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeECC
Confidence 444433 789999999998888765 58899999886443210 0000 000000 000011345555666778
Q ss_pred ceEEE-EeCccch-------hhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEE
Q 007247 162 VDRVF-VDHPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233 (611)
Q Consensus 162 v~~~~-i~~~~~~-------~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh 233 (611)
.+++. +|...++ ..+|...+ +=++..+.||.+ ..-|.+.+...++.+...... ++.||.|
T Consensus 81 ~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~dyne-a~~Fgyava~fi~~f~~~~~~---------~~~ViaH 148 (633)
T PF05693_consen 81 RPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGDYNE-AVMFGYAVAWFIEEFYKFYEE---------KPKVIAH 148 (633)
T ss_dssp --EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HHHHH-HHHHHHHHHHHHHHHHHH-S----------SEEEEEE
T ss_pred cCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcchhH-HHHHHHHHHHHHHHHHHhhcC---------CCcEEEE
Confidence 77664 4544333 23553322 112222222221 123333333333333322211 4788999
Q ss_pred ecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCC---CCCCCCcchhHh
Q 007247 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY---NKPVRGRKINWM 310 (611)
Q Consensus 234 ~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 310 (611)
+|+|+++...++++... ..+..|||.|.... ||+-- +-...++..+...++- .+.-...+...+
T Consensus 149 fHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~------~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iE 215 (633)
T PF05693_consen 149 FHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLA------ANNKDFYNNLDKFNGDQEAGERNIYHKHSIE 215 (633)
T ss_dssp EESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHT------TTSS-TTTSGTTS-HHHHHHHTT-HHHHHHH
T ss_pred echHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhh------cCCCcHHHHhhccCccccccCccchHHHHHH
Confidence 99999999888888765 68999999997654 43200 0011111111111110 000011245667
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+.+...||.+.|||+-.+.+... ++.+..=.|+|||++...+...... ..-+...++.+
T Consensus 216 raaA~~AdvFTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~ef-----------qnl~~~~k~ki 274 (633)
T PF05693_consen 216 RAAAHYADVFTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHEF-----------QNLHAKAKEKI 274 (633)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTHH-----------HHHHHHHHHHH
T ss_pred HHHHHhcCeeeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchHH-----------HHHHHHHHHHH
Confidence 88889999999999999888663 1222233678999998877543210 01111223332
Q ss_pred ----HHH-hC-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCCC------------
Q 007247 391 ----QAE-VG-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGK------------ 441 (611)
Q Consensus 391 ----~~~-~g-l~~~~-~~~~il~iGrl~-~~Kg~d~li~a~~~l~~------~~---~~lvivG~g~------------ 441 (611)
+.. +| +.-+. +...|..+||.+ .+||+|.+|+|+.+|.. .+ +-|+|+=...
T Consensus 275 ~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a 354 (633)
T PF05693_consen 275 HEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQA 354 (633)
T ss_dssp HHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHH
T ss_pred HHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHH
Confidence 322 23 22222 345677789998 69999999999998843 12 3344443321
Q ss_pred --chhHH-------------------------------------------------------------------HHHHHH
Q 007247 442 --KPMEK-------------------------------------------------------------------QLEQLE 452 (611)
Q Consensus 442 --~~~~~-------------------------------------------------------------------~l~~l~ 452 (611)
+.+.+ .++++.
T Consensus 355 ~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~ 434 (633)
T PF05693_consen 355 VTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLG 434 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCC
Confidence 00000 111111
Q ss_pred HH----CCCceEEecccC-------hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec----
Q 007247 453 IL----YPEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---- 517 (611)
Q Consensus 453 ~~----~~~~v~~~~~~~-------~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---- 517 (611)
.. ...++.++..|. .-...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+...+.+
T Consensus 435 L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~ 514 (633)
T PF05693_consen 435 LFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIED 514 (633)
T ss_dssp ----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-H
T ss_pred CCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhcc
Confidence 00 011344444331 112346999999999999999999999999999999999999887765553
Q ss_pred -CcceEEecccccccccCCccCHHHHHHHHHHHHHhc---CHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007247 518 -GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 518 -g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
...|+.+-.. ...+.++.++.|.+.+.++ ...++..+..++ +++.++|+.....|.+.|+.++..
T Consensus 515 ~~~~GV~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 515 PEEYGVYVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HGGGTEEEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred CcCCcEEEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 3456654111 2344566666666555543 123333333333 468999999999999999987753
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-16 Score=169.88 Aligned_cols=198 Identities=20% Similarity=0.161 Sum_probs=139.6
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+.. .....+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHhc
Confidence 589999999999999986 577655 899999996 432221110 0023345555
Q ss_pred CCCCCCCCcEEEEEc-Ccc-cccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 395 GLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 395 gl~~~~~~~~il~iG-rl~-~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
+. +.+++++.+ |.+ ..||++.+++|+.++.+ ++++++++|.+.....+.+.+.. ...+++.+.........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 52 224555555 543 45899999999999864 58899988765433333333322 23345777766666666
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..+++.||+++.+| |..++|||+||+|+|++ +.|+..+++.++ +++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHH
Confidence 67999999999887 56789999999999996 678888888766 45543 47999999999999
Q ss_pred HHhcCHHHHHHHHHH
Q 007247 550 LATYGTQALAEMMKN 564 (611)
Q Consensus 550 l~~~~~~~~~~~~~~ 564 (611)
+++ ++.+.+++.+
T Consensus 332 l~~--~~~~~~~~~~ 344 (365)
T TIGR00236 332 LTD--PDEYKKMSNA 344 (365)
T ss_pred HhC--hHHHHHhhhc
Confidence 987 6666666554
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=182.70 Aligned_cols=296 Identities=17% Similarity=0.235 Sum_probs=199.1
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|.+||+|..++|.+++... +++++-|.+|.. ||... ++..+ | ...
T Consensus 233 D-~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~E---------ifr~L--------P----~r~ 279 (934)
T PLN03064 233 D-VVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSE---------IHRTL--------P----SRS 279 (934)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChH---------HHhhC--------C----cHH
Confidence 6 99999999999999999875 789999999943 33211 11111 0 112
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCccc--chhh---hccceeEeeCCcccCCcCCCCccccccccCcchhhh
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 381 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~ 381 (611)
-+-.++..||.|-+.+..++..+.+.+. .|.+. ..+. +..++.++|-|||+..|...... .
T Consensus 280 elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~ 347 (934)
T PLN03064 280 ELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------P 347 (934)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------h
Confidence 3456788999999999999988775321 12211 1110 12356778999998877533110 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeC-----CCc--hhHHHH
Q 007247 382 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GKK--PMEKQL 448 (611)
Q Consensus 382 ~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~-----g~~--~~~~~l 448 (611)
.-....+.+++.++ ++.+|+.++|++..||+...++|++++.+ |+ +.|+-+.. ++. .+..++
T Consensus 348 ~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V 422 (934)
T PLN03064 348 QVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQV 422 (934)
T ss_pred hHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHH
Confidence 00112345666654 45699999999999999999999999765 44 34443332 221 233344
Q ss_pred HHHHHH----CCC----ceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCcccccce
Q 007247 449 EQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTV 515 (611)
Q Consensus 449 ~~l~~~----~~~----~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e~v 515 (611)
.++... ++. -+.+.. .++.+.+..+|+.||++++||..||++++.+|||+|+. ++|.|...|..+.+
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 444332 321 022221 24667777899999999999999999999999999954 45558888888877
Q ss_pred ecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007247 516 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 516 ~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+..++++ +|.|.+++|++|.++|... ++++.+..+.. ....+||...++.+++-+....
T Consensus 503 --~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 503 --GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred --CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 3347776 9999999999999999852 33333333333 3577999999998887776654
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=156.50 Aligned_cols=223 Identities=28% Similarity=0.449 Sum_probs=168.9
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
..+.+++.++.....+.. ... ..++..++|+++...+.+. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 478899999987665553 111 1157889999998776542 011
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (611)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..++. .++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 4899999999753 233333444432 457776666645666
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.||++++||.+|++|++++|||++|+|||+++.++..+++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999988778854 66689999999999998
Q ss_pred hcCHHHHHHHHH---HHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 552 ~~~~~~~~~~~~---~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ .+.+..+.. +.....|+|+..++++.+++.....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8 344444443 2234799999999999999988754
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-14 Score=144.32 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=168.3
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
..+|.+++.|.+....+.+. ++. ..+.+|+...+++.+ .+..
T Consensus 221 ~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l----------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL----------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------HHHh
Confidence 37899999999999888763 222 156777766665432 2223
Q ss_pred CCCCCCCCcEEEEEcCcccccCHH-HHHHHHHhccc------CCcEEEEEeCCC----chhHHHHHHHHHHC--CCceEE
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEKARG 461 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d-~li~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~v~~ 461 (611)
+. .+.+.+.++++|.+.|+|++. +-++|+-.... .+++|+|+|+-. .+..+.++.++.++ ++++.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 32 334568899999999999999 33444444333 479999999843 24555666666654 467888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc-cccceec---CcceEEecccccccccCCcc
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE---GFTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~---g~~G~l~~~~~~~~~~v~~~ 537 (611)
....+-+.+-.++..|.+.+..-..|.||+.+.|+||+|+-+|+.+.|| .-|+|.+ ..+||+. .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 8777888888999999999999999999999999999999999999877 4566664 4679974 6
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHc
Q 007247 538 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 538 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+.++.|+++..++.. +.+.+..|++++. ..+|+-....+.|...+..++.+
T Consensus 410 t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 788999999999987 3455667777665 47899999999999888888753
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-14 Score=139.10 Aligned_cols=302 Identities=17% Similarity=0.183 Sum_probs=190.6
Q ss_pred CCCeEEEecCCcc--chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCC
Q 007247 227 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (611)
Q Consensus 227 ~~Dvivh~hd~~~--~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
.+| +|..++... .++.+++.... .++|.+++.||..|.-. + .+.-|...++..
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ysl~--------l----------~~~~g~~h~lV~ 157 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYSLQ--------L----------KLKLGFQHPLVR 157 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHHHH--------H----------HhhcCCCCchHH
Confidence 589 677766554 44555555443 69999999999877200 0 011222223332
Q ss_pred cchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcc-----cCC----cCCCCccccccccC
Q 007247 305 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD-----VQE----WNPLTDKYIGVKYD 375 (611)
Q Consensus 305 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd-----~~~----~~p~~~~~~~~~~~ 375 (611)
-....++..-+.||.-+||++.+++++.+. +|+. +..+++.--. .++ |.+.... ...|-
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d--~~~f~ 225 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGD--HSPFR 225 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhccc--cchhh
Confidence 333344555668999999999999999863 5643 4445543111 000 1111000 00010
Q ss_pred cchhhhccHHHHHHHHHHhC---CCCCCCC-cEEEEEcCcccccCHHHHHHHHHhcc-----c----CCcEEEEEeCCCc
Q 007247 376 ASTVMDAKPLLKEALQAEVG---LPVDRNI-PVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTGKK 442 (611)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~g---l~~~~~~-~~il~iGrl~~~Kg~d~li~a~~~l~-----~----~~~~lvivG~g~~ 442 (611)
+- ..+.+..+..++-++.. ..-.++. .+++..-..++..++.+|++|+...- + |.+-++|.|.|+
T Consensus 226 ar-~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP- 303 (444)
T KOG2941|consen 226 AR-EPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP- 303 (444)
T ss_pred hc-ccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-
Confidence 11 22334444444444433 0001122 46777778999999999999998431 1 578888899888
Q ss_pred hhHHHHHHHHHHCC-CceEEec-ccChHHHHHHHHHccEEEeC--CCC-CCCcHHHHHHHHcCCceEEcCCcccccceec
Q 007247 443 PMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILIP--SRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517 (611)
Q Consensus 443 ~~~~~l~~l~~~~~-~~v~~~~-~~~~~~~~~i~~~aDv~l~p--S~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 517 (611)
..+...+...+++ .++.... ....++.+.+++.||+.|+- |.. =-.|+++++..-||+||++-+...+.|+|++
T Consensus 304 -lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh 382 (444)
T KOG2941|consen 304 -LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH 382 (444)
T ss_pred -hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc
Confidence 3333333333322 3454443 44777888999999987654 433 2479999999999999999999999999999
Q ss_pred CcceEEecccccccccCCccCHHHHHHHHHHHHHhcC--HHHHHHHHHHHH-HhhCCchHHHHHHH
Q 007247 518 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKWE 580 (611)
Q Consensus 518 g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~--~~~~~~~~~~~~-~~~fsw~~~a~~~~ 580 (611)
++||++| +|.+++++.+..+.++.. ...+.+..++.+ .+...|+..-++..
T Consensus 383 ~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 383 GENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred CCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhh
Confidence 9999998 899999999999999753 356666666665 36677876655543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-15 Score=135.02 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=94.5
Q ss_pred CcEEEEEcCcccccCHHHHHH-HHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 402 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~-a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
.++|+++|++.+.||++.+++ +++++.+ ++++|+|+|.+++ .++++ .. .++.+++.. +.+.+++++||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999875 7899999999875 24444 22 358888777 45778999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+++.|+. .|+++.+++|||++|+|||+++. +..+++.....|.+ -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999996 58899999999999999999999 67777765666765 378999999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-12 Score=138.43 Aligned_cols=190 Identities=16% Similarity=0.092 Sum_probs=119.6
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+...+.+|+|++.++...+.+.. +|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 34566899999999998887764 232 445566665222111001 14456
Q ss_pred HHHhCCCCCCCCcEEEEE--cCccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEec
Q 007247 391 QAEVGLPVDRNIPVIGFI--GRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 463 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~i--Grl~~-~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~ 463 (611)
++++|++. +.++|++. +|..+ .|++..++++++.+.+ +++++++.+.... ..+.++++...+. .++...
T Consensus 182 r~~lgl~~--~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDH--NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 77888864 44666654 37777 7999999999999865 5788877654321 3344555444432 233322
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Ccccc----------------cceecCcceEEecc
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----------------DTVEEGFTGFQMGS 526 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----------------e~v~~g~~G~l~~~ 526 (611)
..+ ...+|+.||++|.+| |.+.+|+|++|+|+|+.. .+.+. .++.+. +..
T Consensus 258 --~~~-~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~--~~~--- 324 (385)
T TIGR00215 258 --DGD-ARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR--LLV--- 324 (385)
T ss_pred --Cch-HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC--ccc---
Confidence 222 346999999999999 788889999999988873 22222 122211 110
Q ss_pred cccccccC-CccCHHHHHHHHHHHHHh
Q 007247 527 FSVDCEAV-DPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 527 ~~~~~~~v-~~~d~~~la~~i~~ll~~ 552 (611)
.++. +.-+++.+++.+.++++|
T Consensus 325 ----pel~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 325 ----PELLQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred ----hhhcCCCCCHHHHHHHHHHHhcC
Confidence 0111 445789999999999987
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-12 Score=140.07 Aligned_cols=296 Identities=15% Similarity=0.141 Sum_probs=198.7
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|-.||+|..++|.+++... ++.++-|..|-. ||..+ ++..+ | ..
T Consensus 124 ~D-~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiP-----FPs~e---------ifr~L--------P----~r 170 (474)
T PRK10117 124 DD-IIWIHDYHLLPFASELRKRG------VNNRIGFFLHIP-----FPTPE---------IFNAL--------P----PH 170 (474)
T ss_pred CC-EEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCC-----CCChH---------HHhhC--------C----Ch
Confidence 36 99999999999999999875 789999999943 33221 11110 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccc--hhh----hccceeEeeCCcccCCcCCCCccccccccCcchh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (611)
.-+-.++..+|.|-+.+..+++.+.+... .|.+.. ..+ +..++.+.|-|+|++.|......
T Consensus 171 ~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~----------- 239 (474)
T PRK10117 171 DELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG----------- 239 (474)
T ss_pred HHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc-----------
Confidence 33456788999999999999987775221 122110 001 22357778888888776432110
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----c---hhHH
Q 007247 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PMEK 446 (611)
Q Consensus 380 ~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~---~~~~ 446 (611)
........+++.++ ++.+|+-+.|++..||+..=++|++++.+ .++.|+-+.... + ++..
T Consensus 240 --~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 240 --PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred --hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHH
Confidence 00112344565554 45689999999999999999999999876 378888776643 1 3445
Q ss_pred HHHHHHHH----CCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCcccc
Q 007247 447 QLEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLV 512 (611)
Q Consensus 447 ~l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~ 512 (611)
+++++... ++. -+.+. -.++.+.+..+|+.||+++++|..+|+.++..|+.+|.. +.|.|...|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA 392 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchH
Confidence 55554443 321 12211 124666777899999999999999999999999999965 37888877777
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+.+.+ .++ |+|.|.+++|++|.++|+.+..++..++..-. ....++...-++.+++-+..+.
T Consensus 393 ~~L~~---All----------VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 393 NELTS---ALI----------VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHhCC---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 77742 344 49999999999999999985434433332221 2466777777777776666553
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=144.55 Aligned_cols=162 Identities=13% Similarity=0.078 Sum_probs=133.2
Q ss_pred cEEEEEc--CcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc-hhHHHHHHHHHHCC---------------------
Q 007247 403 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYP--------------------- 456 (611)
Q Consensus 403 ~~il~iG--rl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~~--------------------- 456 (611)
..+++++ |+ +.|.++.+|+++.++.. |+++|.+.|.+.. ++.+.++++..++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4688888 99 99999999999999954 8999999999873 34455544433221
Q ss_pred ----------CceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecc
Q 007247 457 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 526 (611)
Q Consensus 457 ----------~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~ 526 (611)
..+.+.+..+...+...+..+.++|.+|..|+++ .++||++.|+|+| .-|..++|.+++||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 2344443334445668999999999999999999 9999999999999 55679999999999986
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 583 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (611)
+|.++|+++|..+|.+ +..+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999998 888888888875 59999999999998864
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.1e-12 Score=135.79 Aligned_cols=295 Identities=18% Similarity=0.207 Sum_probs=167.0
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +++++.|..|.. ||.. +.+..+. ..
T Consensus 142 ~D-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~---------e~fr~lP------------~r 188 (474)
T PF00982_consen 142 GD-LVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSS---------EIFRCLP------------WR 188 (474)
T ss_dssp T--EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------H---------HHHTTST------------TH
T ss_pred CC-EEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCH---------HHHhhCC------------cH
Confidence 46 99999999999999999876 789999999943 3221 1111110 12
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCc--CCCcccchh-------hhccceeEeeCCcccCCcCCCCccccccccCcch
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI-------IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~~-------~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 378 (611)
..+-.++..||.|-+.+..+++.+.+.. ..|++...- -+..++.+.|-|+|++.+......
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~---------- 258 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS---------- 258 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC----------
Confidence 3445678899999999999998876532 122221110 012346667777777655311000
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----c---hhH
Q 007247 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 445 (611)
Q Consensus 379 ~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~---~~~ 445 (611)
..-....+.+++.++- +..+|+-+.|++..||+..=++|++++.+ .++.|+-++... + ++.
T Consensus 259 --~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 259 --PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred --hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 0001123456666641 24799999999999999999999999976 378888777643 1 233
Q ss_pred HHHHHHHH----HCCC----ceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccc
Q 007247 446 KQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 512 (611)
Q Consensus 446 ~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 512 (611)
++++++.. +++. -+.++- ..+.+.+-.+|+.||+++++|..+|..++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 44444433 3432 133332 346677778999999999999999999999999999765 7888888888
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~~ 583 (611)
+.+.++. +++ +|.|.+++|++|.++|+.+..++...+.+.. ....++...-++.+++-+
T Consensus 413 ~~L~~~a--l~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 413 EQLSEAA--LLV----------NPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHcCCcc--EEE----------CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 8886542 544 9999999999999999984333333222211 245666665555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.5e-12 Score=119.91 Aligned_cols=176 Identities=23% Similarity=0.291 Sum_probs=92.4
Q ss_pred EEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007247 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (611)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (611)
|+++... .+. .||++.++.+|+++|+++||+|+++++......... ... ..
T Consensus 1 ili~~~~-~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------------~~~-----------~~ 51 (177)
T PF13439_consen 1 ILITNIF-LPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------------LVK-----------IF 51 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------------EEE-----------E-
T ss_pred CEEEEec-CCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------------ccc-----------ee
Confidence 4555554 453 899999999999999999999999998754332210 000 00
Q ss_pred EeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHH
Q 007247 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYL 246 (611)
Q Consensus 167 i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l 246 (611)
...+.. ......+.......+.+.++.. +|| |||+|.+.........
T Consensus 52 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~ 98 (177)
T PF13439_consen 52 VKIPYP--------------------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLA 98 (177)
T ss_dssp --TT-S--------------------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHH
T ss_pred eeeecc--------------------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHh
Confidence 000000 0011112222334444444443 599 8899987765544333
Q ss_pred HHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHH
Q 007247 247 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326 (611)
Q Consensus 247 ~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 326 (611)
.. ++|+++++|+......+ ...... +.......+++...+.+|.++++|+.
T Consensus 99 ~~---------~~~~v~~~H~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~~ii~vS~~ 149 (177)
T PF13439_consen 99 CR---------KVPIVYTIHGPYFERRF-------LKSKLS-------------PYSYLNFRIERKLYKKADRIIAVSES 149 (177)
T ss_dssp HH---------CSCEEEEE-HHH--HHT-------TTTSCC-------------CHHHHHHCTTHHHHCCSSEEEESSHH
T ss_pred cc---------CCCEEEEeCCCcccccc-------cccccc-------------hhhhhhhhhhhhHHhcCCEEEEECHH
Confidence 32 68999999975531000 000000 00001122234456789999999999
Q ss_pred HHHHHHcCcCCCcccchhhhccceeEeeCCcccCCc
Q 007247 327 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 362 (611)
Q Consensus 327 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~ 362 (611)
.++++.+ +|++.+ ++.+|+||+|.+.|
T Consensus 150 ~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 150 TKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 9999996 565544 89999999999876
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.5e-11 Score=136.02 Aligned_cols=298 Identities=14% Similarity=0.175 Sum_probs=195.3
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|..||+|..++|.+|+... +++++.|..|.. ||... .+..+. ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e---------ifr~LP------------~r~ 249 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSSE---------IYKTLP------------IRE 249 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCChH---------HHhhCC------------cHH
Confidence 7 99999999999999999875 789999999943 33211 111110 112
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----hh----hccceeEeeCCcccCCcCCCCccccccccCcc
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~ 377 (611)
-+-.++..||.|-+.+..+++.+.+... .|++.+. -+ |..++.+.|-|+|...|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 3456788999999999999988776321 2222111 00 33456777888887766322110
Q ss_pred hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCC----c---hh
Q 007247 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PM 444 (611)
Q Consensus 378 ~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~----~---~~ 444 (611)
..-.....+++++++- +++.+|+-+.|++..||+..=++|+++|.+ | ++.|+-+.... + ++
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 0001123345655542 245799999999999999999999999976 2 67787776543 1 23
Q ss_pred HHHHHHHH----HHCCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC--------------
Q 007247 445 EKQLEQLE----ILYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 501 (611)
Q Consensus 445 ~~~l~~l~----~~~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-------------- 501 (611)
...++++. .+++. -+.+. -.++.+.+-.+|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 33344443 34431 13322 234656667899999999999999999999999999854
Q ss_pred -----ceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHH
Q 007247 502 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 575 (611)
Q Consensus 502 -----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~ 575 (611)
+.|.|...|....+. + -++ |.|.|.+++|++|.++|..+..++..++.+.. ....++....
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~-~--Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLS-G--AIR----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhC-c--CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 366676666555553 2 343 49999999999999999985444433332221 2456677777
Q ss_pred HHHHHHHHHHHH
Q 007247 576 AKKWEETLLNLE 587 (611)
Q Consensus 576 a~~~~~~~~~l~ 587 (611)
++.++.-++.+.
T Consensus 542 ~~~fl~~l~~~~ 553 (854)
T PLN02205 542 ARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHH
Confidence 777666665553
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.2e-12 Score=117.30 Aligned_cols=159 Identities=23% Similarity=0.239 Sum_probs=84.9
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCC
Q 007247 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (611)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~ 180 (611)
||++.++.+|+++|+++||+|+++++..+...+. ....|+.++.+..+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999875443221 1134556555533211100
Q ss_pred CccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCce
Q 007247 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260 (611)
Q Consensus 181 ~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k 260 (611)
.... + +...+..++.... .+|| +||+|++..++++..++.. .++|
T Consensus 54 -------------~~~~-~---~~~~~~~~l~~~~----------~~~D-vv~~~~~~~~~~~~~~~~~-------~~~p 98 (160)
T PF13579_consen 54 -------------LRLL-R---FLRRLRRLLAARR----------ERPD-VVHAHSPTAGLVAALARRR-------RGIP 98 (160)
T ss_dssp -------------GGHC-C---HHHHHHHHCHHCT-------------S-EEEEEHHHHHHHHHHHHHH-------HT--
T ss_pred -------------hhhH-H---HHHHHHHHHhhhc----------cCCe-EEEecccchhHHHHHHHHc-------cCCc
Confidence 0001 1 1122222221111 2699 9999997766666666634 4899
Q ss_pred EEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCc-chhHhHHHhhhccEEEecCHHHHHHHHcCcCCCc
Q 007247 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 339 (611)
Q Consensus 261 ~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 339 (611)
+|+++|+...... ..+ ..+ ...+++..+..+|.++++|+..++.+.+ +|+
T Consensus 99 ~v~~~h~~~~~~~------------~~~--------------~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 99 LVVTVHGTLFRRG------------SRW--------------KRRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp EEEE-SS-T------------------H--------------HHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred EEEEECCCchhhc------------cch--------------hhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 9999996432110 000 001 1234567888999999999999999996 666
Q ss_pred ccchhhhccceeEeeCC
Q 007247 340 ELDNIIRKTGIKGIVNG 356 (611)
Q Consensus 340 ~~~~~~~~~~i~vI~Ng 356 (611)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 655 99999998
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-09 Score=116.98 Aligned_cols=294 Identities=17% Similarity=0.222 Sum_probs=190.2
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +..++.|.+|-.. |.. +.++++. ..
T Consensus 148 gD-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPf-----Pss---------Evfr~lP------------~r 194 (486)
T COG0380 148 GD-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPF-----PSS---------EVFRCLP------------WR 194 (486)
T ss_pred CC-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCCC-----CCH---------HHHhhCc------------hH
Confidence 47 99999999999999999886 7889999999433 321 1211111 01
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCC--C------cccchh-hhccceeEeeCCcccCCcCCCCccccccccCcch
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDK--G------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~--g------~~~~~~-~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 378 (611)
.-+-.++..||.|-+.++.+++.+.+.... + +..+.. -+..++..+|-|+|+..|.-.... +..
T Consensus 195 ~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-------~~v 267 (486)
T COG0380 195 EEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-------PSV 267 (486)
T ss_pred HHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------Cch
Confidence 223457789999999999999877653211 1 110000 011256667888988776432110 000
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----ch---hH
Q 007247 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP---ME 445 (611)
Q Consensus 379 ~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~---~~ 445 (611)
.....++++.++- ++.+|+.+.|++.-||+..=+.|+++|.+ .++.++-++... .. +.
T Consensus 268 -----~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~ 338 (486)
T COG0380 268 -----QEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALR 338 (486)
T ss_pred -----hhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHH
Confidence 0123345555442 36789999999999999999999999985 378888888764 12 34
Q ss_pred HHHHHHHH----HCCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCcccc
Q 007247 446 KQLEQLEI----LYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLV 512 (611)
Q Consensus 446 ~~l~~l~~----~~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~ 512 (611)
.+++++.. +++. -+.++ -..+.+++..++..||+++++|..||+.++..|+.+|-- |.|.|...|..
T Consensus 339 ~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 339 LQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 44444443 3331 12222 124667777899999999999999999999999999843 67777766666
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
..+.+ -+++ .|.|.+++|++|.++|+.+..++...+ +..+ ...++....+..+++-+.
T Consensus 419 ~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~r~-~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 419 SELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKERH-EKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred hhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 66654 3544 999999999999999998432222222 2221 244555555555444433
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-10 Score=128.45 Aligned_cols=411 Identities=20% Similarity=0.241 Sum_probs=254.1
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEeecCCcc--------------cccCCC------------ce--EEEEEeCC
Q 007247 96 PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY--------------KDAWDT------------DV--VIELKVGD 147 (611)
Q Consensus 96 P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~--------------~~~~~~------------~~--~~~~~~~~ 147 (611)
|-. .||+|+........++..|.-.+.+..+|.+. .+.|.. .. ...+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 543 49999999999999999999999998876531 111211 01 22333333
Q ss_pred -eeeEEEEEEeeecCceEEEEeCccchhhhcCCC-CccccCCCCCCCCcchHHHH---HHHHHHHHHhhHHh-ccCCCCC
Q 007247 148 -KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT-QSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRIL-NLNSNKY 221 (611)
Q Consensus 148 -~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~-~~~iy~~~~~~~~~~~~~r~---~~~~~~~~~~~~~l-~~~~~~~ 221 (611)
....+|.+......+++++.+...--.+.|.+. -..+|+..+ +.+|+ .+|+.+.++.+..+ ....
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~~--- 260 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLEH--- 260 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhcc---
Confidence 456667776666566777765432111111111 125665432 34454 45666667666655 1110
Q ss_pred CCCCCCCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCcccccc
Q 007247 222 FSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFKSS 291 (611)
Q Consensus 222 ~~~~~~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~~~~ 291 (611)
+...+. +.|.||-|.+++.. .++.....+|+ ....-++||.|...+.+ .|+...+..+- |..+.--
T Consensus 261 --~~~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~l-pr~~~ii 336 (750)
T COG0058 261 --HDLDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLL-PRHLQII 336 (750)
T ss_pred --ccccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHh-hhhhhhH
Confidence 011234 77899988866544 34423322222 12357899999886655 35544442211 1000000
Q ss_pred c----ccccCC-----------CCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccceeEe
Q 007247 292 F----DFIDGY-----------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGI 353 (611)
Q Consensus 292 ~----~~~~~~-----------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI 353 (611)
. .|.... ..+... +++--.++..|..+..||.-+.+.++... .+++. +.+|.-+
T Consensus 337 ~~in~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nv 408 (750)
T COG0058 337 YEINARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNV 408 (750)
T ss_pred HHHHhhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccc
Confidence 0 000000 000000 34444567788889999998887765421 12222 4488899
Q ss_pred eCCcccCCcCCCCccccccccCcc--------------------------hhhhccHHHH----HHHHHHhCCCCCCCCc
Q 007247 354 VNGMDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLK----EALQAEVGLPVDRNIP 403 (611)
Q Consensus 354 ~Ngvd~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~----~~~~~~~gl~~~~~~~ 403 (611)
.||+....|-....+.+...|+.. -+...|...+ +.+..+.|+..+++..
T Consensus 409 TNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~l 488 (750)
T COG0058 409 TNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNAL 488 (750)
T ss_pred cCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcc
Confidence 999999988655444444444433 1122233333 3344567888888999
Q ss_pred EEEEEcCcccccCHHHHHHHHHhc----cc---CCcEEEEEeCCCc------hhHHHHHHHHHHC--CCceEEecccChH
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHF----IK---ENVQIIVLGTGKK------PMEKQLEQLEILY--PEKARGVAKFNIP 468 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l----~~---~~~~lvivG~g~~------~~~~~l~~l~~~~--~~~v~~~~~~~~~ 468 (611)
+++++-|+.++|...+.+.-+..+ ++ +.+++++.|...+ .+.+.+...+... ..+|.++..++..
T Consensus 489 fd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvs 568 (750)
T COG0058 489 FDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVS 568 (750)
T ss_pred eeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChh
Confidence 999999999999988876554444 32 4688888888653 3444444444432 2468899999999
Q ss_pred HHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCccccccee--cCcceEEecccc
Q 007247 469 LAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFS 528 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~ 528 (611)
.+..++.+||+....|.. |.+|..-+-+|..|.+.|+|-.|..+|+.+ .+.|||+||...
T Consensus 569 lA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 569 LAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred HHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 999999999999998875 999999999999999999999999999997 789999998554
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-08 Score=107.90 Aligned_cols=167 Identities=16% Similarity=0.157 Sum_probs=96.3
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH-HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~-d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
..++.++++. ++++|+.+|.=.-.+.+ +.+.+++..+. ++++++++ .|..++++.+.. +. ++.. ..|..
T Consensus 174 ~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~-~G~~~~~~~~~~----~~-~~~~-~~f~~ 243 (352)
T PRK12446 174 KGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHL-CGKGNLDDSLQN----KE-GYRQ-FEYVH 243 (352)
T ss_pred HHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEE-eCCchHHHHHhh----cC-CcEE-ecchh
Confidence 4455677653 45666666553334445 44445555553 34776553 233334444332 12 2222 24443
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-----c----cccceecCcceEEecccccccccCCccC
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~l~~~~~~~~~~v~~~d 538 (611)
+.++.+|+.||++|.- +-+.++.|++++|+|.|.-... + ..+.+.+.+.+..+ .-+.-+
T Consensus 244 ~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~~~ 311 (352)
T PRK12446 244 GELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEEDVT 311 (352)
T ss_pred hhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhcCC
Confidence 4566799999988843 3478999999999999887532 1 12233344455543 012336
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
++.+.+++.++++| ++.+.+ ....+.....++++.++++
T Consensus 312 ~~~l~~~l~~ll~~--~~~~~~-----~~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 312 VNSLIKHVEELSHN--NEKYKT-----ALKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred HHHHHHHHHHHHcC--HHHHHH-----HHHHcCCCCHHHHHHHHHH
Confidence 78999999999877 544432 2234666666766666554
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-09 Score=119.38 Aligned_cols=290 Identities=18% Similarity=0.209 Sum_probs=186.6
Q ss_pred CeEEEecCCccchHHHH-HHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCc----------cc
Q 007247 229 DVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QF 288 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~-l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~----------~~ 288 (611)
.++||.||-|++++..- ++......|+ .....++||.|...+.+ .|+.+.+..+- |+ .+
T Consensus 314 ~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~l-pr~l~Ii~eIn~~f 392 (815)
T PRK14986 314 KIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKIL-PRHLQIIFEINDYF 392 (815)
T ss_pred ccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHc-cHhhhHHHHHHHHH
Confidence 44999999888665444 4333222111 13457899999886644 46655543321 11 11
Q ss_pred cccc--cccc-----CCC---CCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccceeEeeC
Q 007247 289 KSSF--DFID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVN 355 (611)
Q Consensus 289 ~~~~--~~~~-----~~~---~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~N 355 (611)
...+ .+.. +.. ..-.+..+++-..++..|..+-.||.-..+.+.+.. .+..- +.++.-|.|
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~------P~kf~niTN 466 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIF------PGRFCNVTN 466 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhC------CCcccccCC
Confidence 1000 0000 000 000012355566677788889999988777653211 11122 236777999
Q ss_pred CcccCCcC----CCCcc----ccccc-------------c-Ccch----hhhccHHHHH----HHHHHhCCCCCCCCcEE
Q 007247 356 GMDVQEWN----PLTDK----YIGVK-------------Y-DAST----VMDAKPLLKE----ALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 356 gvd~~~~~----p~~~~----~~~~~-------------~-~~~~----~~~~~~~~~~----~~~~~~gl~~~~~~~~i 405 (611)
|++...|- |.-.. ++... + +..+ +.+.|...|. .++++.|+..+++...+
T Consensus 467 GV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd 546 (815)
T PRK14986 467 GVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFD 546 (815)
T ss_pred CCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCccccee
Confidence 99998885 22111 11101 1 1111 2233333333 35567799889999999
Q ss_pred EEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHH------HCCC--ceEE
Q 007247 406 GFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARG 461 (611)
Q Consensus 406 l~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~------~~~~--~v~~ 461 (611)
+++-|+.++|...+ ++..+.++ ++ + +.++++.|...+ .+-+.+-.++. ...+ ++.+
T Consensus 547 ~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVF 626 (815)
T PRK14986 547 VQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVF 626 (815)
T ss_pred eeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEE
Confidence 99999999999999 66665444 33 2 688999998653 34445545554 2223 6888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+..++..++..++.+||+....|+. |.+|..=+-+|..|.+.+++-.|...|+.++ +.|||.||
T Consensus 627 lenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 627 IPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred eCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 9999999999999999999999874 9999999999999999999999999999987 88999995
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2e-10 Score=96.92 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=79.3
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHH
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 558 (611)
+.|.|++.++++..++|+|+||+|+|+++.+++.+++.++.+++.+ + |++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 3678999999999999999999999999999999999999899976 4 999999999999998 7777
Q ss_pred HHHHHHH---HHhhCCchHHHHHHHH
Q 007247 559 AEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 559 ~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
.++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 7777766 4689999999999863
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-09 Score=116.05 Aligned_cols=177 Identities=8% Similarity=0.022 Sum_probs=132.5
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
.+.|.||+.++...+.+.+.... ..++.+||-|+-.. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~-~~~---------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-F-KKD---------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-e-ccc----------------------------
Confidence 57899999998877777642211 12556666665321 1 110
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
++....++.++. +..|+++++|.+ |+++|.| |.+.. +...|.++ .+++ ++..+..+..+.+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112345666662 889999999866 8999999 77653 56888888 6674 577777877767779
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
++..||+++-.|..|++++++.||+..|+|+|+-+. -|..+++.+ |.++ +.+|+++|+++|..+|.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999884 456677766 6766 99999999999999999
Q ss_pred hcCHHHHHH
Q 007247 552 TYGTQALAE 560 (611)
Q Consensus 552 ~~~~~~~~~ 560 (611)
+ +..+.+
T Consensus 411 d--~~~~~~ 417 (438)
T TIGR02919 411 D--PNQFRE 417 (438)
T ss_pred C--HHHHHH
Confidence 8 544443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-07 Score=98.43 Aligned_cols=342 Identities=17% Similarity=0.148 Sum_probs=186.5
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCe-EEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
|+|++... -+||--.....++++|.++|++ |.++...+. .+ .+-....|+.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~e--------------------~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDG--LE--------------------AFLVKQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEeccccc--ce--------------------eeeccccCce
Confidence 45555553 2566666777799999999995 555532211 11 0111112556
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~ 243 (611)
++.++...+..+ . ...+......+++...++.+.+.. ++||+||-++.+.+.. +
T Consensus 53 ~~~I~~~~~~~~----------~------~~~~~~~~~~~~~~~~~a~~il~~---------~kPd~vig~Ggyvs~P-~ 106 (357)
T COG0707 53 FELIPSGGLRRK----------G------SLKLLKAPFKLLKGVLQARKILKK---------LKPDVVIGTGGYVSGP-V 106 (357)
T ss_pred EEEEeccccccc----------C------cHHHHHHHHHHHHHHHHHHHHHHH---------cCCCEEEecCCccccH-H
Confidence 666654433221 0 112333334556666665555543 4899666556555543 3
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
.+.... .++|++++..|... | ..+ +.....++.|.+.
T Consensus 107 ~~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~an---k~~~~~a~~V~~~ 143 (357)
T COG0707 107 GIAAKL-------LGIPVIIHEQNAVP-G--------------------------------LAN---KILSKFAKKVASA 143 (357)
T ss_pred HHHHHh-------CCCCEEEEecCCCc-c--------------------------------hhH---HHhHHhhceeeec
Confidence 333333 47999888776543 1 111 2234566776665
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
-+.. . -+.+ +.++.+.-|.+..+... .. ....+..... +++
T Consensus 144 f~~~----~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~~ 184 (357)
T COG0707 144 FPKL----E----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DKK 184 (357)
T ss_pred cccc----c----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CCc
Confidence 4431 1 1111 22566666666655443 11 1111111111 456
Q ss_pred EEEEEcC-cccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 404 VIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 404 ~il~iGr-l~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+.+|. ..-.+=-+.+.++...+.+ +++++...+.. .+++..+.+ .++.. .....|..+ +..+|+.||+++.
T Consensus 185 ~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~-~~~~~~~~~-~~~~~--~~v~~f~~d-m~~~~~~ADLvIs 258 (357)
T COG0707 185 TILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN-DLEELKSAY-NELGV--VRVLPFIDD-MAALLAAADLVIS 258 (357)
T ss_pred EEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-hHHHHHHHH-hhcCc--EEEeeHHhh-HHHHHHhccEEEe
Confidence 6666555 4444433444444555533 67776655333 233333333 23322 334455555 5579999999993
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCccc--------ccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHh
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 552 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 552 (611)
+ +=++++.|..++|+|.|.-..+.- ...+.+.+-+.++ +..+ ++.+.+.|.+++++
T Consensus 259 --R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 259 --R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLSN 324 (357)
T ss_pred --C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhcC
Confidence 3 346999999999999888764432 2233445556665 4444 89999999999998
Q ss_pred cCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 553 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
++.+.+|..++ +.+.-...++++.++....
T Consensus 325 --~~~l~~m~~~a--~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 325 --PEKLKAMAENA--KKLGKPDAAERIADLLLAL 354 (357)
T ss_pred --HHHHHHHHHHH--HhcCCCCHHHHHHHHHHHH
Confidence 78888887775 3444555566665555544
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.1e-09 Score=119.23 Aligned_cols=291 Identities=15% Similarity=0.181 Sum_probs=183.9
Q ss_pred CCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCcccc---c-cc
Q 007247 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK---S-SF 292 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~~---~-~~ 292 (611)
.+. +||.||-|++++.. .++......|+ .....++||.|...+.+ .|+.+.+..+- |+.+. . .-
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 466 99999988866444 44433322111 23457899999886544 45554443221 11100 0 00
Q ss_pred ccc----cCCCC---------CCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcC---CCcccchhhhccceeEeeCC
Q 007247 293 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 356 (611)
Q Consensus 293 ~~~----~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~Ng 356 (611)
.|. ..+.. .+....+++-..++..|..|--||.-..+.+.+... +.+- +.++.-|.||
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~------p~kf~nvTNG 453 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLW------PNKFHNVTNG 453 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhC------CCccCCcCCC
Confidence 000 00000 000113445555666777888888776665443111 1111 3367789999
Q ss_pred cccCCcC----CCCcc----ccc-------------cccCc-ch----hhhccHHHHH----HHHHHhCCCCCCCCcEEE
Q 007247 357 MDVQEWN----PLTDK----YIG-------------VKYDA-ST----VMDAKPLLKE----ALQAEVGLPVDRNIPVIG 406 (611)
Q Consensus 357 vd~~~~~----p~~~~----~~~-------------~~~~~-~~----~~~~~~~~~~----~~~~~~gl~~~~~~~~il 406 (611)
|+...|- |.-.. ++. .+|.. .. +.+.|...|. .++++.|+..+++...++
T Consensus 454 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 533 (798)
T PRK14985 454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533 (798)
T ss_pred cCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchh
Confidence 9998884 32111 111 01222 12 1233333333 455777988888989999
Q ss_pred EEcCcccccCHHH-HHHHHHhccc----C-----CcEEEEEeCCCc------hhHHHHHHHHHHC------CC--ceEEe
Q 007247 407 FIGRLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKK------PMEKQLEQLEILY------PE--KARGV 462 (611)
Q Consensus 407 ~iGrl~~~Kg~d~-li~a~~~l~~----~-----~~~lvivG~g~~------~~~~~l~~l~~~~------~~--~v~~~ 462 (611)
++-|+.++|...+ ++..+.++.+ + +.++++.|...+ .+-+.+..++... .+ ++.++
T Consensus 534 q~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 9999999999999 7666554432 2 488999998653 3344444444322 12 68888
Q ss_pred cccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
..++..++..++.+||+....|+. |.+|..=+-+|..|.+.|++-.|...|+.++ +.|||.||
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 899999999999999999998874 9999999999999999999999999999886 78999996
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-08 Score=115.08 Aligned_cols=287 Identities=18% Similarity=0.213 Sum_probs=189.2
Q ss_pred CCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCccc--------
Q 007247 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF-------- 288 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~-------- 288 (611)
++. +||.||-|++++.. .++.....+|+ .....++||.|...+.+ .++.+.+..+- |+.+
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~l-pr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLL-PRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHC-hHHHHHHHHHHH
Confidence 466 99999988866444 44433322111 13457899999876544 35554443221 1111
Q ss_pred ----------------ccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccc
Q 007247 289 ----------------KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTG 349 (611)
Q Consensus 289 ----------------~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~ 349 (611)
...+..++.- ..+.+++-..++..|..|-.||.-..+.+++.. .+..- +.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~------P~k 447 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELY------PEK 447 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhC------CCc
Confidence 0011111110 012356666678889999999998887776520 11121 236
Q ss_pred eeEeeCCcccCCcCCCCcc--------ccccc-------------cC-c----chhhhccHHHHH----HHHHHhCCCCC
Q 007247 350 IKGIVNGMDVQEWNPLTDK--------YIGVK-------------YD-A----STVMDAKPLLKE----ALQAEVGLPVD 399 (611)
Q Consensus 350 i~vI~Ngvd~~~~~p~~~~--------~~~~~-------------~~-~----~~~~~~~~~~~~----~~~~~~gl~~~ 399 (611)
+.-+.||++...|--...+ ++... |- . ..+.+.|...|. .+++..|+..+
T Consensus 448 f~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ld 527 (797)
T cd04300 448 FNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVD 527 (797)
T ss_pred cCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 7789999999888521111 11100 11 1 123334444444 45567899889
Q ss_pred CCCcEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHHH---C---CC
Q 007247 400 RNIPVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL---Y---PE 457 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~---~---~~ 457 (611)
++...++++-|+.++|...+ ++..+.++ ++ + +.++++.|...+ .+-+.+-.++.. . .+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 99999999999999999999 66665444 43 2 488999998653 344455555542 2 22
Q ss_pred --ceEEecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 458 --KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 458 --~v~~~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
++.++..++..++..++.+||+....|+. |.+|..=+-+|..|.+.++|-.|...|+.++ ++|+|+||
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 68888899999999999999999998874 9999999999999999999999999999987 78999996
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-08 Score=112.29 Aligned_cols=288 Identities=20% Similarity=0.237 Sum_probs=188.3
Q ss_pred CCCeEEEecCCccchHHHH-HHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccC---------CCcc
Q 007247 227 GEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN---------LPAQ 287 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~-l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~---------~~~~ 287 (611)
.+. +||.||-|++++..- ++......|+ .....++||.|.+.+.+ .++.+.+..+- +...
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 456 899999888665444 4433322111 13457899999886544 45555443221 1111
Q ss_pred ccc--------------ccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccce
Q 007247 288 FKS--------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGI 350 (611)
Q Consensus 288 ~~~--------------~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i 350 (611)
+.. .+..++.- ..+.+++-..++..|..|-.||+-..+.+++.. .+..- +.++
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf 445 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEG----QSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKF 445 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecC----CCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCcc
Confidence 111 00000100 012456666678889999999998887766310 11121 2367
Q ss_pred eEeeCCcccCCcCCCCcc---ccccc------------------c-Cc----chhhhccHHHHH----HHHHHhCCCCCC
Q 007247 351 KGIVNGMDVQEWNPLTDK---YIGVK------------------Y-DA----STVMDAKPLLKE----ALQAEVGLPVDR 400 (611)
Q Consensus 351 ~vI~Ngvd~~~~~p~~~~---~~~~~------------------~-~~----~~~~~~~~~~~~----~~~~~~gl~~~~ 400 (611)
.-+.||+....|--...+ .+..+ | +. ..+.+.|...|. .+++..|+..++
T Consensus 446 ~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp 525 (794)
T TIGR02093 446 NNKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDP 525 (794)
T ss_pred CCcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCc
Confidence 789999999888522111 11111 1 11 223333444444 355678988888
Q ss_pred CCcEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHHH------CCC-
Q 007247 401 NIPVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE- 457 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~- 457 (611)
+...++++-|+.++|...+ ++..+..+ ++ + +.++++.|...+ .+-+.+-.++.. ..+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~ 605 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDK 605 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCc
Confidence 9899999999999999999 66665444 33 2 668999998653 344444444432 122
Q ss_pred -ceEEecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 458 -KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 458 -~v~~~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+|.++..++..++..++.+||+....|+. |.+|..=+-+|..|.+.|.+-.|...|+.++ ++|+|+||
T Consensus 606 lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 606 LKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred eeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 68888999999999999999999998874 9999999999999999999999999999987 88999996
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.3e-08 Score=107.41 Aligned_cols=288 Identities=19% Similarity=0.262 Sum_probs=165.4
Q ss_pred eEEEecCCccchHH-HHHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCc----------ccc
Q 007247 230 VVFVANDWHTSLIP-CYLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 289 (611)
Q Consensus 230 vivh~hd~~~~~~~-~~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~----------~~~ 289 (611)
++||.||-|++++. -.++.....+|+ ....-.+||.|...+.+ +|+.+.+..+ +|+ .|.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 48999998886644 444444433333 12346899999986655 4665554322 111 110
Q ss_pred --------------cccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeC
Q 007247 290 --------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355 (611)
Q Consensus 290 --------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 355 (611)
..+...+.- ....+++-..++..|..+-.||.-..+.+++.... +..+ +-+.++.-|.|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~----~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~--~f~~-l~P~kf~nvTN 367 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEG----NSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFK--DFYE-LWPEKFGNVTN 367 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETS----SSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTH--HHHH-HSGGGEEE---
T ss_pred HHHHHHhcCcchhhhhccccccc----chhhcchhHHHHHhcccccchHHHHHHHHHHHHhh--hhhh-cCCceeecccc
Confidence 001111100 11356677778889999999999988877642111 1111 12347899999
Q ss_pred CcccCCcCCCCc--------ccccccc--Ccch----------------hhhc----cHHHHHHHHHHhCCCCCCCCcEE
Q 007247 356 GMDVQEWNPLTD--------KYIGVKY--DAST----------------VMDA----KPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 356 gvd~~~~~p~~~--------~~~~~~~--~~~~----------------~~~~----~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
||+...|--... +++...+ ++.. +.+. |....+.++++.|+..+++...+
T Consensus 368 GVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfd 447 (713)
T PF00343_consen 368 GVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFD 447 (713)
T ss_dssp -B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEE
T ss_pred CccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhh
Confidence 999988853211 1222111 1111 1112 22223345667788778888889
Q ss_pred EEEcCcccccCHHHH-H---HHHHhccc------CCcEEEEEeCCCc------hhHHHHHHHHH---HCC---C--ceEE
Q 007247 406 GFIGRLEEQKGSDIL-A---AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP---E--KARG 461 (611)
Q Consensus 406 l~iGrl~~~Kg~d~l-i---~a~~~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~---~--~v~~ 461 (611)
+++-|+.++|...+. + +-+.++++ .++++++.|...+ .+.+.+.+++. ..| + +|.+
T Consensus 448 v~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvF 527 (713)
T PF00343_consen 448 VQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVF 527 (713)
T ss_dssp EEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEE
T ss_pred hhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEe
Confidence 999999999998883 3 34444443 2689999998653 23344444443 222 2 6888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+..++..++..++.+||+.+..|+. |.+|..-+-+|..|.+.+++-.|...|+.++ ..|.|+||
T Consensus 528 lenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 528 LENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp ETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred ecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 9999999999999999999999875 9999999999999999999999999998764 46889996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.5e-09 Score=106.04 Aligned_cols=321 Identities=17% Similarity=0.231 Sum_probs=177.6
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccC-cccccccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA-FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+-||-|.|+|+.+...+..+... ..+-.|||.|..-. ||+- -......+.-+ +|+......+......
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd----~f~vD~EAGkr~IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLD----SFDVDKEAGKRQIYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchh----hcccchhhccchhHHH
Confidence 35577899999876554444322 37788999996543 3321 11111111111 1111122222222234
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
+.+++.+...|+...|||+-.+-+.. .++..+.=.+.|||.++..|...-.- + .-.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HEF---Q--------NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHEF---Q--------NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHHH---H--------HHHHHH
Confidence 56677788888999999987654433 23333445667999999877543110 0 011122
Q ss_pred HHHHHHH-----hC-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCCC--------
Q 007247 387 KEALQAE-----VG-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGK-------- 441 (611)
Q Consensus 387 ~~~~~~~-----~g-l~~~~-~~~~il~iGrl~-~~Kg~d~li~a~~~l~~------~~---~~lvivG~g~-------- 441 (611)
++.+++. +| +.-|= +...++..||.+ ..||-|++|+++++|.- .+ +-|+|.-...
T Consensus 302 KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesL 381 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESL 381 (692)
T ss_pred HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhh
Confidence 3333321 22 22222 334566679998 59999999999999842 11 2233332210
Q ss_pred ------chh---------------------------HHH--------HHH----HHH-HCC-------------------
Q 007247 442 ------KPM---------------------------EKQ--------LEQ----LEI-LYP------------------- 456 (611)
Q Consensus 442 ------~~~---------------------------~~~--------l~~----l~~-~~~------------------- 456 (611)
+.+ .+. +++ +.. .+|
T Consensus 382 kgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~i 461 (692)
T KOG3742|consen 382 KGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSI 461 (692)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHh
Confidence 000 000 000 000 000
Q ss_pred ------------CceEEecccCh-------HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc----c
Q 007247 457 ------------EKARGVAKFNI-------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV----D 513 (611)
Q Consensus 457 ------------~~v~~~~~~~~-------~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~----e 513 (611)
.++.++..|.. -+..++.++|.+.++||.+|++|.+..|.--+|+|.|+++.+|+. |
T Consensus 462 Rr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMee 541 (692)
T KOG3742|consen 462 RRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEE 541 (692)
T ss_pred HhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHH
Confidence 12233333311 123368899999999999999999999999999999999988754 4
Q ss_pred ceecC-cceEEecccccccc-cCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHhhCCchHHHHHHHHHHHHHH
Q 007247 514 TVEEG-FTGFQMGSFSVDCE-AVDPVDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 514 ~v~~g-~~G~l~~~~~~~~~-~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.|++. ..|+.+ +|-- .-..++++++++-|...... .+++++.++. ...-++|+.+...|.+.=.-.+
T Consensus 542 hi~d~~ayGIYI----vDRRfks~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 542 HIEDPQAYGIYI----VDRRFKSPDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HhcCchhceEEE----EecccCChhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 44432 234433 1100 11344567888888877764 3444443332 4577899999988877655444
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.2e-07 Score=86.88 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=110.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
.||++|++-=-| ...||.++++.+|+..|+++||+|+|.|........ ....+|++.
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~----------------------~~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK----------------------EFEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC----------------------CcccCCeEE
Confidence 379999987567 379999999999999999999999999976221111 112357777
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCc-cchHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 243 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~-~~~~~ 243 (611)
+.+..|..- ....+.+...++..++.....+ ..+.| ||+.+... .+++.
T Consensus 59 ~~i~~~~~g----------------------~~~si~yd~~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~ 108 (185)
T PF09314_consen 59 VYIPAPKNG----------------------SAESIIYDFLSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFL 108 (185)
T ss_pred EEeCCCCCC----------------------chHHHHHHHHHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHH
Confidence 766544211 0112222333444444322110 12478 88888766 34444
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh-HhHHHhhhccEEEe
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLT 322 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi~ 322 (611)
.+++.... .+.|+++.+|.+.+.- -.+... ..+.+. -++.+.+.+|.+|+
T Consensus 109 ~~~r~~~~-----~g~~v~vN~DGlEWkR---------~KW~~~---------------~k~~lk~~E~~avk~ad~lIa 159 (185)
T PF09314_consen 109 PFLRKLRK-----KGGKVVVNMDGLEWKR---------AKWGRP---------------AKKYLKFSEKLAVKYADRLIA 159 (185)
T ss_pred HHHHhhhh-----cCCcEEECCCcchhhh---------hhcCHH---------------HHHHHHHHHHHHHHhCCEEEE
Confidence 44444321 3679999999765411 001000 001112 22456789999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcc
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 358 (611)
.|+...+.+.+ .|+- .+.+.|++|.|
T Consensus 160 Ds~~I~~y~~~--~y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 160 DSKGIQDYIKE--RYGR--------KKSTFIAYGAD 185 (185)
T ss_pred cCHHHHHHHHH--HcCC--------CCcEEecCCCC
Confidence 99999999986 3441 26788999976
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.3e-06 Score=89.08 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=127.4
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeC-CcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
+-||..++.++..++.+.+ .|.+.. +|.++-| ++|.-.+... ..++.+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~-------------------~~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDL-------------------LSKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhc-------------------cCHHHHHHH
Confidence 3568889999999998875 565533 6666655 4553322111 014566778
Q ss_pred hCCCCCCCCcEEEEEcCcc--cc---cCHHHHHHHHHhcccCCcEEEEE-e-CCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 394 VGLPVDRNIPVIGFIGRLE--EQ---KGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~--~~---Kg~d~li~a~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
+|++.+ ...+++.+-+-+ .. +.+..+++++.++ ..++.++.- + .+.....+.++++... ..++.......
T Consensus 195 lgl~~~-~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLD-KPYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCC-CCEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 887532 223334443322 22 3355555555554 124433221 2 2222345556555322 23587787778
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
......+++.||+++--|. |.. .||.++|+|+|+ .+.-+|.+..|.+.+++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNSS----SGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 8888889999999994442 333 899999999995 45678888778787764 46899999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 582 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (611)
.++++ +..+..+ ......|-....++++.++
T Consensus 334 ~~~~~---~~~~~~~--~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSL--KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHH--hhCCCCCCCChHHHHHHHh
Confidence 99543 2222222 1112346555666766654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-05 Score=83.70 Aligned_cols=258 Identities=16% Similarity=0.080 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH--HHHHhccCCCCCCCceEEEEEecCcccccc
Q 007247 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC--YLKTMYKPKGMYKSAKVVFCIHNIAYQGRF 274 (611)
Q Consensus 197 ~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~--~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~ 274 (611)
..++..+.+...++.+.+..+ +|| ++.+-|.+...+.. .+++.. +++|+|+.+--.
T Consensus 64 L~~lp~llk~~~~~~~~i~~~---------kpD-~~i~IDsPdFnl~vak~lrk~~------p~i~iihYV~Ps------ 121 (381)
T COG0763 64 LGRLPRLLKIRRELVRYILAN---------KPD-VLILIDSPDFNLRVAKKLRKAG------PKIKIIHYVSPS------ 121 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---------CCC-EEEEeCCCCCchHHHHHHHHhC------CCCCeEEEECcc------
Confidence 334455566666666664433 699 56666766544443 344332 568887776511
Q ss_pred CcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEee
Q 007247 275 AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 354 (611)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ 354 (611)
.| .|+. .......+.+|+++++=|...+.+.. +|. .++.|-
T Consensus 122 ------------VW--------------AWr~-~Ra~~i~~~~D~lLailPFE~~~y~k---~g~---------~~~yVG 162 (381)
T COG0763 122 ------------VW--------------AWRP-KRAVKIAKYVDHLLAILPFEPAFYDK---FGL---------PCTYVG 162 (381)
T ss_pred ------------ee--------------eech-hhHHHHHHHhhHeeeecCCCHHHHHh---cCC---------CeEEeC
Confidence 11 1111 12334566899999999999988875 343 234444
Q ss_pred CCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcC-ccc-ccCHHHHHHHHHhccc--
Q 007247 355 NGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK-- 429 (611)
Q Consensus 355 Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGr-l~~-~Kg~d~li~a~~~l~~-- 429 (611)
+.+ |.-.+.+ +++..++++|++.+. +.+.+..|. -.+ .+-...+.+|+++++.
T Consensus 163 Hpl~d~i~~~~---------------------~r~~ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~ 220 (381)
T COG0763 163 HPLADEIPLLP---------------------DREAAREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARY 220 (381)
T ss_pred Chhhhhccccc---------------------cHHHHHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhC
Confidence 433 2211222 256689999998654 344455554 444 5567889999999985
Q ss_pred CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-C
Q 007247 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 508 (611)
Q Consensus 430 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~ 508 (611)
++.++++--... .++...++.. +... ........+...++.+..||+.+..| |.+.+|+|.+|+|.|++- .
T Consensus 221 ~~~~~vlp~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~ 292 (381)
T COG0763 221 PDLKFVLPLVNA-KYRRIIEEAL-KWEV-AGLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKV 292 (381)
T ss_pred CCceEEEecCcH-HHHHHHHHHh-hccc-cCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEec
Confidence 789988765443 2333333332 2221 11222334445667999999988665 899999999999987763 3
Q ss_pred cc----------------cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 509 GG----------------LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 509 gg----------------~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
.. ++.++-+. .+++.+-. +.-.++.+++++..++.+.
T Consensus 293 ~~it~~iak~lvk~~yisLpNIi~~~---~ivPEliq-----~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 293 KPITYFIAKRLVKLPYVSLPNILAGR---EIVPELIQ-----EDCTPENLARALEELLLNG 345 (381)
T ss_pred cHHHHHHHHHhccCCcccchHHhcCC---ccchHHHh-----hhcCHHHHHHHHHHHhcCh
Confidence 32 22222211 11111101 3345889999999999883
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.57 E-value=1e-05 Score=84.39 Aligned_cols=295 Identities=17% Similarity=0.173 Sum_probs=160.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++=-.+ +| .-.+...+..+|.++||+|.|.+..++...+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 34 3558889999999999999999988765433211 113333
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
..+- +.+..++ .+.........++.+.... ++|| ++.++....+....
T Consensus 52 ~~iG----------~~g~~~~------------~Kl~~~~~R~~~l~~~~~~---------~~pD-v~is~~s~~a~~va 99 (335)
T PF04007_consen 52 IVIG----------KHGDSLY------------GKLLESIERQYKLLKLIKK---------FKPD-VAISFGSPEAARVA 99 (335)
T ss_pred EEEc----------CCCCCHH------------HHHHHHHHHHHHHHHHHHh---------hCCC-EEEecCcHHHHHHH
Confidence 3331 1111111 1222233333444443321 3799 55554322222111
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
++ .++|.|....+..- . ...+..+.-||.++++.
T Consensus 100 ~~----------lgiP~I~f~D~e~a-~-----------------------------------~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 100 FG----------LGIPSIVFNDTEHA-I-----------------------------------AQNRLTLPLADVIITPE 133 (335)
T ss_pred HH----------hCCCeEEEecCchh-h-----------------------------------ccceeehhcCCeeECCc
Confidence 11 38898888774210 0 00111344689999887
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEe-eCCcccCC----cCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~Ngvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
-.-...+.. +|.+ + .+. +||++.-. |.| ...+.+++|+.
T Consensus 134 ~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d~~vl~~lg~~-- 177 (335)
T PF04007_consen 134 AIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------DPEVLKELGLD-- 177 (335)
T ss_pred ccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------ChhHHHHcCCC--
Confidence 655544443 4433 2 234 67776533 333 34578888965
Q ss_pred CCCcEEEEEcCcccccC------HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 400 RNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg------~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+.+.|+. |.++.+- -.++-+.+++|.+..-.++++-...+. ..+.++++ +.. .. ..-..+.+
T Consensus 178 -~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-----~~~~~~~~--~~i-~~-~~vd~~~L 245 (335)
T PF04007_consen 178 -DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-----RELFEKYG--VII-PP-EPVDGLDL 245 (335)
T ss_pred -CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-----hhHHhccC--ccc-cC-CCCCHHHH
Confidence 2244443 5444322 233556666665533336666544321 12223332 111 11 11123369
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc---cccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+..||+++- +-|....||...|+|.|.+..|- .-+.+.+ .|+++ ...|++++.+.+...+
T Consensus 246 l~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 246 LYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHHhh
Confidence 999999993 34688999999999999976542 2233333 46766 7789999998776655
Q ss_pred H
Q 007247 551 A 551 (611)
Q Consensus 551 ~ 551 (611)
.
T Consensus 309 ~ 309 (335)
T PF04007_consen 309 G 309 (335)
T ss_pred h
Confidence 4
|
They are found in archaea and some bacteria and have no known function. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.8e-05 Score=83.87 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=80.0
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEE-EEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...++++......+. ..++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhh
Confidence 3457778888754 34455666666665 45544 45543311 1 234556765554432 257999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll 550 (611)
||++|.- +-..++.||+++|+|+|+....+ ..+.+.+.+.|... +.. +.+++++++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 9999932 23488999999999999987654 23344455567654 333 7899999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.3e-05 Score=81.56 Aligned_cols=271 Identities=15% Similarity=0.127 Sum_probs=145.1
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+||+|++.-|-.+.++++..... .++| |.++|. |.-..+ . ..+.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~Hiea----GlRs~d-~-~~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEA----GLRSGD-R-TEGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES---------S--T-TSSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecC----CCCccc-c-CCCCch--------------------
Confidence 69966655566667776666654 4899 555663 110000 0 001111
Q ss_pred hhHhHHHhh-hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccH
Q 007247 307 INWMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (611)
Q Consensus 307 ~~~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (611)
...|..+. -||..++.++..++.+.+ .|.+.+ +|.++-|- +|.-... +.
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~-------------------~~ 163 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQN-------------------KE 163 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHH-------------------HH
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHh-------------------HH
Confidence 23344443 689999999999999997 677655 78777653 3321100 00
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCce
Q 007247 385 LLKEAL-QAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (611)
Q Consensus 385 ~~~~~~-~~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (611)
...+.+ ...+... ..+..+++..=|.+. ......+.++++.|.+ +++++++.....+.....+.+...++ .++
T Consensus 164 ~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 000001 1111001 123334444433332 3345677777777766 58999998886666677776666666 478
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccC
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d 538 (611)
..+..........+++.|+++|--| |-++-||..+|+|+|.-+ .|--.+.+..+.+-+ + ..|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgdS-----sGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGDS-----SGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEESS-----HHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEEcC-----ccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 8888888877778999999998443 544559999999999985 455566666565544 5 389
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (611)
.+++.++|.+++.+ ...+.++.. ....|.-...++++.+++
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 99999999999986 344433321 123565566677766665
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.7e-05 Score=79.90 Aligned_cols=192 Identities=19% Similarity=0.184 Sum_probs=117.6
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
.+..-+.+|.++++=|...+.+.+ +|+ +++.+-|.+= +...+..+ ...
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 344456789999999999998886 443 3555555431 11111110 334
Q ss_pred HHHHhCCCCCCCCcE-EEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 390 LQAEVGLPVDRNIPV-IGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~-il~iG-rl~~-~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.++.+ ++. +.++ .+..| |-.+ .+....++++++++.+ +++++++..... ...+.+++.....+.++.....
T Consensus 175 ~~~~~-l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~ 250 (373)
T PF02684_consen 175 AREKL-LDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII 250 (373)
T ss_pred HHHhc-CCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc
Confidence 45555 554 3344 34444 4555 4556999999999986 789998876543 3455566655554433332221
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcc----------------cccceecCcceEEeccc
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGG----------------LVDTVEEGFTGFQMGSF 527 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg----------------~~e~v~~g~~G~l~~~~ 527 (611)
. ......++.||+.+..| |.+-+|++.+|+|.|+. ..+. ++.++-+.. +++.+
T Consensus 251 -~-~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~---v~PEl 320 (373)
T PF02684_consen 251 -E-GESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE---VVPEL 320 (373)
T ss_pred -C-CchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC---cchhh
Confidence 2 23446899999999776 79999999999997665 3442 233222211 11111
Q ss_pred ccccccCCccCHHHHHHHHHHHHHh
Q 007247 528 SVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 528 ~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
- -+..+++.+++++..+++|
T Consensus 321 i-----Q~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 I-----QEDATPENIAAELLELLEN 340 (373)
T ss_pred h-----cccCCHHHHHHHHHHHhcC
Confidence 1 1466899999999999998
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.3e-05 Score=81.00 Aligned_cols=209 Identities=16% Similarity=0.111 Sum_probs=119.8
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
-+.||.|++..+...+.+.+ +|+ ++..+-|.+=.... +.. +
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~-~~~--------------------~------ 198 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLE-PPE--------------------R------ 198 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCc-ccc--------------------c------
Confidence 35799999999998888874 332 45566665421111 100 0
Q ss_pred hCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCC-------------
Q 007247 394 VGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------- 457 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl--~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~------------- 457 (611)
.+++.+ ...++++.|.- +..+++..++++++++.+ +++++++.-.+.... +.+++.....+-
T Consensus 199 ~~l~~~-~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 199 KPLLTG-RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred cccCCC-CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchhh
Confidence 033222 22344555554 235678899999999965 578876654233223 223332222111
Q ss_pred ---ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc---cceec-----CcceEEecc
Q 007247 458 ---KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEE-----GFTGFQMGS 526 (611)
Q Consensus 458 ---~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~-----g~~G~l~~~ 526 (611)
.+... .+. .....+++.||++|..| |.+..|++++|+|+|.....+.. .+.+. + ..+.
T Consensus 277 ~~~~~~v~-~~~-~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~--- 345 (396)
T TIGR03492 277 QKGTLEVL-LGR-GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVF--- 345 (396)
T ss_pred ccCceEEE-ech-HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEe---
Confidence 12222 222 33567999999999774 56779999999999998743321 11121 2 2222
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
+...+++.+++++.++++| ++.+.+|.++. .+.+.-...+++..+++.
T Consensus 346 -------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~~~-~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 346 -------LASKNPEQAAQVVRQLLAD--PELLERCRRNG-QERMGPPGASARIAESIL 393 (396)
T ss_pred -------cCCCCHHHHHHHHHHHHcC--HHHHHHHHHHH-HHhcCCCCHHHHHHHHHH
Confidence 2567789999999999987 66666666322 233333344444444433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.7e-05 Score=81.10 Aligned_cols=119 Identities=19% Similarity=0.260 Sum_probs=80.4
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
...+++++|..... .++++++++ ++.+++++|.... .....++. +..|..+...++|+.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~----------~~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAA----------DPRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCcc----------cccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44688999998776 667888886 5788989976531 11134565 4456656677899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEcCCcccccc------eecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 481 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVDT------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 481 l~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e~------v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
|.- .|.. +.||+++|+|+|+-...+..|. +++.+.|..+ -.+.-+++.+.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 954 3444 9999999999999887654443 3334445543 01244678888877653
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.4e-06 Score=75.19 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=28.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
|||+|+... ..++..++.+|.++||+|.++++..
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 689998753 2367899999999999999999863
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.3e-05 Score=77.65 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=69.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
.++++.|..++.+....+++++.++. .++++ +|+|.+.+ ..+.++++....+ ++... . ..+.+..+|+.||+++
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~-~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF-I-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE-e-CHHHHHHHHHHCCEEE
Confidence 47888998888777788889988764 33443 46777654 3455666666554 45533 3 3345667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 67999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00024 Score=78.66 Aligned_cols=205 Identities=14% Similarity=0.111 Sum_probs=117.8
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
.+..-+..|+++|+=|...+.+.+ +|+ +++.+-|.+ |. ..+.. .++
T Consensus 355 ikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~ 401 (608)
T PRK01021 355 KTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNL 401 (608)
T ss_pred HHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHH
Confidence 344556789999999999988875 444 345555543 32 11111 145
Q ss_pred HHHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHH--hcccCCcEEEEEeCCCchhHHHHHHHHHHCC-CceEEec
Q 007247 389 ALQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVA 463 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~li~a~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~ 463 (611)
+.++++|++.+. ..+.+..| |-.+ .+....+++|++ ++. ++.++++... +....+.+++.....+ ..+...
T Consensus 402 ~~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii- 477 (608)
T PRK01021 402 SWKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIV- 477 (608)
T ss_pred HHHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEe-
Confidence 668888986432 23335555 4545 567889999998 654 3688877543 3334455555543322 112211
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecC-------cce---EEecccccccc
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-------FTG---FQMGSFSVDCE 532 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-------~~G---~l~~~~~~~~~ 532 (611)
.+....++++.||+.+..| |.+-+|++.+|+|.|+. ..+.+.-.+... .-| ++.| -.+-.+
T Consensus 478 --~~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPE 549 (608)
T PRK01021 478 --PSQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPE 549 (608)
T ss_pred --cCcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchh
Confidence 1112357999999999776 79999999999997774 344222211000 000 0000 011133
Q ss_pred cC---CccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 533 AV---DPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 533 ~v---~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
++ +..+++.+++++ +++.| ++.++++.
T Consensus 550 llqgQ~~~tpe~La~~l-~lL~d--~~~r~~~~ 579 (608)
T PRK01021 550 FIGGKKDFQPEEVAAAL-DILKT--SQSKEKQK 579 (608)
T ss_pred hcCCcccCCHHHHHHHH-HHhcC--HHHHHHHH
Confidence 44 466899999996 77776 44444443
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.0033 Score=65.67 Aligned_cols=223 Identities=17% Similarity=0.120 Sum_probs=141.3
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHH-
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE- 393 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 393 (611)
-||.-++.++..++.+.+ .|++.+ +|.++-|-+ |.-.+.- .+..........
T Consensus 145 ~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~-----------------~~~~~~~~~~~~~ 198 (383)
T COG0381 145 LSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTR-----------------DRVLEDSKILAKG 198 (383)
T ss_pred hhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHH-----------------hhhccchhhHHhh
Confidence 588999999999999986 676644 788887754 2111110 000011112222
Q ss_pred hCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
++. ..++..++..=|-+.. +++..+++++.++.+ +++.++.-=...+...+.. ....+...++..+-.+.....
T Consensus 199 ~~~--~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 199 LDD--KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred hcc--ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHHH
Confidence 222 1233455556665544 888999998888876 4676665443332222222 222222345777777888778
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..++..|-+++-- .|-.+=||-..|+||++-+. ..-+|.++.| +-.++ ..|.+.+.+++..+
T Consensus 276 ~~L~~~a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-----------g~~~~~i~~~~~~l 338 (383)
T COG0381 276 HNLMKNAFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-----------GTDEENILDAATEL 338 (383)
T ss_pred HHHHHhceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-----------CccHHHHHHHHHHH
Confidence 8899999766633 47889999999999999874 4456666544 44543 46779999999999
Q ss_pred HHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 550 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 550 l~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++ ++.+++|+.. ...|.-....+++.+++.+-..
T Consensus 339 l~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 339 LED--EEFYERMSNA--KNPYGDGNASERIVEILLNYFD 373 (383)
T ss_pred hhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHhh
Confidence 998 6666666553 3556666677777777765543
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0018 Score=71.96 Aligned_cols=125 Identities=10% Similarity=-0.010 Sum_probs=79.2
Q ss_pred CcEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH--
Q 007247 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-- 474 (611)
Q Consensus 402 ~~~il~iGrl~~-----~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~-- 474 (611)
.++++..|.... .+-...+++|++++ +.++++..++.. . . ...|+++.....++.. .++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~---~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQR---AVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHH---HHhcC
Confidence 356777888643 23356667777766 457777665431 1 1 2346677765555543 467
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
..++++|. + |-..++.||+.+|+|+|+-...+ ....+.+.+.|.... ...-+.+++.++|.+++
T Consensus 363 p~v~~fIt--H--GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~--------~~~~t~~~l~~ai~~vl 430 (507)
T PHA03392 363 KNVKAFVT--Q--GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD--------TVTVSAAQLVLAIVDVI 430 (507)
T ss_pred CCCCEEEe--c--CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec--------cCCcCHHHHHHHHHHHh
Confidence 45777772 2 33468999999999999976543 333444556777540 02236799999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
++
T Consensus 431 ~~ 432 (507)
T PHA03392 431 EN 432 (507)
T ss_pred CC
Confidence 87
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0027 Score=66.90 Aligned_cols=211 Identities=18% Similarity=0.128 Sum_probs=133.3
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
-.+.+..++..|.|++-|+..++.+.+ .|.. ++.+.-| ........ ......
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 355677788999999999999999997 5654 3333333 22111111 112233
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
...++..++.+ +++++..+. ....-++++++++.+++ +|..++++=. +++--+.++++....+-.+...-.
T Consensus 220 ~~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPR-HpERf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 220 LAALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPR-HPERFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecC-ChhhHHHHHHHHHHcCCeEEeecC
Confidence 55677776643 467888887 33334668899999987 5777777654 444556666666655322211110
Q ss_pred ----cC---------hHHHHHHHHHccEEEeCC-CCCCCcHHHHHHHHcCCceEEcC-Cccccc---ceecCcceEEecc
Q 007247 465 ----FN---------IPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVAS-TGGLVD---TVEEGFTGFQMGS 526 (611)
Q Consensus 465 ----~~---------~~~~~~i~~~aDv~l~pS-~~E~~gl~~lEAma~G~PvI~s~-~gg~~e---~v~~g~~G~l~~~ 526 (611)
+. --++..+|.-||+.++-- ..+--|--++|+.++|+|||.-. +-...| -+...+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 00 012446999999977754 44444667999999999999865 333333 33344456654
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
.|.+.+++.+..++.+ +..+.+|++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5688888888888876 777777777764
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00047 Score=74.53 Aligned_cols=178 Identities=16% Similarity=0.064 Sum_probs=103.9
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC---CceEEecc
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAK 464 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~ 464 (611)
.|+++|||.+ .+++++..++ .|=.+..++++.++.+ |+..|++..... ..++.+++...+.+ +++.+...
T Consensus 275 ~R~~~gLp~d--~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLPED--AVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp ETGGGT--SS--SEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CHHHcCCCCC--ceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCC
Confidence 3678899854 4666666665 4555777777777766 899998876543 24556666655554 46766554
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------CcceEEecccccccccCCccC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~v~~~d 538 (611)
-+.+..-..++.+|++|=+..+ +-+.+.+||+.+|+|||+-....+..-+.- |-..+ -..|
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s 416 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADS 416 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SS
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCC
Confidence 4444333577889999977544 337899999999999999764433322211 11112 2467
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---H--HhhCCchHHHHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.+++++...++.+| ++.+.++.++- + ..-|+-...++++++.|+.+.
T Consensus 417 ~~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 417 EEEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 89999999999888 55544444333 2 245888899999999998763
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0018 Score=65.10 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=119.6
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
.+.-||.+++++....+.+.. +|.++.++..-..+.-+. +...|.|. .++.+
T Consensus 123 ~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~---~v~~f~pd----------------------~evlk 174 (346)
T COG1817 123 TLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELA---NVYGFVPD----------------------PEVLK 174 (346)
T ss_pred chhhhhheecccccchHHHHH---hCCCccceecccceeEEe---ecccCCCC----------------------HHHHH
Confidence 456799999999988887774 676655333212222222 22224443 35788
Q ss_pred HhCCCCCCCCcEEEE-E-----cCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 393 EVGLPVDRNIPVIGF-I-----GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 393 ~~gl~~~~~~~~il~-i-----Grl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
++|+..+ + +.|++ . .-....++.+.+.++++.|.+.. .+++-... ..++.-+.+.+.+ ...-.
T Consensus 175 eLgl~~~-~-~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i--~pk~~ 243 (346)
T COG1817 175 ELGLEEG-E-TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNII--IPKKA 243 (346)
T ss_pred HcCCCCC-C-ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhcccc--CCccc
Confidence 9999864 2 33332 1 12345778888899999986544 45544322 2223333332211 11111
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc---ccccceecCcceEEecccccccccCCccCHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 543 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 543 (611)
.+.+ .++-.|++++ .+-|.-.-||...|+|.|++.-| +..+... +.|.++ ...|+.+..
T Consensus 244 vD~l-~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~----------~s~~~~~~~ 305 (346)
T COG1817 244 VDTL-SLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY----------HSTDEIAIV 305 (346)
T ss_pred ccHH-HHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee----------ecCCHHHHH
Confidence 1212 4777888887 34577889999999999999844 2333333 357766 667887887
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 544 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 544 ~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+.+.+.+.+. .. ++. .....+.+.+..+++.+.++.
T Consensus 306 ~~a~~~l~~~--~~-kK~------~~~k~e~~~~~ii~~ve~~~e 341 (346)
T COG1817 306 EYAVRNLKYR--RL-KKT------GVLKLEDPTRLIIDVVEEMLE 341 (346)
T ss_pred HHHHHHhhch--hh-ccc------cccccccHHHHHHHHHHHHhh
Confidence 7877777652 11 111 112345555555665555554
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0023 Score=66.92 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=72.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
.++++.|. -+...+++++.++ +++.+++ |..+. .. ..+++++... .+..+.+..++..||+++.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35566544 2456677777666 3555544 43221 11 1234556655 4544456679999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCccccc------ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
-+-+ .++.||+++|+|+|.....+..| .+.+.+.|... +..+. ++.+++...+++
T Consensus 254 ~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 6632 46999999999999988766444 34455667764 66666 444444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0084 Score=60.93 Aligned_cols=165 Identities=16% Similarity=0.120 Sum_probs=110.1
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeC--CCchhHHHHHHHHHHC-C-CceEEeccc-ChHHHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 475 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 475 (611)
+.+|+.-.+-++.-++..+++++.+....++++++ .|- |++.|.+++++.+.++ + +++.....+ +-++..++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 34455444567888899999999888778888766 454 6778888888888764 4 566655544 4455668999
Q ss_pred HccEEEeCCC-CCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 476 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 476 ~aDv~l~pS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
.||+.++.-. .++.|+.++ .+..|+||+.++ +.-..++.+.+..- +| . -+.-|...+.++=+++.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv~V-lf---~-----~d~L~~~~v~e~~rql~--- 292 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGLPV-LF---T-----GDDLDEDIVREAQRQLA--- 292 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCCeE-Ee---c-----CCcccHHHHHHHHHHHH---
Confidence 9999998774 589998877 799999998885 56667766655433 23 0 02222222222111111
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 554 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
..-++.+. |+-++..+.|.++|+.+.
T Consensus 293 ------~~dk~~I~--Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 293 ------SVDKNIIA--FFSPNYLQGWRNALAIAA 318 (322)
T ss_pred ------hhCcceee--ecCHhHHHHHHHHHHHhh
Confidence 11112222 999999999999998764
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.036 Score=58.39 Aligned_cols=91 Identities=20% Similarity=0.119 Sum_probs=59.2
Q ss_pred cEEEEEcCcc-c-ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 403 PVIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 403 ~~il~iGrl~-~-~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.+.++.|.-. + .+-...+++++.++.+...++++.|... . +.+++...+.. .+... . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHH
Confidence 3455556542 2 4566778899999876557788877654 2 44444333222 12222 1 234689999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+..| |.+-+|++.+|+|.|+.-
T Consensus 240 l~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred HhcC-----cHHHHHHHHhCCCEEEEE
Confidence 8765 788889999999987753
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.003 Score=59.32 Aligned_cols=130 Identities=20% Similarity=0.278 Sum_probs=70.7
Q ss_pred CcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecC-CccchHHHHHHHhccCCCCCCCceEEEEEecCccc
Q 007247 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271 (611)
Q Consensus 193 ~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd-~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~ 271 (611)
|...+..-..-.+++.+++..|..+ -|.|| ||++|. |-. +++++..+ +++|++..+- .+|.
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~GWGe---~Lflkdv~------P~a~li~Y~E-~~y~ 100 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHPGWGE---TLFLKDVF------PDAPLIGYFE-FYYR 100 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcCCcch---hhhHHHhC------CCCcEEEEEE-EEec
Confidence 4444555455566666666666432 25699 777773 443 55777765 8999876543 1221
Q ss_pred cccCcccccccCCCcccccccccccCCCCCCCCcchhH-hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccce
Q 007247 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 350 (611)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 350 (611)
..-. ..+...++..+ ......-+..|. ....+..||..++.|.+.+..+-.. + ..||
T Consensus 101 ~~g~-----d~~FDpe~p~~------~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI 158 (171)
T PF12000_consen 101 ASGA-----DVGFDPEFPPS------LDDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAE----------F-RSKI 158 (171)
T ss_pred CCCC-----cCCCCCCCCCC------HHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCc
Confidence 1110 11111111000 000000011222 2335668999999999988875531 1 2399
Q ss_pred eEeeCCcccCCc
Q 007247 351 KGIVNGMDVQEW 362 (611)
Q Consensus 351 ~vI~Ngvd~~~~ 362 (611)
.||+.|||++.+
T Consensus 159 ~VihdGiDt~~~ 170 (171)
T PF12000_consen 159 SVIHDGIDTDRF 170 (171)
T ss_pred EEeecccchhhc
Confidence 999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0085 Score=64.43 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=76.1
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.++++..|++..... +.+-.++..+.+.+++++ .+|.+.. ...++ ..++++......+. ..+++.||++
T Consensus 226 ~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~~~ 295 (392)
T TIGR01426 226 PVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKADAF 295 (392)
T ss_pred CEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCCEE
Confidence 345677888644322 222223333333355654 4555432 11221 24556665544443 2589999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
|..+- ..+++||+++|+|.|+....+ ..+.+.+.+.|..+. -+.-+.++++++|.+++.+
T Consensus 296 I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~ 359 (392)
T TIGR01426 296 ITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSD 359 (392)
T ss_pred EECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcC
Confidence 96542 247899999999999976543 223344555676540 0233578999999999987
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.028 Score=61.19 Aligned_cols=180 Identities=14% Similarity=0.051 Sum_probs=111.2
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-chhHHHHHHHHHHCC---CceEEecc
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 464 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 464 (611)
|.++|||.+ ..++++.++ ..|-...+++...++.+ |+..|.+.|.|+ ++....+++++++.+ .++++...
T Consensus 421 R~~lglp~~--avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPED--AVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCC--eEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 778999853 344444444 45554555555544444 899999988765 467888999988865 46777777
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccc-----ceec-CcceEEecccccccccCCccC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-----TVEE-GFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e-----~v~~-g~~G~l~~~~~~~~~~v~~~d 538 (611)
-+.+.-.+-+.-||+++=+.-+ +-..+.+||+.+|+|||+-..-.+.. ++.. |..-++ . .+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v-----------A-~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV-----------A-DS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh-----------c-CC
Confidence 7777666889999999855543 23578999999999999753221111 1111 111111 2 34
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---HH--hhCCchHHHHHHHHHHHHHHHc
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---MA--QDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~--~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
.++.++.--++-.+ ...+.+....- +. --|+.+..+++++.+|.++...
T Consensus 564 ~~dYV~~av~~g~d--ral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 44444443333333 21222221111 21 2588999999999999998864
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0013 Score=70.40 Aligned_cols=189 Identities=14% Similarity=0.184 Sum_probs=87.2
Q ss_pred ceEEEEeeeec-------CccccccHHHHhccchHHHHhC--------CC----eEEEEeecCCcccccCCCceEEEEEe
Q 007247 85 LNILFVGTEVA-------PWSKTGGLGDVLGGLPPALAAN--------GH----RVMTIAPRYDQYKDAWDTDVVIELKV 145 (611)
Q Consensus 85 MkIl~v~~~~~-------P~~~~GG~~~~~~~La~~L~~~--------Gh----~V~vit~~~~~~~~~~~~~~~~~~~~ 145 (611)
.+|++++.+-. ..+.+||.-.|+.+++++|.+. |- +|.++|..-+..... .-...++-..
T Consensus 273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t-~~~q~le~~~ 351 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT-TCNQRLEKVS 351 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG-GGTSSEEEET
T ss_pred EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC-CccccccccC
Confidence 48999997511 1225999999999999999863 43 488888654432211 0011121111
Q ss_pred CCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHH-HhhHHhccCCCCCCCC
Q 007247 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSG 224 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~ 224 (611)
+ .+..++.+...++-+-+ + +.|..| ..++. |.. -|...+. ++...+..
T Consensus 352 g--t~~a~IlRvPF~~~~gi-~--~kwisr------f~lWP------yLe------~fa~d~~~~i~~e~~~-------- 400 (550)
T PF00862_consen 352 G--TENARILRVPFGPEKGI-L--RKWISR------FDLWP------YLE------EFADDAEREILAELQG-------- 400 (550)
T ss_dssp T--ESSEEEEEE-ESESTEE-E---S---G------GG-GG------GHH------HHHHHHHHHHHHHHTS--------
T ss_pred C--CCCcEEEEecCCCCcch-h--hhccch------hhchh------hHH------HHHHHHHHHHHHHhCC--------
Confidence 1 11222222221111000 0 123332 11221 222 2233332 33344432
Q ss_pred CCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCC
Q 007247 225 PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (611)
Q Consensus 225 ~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
.|| +||.|.....+++..+.... ++|.+++-|...-.. +..+++.+-.+...+ .| .
T Consensus 401 --~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Y----hf---------s 456 (550)
T PF00862_consen 401 --KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKY----HF---------S 456 (550)
T ss_dssp ----S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-----H---------H
T ss_pred --CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhc----cc---------h
Confidence 599 99999777788888888774 999999999764311 111111111111111 00 0
Q ss_pred cchhHhHHHhhhccEEEecCHHHHH
Q 007247 305 RKINWMKAGILESDMVLTVSPHYAQ 329 (611)
Q Consensus 305 ~~~~~~k~~~~~ad~vi~vS~~~~~ 329 (611)
..+.....++..||.|||.+.....
T Consensus 457 ~qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 457 CQFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhhHHHHHhhcCCEEEEcchHhhc
Confidence 1223334568899999998875544
|
4.1.13 from EC in the following reaction: |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.057 Score=56.22 Aligned_cols=211 Identities=13% Similarity=0.084 Sum_probs=129.9
Q ss_pred hccEEEecCHHH-HHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 316 ESDMVLTVSPHY-AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 316 ~ad~vi~vS~~~-~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
..|.|++.++.. +..+.+ +.+ ..++..+++++|.+.|.|.+..
T Consensus 138 ~fd~v~~~g~~l~~~~yyq--~~~--------~~~~~~~~~a~d~~~~~~i~~d-------------------------- 181 (373)
T COG4641 138 IFDNVLSFGGGLVANKYYQ--EGG--------ARNCYYLPWAVDDSLFHPIPPD-------------------------- 181 (373)
T ss_pred hhhhhhhccchHHHHHHHH--hhc--------ccceeccCccCCchhcccCCcc--------------------------
Confidence 345566767766 444332 011 1267788999999988876420
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-------~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
..-.--+.++|.-.+. ..+.++++.. .+-++...|..- -...+.. ....++...+..+.
T Consensus 182 ----a~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y--~~~~~~~---~~~~~~~yIg~~~~ 247 (373)
T COG4641 182 ----ASYDVDLNLIGNPYPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRY--PDDIWGR---TWEPNVQYIGYYNP 247 (373)
T ss_pred ----ccceeeeEEecCCCcc-----HHHHHHHHhhccchhhhccceeeecCCcc--chhhhcc---cccchhhhhhccCc
Confidence 0011248888887664 3444444322 134566666541 0011111 01112333333333
Q ss_pred -HHHHHHHHHccEEEeCCCC---CC---CcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHH
Q 007247 468 -PLAHMIIAGADFILIPSRF---EP---CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 468 -~~~~~i~~~aDv~l~pS~~---E~---~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
...+..++.-|+.+.-++. ++ +.+-+.|+|+||.+-|++..-++.-.+.+|+.-.+ ..|..
T Consensus 248 ~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~k 315 (373)
T COG4641 248 KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSK 315 (373)
T ss_pred cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE------------ecCHH
Confidence 4445577777777765543 22 37889999999999999999999999998876554 48999
Q ss_pred HHHHHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 541 AVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 541 ~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++.+.++.++...+ +.+..+.+.+.+...|+.+.-+.++.+...++..
T Consensus 316 dl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~ 364 (373)
T COG4641 316 DLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINI 364 (373)
T ss_pred HHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999998732 2344444555556679999988888887777543
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.94 Score=49.24 Aligned_cols=216 Identities=13% Similarity=0.101 Sum_probs=111.3
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..+.++|.|.+=-+...+.+.+ .|++.. ++.+.+ |+.+.-+.... .....
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~--------------~~~~~ 221 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTE--------------DFTAS 221 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccc--------------ccccc
Confidence 45567788999988888888887775 566533 344433 33322111000 00000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcC-cccc-c--------CHHHHHHHHHhcccCCcEEEEEeCC------CchhHHHHHHH
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGR-LEEQ-K--------GSDILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQL 451 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGr-l~~~-K--------g~d~li~a~~~l~~~~~~lvivG~g------~~~~~~~l~~l 451 (611)
..+....+.+. ..++|++.=| +.+. | -...+.+++..+.+++.+++++-.- ..+.....+++
T Consensus 222 ~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 222 YAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHH
Confidence 01111112211 2345655433 3211 1 1245666777776667676665531 11122333444
Q ss_pred HHHCCC--ceEE-ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc-cccceec-CcceEEecc
Q 007247 452 EILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMGS 526 (611)
Q Consensus 452 ~~~~~~--~v~~-~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~l~~~ 526 (611)
....+. ++.. ...++..++..++++||+++-.-. =.++=|++.|+|+|+-.... ...++++ |...++.
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~-- 372 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI-- 372 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--
Confidence 444332 2222 223555666689999998764332 24566899999999987532 2222221 1112221
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
-++.-+.+++.+.+.+++++ .+.+++..++++
T Consensus 373 ------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 373 ------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred ------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 12455678999999999998 555544444443
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.039 Score=58.83 Aligned_cols=193 Identities=15% Similarity=0.148 Sum_probs=95.6
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
.........|.+++.|+...+.+.+ .++.+.+ + ++..|..- .|. +........+
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~------~--i~~~G~PR------~D~----------l~~~~~~~~~ 180 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKK--AFGYPED------K--ILVTGYPR------NDY----------LFNKSKENRN 180 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHH--HTT--GG------G--EEES--GG------GHH----------HHHSTT-HHH
T ss_pred hhhhhccCCcEEEECCHHHHHHHHH--HhccCcc------e--EEEeCCCe------EhH----------HhccCHHHHH
Confidence 3445667899999999999998885 3555533 2 33444321 010 0011112256
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH--------HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceE
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~--------d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~ 460 (611)
.+++.++++. ++.+|+|.-........ ..-++.+..+.+.++.|++-... ......... .....++.
T Consensus 181 ~i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~ 255 (369)
T PF04464_consen 181 RIKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNII 255 (369)
T ss_dssp HHHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEE
T ss_pred HHHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEE
Confidence 7788888764 44689998655433222 11223333444578888776542 222222222 22233454
Q ss_pred EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc--CC-------cccccceecCcceEEeccccccc
Q 007247 461 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--ST-------GGLVDTVEEGFTGFQMGSFSVDC 531 (611)
Q Consensus 461 ~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s--~~-------gg~~e~v~~g~~G~l~~~~~~~~ 531 (611)
.... ...+.+++..||++|- -++-++.|++.+++|||.- +. |...+ ..+...|-.
T Consensus 256 ~~~~--~~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~-------- 319 (369)
T PF04464_consen 256 FVSD--NEDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPI-------- 319 (369)
T ss_dssp E-TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-E--------
T ss_pred ECCC--CCCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCce--------
Confidence 3322 2246679999999983 2456899999999999954 32 11112 112223332
Q ss_pred ccCCccCHHHHHHHHHHHHHh
Q 007247 532 EAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 532 ~~v~~~d~~~la~~i~~ll~~ 552 (611)
..+.++|.++|..++++
T Consensus 320 ----~~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 320 ----VYNFEELIEAIENIIEN 336 (369)
T ss_dssp ----ESSHHHHHHHHTTHHHH
T ss_pred ----eCCHHHHHHHHHhhhhC
Confidence 36889999999999886
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.15 Score=52.72 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=105.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCC--CchhHHHHHHHHHHC-C-CceEEecc-cChHHHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAK-FNIPLAHMIIA 475 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~-~~~~~~~~i~~ 475 (611)
+.+|+.-.+-++.-++..+++++++...+++++++ .|-| .++|.+++.+.+.++ + +++...-. .+-++.-.+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 34555544567788899999999886667888766 4444 356888888888764 4 35654443 35566778999
Q ss_pred HccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 476 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 476 ~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
.||+.++.... ++.|+.++ .+.+|+||+.+...-.-..+.+.+--+++ .-|.-|.+.+.++=+++..- +
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~-d 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANV-D 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhC-c
Confidence 99999999854 89999877 79999999999865544444444333443 11333444444443333322 1
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 555 TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
. + .-.|.-.+..+.|.+.+..
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRL 355 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHH
Confidence 1 1 1236666677777776653
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.28 Score=48.59 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=57.0
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhccc----CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh----HHH
Q 007247 401 NIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI----PLA 470 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~--d~li~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~----~~~ 470 (611)
...+-+++|.=.++-.. |.+.+.+..+.+ ..+.|++--+-. -.+.++++....-....+.++-+. .-.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLNSSPGIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccccCceeEeCCCCCCCCch
Confidence 45688899987765543 344443333322 567777765533 122333333321111111111111 123
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
..+++.||.++.+-.. =.-+.||.+.|+||.+-.-
T Consensus 239 ~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 IDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred HHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 3699999999977542 3457899999999987543
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.097 Score=60.06 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=160.1
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccc-cccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
-| +|..||++..++|.+++... .++++-+..|.. |+.... ..+- .
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhsp-----fpssEi~r~lp----------------------~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSP-----FPSSEIYRCLP----------------------V 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCC-----CChHHHHHhcc----------------------c
Confidence 47 99999999999998888764 578888888843 221110 1000 0
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCc--CCCcccc-----hhh----hccceeEeeCCcccCCcCCCCccccccccC
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD-----NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~-----~~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~ 375 (611)
..-+-.++..+|.+=..+..++..+.+.+ ..+++.. ..+ +...+..+|-|+|+..+.....-
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~------- 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL------- 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------
Confidence 11122355566766666666655443311 0111111 000 12355667778877766432210
Q ss_pred cchhhhccHHH-HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----chh
Q 007247 376 ASTVMDAKPLL-KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPM 444 (611)
Q Consensus 376 ~~~~~~~~~~~-~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~~ 444 (611)
..... ..+++..+ .++.+|+-+-|+...||...=+.++.++.+ +.+.++.+..+. +++
T Consensus 260 ------~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v 328 (732)
T KOG1050|consen 260 ------PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEV 328 (732)
T ss_pred ------hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHH
Confidence 00111 22233332 256789999999999999888888888765 356666665543 122
Q ss_pred ---HHHHHHHHH----HCCC----ceE-EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcC----CceEEcCC
Q 007247 445 ---EKQLEQLEI----LYPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVAST 508 (611)
Q Consensus 445 ---~~~l~~l~~----~~~~----~v~-~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G----~PvI~s~~ 508 (611)
...+..... +++. .+. ..-.++...+-+++.-+|+.++.+..+|..++.+|+..|. .+.|.+..
T Consensus 329 ~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef 408 (732)
T KOG1050|consen 329 EELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEF 408 (732)
T ss_pred HHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeee
Confidence 222222222 2221 111 1223355566679999999999999999999999999873 67888888
Q ss_pred cccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 509 GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 509 gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
-|..++.+++.-. +.|.|.++++..|..+++.+
T Consensus 409 ~G~~~tl~d~aiv------------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 409 IGDDTTLEDAAIV------------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred ccccccccccCEE------------ECCcchHHHHHHHHHHhhcC
Confidence 8878887665322 38999999999999999983
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=1.7 Score=45.08 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=73.7
Q ss_pred cEEEEEcCcc-cccCHHHHHHHHHhccc-CCcEEEEEeCCC-chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIGRLE-EQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iGrl~-~~Kg~d~li~a~~~l~~-~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
.+++.+|.-. -..=++..++|...+.. ...-++|.|.-- ..-.+++...+.+.| ++. +..|..+.. .++++|+.
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~-I~~f~~~~~-~ll~gA~~ 297 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HIS-IFEFRNDFE-SLLAGARL 297 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeE-EEEhhhhHH-HHHHhhhe
Confidence 4566666543 23334445555555433 222366666642 223333444443334 343 445555544 69999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc-c-ceec---CcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
.|--.-+ ++.+|-++.|+|.+.-..+.-. | ++.- .+-|+. +..+-+.-+++.++++|..+++.
T Consensus 298 vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 298 VVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred eeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhcccC
Confidence 8844432 6789999999997665432212 2 2211 122321 01111344578999999988874
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.11 Score=56.08 Aligned_cols=159 Identities=17% Similarity=0.159 Sum_probs=96.3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
..++.+..|..... .+++-.+++.+.+-+.++++...+.+ ......|+++.....++.. .++..||++
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~---~~l~~ad~v 304 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQL---ELLPRADAV 304 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHH---HHhhhcCEE
Confidence 33456667777655 33333344444445888888775421 1112345566655554443 389999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
|...- -.++.||+.+|+|+|+-..+. ..+-+++-++|... -.+.-+.+.++++|.++|.+..-.
T Consensus 305 I~hGG----~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~ 372 (406)
T COG1819 305 IHHGG----AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYR 372 (406)
T ss_pred EecCC----cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHH
Confidence 97653 357899999999999876543 44556677788765 224788999999999999972112
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007247 557 ALAEMMKNGMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 557 ~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (611)
+..+..++.+.+.-..+.+++.+++++
T Consensus 373 ~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 373 RAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 222222222344444444444444443
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.68 Score=48.14 Aligned_cols=105 Identities=17% Similarity=0.087 Sum_probs=67.6
Q ss_pred CCcEEEEEcCccccc--CHH---HHHHHHHhccc-CCcEEEEEeCC--CchhHHHHHHHHHHCCCceEEeccc-ChHHHH
Q 007247 401 NIPVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF-NIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~~K--g~d---~li~a~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~ 471 (611)
...+.+.+|.-.... +.+ .+++.+..+.+ .+.++.|..+- +.+.++.|+++....+ .+..+..- ..+ +.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nP-y~ 223 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENP-YL 223 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCc-HH
Confidence 334666788654332 334 45555555554 46788888874 3456777776665443 24233222 223 44
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
.+++.||.++++.- .-.-+.||.+.|+||.+-...+
T Consensus 224 ~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 224 GFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 69999999999865 3345899999999999988665
|
The function of this family is unknown. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.033 Score=56.58 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=36.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
|+|++|+.-.+|+ ..||++..+..|.+.|.+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999988997 889999999999999988666666667664
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.099 Score=44.32 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=58.5
Q ss_pred EEEEeCCCchhHHHHHHHHHHCCCceEEe---cccChHH--HHHHHHHccEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 007247 434 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 505 (611)
Q Consensus 434 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~i~~~aDv~l~pS~~---E~~gl~~lEAma~G~PvI~ 505 (611)
++|+|. .+.+...++++..+++.++..+ ..+.... ++..+..||++|++..+ ..+-.+--+|-..|+|++-
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567774 2236778888888888777777 4454444 77899999999998876 3345567788899999999
Q ss_pred cCCcccccc
Q 007247 506 ASTGGLVDT 514 (611)
Q Consensus 506 s~~gg~~e~ 514 (611)
++..|...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 987665543
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.03 E-value=5.1 Score=40.49 Aligned_cols=87 Identities=17% Similarity=0.301 Sum_probs=55.6
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+++..|.-++ |+ +..+.+..|.+.++.+ +++|.+.+.+. .+.+...++++ +..+ .+.+.+..+|..||+.+.
T Consensus 161 ilI~lGGsDp-k~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~-~l~k~~~~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSDP-KN--LTLKVLAELEQKNVNLHIVVGSSNPTLK-NLRKRAEKYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCCh-hh--hHHHHHHHhhccCeeEEEEecCCCcchh-HHHHHHhhCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 5666666554 53 4566666666544444 34465555444 44455555553 4332 344556689999999885
Q ss_pred CCCCCCCcHHHHHHHHcCCc
Q 007247 483 PSRFEPCGLIQLHAMRYGTV 502 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~P 502 (611)
. -|.++.||...|+|
T Consensus 234 A-----aGstlyEa~~lgvP 248 (318)
T COG3980 234 A-----AGSTLYEALLLGVP 248 (318)
T ss_pred c-----cchHHHHHHHhcCC
Confidence 3 47999999999999
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.44 Score=44.19 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=17.7
Q ss_pred HhhhccEEEecCHHHHHHHHc
Q 007247 313 GILESDMVLTVSPHYAQELVS 333 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~ 333 (611)
....||.|++.|.+..+.+.+
T Consensus 116 saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 116 SALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHhceeeeecchhhHHHHHH
Confidence 345799999999999998775
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=92.53 E-value=13 Score=37.50 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=72.1
Q ss_pred EEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCc-hhHHHHHH--------------HHHHCCC-ceEEecccChH
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKK-PMEKQLEQ--------------LEILYPE-KARGVAKFNIP 468 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~-~~~~~l~~--------------l~~~~~~-~v~~~~~~~~~ 468 (611)
+|+||....||+..+++.-++..+ ++..-++-|-... .....++. .. -.|+ -+..++.+-.+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~-~~pN~~~~v~~~Yi~~ 265 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPK-PAPNSPVPVYGPYIRS 265 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG----SSS--EEEESS--HH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcc-cCCCCcceecchhhhH
Confidence 899999999999999999888776 6888888885432 11111111 00 0111 13334445445
Q ss_pred HHHHHHHHccEEEeCCC------CCCCcHHHHHHHHcCCceEEc-CCccccc-cee-----cCcceEEecccccccccCC
Q 007247 469 LAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVA-STGGLVD-TVE-----EGFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~------~E~~gl~~lEAma~G~PvI~s-~~gg~~e-~v~-----~g~~G~l~~~~~~~~~~v~ 535 (611)
..-..++.+-+...-+. .+..-.+.+|..|||+-+|-- ++|-... .++ +-..|.+ +++
T Consensus 266 E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I---------~~D 336 (355)
T PF11440_consen 266 EGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAI---------YFD 336 (355)
T ss_dssp HHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-E---------EE-
T ss_pred HHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCccee---------Eec
Confidence 55567777777665542 245778999999999876654 4553333 121 1123443 248
Q ss_pred ccCHHHHHHHHHHHHHh
Q 007247 536 PVDVAAVSTTVRRALAT 552 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~ 552 (611)
..|.++-.+.|.++..+
T Consensus 337 e~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 337 ENDLESTVEKLIEVANN 353 (355)
T ss_dssp TTSHHHHHHHHHHHHT-
T ss_pred cchHHHHHHHHHHHhcc
Confidence 88888888887776554
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.017 Score=54.10 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=50.8
Q ss_pred ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc--------ccceecCcceEEeccccc
Q 007247 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSV 529 (611)
Q Consensus 458 ~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~ 529 (611)
++..+...+ + +..+++.||++|.- +=+.++.|++++|+|.|.-...+. ...+.+.+.+..+
T Consensus 56 ~v~~~~~~~-~-m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~----- 124 (167)
T PF04101_consen 56 NVKVFGFVD-N-MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML----- 124 (167)
T ss_dssp CCEEECSSS-S-HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS-----
T ss_pred cEEEEechh-h-HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc-----
Confidence 455443333 2 56799999988832 234799999999999887665441 2222233334432
Q ss_pred ccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 007247 530 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563 (611)
Q Consensus 530 ~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 563 (611)
.-...+.+.|.++|..++.+ +....++.+
T Consensus 125 ---~~~~~~~~~L~~~i~~l~~~--~~~~~~~~~ 153 (167)
T PF04101_consen 125 ---DESELNPEELAEAIEELLSD--PEKLKEMAK 153 (167)
T ss_dssp ---ECCC-SCCCHHHHHHCHCCC--HH-SHHHCC
T ss_pred ---CcccCCHHHHHHHHHHHHcC--cHHHHHHHH
Confidence 01223468899999998887 554444443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.18 E-value=3 Score=45.94 Aligned_cols=135 Identities=13% Similarity=0.080 Sum_probs=75.3
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.... .+-.+. ++++..+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~-~w~pQ~--~iL~h~~ 341 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVV-PWCDQL--KVLCHSS 341 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEe-ccCCHH--HHhccCc
Confidence 3356677787643 2224445555554 4678887665431 112221 12334333 333222 4788888
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+.++-++ +=.++++||+.+|+|+|+-...+ ....+.+. +.|+-+. ...+ .-...+.+++++++++++.+
T Consensus 342 v~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~-~~~~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 342 VGGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVK-REVG--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred cceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEe-cccc--cCCcCcHHHHHHHHHHHhcC
Confidence 8555555 22368999999999999976543 33334332 4566441 0000 00124679999999999975
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=91.70 E-value=2.3 Score=44.55 Aligned_cols=112 Identities=20% Similarity=0.213 Sum_probs=68.4
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcC-cccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceE-Eec
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVA 463 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGr-l~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~~ 463 (611)
..+..+++++.+ +..+++..|. ..+.|.+ +...+.++.+.+.+.+++++|+..+ .+..+++....+..+. ..+
T Consensus 162 ~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l~g 238 (334)
T TIGR02195 162 AAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNLAG 238 (334)
T ss_pred HHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccCCC
Confidence 344556665421 2234455655 3466654 4777777777666789999997542 3344555544443333 233
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
..+-.++..+++.||++|-.-. |.. ==|.|.|+|+|+--
T Consensus 239 ~~sL~el~ali~~a~l~I~~DS----Gp~-HlAaA~~~P~i~lf 277 (334)
T TIGR02195 239 ETSLDEAVDLIALAKAVVTNDS----GLM-HVAAALNRPLVALY 277 (334)
T ss_pred CCCHHHHHHHHHhCCEEEeeCC----HHH-HHHHHcCCCEEEEE
Confidence 4455667789999999996543 222 23779999999853
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=8.5 Score=40.65 Aligned_cols=103 Identities=13% Similarity=-0.002 Sum_probs=64.3
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC-Cce-EEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~i~~~ 476 (611)
+..+++..|.-.+.|.+ +...+.++.|.+.+.+++++|...+.-.+..+++..... ..+ ...+..+-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 34566777776677764 467777777766688999988643222233344443321 122 23344455667789999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
||++|-.-. |..=+ |.|+|+|+|+--.
T Consensus 263 a~l~v~nDS----Gp~Hl-AaA~g~P~v~lfG 289 (352)
T PRK10422 263 AQLFIGVDS----APAHI-AAAVNTPLICLFG 289 (352)
T ss_pred CCEEEecCC----HHHHH-HHHcCCCEEEEEC
Confidence 999996543 33333 7789999998643
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=90.36 E-value=5.2 Score=43.89 Aligned_cols=130 Identities=9% Similarity=0.001 Sum_probs=76.1
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEE-EeCCCc-hhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 402 ~~~il~iGrl~---~~Kg~d~li~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
..+++..|... ..+-+..++.+++++ +..+++ +..+.. .+.+.+ ....++++....+.+.. .+++.
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~---~~~~~~~~~v~~w~PQ~---~iL~h 344 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGY---VERVSKQGKVVSWAPQL---EVLKH 344 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHH---HHHhccCEEEEecCCHH---HHhCC
Confidence 35777888854 344456666666665 335554 332211 111111 11223445433332332 47888
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.++.++-++. =-++.+||+.+|+|+|+-...+ ....+.+ -+.|+-+ ...+.++++++|++++.
T Consensus 345 ~~v~~fvtH~--G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 345 QAVGCYLTHC--GWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred CccceEEecC--cchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 8876666662 2368999999999999875433 3334433 3566654 44578999999999997
Q ss_pred h
Q 007247 552 T 552 (611)
Q Consensus 552 ~ 552 (611)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=89.88 E-value=1.6 Score=40.93 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=22.7
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccc
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELD 342 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 342 (611)
-..+|+.++.|+..++++.+ +|++.+
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~ 160 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPE 160 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh
Confidence 44799999999999999997 888876
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.65 E-value=2.8 Score=41.65 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=60.7
Q ss_pred CCcEEEEEcCcccccCHHH--HHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceEEecccChHHHHHHHHHc
Q 007247 401 NIPVIGFIGRLEEQKGSDI--LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~--li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~~a 477 (611)
+..++++.|.-.+.|.+.. ..+.+..|.+..++++++|...+...+..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 3456667777667777544 88888888776689999997764334555555554432 23444455666677899999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
|++|-+-. |..=+ |.+.|+|+|+--
T Consensus 185 ~~~I~~Dt----g~~Hl-A~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGNDT----GPMHL-AAALGTPTVALF 209 (247)
T ss_dssp SEEEEESS----HHHHH-HHHTT--EEEEE
T ss_pred CEEEecCC----hHHHH-HHHHhCCEEEEe
Confidence 99997653 33333 788999999864
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=89.63 E-value=7.9 Score=42.74 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=63.9
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
++++...+..+-++ || ++.+||+.+|+|+|+-...+ ....+.+.+.|+.+.....+ ..-+.+++.++|
T Consensus 351 ~IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av 423 (472)
T PLN02670 351 KILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESV 423 (472)
T ss_pred HHhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHH
Confidence 37888887666666 44 68999999999999975432 33344456678765100000 113689999999
Q ss_pred HHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
++++.+.+-..+++.+++. +..+=.-+..++.+++.+.+.
T Consensus 424 ~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 424 RLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 9999763222333333221 234444455555555555443
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=89.45 E-value=8.3 Score=39.98 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=77.4
Q ss_pred CcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+.++++.|.=.+.|.+ +...+.++.+.+.+.+++++|+++. ..+..+++....+. ....+..+-.++..+++.||+
T Consensus 180 ~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l 257 (319)
T TIGR02193 180 PYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADA 257 (319)
T ss_pred CEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCE
Confidence 3456667755566765 5777777777656789888865542 22334555555443 223344555667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec-Cc-ceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~-~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
+|-+-. |..=+ |.+.|+|+|+--.+..+..... +. ...+. .+ .++.=+++++.+++.++
T Consensus 258 ~I~~DS----gp~Hl-Aaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~----~~--~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 258 VVGVDT----GLTHL-AAALDKPTVTLYGATDPGRTGGYGKPNVALL----GE--SGANPTPDEVLAALEEL 318 (319)
T ss_pred EEeCCC----hHHHH-HHHcCCCEEEEECCCCHhhcccCCCCceEEc----cC--ccCCCCHHHHHHHHHhh
Confidence 996543 33222 6788999998543322222111 11 11111 01 13455677777777665
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=88.75 E-value=3.1 Score=42.30 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=63.8
Q ss_pred EEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC-CCceE-EecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKAR-GVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~-~~~~~~~~~~~~i~~~aDv 479 (611)
+++..|.-.+.|. .+.+.+.++.+.+.+++++++|..+ -.+..+++.... ..++. ..+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4555655555554 4678888888876789999999754 234445554443 12222 2333344566789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
++-+.. |..-+ |.+.|+|+|+--.+.
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g~~ 227 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFGPT 227 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEECCC
Confidence 997653 45545 469999998865433
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=87.28 E-value=27 Score=35.80 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=58.0
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 403 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 403 ~~il~iGrl~---~~Kg~d~li~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+.|++.-|-. .....+.+.+++..+.+. +.+++++.-....-.+..+++....+.........+.++.-.++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544432 122356777888877653 777766654322223455556555443222223335555667999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+++-... =..+=|+.+|+|+|+-.
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 7664443 24556899999999764
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.43 E-value=4.7 Score=42.33 Aligned_cols=98 Identities=21% Similarity=0.234 Sum_probs=69.3
Q ss_pred cEEEEEc-CcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIG-RLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iG-rl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
.+++..| .-...|.+ +...+.++.+.+...++++.|+. +-.+..+++...+++.+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4566677 55566664 47777778777777999999977 3567777788777643334445555666689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+|-+.. |..=+ |.+.|+|+|+--
T Consensus 255 ~I~~DS----g~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----GPMHL-AAALGTPTIALY 277 (334)
T ss_pred EEccCC----hHHHH-HHHcCCCEEEEE
Confidence 886654 44433 789999999865
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=86.25 E-value=13 Score=40.89 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=48.1
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
.+++..++-.+-++ || ++++||+.+|+|+|+-...+ ....+.+. +.|+.+. ..-+.++++++
T Consensus 336 ~iL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~a 403 (451)
T PLN02410 336 EVLSHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERA 403 (451)
T ss_pred HHhCCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHH
Confidence 37888777555555 33 58999999999999875432 33333333 5676541 23477999999
Q ss_pred HHHHHHhc
Q 007247 546 VRRALATY 553 (611)
Q Consensus 546 i~~ll~~~ 553 (611)
|++++.+.
T Consensus 404 v~~lm~~~ 411 (451)
T PLN02410 404 VKRLMVEE 411 (451)
T ss_pred HHHHHcCC
Confidence 99999763
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=86.04 E-value=13 Score=39.03 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=62.2
Q ss_pred cEEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceE-EecccChHHHHHHHHHcc
Q 007247 403 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 403 ~~il~iGrl~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~-~~~~~~~~~~~~i~~~aD 478 (611)
.+++..|.-.+.|. .+...+.++.|.+++.+++++|...+.-.+..+++....+. ++. ..+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666556665 45667777777656789999986432222334444443321 232 234445566778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
++|-.-. |..=+ |.|.|+|+|+--
T Consensus 263 l~Vs~DS----Gp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 263 LFIGVDS----VPMHM-AAALGTPLVALF 286 (344)
T ss_pred EEEecCC----HHHHH-HHHcCCCEEEEE
Confidence 9996543 33333 789999999864
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=84.92 E-value=14 Score=40.54 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=75.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEE-eCCC-chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lviv-G~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..+.+..|.+... ..+.+-+.+.-|...+.+|+++ +... ......+++... +++.. +..|-.+. .+++.+++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCc
Confidence 4567778887542 3344444444444435566553 3211 111122222211 12222 23443332 48888886
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 480 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 480 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
.++-++ || ++.+||+.+|+|+|+-...+ ....+.+ -+.|..+..-..+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 665565 33 58999999999999976433 3334444 4677765100000 124778999999999976
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=84.70 E-value=4.9 Score=33.13 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=24.2
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecC
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 268 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~ 268 (611)
+.| |||.|...+.+..-.+.... ..|.|.|||-|+.
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 589 99999766555443333221 1599999999943
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.45 E-value=17 Score=40.22 Aligned_cols=141 Identities=12% Similarity=0.006 Sum_probs=72.2
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEE-EeCCCc------hhHHHHHHHHHHCCCceEEecccChHHHH
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (611)
+..+.+..|.... .+.+..++++++.+ +..|++ ++.... .+.+.+++.. .+.++....+.+..
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~--~~~g~~v~~w~PQ~--- 356 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT--KGKGLIIRGWAPQV--- 356 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh--ccCCEEEecCCCHH---
Confidence 3467777888753 33344444554444 445444 332110 0111111111 12334433333332
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceec-CcceEEeccccccc-ccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDC-EAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~-~~v~~~d~~~la~~ 545 (611)
.+++.+++-++-++. =-++++||+.+|+|+|+-...+ ....+.+ -+.|+-++.-.. . ..-+.-+.++++++
T Consensus 357 ~iL~h~~v~~fvtH~--G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~l~~a 433 (482)
T PLN03007 357 LILDHQATGGFVTHC--GWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKL-VKVKGDFISREKVEKA 433 (482)
T ss_pred HHhccCccceeeecC--cchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccc-cccccCcccHHHHHHH
Confidence 488888876666652 1368999999999999976433 2222211 133443210000 0 00022468999999
Q ss_pred HHHHHHh
Q 007247 546 VRRALAT 552 (611)
Q Consensus 546 i~~ll~~ 552 (611)
|++++.+
T Consensus 434 v~~~m~~ 440 (482)
T PLN03007 434 VREVIVG 440 (482)
T ss_pred HHHHhcC
Confidence 9999976
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=84.04 E-value=4 Score=45.34 Aligned_cols=139 Identities=17% Similarity=0.100 Sum_probs=76.6
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.+++..+.-+ .++..+++..|.+.. .+-.+.++++++++ +.++++.=.+.. ...+ +.++...-+
T Consensus 264 ~~~~~~~~~~-~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~-----~~~l----~~n~~~~~W 330 (500)
T PF00201_consen 264 EELWNFLDSS-GKKGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEP-----PENL----PKNVLIVKW 330 (500)
T ss_dssp HHHHHHTSTT-TTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSH-----GCHH----HTTEEEESS
T ss_pred cccchhhhcc-CCCCEEEEecCcccchhHHHHHHHHHHHHhhC---CCcccccccccc-----cccc----cceEEEecc
Confidence 3444444321 124456777888753 11244566666666 337887766531 1112 234543333
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHH
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.+.. ++++...+-++-++ |=-.+++||+.+|+|+|+-..-| ....+++.+.|.... ...-+.+
T Consensus 331 ~PQ~---~lL~hp~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~ 397 (500)
T PF00201_consen 331 LPQN---DLLAHPRVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEE 397 (500)
T ss_dssp --HH---HHHTSTTEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHH
T ss_pred ccch---hhhhcccceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHH
Confidence 3332 47877766665565 22357999999999999976422 344455556677651 1223568
Q ss_pred HHHHHHHHHHHh
Q 007247 541 AVSTTVRRALAT 552 (611)
Q Consensus 541 ~la~~i~~ll~~ 552 (611)
++.++|+++++|
T Consensus 398 ~l~~ai~~vl~~ 409 (500)
T PF00201_consen 398 ELRAAIREVLEN 409 (500)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhh
Confidence 999999999997
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.74 E-value=5.6 Score=40.29 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCcccc-------cCHHHHHHHHHhccc--CCcEEEEEeCCCc---hhHHHHHHHHHHCCCceEEecccCh
Q 007247 400 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 400 ~~~~~il~iGrl~~~-------Kg~d~li~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
.+++.|++....... .....+++.+..+.+ ++.+|+|==.... .....+.++.. .. ++.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~-~~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LP-NVVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CC-CeEEEC--CC
Confidence 456788888887654 234455555555544 5788877443210 11123333322 12 222221 12
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 509 (611)
-.+..++..||.++.-+ +.+-+||+.+|+|||+-...
T Consensus 191 ~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 23457999999988554 47999999999999996543
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=82.33 E-value=22 Score=39.38 Aligned_cols=141 Identities=15% Similarity=0.043 Sum_probs=70.2
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEE-eCCCchh---HHHH-HHHHHHCCCceEEecccChHHHHHHH
Q 007247 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 402 ~~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
..+.+..|.+. ..+-+..++.+++.. +..++++ +...... ...+ +.......++... ..+-.+ . .++
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v-~~w~PQ-~-~iL 354 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLV-CGWAPQ-V-EIL 354 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeee-eccCCH-H-HHh
Confidence 35667778764 233456666666665 4566544 3211100 0000 0111111112222 233222 2 377
Q ss_pred HHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----ccc-ceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 475 AGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
+...+-.+-++ || ++.+||+++|+|+|+-...+ ... +++.-+.|+.+..-..+ +.-..-+.++++++|++
T Consensus 355 ~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~-~~~~~~~~~~l~~av~~ 430 (475)
T PLN02167 355 AHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS-AYGEIVKADEIAGAVRS 430 (475)
T ss_pred cCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc-ccCCcccHHHHHHHHHH
Confidence 77665444444 33 48999999999999876433 221 24444567654100000 00012367899999999
Q ss_pred HHHh
Q 007247 549 ALAT 552 (611)
Q Consensus 549 ll~~ 552 (611)
++.+
T Consensus 431 ~m~~ 434 (475)
T PLN02167 431 LMDG 434 (475)
T ss_pred HhcC
Confidence 9975
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=81.77 E-value=16 Score=38.52 Aligned_cols=110 Identities=16% Similarity=0.148 Sum_probs=63.0
Q ss_pred HHHHhCCCCCCCCcEEEEEcCc-ccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC----ceEE-
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KARG- 461 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl-~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~v~~- 461 (611)
+.+.+++.. .+..+++..|.- .+.|. .+.+.+.++.|.+.+++++++|+.. -.+..+++....+. ++..
T Consensus 170 ~~~~~~~~~-~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSS-ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCC-CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 344444421 123345566553 35665 3456777777655678999998654 22334444433321 1222
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
.+..+-.++..+++.||++|-.-. |..=+ |.|.|+|+|+--
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT----Gp~Hl-AaA~g~P~valf 287 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVALY 287 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC----hHHHH-HHHhCCCEEEEE
Confidence 233345566689999999995543 33322 788999999753
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=81.64 E-value=30 Score=38.18 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=73.0
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCch-hHHHH-HHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
+..+.+..|.... .+-...++.+++.+ +..|+++=..+.. ..+.+ +.+....+++.... .|-.+. ++++.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~-~W~PQ~--~IL~H 348 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQV--EILAH 348 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEE-EeCCHH--HHhcc
Confidence 3456677787642 33455566666655 3355554322110 00001 12222223334333 443332 37888
Q ss_pred ccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccc-eecCcceEEecc-cccccccCCccCHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 477 aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~~-~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..+..+-++ || ++.+||+.+|+|+|+-...+ .... +++-+.|+-++. ...+ .-..-+.+++.++|+++
T Consensus 349 ~~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~--~~~~v~~e~i~~av~~v 423 (468)
T PLN02207 349 KAVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH--SDEIVNANEIETAIRCV 423 (468)
T ss_pred cccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc--cCCcccHHHHHHHHHHH
Confidence 777666665 43 57899999999999976433 2232 222456663310 0000 00123678999999999
Q ss_pred HH
Q 007247 550 LA 551 (611)
Q Consensus 550 l~ 551 (611)
+.
T Consensus 424 m~ 425 (468)
T PLN02207 424 MN 425 (468)
T ss_pred Hh
Confidence 96
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=81.02 E-value=27 Score=38.39 Aligned_cols=139 Identities=5% Similarity=0.022 Sum_probs=74.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
..+.+..|.... -..+.+.+.+.-|...++-.++-.+......+.+.+.. .++++.... |-.+ . .+++..++.+
T Consensus 265 svvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~-W~PQ-~-~iL~H~~v~~ 338 (449)
T PLN02173 265 SVVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLK-WSPQ-L-QVLSNKAIGC 338 (449)
T ss_pred ceEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeC-CCCH-H-HHhCCCccce
Confidence 356777787653 23345555555553334333332111111111111111 134454443 4332 2 4888888777
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+-++. =.++++||+++|+|+|+-..-+ ....+.+. +.|+-+.. .+.+ ..-+.+++++++++++.+
T Consensus 339 FvtHc--GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~--~~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 339 FMTHC--GWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA--EKES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred EEecC--ccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee--cccC--CcccHHHHHHHHHHHhcC
Confidence 76762 2378999999999999976433 33344432 56665410 0000 012679999999999976
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=80.92 E-value=23 Score=39.23 Aligned_cols=135 Identities=9% Similarity=-0.056 Sum_probs=69.2
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCc-------hhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 402 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 402 ~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
..+.+..|.+.. .+-+..++++++.. +..++++-..+. ...+.+++... +.++....+.+. . .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ--~-~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQ--V-A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCH--H-H
Confidence 356677787743 22255555555554 556665543211 01111111111 122332233333 2 4
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----ccccee-cCcceEEecccccccccCCccCHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
++....+.++-++ +=-++.+||+++|+|+|+-...+ ....+. +-+.|..+.. +. -..-+.+++++++.
T Consensus 356 vL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~---~~--~~~~~~~~v~~~v~ 428 (477)
T PLN02863 356 ILSHRAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE---GA--DTVPDSDELARVFM 428 (477)
T ss_pred HhcCCCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc---CC--CCCcCHHHHHHHHH
Confidence 7776555444454 22358999999999999976432 333333 3367765410 00 01126789999999
Q ss_pred HHHH
Q 007247 548 RALA 551 (611)
Q Consensus 548 ~ll~ 551 (611)
+++.
T Consensus 429 ~~m~ 432 (477)
T PLN02863 429 ESVS 432 (477)
T ss_pred HHhh
Confidence 8884
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=80.61 E-value=2.6 Score=37.41 Aligned_cols=45 Identities=13% Similarity=0.040 Sum_probs=30.8
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+..++..+|+++--|..+..--.+-.++.+|+|+|+..+|.-.+
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 456788889999988865655556777888999999988887443
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 611 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 0.0 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 6e-53 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 7e-52 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 7e-52 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 3e-51 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 3e-49 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-11 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-11 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 3e-11 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 1e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 8e-06 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 1e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 7e-05 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 7e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 612 bits (1581), Expect = 0.0
Identities = 166/509 (32%), Positives = 245/509 (48%), Gaps = 51/509 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEF 60
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALS 115
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
AA + + D+V A+DW ++ P Y++ +
Sbjct: 116 LAAARIGAGVLPG--------WRPDMVH-AHDWQAAMTPVYMRYAE-----TPEIPSLLT 161
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IHNIA+QG+F F L LPA + I+ YN ++++K G+ + + TVS
Sbjct: 162 IHNIAFQGQFGANIFSKLALPAHA-FGMEGIEYYND------VSFLKGGLQTATALSTVS 214
Query: 325 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 382
P YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A+ +
Sbjct: 215 PSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAAN-LKN 272
Query: 383 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 442
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 273 RALNKKAVAEHFRIDDD-GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
Query: 443 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +
Sbjct: 332 ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391
Query: 503 PIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
P+VA TGGL DTV + TG Q PV + + +RR + Y
Sbjct: 392 PVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441
Query: 554 GTQAL-AEMMKNGMAQDLSWKGPAKKWEE 581
L +M K GM D+SW+ A +
Sbjct: 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAA 470
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 610 bits (1575), Expect = 0.0
Identities = 152/523 (29%), Positives = 241/523 (46%), Gaps = 56/523 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIEL 143
+ +L V +E+ P KTGGL DV+G LP A A+G + P + + D VV
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ H GV +D P + Y Y DN LRF+LL
Sbjct: 61 DTFA--GHITLLFGHYNGVGIYLIDAPHLYDR-----PGSPYHDTNLFAYTDNVLRFALL 113
Query: 204 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 263
E L+ P+ V A+DWH L P YL +P AK VF
Sbjct: 114 GWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVF 158
Query: 264 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323
+HN+AYQG F + LP F + ++ + I+++KAG+ +D + V
Sbjct: 159 TVHNLAYQGMFYAHHMNDIQLPWSF-FNIHGLEFNGQ------ISFLKAGLYYADHITAV 211
Query: 324 SPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379
SP YA+E+ + ++ ++ R+ + G++NG+D + W+P TD + +Y T
Sbjct: 212 SPTYAREITEPQ-FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT- 269
Query: 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 439
++ K K LQ +GL VD +P+ + RL QKG D++ A+P +++ Q+ +LG
Sbjct: 270 LEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGA 329
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G +++ YP + ++ +H I+ GAD IL+PSRFEPCGL QL+ ++Y
Sbjct: 330 GDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY 389
Query: 500 GTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550
GT+P+V TGGL DTV + +GF + + ++ +RRA
Sbjct: 390 GTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRAF 439
Query: 551 ATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 592
+ +L + + MA D SW+ AK + E L++
Sbjct: 440 VLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEHHH 482
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 450 bits (1159), Expect = e-154
Identities = 103/503 (20%), Positives = 178/503 (35%), Gaps = 86/503 (17%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L +G E P K GGL + L + ALA+ GH V+ P + +++ + +++
Sbjct: 3 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIR 57
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V+ + + + + +YG + +
Sbjct: 58 VFGEEVQVKVSYEERGNLRIYRIGGGLL-------DSEDVYG----PGWDGLIRKAVTFG 106
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
+A++ L DVV +DWHT +K +K VF
Sbjct: 107 RASVLLLNDLLREEPLP-------DVV-HFHDWHTVFAGALIKKYFKIP-------AVFT 151
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IH + A F L + Y I+ G +D+V TVS
Sbjct: 152 IHRLNKSKLPA-FYFHEAGLSE--------LAPYPD------IDPEHTGGYIADIVTTVS 196
Query: 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 384
Y + G + + I + NG+D WN ++
Sbjct: 197 RGYLIDE-----WGFFRN---FEGKITYVFNGIDCSFWNESYLT------------GSRD 236
Query: 385 LLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK----ENVQIIVLGT 439
K++L ++ G+ FIGR QKG D+L AI + ++ I++G
Sbjct: 237 ERKKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGK 293
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G +E LE + + + DF++IPS FEP GL+ L AM
Sbjct: 294 GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL 353
Query: 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559
G +PI ++ GGL D + TG D ++ + +AL +
Sbjct: 354 GAIPIASAVGGLRDIITNE-TGI---LV-------KAGDPGELANAILKALELSRSDLSK 402
Query: 560 -EMMKNGMAQDLSWKGPAKKWEE 581
A SW+ A+++ +
Sbjct: 403 FRENCKKRAMSFSWEKSAERYVK 425
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 2e-90
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 352 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 411
G NG+D WN ++ K++L ++ G+ FIGR
Sbjct: 1 GSHNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDEG---VTFMFIGRF 45
Query: 412 -EEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466
QKG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLS 105
Query: 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 526
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D + TG
Sbjct: 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL--- 161
Query: 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 572
V D ++ + +AL L++ +N + +S+
Sbjct: 162 -------VKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 199
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 62/295 (21%)
Query: 298 YNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
+N + + GI +SD+V VS E EL + I+ + N
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH-------ELVKPNKD--IQTVYNF 187
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
+D + + L+ E G+ ++ I + K
Sbjct: 188 IDERVYFKRD--------------------MTQLKKEYGISESE--KILIHISNFRKVKR 225
Query: 417 SDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF--NIPLA 470
+ A + E + +++++G G P + QL K + F
Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDG--PEFCTILQLV-----KNLHIEDRVLFLGKQDNV 278
Query: 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 529
++A +D +L+ S E GL+ L AM G VP + + GG+ + ++ G TG+
Sbjct: 279 AELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVIQHGDTGY------- 330
Query: 530 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA---QDLSWKGPAKKWEE 581
+ D V+ + L + M + + + ++E
Sbjct: 331 ---LCEVGDTTGVADQAIQLLKD--EELHRNMGERARESVYEQFRSEKIVSQYET 380
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 51/279 (18%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
+S ++ ++ + + E + + G+
Sbjct: 136 KSTKLMMLTDKQIADFQ--KHYQTEPERFQI------LPPGIYPDRKYS----------- 176
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 435
+ P +E + + G+ + ++ +G +KG D A+ +
Sbjct: 177 -----EQIPNSREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT 229
Query: 436 VLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHM--IIAGADFILIPSRFEPCG 490
+L + ++ E L + GV F + ++A AD +L P+ E G
Sbjct: 230 LLFVVGQDKPRKFEALA-----EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAG 284
Query: 491 LIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
++ L A+ G P++ + G + + G + +P ++ +R+A
Sbjct: 285 IVLLEAITAGL-PVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKA 334
Query: 550 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 586
L + +N A +K + +
Sbjct: 335 LTQ--SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-22
Identities = 61/279 (21%), Positives = 104/279 (37%), Gaps = 61/279 (21%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
+D++ + Q+L+ + D I + G DV+ ++P D+
Sbjct: 184 NADVLAVNTQEEMQDLM--HHYDADPDRISV------VSPGADVELYSPGNDR------- 228
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----N 431
E + E+G+P+ V+ F+GRL+ KG +L A+ N
Sbjct: 229 ----------ATERSRRELGIPLHT--KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276
Query: 432 VQIIVLG--TGKKPMEKQLEQLEILYPEKARGVAK---FNIPLAH----MIIAGADFILI 482
+++I+ G +G + + GV K F P + AD + +
Sbjct: 277 LRVIICGGPSGPNATPDTYRHMA-----EELGVEKRIRFLDPRPPSELVAVYRAADIVAV 331
Query: 483 PSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541
PS E GL+ + A GT P++A+ GGL V EG TG VD A
Sbjct: 332 PSFNESFGLVAMEAQASGT-PVIAARVGGLPIAVAEGETGL----------LVDGHSPHA 380
Query: 542 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKK 578
+ + L + M ++ A+ SW A +
Sbjct: 381 WADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQ 417
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 2e-20
Identities = 73/506 (14%), Positives = 147/506 (29%), Gaps = 113/506 (22%)
Query: 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159
GG + + ALA G +V I R + KD + E+ + KVR
Sbjct: 32 FGGQLVYVKEVSLALAEMGVQV-DIITR--RIKDENWPEFSGEIDYYQETNKVR------ 82
Query: 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSN 219
+ R+ FL K +L + L + +
Sbjct: 83 --IVRIPFGGDKFLPK--------------------EEL-WPYLHEYVNKIINFYREEGK 119
Query: 220 KYFSGPYGEDVVFVANDWHTSLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFED 278
VV + L LK + P F H++ Q
Sbjct: 120 FP-------QVV-TTHYGDGGLAGVLLKNIKGLP--------FTFTGHSLGAQKM----- 158
Query: 279 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338
L + + + + R I + + +D ++ + S +
Sbjct: 159 ---EKLNVNTSNFKEMDERFKFHRR---IIAERLTMSYADKIIVSTSQERFGQYSHDLYR 212
Query: 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398
++ I G++ + ++ K + + L+ ++G
Sbjct: 213 GAVNVEDDDK-FSVIPPGVNTRVFDGEYGD------------KIKAKITKYLERDLGSE- 258
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ-IIVLGTGKKPMEKQLEQLEILY 455
+P I RL+++K L A + + ++ L + P E +
Sbjct: 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEK 318
Query: 456 PE--------KARGVA-KFNIPLAHM----------IIAGADFILIPSRFEPCGLIQLHA 496
K ++ + + + + S +EP GL + A
Sbjct: 319 EILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEA 378
Query: 497 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555
M G P V + GG + ++ G G VDP D ++ + +A +
Sbjct: 379 MASGL-PAVVTRNGGPAEILDGGKYGV----------LVDPEDPEDIARGLLKAFES--E 425
Query: 556 QALAEMMKNGM---AQDLSWKGPAKK 578
+ + + G + +W+ A+
Sbjct: 426 ETWSAYQEKGKQRVEERYTWQETARG 451
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 3e-20
Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 71/286 (24%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
E D++ +S + + + +G+DV+ + P
Sbjct: 140 EVDVLTYISQYTLRRFK---SAFGSHPTFEH------LPSGVDVKRFTP----------- 179
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQ 433
A P K A + ++G PVI RL +KG D L A+P I + Q
Sbjct: 180 ------ATPEDKSATRKKLGFTDTT--PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231
Query: 434 IIVLGTGKKPMEKQLEQLEILYPEKARGVAK-----FNIPLAHM--IIAGADFILIPSR- 485
++++G+G E L +L A V++ + M +A AD +P+R
Sbjct: 232 LLIVGSG--RYESTLRRL-------ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPART 282
Query: 486 ------FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
E G++ L A G VP++A +GG +TV TG V+ D
Sbjct: 283 RGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPA-TGL----------VVEGSD 330
Query: 539 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 581
V +S + L A M G + + SW+ ++
Sbjct: 331 VDKLSELLIELLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTN 374
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 5e-18
Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 52/232 (22%)
Query: 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 366
+++ + + D + P Y Q + + + +D
Sbjct: 166 WEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVI-------------MPPSIDPLSEKN-- 210
Query: 367 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 426
++ K + + ++ P+I + R + KG +
Sbjct: 211 -------------VELKQTEILRILERFDVDPEK--PIITQVSRFDPWKGIFDVIEIYRK 255
Query: 427 FIKE--NVQIIVLGTG-------KKPMEKQLEQLEILYPEKARGVAK------FNIPLAH 471
++ VQ++++G EK L ++ + V + +
Sbjct: 256 VKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG-----EDYDVKVLTNLIGVHAREVN 310
Query: 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 522
+D IL S E GL AM G P++ GG+ + +G TGF
Sbjct: 311 AFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGRAVGGIKFQIVDGETGF 361
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 86.2 bits (213), Expect = 1e-17
Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 38/257 (14%)
Query: 350 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 409
+ G D+ + P T++ + S + + + + + D+ P++ +
Sbjct: 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEI-EELLYSDVENKEHLCVLKDKKKPILFTMA 579
Query: 410 RLEEQKGSDILAAAIPHFIK--ENVQIIVLG---------TGKKPMEKQLEQLEILYPEK 458
RL+ K L + E ++V+G +K K++ L Y K
Sbjct: 580 RLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY--K 637
Query: 459 ARGVAKF---------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509
G ++ N L I + P+ +E GL + AM G G
Sbjct: 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697
Query: 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGM- 566
G + + G +GF +DP + T+ E+ K G+
Sbjct: 698 GPAEIIVHGKSGF----------HIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747
Query: 567 --AQDLSWKGPAKKWEE 581
+ +W+ +++
Sbjct: 748 RIEEKYTWQIYSQRLLT 764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 9e-15
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 40/190 (21%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKAR- 460
I +GR +K +L A+ + ++ +++ G G P EK+++ L A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG--PDEKKIKLL-------AQK 53
Query: 461 -GVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST--GG 510
GV + I+ + + E + L A+ G VP++A++
Sbjct: 54 LGVKAEFGFVNSNELLE---ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 511 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQ 568
+ + +P + +S + L M A
Sbjct: 111 TRQFALDERSL------------FEPNNAKDLSAKIDWWLEN--KLERERMQNEYAKSAL 156
Query: 569 DLSWKGPAKK 578
+ + + +
Sbjct: 157 NYTLENSVIQ 166
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 49/286 (17%), Positives = 82/286 (28%), Gaps = 91/286 (31%)
Query: 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 368
++ + + VS + + I NG+DV +
Sbjct: 153 ILRPYHEKIIGRIAVSDLARRWQMEALGSDAVE-----------IPNGVDVASFAD---- 197
Query: 369 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHF 427
A + R + F+GR E +KG +L AA+P
Sbjct: 198 -----------------------APLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234
Query: 428 IKE--NVQIIVLGTGKKPMEKQLEQLEIL-----------YPEKARGVAKFNIPLAHMII 474
+ +V+I+++G G ++ EQ L KA +
Sbjct: 235 VARFPDVEILIVGRG--DEDELREQAGDLAGHLRFLGQVDDATKAS------------AM 280
Query: 475 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 532
AD P E G++ + AM GT +VAS + +G G
Sbjct: 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVLADGDAGR---------- 329
Query: 533 AVDPVDVAAVSTTVRRAL------ATYGTQALAEMMKNGMAQDLSW 572
V D ++ + L A Y +A W
Sbjct: 330 LVPVDDADGMAAALIGILEDDQLRAGYVARASER------VHRYDW 369
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 74.1 bits (181), Expect = 6e-14
Identities = 31/251 (12%), Positives = 70/251 (27%), Gaps = 47/251 (18%)
Query: 183 KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242
I P + ++ + L +V ++W +
Sbjct: 147 GIPSPENDFET-NDAILLGYTVAWFLGE----------VAHLDSQHAIVAHFHEWLAGVA 195
Query: 243 PCYLKTMYKPKGMYKSAKVVFCIH------NIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
+ +F H + G F F + L + D
Sbjct: 196 LPLCRKRRID------VVTIFTTHATLLGRYLCASGSFDFYN----CLES-----VDVDH 240
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
+ + +A +D+ TVS A E ++++++ + NG
Sbjct: 241 EAGRFGIYHRYCIERAAAHSADVFTTVSQITAF----------EAEHLLKRKPDGILPNG 290
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQK 415
++V ++ + + D ++ +D + GR E + K
Sbjct: 291 LNVIKFQAFHEFQNLHALKKEKINDF---VRGHFHGCFDFDLDNTLYFF-IAGRYEYKNK 346
Query: 416 GSDILAAAIPH 426
G+D+ A+
Sbjct: 347 GADMFIEALAR 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 30/318 (9%)
Query: 286 AQFKSSFDFI--DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 343
F FDF + + GR K G DM + L K +
Sbjct: 319 GHFHGCFDFDLDNTLYFFIAGRYEYKNK-GA---DMFIEALARLNYRLKVSGSKKTVVAF 374
Query: 344 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL---LKEALQAEVG-LPVD 399
I+ ++ + ++ +T + + ++ LP D
Sbjct: 375 IVMPAKNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432
Query: 400 RNI------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI 453
V+ L ++ L + H + ++ ++L ++ +
Sbjct: 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492
Query: 454 ---LYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510
+PE + G + PS +EP G G I + G
Sbjct: 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552
Query: 511 LVDTVEEGFTGFQM---GSFSVDCEAVDPVDVA-AVSTTVRRALATYGTQALAEMMKNG- 565
+E+ Q G + VD P + + + + Q +N
Sbjct: 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ--RINQRNAT 610
Query: 566 --MAQDLSWKGPAKKWEE 581
++ L WK ++ +
Sbjct: 611 EALSDLLDWKRMGLEYVK 628
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 8e-11
Identities = 19/224 (8%), Positives = 68/224 (30%), Gaps = 25/224 (11%)
Query: 365 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAA 423
L + Y+ + +P + L+ + + +I GR ++ ++ A
Sbjct: 205 LKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNAFTLIVEA 263
Query: 424 IPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM--IIAGAD 478
+ F++ + + ++ G+K + L + + + L ++ +
Sbjct: 264 LKIFVQKYDRSNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSS 316
Query: 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
+ L +G ++ + D ++ ++
Sbjct: 317 IGISLMISPHPSYPPLEMAHFGL-RVITNKYENKDLSNWHSNIVS----------LEQLN 365
Query: 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 582
++ T+ ++ + + + + M ++ +E
Sbjct: 366 PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 2e-10
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 394 VGLPVDRNI-------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK 446
PV+ + + R+ +K ++ ++ ++ ++G
Sbjct: 8 HSHPVETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWF--SKGD 63
Query: 447 QLEQLEILYPEKARGVAKF--NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTV 502
E+ + A KF ++ +I + +L ++ E GL + AM G
Sbjct: 64 HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK- 122
Query: 503 PIVAS-TGGLVDTVEEGFTGF 522
P++A GG +TV TG+
Sbjct: 123 PVIAVNEGGFKETVINEKTGY 143
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-09
Identities = 56/397 (14%), Positives = 104/397 (26%), Gaps = 54/397 (13%)
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
++ I + ++++ + ++ F GL K D
Sbjct: 31 HEVIVFGIHAFGRSVHANIEEFD----AQTAEHVRGLNEQGFYYSGLSEFIDVHK--PDI 84
Query: 295 IDGYNKP-VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
+ YN P V G + M + +VL V +N+ +
Sbjct: 85 VMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR----------ENLWWIFSHPKV 134
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
V M + + G K + V + VGL + + + R
Sbjct: 135 VGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNT 194
Query: 413 EQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470
+K DI A FI + + ++ L + L + + + F
Sbjct: 195 ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254
Query: 471 HMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517
MI D I+ S E GL G I+++ GG D
Sbjct: 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314
Query: 518 GF----------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG- 565
+ +D D+ A + + + K
Sbjct: 315 DCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVE-------AFTFFKDEKNRKEYGKRVQ 367
Query: 566 --MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 600
+ +W + + +L S EE
Sbjct: 368 DFVKTKPTWDDISSDIIDFFNSLLRVESRETPGNEEH 404
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 18/170 (10%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462
+ F+GR+ KG+ AA ++++ G + +++ Y +
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPA--WEPEYFDEITRRYGSTVEPI 217
Query: 463 AKFNIPLAHMIIAGADFILIPSRF----------EPCGLIQLHAMRYGTVPIVAS-TGGL 511
+ ++A A +L S+ EP + A GT P+V + G L
Sbjct: 218 GEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCL 276
Query: 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR-ALATYGTQALAE 560
+ V G+ EA + S VRR A+ +G +AE
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAE 326
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 51/368 (13%), Positives = 106/368 (28%), Gaps = 96/368 (26%)
Query: 41 RSLNIIDDLQ----VKTMASK---LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTE 93
L ++ ++Q L T+R + + + + ++ E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 94 V----APW--SKTGGL-GDVLGGLPPALAANGHRVMTIAPRYDQYK--DAWDTDVVIELK 144
V + + L +VL P L+ + +D +K + +IE
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWF----LAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
+ + +E + R VF L+ +W D +
Sbjct: 363 L-NVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFD-----------VIKSDVMVVV 408
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVF---VANDW--HTSLIPCY-LKTMYKPKG 254
+ L + +L + + + + N++ H S++ Y + +
Sbjct: 409 NKLHKYSL-----VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 255 M-------YKSAKVVFCIHNIAY-------QGRFA-----FEDF---------------- 279
+ Y F H I + R F DF
Sbjct: 464 LIPPYLDQY------FYSH-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 280 --GLLNLPAQFKSSFDFI-DGYNKPVRGRKINWMKAGILESDMVLTVSPH--YAQELVSG 334
+LN Q K +I D N P R +N + + + + L S + + +
Sbjct: 517 SGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Query: 335 EDKGVELD 342
ED+ + +
Sbjct: 575 EDEAIFEE 582
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 611 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.96 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.95 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.94 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.86 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.83 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.81 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.79 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.78 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.69 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.65 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.64 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.56 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.53 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.53 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.48 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.46 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.45 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.24 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 99.13 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.1 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.91 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.88 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.79 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.72 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.15 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.47 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.23 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 96.48 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 95.87 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.08 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 94.37 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 94.19 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 93.63 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 93.16 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 91.17 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 89.49 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 86.43 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-83 Score=707.77 Aligned_cols=530 Identities=71% Similarity=1.192 Sum_probs=458.6
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
...||||||++|++|+.|+||+++++..|+++|+++||+|.||+|.|++..+.++......+.+.+..+.+++++...+|
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 86 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG 86 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence 45799999999999999999999999999999999999999999999999888888888889999999999999999999
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
|+++++++|.++.+.++..++.+|++..|.+|.|+..||.+|+++++++++.+.....+++.+..++|+|+|+|||++++
T Consensus 87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l 166 (536)
T 3vue_A 87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP 166 (536)
T ss_dssp EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence 99999999999999999999999999999999999999999999999999999888778888887887799999999999
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
+|.+++..+...+.+.++|+|+|+||+.+||.|+...+..++++..+.....+...+..+.....+++++.++..||.|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999998888788889999999999999999999999999998887776666677776777788999999999999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 401 (611)
|||+.+++++.....+|..++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|...+..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766677777777777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
.|+|+|+||+.++||++.|++|++++.+++++|+|+|.|+......++.+...+++++.+.+.++.+..+.+|++||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999999999999999999999999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||++|+||++++|||+||+|||+|++||+.|+|.|+.|||+++..+.++.+|++.|+++|+++|.++++.++.+.+.++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987667789999
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHcCCCCCCCCCCcccchhhhcCCC
Q 007247 562 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 611 (611)
Q Consensus 562 ~~~~~~~~fsw~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (611)
++++++++|||+.++++|+++|+++...++.|+.++++++|+++|++|||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888999999999999999999998
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-50 Score=437.95 Aligned_cols=463 Identities=32% Similarity=0.576 Sum_probs=349.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEE-E-EeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIE-L-KVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~gv 162 (611)
|||++|+.+|+|+...||++.++..|+++|+++||+|+|+++.++.....+....... . ..++ ...+.+...+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 8999999998886568999999999999999999999999987643222211111000 0 0000 122233335799
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
.++++..+.++.+ . ..+|+...+.+|.++..++..+...+.++++.+.. ..+|| |||+|+|.++++
T Consensus 78 ~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~D-ivh~~~~~~~~~ 143 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----P-GSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP--------FWRPD-VVHAHDWHAGLA 143 (485)
T ss_dssp EEEEEECHHHHCC----S-SCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST--------TCCCS-EEEEETGGGTTH
T ss_pred EEEEEeChhhccC----C-CCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc--------CCCCC-EEEeeccchhHH
Confidence 9998876544432 0 01455444555777877887777777777665431 02699 999999988887
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
+.+++... .++|+|+++|+..+++.++...+..++++..++.. ... .......+++..+..+|.+++
T Consensus 144 ~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 144 PAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HGL---EFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp HHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TTT---EETTEEEHHHHHHHHCSEEEE
T ss_pred HHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----ccc---cccccccHHHHHHHhcCeEEe
Confidence 77766211 48999999999876655544334333444332110 000 001123567788899999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhh--hc--cceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
+|+..++.+.+. .+|..++.++ +. .++.+||||+|.+.|.|..++.+..+|+..++ ..+...+..+++++|++.
T Consensus 211 ~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~ 288 (485)
T 2qzs_A 211 VSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLKV 288 (485)
T ss_dssp SSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCCC
T ss_pred cCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCCC
Confidence 999999988641 1232211111 11 48999999999999998877777778877765 466677888999999986
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+.+.++++..++++++..+.++..+.+..+|+.||
T Consensus 289 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 289 DDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp CTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCC
Confidence 55678999999999999999999999999777999999999986688899999988877787666678787788999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC---------cceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ +++|+++++++|.++
T Consensus 369 v~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~l 438 (485)
T 2qzs_A 369 VILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRA 438 (485)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHHH
T ss_pred EEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 899987 999999999999999
Q ss_pred HHhc-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 550 LATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 550 l~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
++.+ +++.+.+++++++.++|||+.++++|+++|+++...
T Consensus 439 l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 439 FVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHTSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHcCCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhh
Confidence 9411 277888999998889999999999999999998654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-50 Score=439.57 Aligned_cols=464 Identities=35% Similarity=0.571 Sum_probs=351.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEE-EEEeCCeeeEEEEEEeeecCce
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....++..... +..+.. ....+..+...+|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLL-GEKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSS-SCCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEec-CCeEEEEEEEecCce
Confidence 899999999988645799999999999999999999999998764322211111000 100000 001233334457999
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHh-ccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
+++++.+.++.+ . ..+|+...+.+|.++..++..+...+.++++.+ .. .+|| |||+|+|.++++
T Consensus 80 v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~D-iIh~~~~~~~~~ 144 (485)
T 1rzu_A 80 LLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPG---------WRPD-MVHAHDWQAAMT 144 (485)
T ss_dssp EEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSS---------CCCS-EEEEEHHHHTTH
T ss_pred EEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhccC---------CCCC-EEEecccchhHH
Confidence 998876544432 0 125554445667788888888888777777654 21 2699 999999888877
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
+.+++... ..++|+|+++|+..+++.++...+..++++..++.. +.. .......+++..+..+|.+++
T Consensus 145 ~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi~ 212 (485)
T 1rzu_A 145 PVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EGI---EYYNDVSFLKGGLQTATALST 212 (485)
T ss_dssp HHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TTT---EETTEEEHHHHHHHHCSEEEE
T ss_pred HHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----ccc---cccccccHHHHHHhhcCEEEe
Confidence 77776531 048999999999877666554444444444433210 000 000123567888899999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+|+..++.+.+. .+|..++.++ ...++.+|+||+|.+.|.|..+..+..+|+..++ .++...+..+++++|++.+
T Consensus 213 ~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~- 289 (485)
T 1rzu_A 213 VSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDD- 289 (485)
T ss_dssp SCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCS-
T ss_pred cCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCC-
Confidence 999999988741 0221111111 2348999999999999998877777777877764 5666678889999999854
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+.+.++++..++++++..+.+++.+.+..+|+.||++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~ 369 (485)
T 1rzu_A 290 GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAI 369 (485)
T ss_dssp SSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEE
Confidence 24699999999999999999999999977899999999998668889999998887778866677888878899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC---------cceEEecccccccccCCccCHHHHHHHHHHHH-
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL- 550 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll- 550 (611)
++||.+|+||++++|||+||+|||+++.||+.|++.++ .+|+++ +++|+++++++|.+++
T Consensus 370 v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~ 439 (485)
T 1rzu_A 370 IIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVR 439 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHH
T ss_pred EECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 899987 9999999999999999
Q ss_pred --HhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007247 551 --ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 591 (611)
Q Consensus 551 --~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~~ 591 (611)
++ ++.+.+++++++.++|||+.++++|+++|++++..++
T Consensus 440 ~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 440 YYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp HHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC---
T ss_pred HhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCC
Confidence 45 7888899999888999999999999999999876543
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-47 Score=408.73 Aligned_cols=423 Identities=24% Similarity=0.332 Sum_probs=326.4
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
++|||++|+.+|+| ...||++.++..|+++|+++||+|+|+++.++...+.. .....+ .+.....+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE--IGKIRV--FGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE--EEEEEE--TTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh--hccccc--cCcccceeeeeccCCCc
Confidence 37999999999888 46899999999999999999999999999876544321 111222 23445566666678999
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcch-HHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~-~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
+++.++. .++.+ ..+|+. +.++ ..++..+.+.+.++++.+..+ ..+|| |||+|++...+
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~D-ii~~~~~~~~~ 135 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLRE-------EPLPD-VVHFHDWHTVF 135 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTTT-------SCCCS-EEEEESGGGHH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhcc-------CCCCe-EEEecchhhhh
Confidence 9999987 44443 234432 5566 677788888888888776110 13699 99999998888
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
++.+++.. .++|+|+++|+...... +...+.. .............+++..++.+|.++
T Consensus 136 ~~~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ad~ii 193 (439)
T 3fro_A 136 AGALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHE--------------AGLSELAPYPDIDPEHTGGYIADIVT 193 (439)
T ss_dssp HHHHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHH--------------TTCGGGCCSSEECHHHHHHHHCSEEE
T ss_pred hHHHHhhc-------cCCCEEEEecccccccC-chHHhCc--------------cccccccccceeeHhhhhhhhccEEE
Confidence 88887755 48999999998654221 1000000 00000001122357788899999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 401 (611)
++|+.+++.... .++.. ..++.+||||+|.+.|.|... ...+...+..+++++|++. +
T Consensus 194 ~~S~~~~~~~~~--~~~~~------~~~i~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~--~ 251 (439)
T 3fro_A 194 TVSRGYLIDEWG--FFRNF------EGKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMDE--G 251 (439)
T ss_dssp ESCHHHHHHTHH--HHGGG------TTSEEECCCCCCTTTSCGGGS------------CSCHHHHHHHHHHHHTCCS--C
T ss_pred ecCHHHHHHHhh--hhhhc------CCceeecCCCCCchhcCcccc------------cchhhhhHHHHHHHcCCCC--C
Confidence 999999887432 11222 348999999999998876521 1233456788999999863 3
Q ss_pred CcEEEEEcCcc-cccCHHHHHHHHHhccc----CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 402 IPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 402 ~~~il~iGrl~-~~Kg~d~li~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
++|+|+||+. +.||++.+++|++++.+ ++++|+|+|+|+..+.+.++++..++++.+.+.+..+.+.+..+++.
T Consensus 252 -~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 -VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp -EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT
T ss_pred -cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHH
Confidence 8999999999 99999999999999977 68999999999977789999999998854445555788888899999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH-hcCH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGT 555 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~~ 555 (611)
||++++||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ +++|+++++++|.++++ + +
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~--~ 397 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS--R 397 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--T
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--H
Confidence 999999999999999999999999999999999999999887 99987 99999999999999999 6 4
Q ss_pred HHHHHHHHHHHH--hhCCchHHHHHHHHHHHHHHH
Q 007247 556 QALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 556 ~~~~~~~~~~~~--~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+.+.++++++.. ++|||+.++++|+++|++++.
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 398 SDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 555566666543 789999999999999999875
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=362.48 Aligned_cols=404 Identities=18% Similarity=0.238 Sum_probs=282.7
Q ss_pred CCccccccCCCceEEEEeeeecCcc-----ccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCe
Q 007247 74 GPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDK 148 (611)
Q Consensus 74 ~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~ 148 (611)
++.....++++|||++|+.+|+|.. ..||.+.++..|+++|+++||+|+++++........
T Consensus 10 ~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-------------- 75 (438)
T 3c48_A 10 HSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE-------------- 75 (438)
T ss_dssp ---------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS--------------
T ss_pred cccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc--------------
Confidence 3445555677899999999888842 369999999999999999999999999874321110
Q ss_pred eeEEEEEEeeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHh-hHHhccCCCCCCCCCCC
Q 007247 149 IEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYG 227 (611)
Q Consensus 149 ~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 227 (611)
. .....|+.++.+....+... . .......+..+...++.. ++... +
T Consensus 76 ---~---~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 122 (438)
T 3c48_A 76 ---I---VRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREKV-----------T 122 (438)
T ss_dssp ---E---EEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHTC-----------C
T ss_pred ---c---ccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhccC-----------C
Confidence 0 01234666666643211100 0 000011112233333333 22221 4
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
|| |||+|++...+++..+... .++|+|+++|+........ +...... ......
T Consensus 123 ~D-iv~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~------~~~~~~~-------------~~~~~~ 175 (438)
T 3c48_A 123 YD-LIHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY------RDDSDTP-------------ESEARR 175 (438)
T ss_dssp CS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-------------HHHHHH
T ss_pred CC-EEEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc------ccccCCc-------------chHHHH
Confidence 99 9999987766666555554 3899999999754311000 0000000 000012
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+.+..++.+|.++++|+..++.+.+ .+|++.+ ++.+|+||+|...|.+.... ..
T Consensus 176 ~~~~~~~~~~d~ii~~s~~~~~~~~~--~~g~~~~------k~~vi~ngvd~~~~~~~~~~-----------------~~ 230 (438)
T 3c48_A 176 ICEQQLVDNADVLAVNTQEEMQDLMH--HYDADPD------RISVVSPGADVELYSPGNDR-----------------AT 230 (438)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH--HHCCCGG------GEEECCCCCCTTTSCCC---------------------C
T ss_pred HHHHHHHhcCCEEEEcCHHHHHHHHH--HhCCChh------heEEecCCccccccCCcccc-----------------hh
Confidence 23466788999999999999999875 2455433 89999999999888765321 12
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeC----CCchhHHHHHHHHHHCC--C
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP--E 457 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~--~ 457 (611)
..++++++++. +.++|+|+||+.++||++.+++|++++.+ + +++|+|+|+ |+ +.+.++++..+++ +
T Consensus 231 ~~~r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~~ 306 (438)
T 3c48_A 231 ERSRRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVEK 306 (438)
T ss_dssp HHHHHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCTT
T ss_pred hhhHHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCCC
Confidence 34788888863 45899999999999999999999999975 3 799999998 54 5566777766643 5
Q ss_pred ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCcc
Q 007247 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 458 ~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~ 537 (611)
++.+.+..+.+.+..+|+.||++++||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ +++
T Consensus 307 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~ 376 (438)
T 3c48_A 307 RIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------DGH 376 (438)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------SSC
T ss_pred cEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------CCC
Confidence 7888888888888899999999999999999999999999999999999999999999999999987 899
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHcCCC
Q 007247 538 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGSE 592 (611)
Q Consensus 538 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~~~~ 592 (611)
|+++++++|.+++++ ++.+.++++++. .++|||+.++++|+++|++++.....
T Consensus 377 d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 377 SPHAWADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp CHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhccc
Confidence 999999999999997 777777776663 23499999999999999999986543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=364.18 Aligned_cols=411 Identities=15% Similarity=0.123 Sum_probs=287.4
Q ss_pred CceEEEEeeeecCcc---------ccccHHHHhccchHHHHhCCCeEEEEeecCCccc-ccCCCceEEEEEeCCeeeEEE
Q 007247 84 GLNILFVGTEVAPWS---------KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~---------~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (611)
+|||++|+..++|.. ..||.+.++.+|+++|+++||+|+|+++...... ..+... .
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~-------------~- 72 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE-------------I- 72 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS-------------E-
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh-------------H-
Confidence 599999999887742 4699999999999999999999999998643211 110000 0
Q ss_pred EEEee--ecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeE
Q 007247 154 FFHCH--KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVV 231 (611)
Q Consensus 154 ~~~~~--~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvi 231 (611)
... ..|+.++.+....... .. ....+..+..+...+.++++.... +|| |
T Consensus 73 --~~~~~~~gv~v~~~~~~~~~~----------~~------~~~~~~~~~~~~~~l~~~l~~~~~----------~~D-i 123 (499)
T 2r60_A 73 --DYYQETNKVRIVRIPFGGDKF----------LP------KEELWPYLHEYVNKIINFYREEGK----------FPQ-V 123 (499)
T ss_dssp --EECTTCSSEEEEEECCSCSSC----------CC------GGGCGGGHHHHHHHHHHHHHHHTC----------CCS-E
T ss_pred --HhccCCCCeEEEEecCCCcCC----------cC------HHHHHHHHHHHHHHHHHHHHhcCC----------CCC-E
Confidence 001 2466666654321100 00 000001111223334444444211 599 9
Q ss_pred EEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCC-cccccccccccCCCCCCCCcchhHh
Q 007247 232 FVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWM 310 (611)
Q Consensus 232 vh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (611)
||+|.+..++++..+... .++|+|+++|+..+..... +...+.. ..+.. .+. ......+.
T Consensus 124 vh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~------~~~---~~~~~~~~ 184 (499)
T 2r60_A 124 VTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDE------RFK---FHRRIIAE 184 (499)
T ss_dssp EEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHH------HHC---HHHHHHHH
T ss_pred EEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhh------hHH---HHHHHHHH
Confidence 999987666666655554 3899999999764321100 0000000 00000 000 00011234
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCC-c----ccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (611)
+..++.+|.++++|+..++.+.+...+| + .. .++.+||||+|...|.+... ..
T Consensus 185 ~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~------~ki~vi~ngvd~~~~~~~~~----------------~~ 242 (499)
T 2r60_A 185 RLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDD------DKFSVIPPGVNTRVFDGEYG----------------DK 242 (499)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCG------GGEEECCCCBCTTTSSSCCC----------------HH
T ss_pred HHHHhcCCEEEECCHHHHHHHHhhhcccccccccCC------CCeEEECCCcChhhcCccch----------------hh
Confidence 6678899999999999999887520034 3 32 38999999999988876532 12
Q ss_pred HHHHHHHHhC-----CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-CcEEEEEeCCCc-------------hh
Q 007247 386 LKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGTGKK-------------PM 444 (611)
Q Consensus 386 ~~~~~~~~~g-----l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~-~~~lvivG~g~~-------------~~ 444 (611)
.+..+++++| ++. +.++|+|+||+.++||++.+++|++++.+ + .++|+|+|+++. .|
T Consensus 243 ~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y 320 (499)
T 2r60_A 243 IKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEI 320 (499)
T ss_dssp HHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHH
T ss_pred hHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHH
Confidence 3456777777 653 45899999999999999999999999975 2 468999998321 12
Q ss_pred HHHHHHHHHHCC--CceEEecccChHHHHHHHHHc----cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC
Q 007247 445 EKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 518 (611)
Q Consensus 445 ~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g 518 (611)
.+.++++..+++ +++.+.+..+.+.+..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.++
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~ 400 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGG
T ss_pred HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCC
Confidence 677888877654 568888888888888999999 99999999999999999999999999999999999999999
Q ss_pred cceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHcCCC
Q 007247 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAGSE 592 (611)
Q Consensus 519 ~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~~~~ 592 (611)
.+|+++ +++|+++++++|.+++++ ++.+.++++++. .++|||+.++++|+++|++++.....
T Consensus 401 ~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 401 KYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp TSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred ceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence 999987 999999999999999997 777777776663 46699999999999999999986543
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=349.88 Aligned_cols=367 Identities=22% Similarity=0.276 Sum_probs=279.3
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCccc-ccCCCceEEEEEeCCeeeEEEEEEeeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|++|||++|+..|+|. .||.+.++..|+++| +||+|+|+++..+... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 5679999999988885 899999999999999 6999999998754321 1000 112
Q ss_pred CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-
Q 007247 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT- 239 (611)
Q Consensus 161 gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~- 239 (611)
|+.++.+....++. . ..+...+.++++.. +|| +||+|....
T Consensus 57 ~~~~~~~~~~~~~~--------------------~-----~~~~~~l~~~~~~~------------~~D-vv~~~~~~~~ 98 (394)
T 3okp_A 57 DYEVIRWPRSVMLP--------------------T-----PTTAHAMAEIIRER------------EID-NVWFGAAAPL 98 (394)
T ss_dssp SSEEEEESSSSCCS--------------------C-----HHHHHHHHHHHHHT------------TCS-EEEESSCTTG
T ss_pred ceEEEEcccccccc--------------------c-----hhhHHHHHHHHHhc------------CCC-EEEECCcchH
Confidence 44454443221111 0 01223333444433 699 889987554
Q ss_pred chHHHHHHHhccCCCCCCCc-eEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhcc
Q 007247 240 SLIPCYLKTMYKPKGMYKSA-KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318 (611)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~-k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 318 (611)
.++...++. .++ ++|+++|+...... .......+++..++.+|
T Consensus 99 ~~~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~d 142 (394)
T 3okp_A 99 ALMAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEVD 142 (394)
T ss_dssp GGGHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhCC
Confidence 344444443 255 58999996432000 00012345677788999
Q ss_pred EEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 319 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 319 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
.++++|+..++.+.+. ++. ..++.+|+||+|.+.|.|.. +..+..+++++|++.
T Consensus 143 ~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~~ 196 (394)
T 3okp_A 143 VLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFTD 196 (394)
T ss_dssp EEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCCT
T ss_pred EEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCCc
Confidence 9999999999998862 221 23899999999999887742 233677889999874
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
+.++|+|+||+.+.||++.+++|++++.+ ++++|+|+|+|+ ..+.++++.....+++.+.+..+.+.+..+++.
T Consensus 197 --~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 272 (394)
T 3okp_A 197 --TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAA 272 (394)
T ss_dssp --TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHH
T ss_pred --CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHh
Confidence 45899999999999999999999999976 699999999987 567777777555577999988888889899999
Q ss_pred ccEEEeCCCC-------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 477 ADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 477 aDv~l~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
||++++||.+ |+||++++|||++|+|||+++.||..|++.++ +|+++ +++|+++++++|.++
T Consensus 273 ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~l 341 (394)
T 3okp_A 273 ADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIEL 341 (394)
T ss_dssp CSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHHH
T ss_pred CCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHHH
Confidence 9999999999 99999999999999999999999999999999 99987 899999999999999
Q ss_pred HHhcCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHcC
Q 007247 550 LATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 550 l~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
+++ ++.+.++++++. .++|||+.++++|+++|+++....
T Consensus 342 ~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 342 LDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp HTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred HhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 997 777777776663 567999999999999999887544
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=369.18 Aligned_cols=427 Identities=15% Similarity=0.158 Sum_probs=279.6
Q ss_pred CceEEEEeeeec---------CccccccHHHHhcc--------chHHHHhCCCeEE----EEeecCCcccccCCCceEEE
Q 007247 84 GLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (611)
Q Consensus 84 ~MkIl~v~~~~~---------P~~~~GG~~~~~~~--------La~~L~~~Gh~V~----vit~~~~~~~~~~~~~~~~~ 142 (611)
.|+|++|+.+.. |. +||...++.+ |+++|+++||+|+ |+|...+.. ..++.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 589999999866 65 9999999984 6777788999886 998875432 1111111111
Q ss_pred EEeCCeeeEEEEEEeeecCceEEEEeCcc---chhhhcCCCCccccCCCCCCCCcchHHHHHHHH-HHHHHhhHHhccCC
Q 007247 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLNS 218 (611)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~i~~~~---~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~-~~~~~~~~~l~~~~ 218 (611)
... ..+|+.++.+.... ++.+ |.. ...++. .+..|. ..+..+.+...
T Consensus 355 ~i~------------~~~gv~I~RvP~~~~~g~l~~-~l~-k~~L~~------------~L~~F~~~~l~~il~~~~--- 405 (816)
T 3s28_A 355 RVY------------DSEYCDILRVPFRTEKGIVRK-WIS-RFEVWP------------YLETYTEDAAVELSKELN--- 405 (816)
T ss_dssp ECT------------TCSSEEEEEECEEETTEEECS-CCC-TTTCGG------------GHHHHHHHHHHHHHHHCS---
T ss_pred eec------------CcCCeEEEEecCCCccccccc-ccc-HHHHHH------------HHHHHHHHHHHHHHHhcC---
Confidence 100 01356666553211 0010 000 011111 112233 33334444332
Q ss_pred CCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCC
Q 007247 219 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 298 (611)
Q Consensus 219 ~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (611)
.+|| |||+|.|.+++++..++... ++|+|+|.|+........ . +...... ...+
T Consensus 406 -------~~PD-VIHsH~~~sglva~llar~~-------gvP~V~T~Hsl~~~k~~~-~-----~~~~~~~-----~~~y 459 (816)
T 3s28_A 406 -------GKPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYPD-S-----DIYWKKL-----DDKY 459 (816)
T ss_dssp -------SCCS-EEEEEHHHHHHHHHHHHHHH-------TCCEEEECSCCHHHHSTT-T-----TTTHHHH-----HHHH
T ss_pred -------CCCe-EEEeCCchHHHHHHHHHHHc-------CCCEEEEEeccccccccc-c-----cchhhhH-----HHHH
Confidence 2599 99999998888888887764 899999999764422110 0 0000000 0000
Q ss_pred CCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc-CCCcc----cc---------hhhhccceeEeeCCcccCCcCC
Q 007247 299 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LD---------NIIRKTGIKGIVNGMDVQEWNP 364 (611)
Q Consensus 299 ~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-~~g~~----~~---------~~~~~~~i~vI~Ngvd~~~~~p 364 (611)
. ....+...+..+..||.|+++|+..++.+.... .++.. +. ... ..++.+||||+|.+.|.|
T Consensus 460 ~---~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F~P 535 (816)
T 3s28_A 460 H---FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIYFP 535 (816)
T ss_dssp C---HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTSCC
T ss_pred H---HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHcCc
Confidence 0 000112244578899999999999998643210 11110 00 001 128999999999999988
Q ss_pred CCccc--cccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCC
Q 007247 365 LTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTG 440 (611)
Q Consensus 365 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g 440 (611)
...+. +...++.. ..........++.+|+..+++.++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|+|
T Consensus 536 ~~~~~~Rl~~~~~~i---~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g 612 (816)
T 3s28_A 536 YTEEKRRLTKFHSEI---EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGD 612 (816)
T ss_dssp TTCTTTCCGGGHHHH---HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCC
T ss_pred cchhhhhhhhccccc---cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCC
Confidence 65321 00000000 0000001122344566445677999999999999999999999999976 68999999998
Q ss_pred Cc---------hhHHHHHHHHHHCC--CceEEecccC----hHHHHHHHH-HccEEEeCCCCCCCcHHHHHHHHcCCceE
Q 007247 441 KK---------PMEKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPI 504 (611)
Q Consensus 441 ~~---------~~~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~i~~-~aDv~l~pS~~E~~gl~~lEAma~G~PvI 504 (611)
++ .+.+.++++..+++ +++.+.+... .+.+..+++ .||++++||.+|+||++++|||+||+|||
T Consensus 613 ~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVI 692 (816)
T 3s28_A 613 RRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 692 (816)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEE
T ss_pred CcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEE
Confidence 72 25566777777665 5677776433 355556777 68999999999999999999999999999
Q ss_pred EcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHH----HhcCHHHHHHHHHHHH---HhhCCchHHHH
Q 007247 505 VASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNGM---AQDLSWKGPAK 577 (611)
Q Consensus 505 ~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll----~~~~~~~~~~~~~~~~---~~~fsw~~~a~ 577 (611)
+|+.||+.|++.++.+|+++ +++|+++++++|.+++ .+ ++.+.++++++. .++|||+.+++
T Consensus 693 asd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~a~ 760 (816)
T 3s28_A 693 ATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIYSQ 760 (816)
T ss_dssp EESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred EeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999987 9999999999998777 65 667777777764 48899999999
Q ss_pred HHHHHHHHHH
Q 007247 578 KWEETLLNLE 587 (611)
Q Consensus 578 ~~~~~~~~l~ 587 (611)
+|+++|+.+.
T Consensus 761 ~ll~lY~~~g 770 (816)
T 3s28_A 761 RLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999765
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=335.05 Aligned_cols=370 Identities=18% Similarity=0.180 Sum_probs=262.1
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
.|+.-+....| |. .||.+.++..|+++|+++||+|+++++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 46666666665 53 7999999999999999999999999976321110 0112333
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch-H
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL-I 242 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~-~ 242 (611)
+..+..+.+.. +. +.. .. ..+...+.++++.. +|| |||+|.+.... .
T Consensus 67 ~~~~~~~~~~~----------~~------~~~--~~-~~~~~~l~~~l~~~------------~~D-vv~~~~~~~~~~~ 114 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YPP--YD-LALASKMAEVAQRE------------NLD-ILHVHYAIPHAIC 114 (394)
T ss_dssp EECCCCC--------------CC------SCC--HH-HHHHHHHHHHHHHH------------TCS-EEEECSSTTHHHH
T ss_pred EEecccccccc----------cc------ccc--cc-HHHHHHHHHHHHHc------------CCC-EEEEcchhHHHHH
Confidence 22222111000 00 000 01 11223334444443 699 99999755433 3
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
....+.... .++|+|+++|+.... . .+. ......+++..++.+|.+++
T Consensus 115 ~~~~~~~~~-----~~~p~v~~~h~~~~~-~--------~~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 115 AYLAKQMIG-----ERIKIVTTLHGTDIT-V--------LGS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHTT-----TCSEEEEECCHHHHH-T--------TTT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHhhc-----CCCCEEEEEecCccc-c--------cCC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 333333321 268999999964320 0 000 00123456777889999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+..++.+.+. ++. ..++.+||||+|...|.+.. ...++++++++. +.
T Consensus 163 ~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-------NKDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SE 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-------SSCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-------cccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CC
Confidence 999999998852 222 13899999999998887653 245677888753 45
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
++|+|+||+.++||++.+++|++++.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+. .+.+..+++.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999987 4566777776654 45666653 3445679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ +++|+++++++|.+++++ ++.+.
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999987 899999999999999997 77777
Q ss_pred HHHHHHH---HhhCCchHHHHHHHHHHHHHHHcC
Q 007247 560 EMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 560 ~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
++++++. .++|||+.++++|+++|++++...
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 7776664 489999999999999999987643
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=332.88 Aligned_cols=368 Identities=18% Similarity=0.196 Sum_probs=263.4
Q ss_pred cccCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEee
Q 007247 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158 (611)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (611)
....++|||+|++..++| ..||.+.++..|+++|+++||+|+++++...... +.....
T Consensus 15 ~~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~------------------ 72 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYVV------------------ 72 (406)
T ss_dssp ------CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTEE------------------
T ss_pred ccCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCcccc------------------
Confidence 334457999999976555 3699999999999999999999999998743220 000000
Q ss_pred ecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCc
Q 007247 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238 (611)
Q Consensus 159 ~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~ 238 (611)
..| .++.+....... .+. +. ..+...+.++++.. +|| +||+|.+.
T Consensus 73 ~~~-~~~~~~~~~~~~--------~~~-------~~------~~~~~~l~~~l~~~------------~~D-ii~~~~~~ 117 (406)
T 2gek_A 73 SGG-KAVPIPYNGSVA--------RLR-------FG------PATHRKVKKWIAEG------------DFD-VLHIHEPN 117 (406)
T ss_dssp ECC-CCC---------------------------CC------HHHHHHHHHHHHHH------------CCS-EEEEECCC
T ss_pred cCC-cEEeccccCCcc--------ccc-------cc------HHHHHHHHHHHHhc------------CCC-EEEECCcc
Confidence 001 111110000000 000 00 01123333444433 599 89998877
Q ss_pred cchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhcc
Q 007247 239 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318 (611)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 318 (611)
.......+... .++|+|+++|+...... .. .....+++..+..+|
T Consensus 118 ~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~--------------~~~~~~~~~~~~~~d 162 (406)
T 2gek_A 118 APSLSMLALQA-------AEGPIVATFHTSTTKSL--------------TL--------------SVFQGILRPYHEKII 162 (406)
T ss_dssp SSSHHHHHHHH-------EESSEEEEECCCCCSHH--------------HH--------------HHHHSTTHHHHTTCS
T ss_pred chHHHHHHHHh-------cCCCEEEEEcCcchhhh--------------hH--------------HHHHHHHHHHHhhCC
Confidence 65555454443 37899999997432110 00 011123346678999
Q ss_pred EEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 319 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 319 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
.++++|+..++.+.+. ++. .++ +|+||+|...+.+.... .+++
T Consensus 163 ~ii~~s~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~- 205 (406)
T 2gek_A 163 GRIAVSDLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYP- 205 (406)
T ss_dssp EEEESSHHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCS-
T ss_pred EEEECCHHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhcc-
Confidence 9999999999988752 222 278 99999998776554311 0111
Q ss_pred CCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHH
Q 007247 399 DRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 475 (611)
Q Consensus 399 ~~~~~~il~iGrl-~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 475 (611)
++.++|+|+||+ .+.||++.+++|++++.+ ++++|+|+|+|+. +.++++..++.+++.+.+..+.+.+..+|+
T Consensus 206 -~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 206 -REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMR 281 (406)
T ss_dssp -CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHH
T ss_pred -CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHH
Confidence 145799999999 999999999999999976 6899999999873 666666665556788888888888889999
Q ss_pred HccEEEeCCC-CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 476 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 476 ~aDv~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
.||++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ +++|+++++++|.+++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~-- 349 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED-- 349 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--
Confidence 9999999996 899999999999999999999999999999999999987 899999999999999997
Q ss_pred HHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHcCC
Q 007247 555 TQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGS 591 (611)
Q Consensus 555 ~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~~~ 591 (611)
++.+.++++++. .+.|||+.++++|+++|++++....
T Consensus 350 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 350 DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 777777776664 3499999999999999999986543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=332.85 Aligned_cols=363 Identities=14% Similarity=0.110 Sum_probs=255.9
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
|++|||++++.. + ..||.+.++..|+++|+++||+|++++...+..... .. ..+. ....|
T Consensus 38 ~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~--~~-----------~~~~---~~~~~ 97 (416)
T 2x6q_A 38 LKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFN--VT-----------KTFH---NALQG 97 (416)
T ss_dssp TTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHH--HH-----------HHHH---HHHTT
T ss_pred hhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhh--hh-----------cccc---eeecc
Confidence 567999999976 3 369999999999999999999999998652210000 00 0000 00000
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcch-HHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~-~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
.. .+. +... ...+..+.+.+.+.++. .+|| |||+|++...
T Consensus 98 ~~--------------------~~~------~~~~~~~~~~~~~~~~~~~l~~------------~~~D-vv~~~~~~~~ 138 (416)
T 2x6q_A 98 NE--------------------SLK------LTEEMKELYLNVNRENSKFIDL------------SSFD-YVLVHDPQPA 138 (416)
T ss_dssp CC--------------------SCC------CCHHHHHHHHHHHHHHHHSSCG------------GGSS-EEEEESSTTG
T ss_pred cc--------------------ccc------ccHHHHHHHHHHHHHHHHHHhh------------cCCC-EEEEeccchh
Confidence 00 000 1111 11111222223333322 2599 9999987664
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
.+..+++ ..+|+|+++|+..... ....+.+++..+..+|.+
T Consensus 139 ~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~~ 179 (416)
T 2x6q_A 139 ALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDRY 179 (416)
T ss_dssp GGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCEE
Confidence 4332221 2489999999643210 001234556667788877
Q ss_pred E-ecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 321 L-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 321 i-~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
+ ++|+...+.+ . ..++.+||||+|...+.+... .......++++++++.
T Consensus 180 i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~~- 229 (416)
T 2x6q_A 180 IFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVDP- 229 (416)
T ss_dssp EESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCCT-
T ss_pred EEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCCC-
Confidence 6 6665443211 1 238899999999876654321 1223567888899874
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc---hhHHHHHHHHHHCC--CceEEeccc---ChHH
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKF---NIPL 469 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~---~~~~ 469 (611)
+.++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+. ++.+.++++...++ +++.+.+.+ +.+.
T Consensus 230 -~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~ 308 (416)
T 2x6q_A 230 -EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHARE 308 (416)
T ss_dssp -TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHH
T ss_pred -CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHH
Confidence 45899999999999999999999999976 6899999999962 34556666665543 568877744 3567
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
+..+++.||++++||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.++
T Consensus 309 ~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~l 376 (416)
T 2x6q_A 309 VNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLYL 376 (416)
T ss_dssp HHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999999999999987 5 999999999999
Q ss_pred HHhcCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHH
Q 007247 550 LATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 550 l~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+++ ++.+.++++++. .++|||+.++++|+++|++++
T Consensus 377 l~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 377 LKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 997 777777777663 468999999999999998765
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=333.91 Aligned_cols=363 Identities=16% Similarity=0.165 Sum_probs=257.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++..++| .||.+.++..|+++|+++||+|+++++...... ..|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--------------------------~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC--------------------------PKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------CTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------CCCcEE
Confidence 899999998777 599999999999999999999999997632110 125555
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.+..+.+. +..++..+...+...++.. +|| +||+|++...+...
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~------------~~D-vv~~~~~~~~~~~~ 96 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH------------PAD-RVVGFNKMPGLDVY 96 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS------------CCS-EEEESSCCTTCSEE
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc------------CCC-EEEEecCCCCceee
Confidence 544322111 1122223333444444432 699 89998754432111
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhh--hccEEEe
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVLT 322 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~vi~ 322 (611)
+... ....+.+++.|+.... ....+ .....+.+..+. .+|.+++
T Consensus 97 ~~~~-------~~~~~~~~~~~~~~~~------------~~~~~---------------~~~~~~~~~~~~~~~~d~ii~ 142 (374)
T 2iw1_A 97 FAAD-------VCYAEKVAQEKGFLYR------------LTSRY---------------RHYAAFERATFEQGKSTKLMM 142 (374)
T ss_dssp ECCS-------CCHHHHHHHHCCHHHH------------TSHHH---------------HHHHHHHHHHHSTTCCCEEEE
T ss_pred eccc-------cccceeeeecccchhh------------hcHHH---------------HHHHHHHHHHhhccCCcEEEE
Confidence 1000 0122333333321110 00000 001122233333 6999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+..++.+.+ .+|.+.+ ++.+||||+|.+.|.+... ...+..+++++|++. +.
T Consensus 143 ~s~~~~~~~~~--~~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~ 196 (374)
T 2iw1_A 143 LTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKE--QQ 196 (374)
T ss_dssp SCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCT--TC
T ss_pred cCHHHHHHHHH--HhCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCC--CC
Confidence 99999999875 2455433 8999999999988765432 123567888999874 45
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc---CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHc
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a 477 (611)
++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. . +.+..+++.|
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~a 271 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG-R-NDVSELMAAA 271 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC-C-SCHHHHHHHC
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC-c-ccHHHHHHhc
Confidence 899999999999999999999999975 4899999999873 44555554433 56877764 3 3466799999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCC-ccCHHHHHHHHHHHHHhcCHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~-~~d~~~la~~i~~ll~~~~~~ 556 (611)
|++++||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + ++|+++++++|.+++++ ++
T Consensus 272 d~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~~ 339 (374)
T 2iw1_A 272 DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--SP 339 (374)
T ss_dssp SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--HH
T ss_pred CEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--hH
Confidence 99999999999999999999999999999999999999999999987 6 88999999999999997 77
Q ss_pred HHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 557 ALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 557 ~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.+.++++++. .++++|+..++++.+++++.+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 340 LRMAWAENARHYADTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 7788887774 4688999999999999987653
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=324.85 Aligned_cols=316 Identities=16% Similarity=0.121 Sum_probs=245.3
Q ss_pred CCCceEEEEeee--------e---cCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeee
Q 007247 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (611)
Q Consensus 82 ~~~MkIl~v~~~--------~---~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (611)
|++|||++++.. + +|. ..||.+.++..|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~-~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQ-GYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCS-SSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCcc-cCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 557999999998 3 442 46999999999999999999999999977432111
Q ss_pred EEEEEEeeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCe
Q 007247 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 230 (611)
Q Consensus 151 ~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dv 230 (611)
+++.++ ..+ .. ..+.++++.. +||
T Consensus 63 ---------~~~~~~--~~~-------------------------~~-------~~l~~~l~~~------------~~D- 86 (342)
T 2iuy_A 63 ---------PGLTVV--PAG-------------------------EP-------EEIERWLRTA------------DVD- 86 (342)
T ss_dssp ---------TTEEEC--SCC-------------------------SH-------HHHHHHHHHC------------CCS-
T ss_pred ---------Ccceec--cCC-------------------------cH-------HHHHHHHHhc------------CCC-
Confidence 122211 000 00 0122233332 699
Q ss_pred EEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHh
Q 007247 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 310 (611)
Q Consensus 231 ivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (611)
|||+|.+...... .. ..++| |+++|+.....
T Consensus 87 vi~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~-------------------------------------- 117 (342)
T 2iuy_A 87 VVHDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP-------------------------------------- 117 (342)
T ss_dssp EEEECSSSSSCST---TC-------CTTCE-EEEEECSSSBC--------------------------------------
T ss_pred EEEECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc--------------------------------------
Confidence 9999986654332 11 15889 99999643200
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
..+|.++++|+..++.+.+ ..++.+||||+|.+.|.+...
T Consensus 118 ----~~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~----------------------- 157 (342)
T 2iuy_A 118 ----VNPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD----------------------- 157 (342)
T ss_dssp ----SCCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT-----------------------
T ss_pred ----ccceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc-----------------------
Confidence 0199999999999998763 128899999999988876531
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
.. ++.++|+|+||+.+.||++.+++|++++ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+.+
T Consensus 158 ----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l 225 (342)
T 2iuy_A 158 ----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERR 225 (342)
T ss_dssp ----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHH
T ss_pred ----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHH
Confidence 01 2446899999999999999999999998 89999999997 566677777666678999888888888
Q ss_pred HHHHHHccEEEeCCC----------CCCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEecccccccccCCccC
Q 007247 471 HMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d 538 (611)
..+++.||++++||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++ |
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d 294 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-A 294 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-C
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-C
Confidence 899999999999999 79999999999999999999999999999999 8999976 88 9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
+++++++|.++++ .+.+++.+.++|||+.++++|+++|++++...
T Consensus 295 ~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 295 PDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 9999999999886 33344445689999999999999999998643
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=328.06 Aligned_cols=357 Identities=14% Similarity=0.139 Sum_probs=256.9
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||+||++.+ |. .||.+.++..|+++|+++ |+|++++...... ..+. ....
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~-~~~~------------------------~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGR-SVHA------------------------NIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSC-CSCS------------------------SSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCc-cccc------------------------cccc
Confidence 8999999864 53 699999999999999999 9999999763210 0000 0000
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+ +.. ....+ ..+.+.. + ....+...++.. +|| |||+|.|...+.+.
T Consensus 52 ~--~~~-~~~~~------~~~~~~~---~---------~~~~l~~~l~~~------------~~D-iv~~~~~~~~~~~~ 97 (413)
T 3oy2_A 52 F--DAQ-TAEHV------RGLNEQG---F---------YYSGLSEFIDVH------------KPD-IVMIYNDPIVIGNY 97 (413)
T ss_dssp E--EHH-HHHHH------TTCCSTT---C---------CHHHHHHHHHHH------------CCS-EEEEEECHHHHHHH
T ss_pred C--Ccc-ccccc------ccccccc---c---------hHHHHHHHHHhc------------CCC-EEEEcchHHHHHHH
Confidence 0 000 00000 0111000 0 011122222222 699 99999655544333
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhcc--EEEe
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVLT 322 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~vi~ 322 (611)
..+. .+. -...+++...|+..... ...++..+..+| .+++
T Consensus 98 ~~~~-~~~---~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~ii~ 139 (413)
T 3oy2_A 98 LLAM-GKC---SHRTKIVLYVDLVSKNI----------------------------------RENLWWIFSHPKVVGVMA 139 (413)
T ss_dssp HHHG-GGC---CSCCEEEEEECCCSBSC----------------------------------CGGGGGGGGCTTEEEEEE
T ss_pred HHHh-ccC---CCCCceeeeccccchhh----------------------------------HHHHHHHHhccCCceEEE
Confidence 3332 210 01345666666432200 011355677878 9999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+..++.+.+ +|.+ .++.+||||+|...|. ..+++++++.+.+.
T Consensus 140 ~S~~~~~~~~~---~~~~-------~~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~~ 184 (413)
T 3oy2_A 140 MSKCWISDICN---YGCK-------VPINIVSHFVDTKTIY-------------------------DARKLVGLSEYNDD 184 (413)
T ss_dssp SSTHHHHHHHH---TTCC-------SCEEECCCCCCCCCCT-------------------------THHHHTTCGGGTTS
T ss_pred cCHHHHHHHHH---cCCC-------CceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccCc
Confidence 99999999986 4542 2899999999988761 23567777653467
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCch----hHHHHHHHHHHCC--Cc-------eEEecccCh
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFNI 467 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-------v~~~~~~~~ 467 (611)
++|+|+||+.++||++.+++|++++.+ ++++|+|+|+|+.. +++.++++..+++ ++ +.+.+..+.
T Consensus 185 ~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~ 264 (413)
T 3oy2_A 185 VLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTD 264 (413)
T ss_dssp EEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCH
T ss_pred eEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCH
Confidence 899999999999999999999999865 78999999998743 4477777766654 33 555566788
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcc---------------eE--Eecccccc
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSVD 530 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~---------------G~--l~~~~~~~ 530 (611)
+.+..+|+.||++++||.+|+||++++|||+||+|||+|+.||+.|++.++.+ |+ ++
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~------ 338 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE------ 338 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE------
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee------
Confidence 88889999999999999999999999999999999999999999999999887 88 87
Q ss_pred cccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHcC
Q 007247 531 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 531 ~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
+++|+++++++| +++++ ++.+.++++++. .++|||+.++++|+++|++++...
T Consensus 339 ----~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 339 ----GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp ----EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ----CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 889999999999 99997 777777777765 378999999999999999998654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=330.62 Aligned_cols=442 Identities=17% Similarity=0.177 Sum_probs=290.3
Q ss_pred EEeeeecCccccccHHHHhccchHHHHh-CCCeEEEEeecCCcccc----cCCC-ceE--------EEE---EeCCeeeE
Q 007247 89 FVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYKD----AWDT-DVV--------IEL---KVGDKIEK 151 (611)
Q Consensus 89 ~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~~----~~~~-~~~--------~~~---~~~~~~~~ 151 (611)
-+++|+.. +.||+=+|+..-|+.+.+ .|-+...|.|...+... ..+. ... +.- ....+.-.
T Consensus 32 E~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 109 (725)
T 3nb0_A 32 ETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRGVH 109 (725)
T ss_dssp EEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTCC
T ss_pred eeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCCCe
Confidence 35566544 799999999998888775 58899999985322111 0000 000 000 00111234
Q ss_pred EEEEEeeecCceEEEE-eCccchh-------hhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCC
Q 007247 152 VRFFHCHKRGVDRVFV-DHPWFLA-------KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS 223 (611)
Q Consensus 152 ~~~~~~~~~gv~~~~i-~~~~~~~-------~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~ 223 (611)
+++-+..+.|-+++.+ |...++. .+|-..+ +=++..+. +.+...+|.+++.++++.+..+..
T Consensus 110 v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~--i~s~~~yg-~~dd~~~F~y~~~avl~~l~~~~~------- 179 (725)
T 3nb0_A 110 FVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVG--IPSPENDF-ETNDAILLGYTVAWFLGEVAHLDS------- 179 (725)
T ss_dssp EEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHC--CCCCSSCH-HHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred EEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhC--cCCCCccc-chhHHHHHHHHHHHHHHHHHhcCC-------
Confidence 6666677888887654 5544443 3553322 22222222 334677999999999998876641
Q ss_pred CCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCcc------ccccCcc-cccccCCCccccccccccc
Q 007247 224 GPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAFE-DFGLLNLPAQFKSSFDFID 296 (611)
Q Consensus 224 ~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~ 296 (611)
+.|| |+|+|||++++++.+++..+ .++|+|||+|+... ||.++.. .+..++++.....
T Consensus 180 --~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------ 244 (725)
T 3nb0_A 180 --QHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------ 244 (725)
T ss_dssp --SEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH------
T ss_pred --CCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh------
Confidence 2589 99999999999999999764 69999999999852 3433211 1222222221100
Q ss_pred CCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCc
Q 007247 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (611)
Q Consensus 297 ~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 376 (611)
.-.....++++.++..||.|+|||+.+++++... ++.+.+ .+ |+||+|+..|+|...
T Consensus 245 ----~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~L--l~r~~d------~i--IpNGID~~~f~p~~~--------- 301 (725)
T 3nb0_A 245 ----FGIYHRYCIERAAAHSADVFTTVSQITAFEAEHL--LKRKPD------GI--LPNGLNVIKFQAFHE--------- 301 (725)
T ss_dssp ----TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--TSSCCS------EE--CCCCBCCCCCSSTTH---------
T ss_pred ----hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHH--hcCCCC------EE--EcCCccccccCcchh---------
Confidence 0011356889999999999999999999999852 333322 33 999999999988521
Q ss_pred chhhhccHHHHHHHHHHh------CCCCC-CCCcEEEEEcCcc-cccCHHHHHHHHHhccc---------CCcEEEEEeC
Q 007247 377 STVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVLGT 439 (611)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~------gl~~~-~~~~~il~iGrl~-~~Kg~d~li~a~~~l~~---------~~~~lvivG~ 439 (611)
....+...+..+++.+ |++.+ ++.++|+.+||++ ++||+|.+++|+.+|.. .-+.|+|+..
T Consensus 302 --~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~ 379 (725)
T 3nb0_A 302 --FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPA 379 (725)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCC
T ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCC
Confidence 1123334555665544 44444 3445566689999 79999999999999863 1377888877
Q ss_pred CCchh--------------HHHH---------------------------------------------------------
Q 007247 440 GKKPM--------------EKQL--------------------------------------------------------- 448 (611)
Q Consensus 440 g~~~~--------------~~~l--------------------------------------------------------- 448 (611)
+...+ .+.+
T Consensus 380 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~l 459 (725)
T 3nb0_A 380 KNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQL 459 (725)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCC
T ss_pred CCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCC
Confidence 63211 0000
Q ss_pred --------------------HHHHHHC----CCceEEecccChH-------HHHHHHHHccEEEeCCCCCCCcHHHHHHH
Q 007247 449 --------------------EQLEILY----PEKARGVAKFNIP-------LAHMIIAGADFILIPSRFEPCGLIQLHAM 497 (611)
Q Consensus 449 --------------------~~l~~~~----~~~v~~~~~~~~~-------~~~~i~~~aDv~l~pS~~E~~gl~~lEAm 497 (611)
+++.... ..++.++..|... .+..++++||++|+||.+|+||++++|||
T Consensus 460 pp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAm 539 (725)
T 3nb0_A 460 PPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECT 539 (725)
T ss_dssp CCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHH
T ss_pred CCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHH
Confidence 0000000 0124555444222 35679999999999999999999999999
Q ss_pred HcCCceEEcCCcccccceecC-------cceEEecccccccccCCccCHHHHHHHHHHHHHhc---CHHHHHHHHHHH--
Q 007247 498 RYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG-- 565 (611)
Q Consensus 498 a~G~PvI~s~~gg~~e~v~~g-------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~-- 565 (611)
+||+|||+|+.||+.|+|.++ .+|+++... ++.|+++++++|.+++..+ ++..+.++++++
T Consensus 540 A~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r-------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~ 612 (725)
T 3nb0_A 540 VMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR-------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEA 612 (725)
T ss_dssp HTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC-------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999875 479876111 3457777777777776532 355666777666
Q ss_pred HHhhCCchHHHHHHHHHHHHHHHc
Q 007247 566 MAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 566 ~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
++++|||+.++++|+++|+.++..
T Consensus 613 ~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 613 LSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp GGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhh
Confidence 458999999999999999998864
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=298.56 Aligned_cols=355 Identities=12% Similarity=0.099 Sum_probs=228.4
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeec
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
...+|||++++..|.|....||.. .+.+|+++|+++||+|+|+++......... ....
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~---------------------~~~~ 100 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL---------------------QSFK 100 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH---------------------GGGT
T ss_pred CCCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH---------------------Hhhh
Confidence 356899999999988842347775 588999999999999999998632100000 0000
Q ss_pred CceEEEEeCcc-chhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc
Q 007247 161 GVDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (611)
Q Consensus 161 gv~~~~i~~~~-~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~ 239 (611)
+.....+.... +..+ +.. +.. . ....+.. .++| +||+|.|.+
T Consensus 101 ~~~~~~~~~~~~~~~~--------i~~------~~~----------~---~~~~~~~---------~~~D-vv~a~~~~~ 143 (413)
T 2x0d_A 101 SFKYVMPEEDKDFALQ--------IVP------FND----------R---YNRTIPV---------AKHD-IFIATAWWT 143 (413)
T ss_dssp TSEECCTTCCCCCSEE--------EEE------CSC----------C---TTCCEEE---------CTTE-EEEECSHHH
T ss_pred ccceeeccCCccccce--------eee------ccc----------c---ccccccC---------CCCC-EEEEehHHH
Confidence 00000000000 0000 000 000 0 0000000 1589 889998877
Q ss_pred chHHHHHH----HhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhh
Q 007247 240 SLIPCYLK----TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315 (611)
Q Consensus 240 ~~~~~~l~----~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 315 (611)
+.....+. ..+. ....|.++.+|+.... +. + ......+.+..+.
T Consensus 144 ~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~--~~-------------------------~-~~~~~~~~~~~~~ 191 (413)
T 2x0d_A 144 AYAAQRIVSWQSDTYG----IPPNKILYIIQDFEPG--FY-------------------------Q-WSSQYVLAESTYK 191 (413)
T ss_dssp HHHHHHHHHHHHHHHT----CCCCCEEEEECSCGGG--GS-------------------------C-SSHHHHHHHHTTS
T ss_pred HHHHHHhhhhhhhhcc----cccCcEEEEEeechhh--cC-------------------------c-cChHHHHHHHHhc
Confidence 65554431 1110 0256778878854220 00 0 0001122334455
Q ss_pred hcc--EEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 316 ESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 316 ~ad--~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
.++ .++++|+..++.+.+ +|.+.. ++.+|+||+|.+.|.+..
T Consensus 192 ~~~~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~--------------------------- 235 (413)
T 2x0d_A 192 YRGPQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN--------------------------- 235 (413)
T ss_dssp CCSCEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT---------------------------
T ss_pred cCCceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc---------------------------
Confidence 554 689999999999986 343322 678999999876543321
Q ss_pred hCCCCCCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--C---CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 394 VGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl-~~~Kg~d~li~a~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
.+ .++.+.++++||+ .+.||++.+++|++++.+ + +++|+|+|+|... .++ ...+++.+.+..+.
T Consensus 236 ~~---~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~~ 305 (413)
T 2x0d_A 236 DK---RQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLTL 305 (413)
T ss_dssp SC---CCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCCH
T ss_pred cc---cCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCCH
Confidence 00 1234688999996 689999999999999865 4 3899999998742 011 12346888888888
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHH
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
+.+..+|+.||++++||.+|+||++++||||||+|||++ .+|..|++.++.+|+++ +++|+++++++|.
T Consensus 306 ~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai~ 374 (413)
T 2x0d_A 306 EDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETLV 374 (413)
T ss_dssp HHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHHH
Confidence 889999999999999999999999999999999999995 56778999999999987 9999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 548 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 548 ~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++++++ +.+.+ ......+.|||+...++ .+.|+++.
T Consensus 375 ~ll~~~--~~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 375 ELCMSF--NNRDV-DKKESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp HHHHHT--C--------CCBSCGGGCCCC----TTHHHHH
T ss_pred HHHcCH--HHHHH-hHHHHHHhCCHHHHHHH-HHHHHHHH
Confidence 999984 33333 11123468999999887 66666664
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-29 Score=262.49 Aligned_cols=338 Identities=15% Similarity=0.015 Sum_probs=225.7
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
+|||++++. + .||....+..|+++|+++||+|.++++......+.. ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 389999973 2 478888899999999999999999997632111100 012444
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~ 243 (611)
++.+..+.+... .... ......++......+.++++.. +|| +||+|.....+..
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~------------~pD-vv~~~~~~~~~~~ 111 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY------------KPD-VVLGMGGYVSGPG 111 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH------------CCS-EEEECSSTTHHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc------------CCC-EEEEeCCcCchHH
Confidence 444332211100 0000 0001111111223333344433 699 8899865433333
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..+... .++|+|++.|+... + ...+...+.+|.+++.
T Consensus 112 ~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 112 GLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEES
T ss_pred HHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEec
Confidence 333333 48999999995321 0 0112345679999998
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
++.. + + ++.+|+||+|...+.+.. .+++++++. +.+
T Consensus 149 ~~~~---------~--~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (364)
T 1f0k_A 149 FPGA---------F--P--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPV 184 (364)
T ss_dssp STTS---------S--S--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSE
T ss_pred Chhh---------c--C--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCc
Confidence 7643 1 1 577899999977665421 134556543 334
Q ss_pred -EEEEEcCcccccCHHHHHHHHHhcccCCcE-EEEEeCCCchhHHHHHHHHHHCC-CceEEecccChHHHHHHHHHccEE
Q 007247 404 -VIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 404 -~il~iGrl~~~Kg~d~li~a~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
++++.|++.++||.+.+++|++++.+ +++ ++++|+|+ . +.++++..+++ +++.+.+.. +.+..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 45566799999999999999999966 788 57788887 2 55666666554 467777655 3456799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccc--------cceecCcceEEecccccccccCCccC--HHHHHHHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 550 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll 550 (611)
++||. |++++|||+||+|||+++.+|.. ++++++ .|+++ +++| +++++++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99994 99999999999999999999874 355444 59986 8888 99999999998
Q ss_pred HhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHH
Q 007247 551 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+ ++.+.++++++. .+.|+|+.++++|+++|++..
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 5 777778877764 368999999999999998654
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=275.81 Aligned_cols=202 Identities=15% Similarity=0.117 Sum_probs=163.1
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..++.+|.++++|+..++.+.+ ++ ++.+||||+|.+.|.+....
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~~------------------- 217 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDPS------------------- 217 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCSC-------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCccccc-------------------
Confidence 45677889999999999999887664 22 68999999998776432110
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ .+++ ...+++.+.+..+.
T Consensus 218 ---------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 218 ---------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMKH 275 (406)
T ss_dssp ---------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCCH
T ss_pred ---------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCCH
Confidence 1 1233789999999999998 4444332 3789999999986 1111 23467999988888
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHH-------HcCCceEEcCCcccccceecCcceEE-ecccccccccCCccCH
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDV 539 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~l-~~~~~~~~~~v~~~d~ 539 (611)
+.+..+|+.||++++||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCCH
Confidence 888899999999999999999999999999 99999999987 667889998 7 99999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHH--HHHHHH
Q 007247 540 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEV 588 (611)
Q Consensus 540 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~--~~~l~~ 588 (611)
++++++|.++++++. . ...++|||+.++++++++ |+++..
T Consensus 340 ~~la~ai~~ll~~~~--------~-~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALEAPR--------V-RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHHCCC--------C-CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHhCcc--------h-hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999999844 1 235789999999999999 887664
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-28 Score=270.35 Aligned_cols=371 Identities=15% Similarity=0.174 Sum_probs=267.8
Q ss_pred hHHHH---HHHHHHHHHh-hHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-HHHHhccCCCC-----C--CCceEEE
Q 007247 196 NQLRF---SLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVF 263 (611)
Q Consensus 196 ~~~r~---~~~~~~~~~~-~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-----~--~~~k~v~ 263 (611)
..+|+ .+|+.+.++. ++.+..... -+..--+|| +||+||||+++++. +++.....+|+ + .+.+++|
T Consensus 265 k~lRL~Qe~ff~~a~lq~ilr~~~~~~~-~~~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vy 342 (796)
T 1l5w_A 265 KKLRLMQQYFQCACSVADILRRHHLAGR-KLHELADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAY 342 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChhhcCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEE
Confidence 34555 5778888875 554321000 000000478 99999999999888 66544321111 1 3778999
Q ss_pred EEecCccccc--cCcccccccCCCcccc----------cc-----------cccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 264 CIHNIAYQGR--FAFEDFGLLNLPAQFK----------SS-----------FDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 264 ~iH~~~~~~~--~~~~~~~~~~~~~~~~----------~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
|+|++.++|. |+.+.+..+- |+.+. .. +. ..+. .....+++++.++..|+.|
T Consensus 343 T~HTl~~egle~wp~~l~~~~l-pr~~~ii~~I~~~f~~~~~~~~~~~~~~~~-~~~i---~~~~~vnMa~lai~~S~~V 417 (796)
T 1l5w_A 343 TNHTLMPEALERWDVKLVKGLL-PRHMQIINEINTRFKTLVEKTWPGDEKVWA-KLAV---VHDKQVHMANLCVVGGFAV 417 (796)
T ss_dssp ECCCCSGGGSCEEEHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHSTTCHHHHH-HHCS---EETTEEEHHHHHHHHSSEE
T ss_pred EecCCcHhhhhcCCHHHHHHHh-HHHHHHHhccCHHHHHHHHHhcCCcHHHHh-hhhc---ccCCcccHHHHHHHhcCcc
Confidence 9999999985 6655443211 11110 00 00 0000 0113578899999999999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCc----CCCCccccccccC----------------cch--
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST-- 378 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~----------------~~~-- 378 (611)
.+||+-+.+.+... .++ +... +.+.++..|.||||...| +|..++.+...|+ ..+
T Consensus 418 NgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~ 494 (796)
T 1l5w_A 418 NGVAALHSDLVVKD-LFP-EYHQ-LWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAK 494 (796)
T ss_dssp EESSHHHHHHHHHT-TSH-HHHH-HCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHH
T ss_pred ccccHHHHHHHHhH-Hhh-HHHH-hCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHH
Confidence 99999999999752 222 1111 234589999999999999 7877777777776 443
Q ss_pred ----hhhccHHHHHH----HHHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCC
Q 007247 379 ----VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTG 440 (611)
Q Consensus 379 ----~~~~~~~~~~~----~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-li~a~~~l~~---------~~~~lvivG~g 440 (611)
+.+.|..+|.+ +++++|++.+++.++++++.|+.++||+++ ++..+.++.+ .++++++.|++
T Consensus 495 ~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA 574 (796)
T 1l5w_A 495 FRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKA 574 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecC
Confidence 34566667777 589999999999999999999999999999 8888887755 47999999999
Q ss_pred CchhHHH------HHHHHH------HCCC--ceEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceE
Q 007247 441 KKPMEKQ------LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPI 504 (611)
Q Consensus 441 ~~~~~~~------l~~l~~------~~~~--~v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI 504 (611)
.+.++.. +..++. .+++ +|.+...|+..+++.++++||++++||+ +|+||+..+-+|.+|++.|
T Consensus 575 ~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~i 654 (796)
T 1l5w_A 575 APGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTV 654 (796)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEE
T ss_pred ChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeee
Confidence 8655544 777776 5667 8999999999999999999999999999 8999999999999999999
Q ss_pred EcCCcccccceec--CcceEEecccccccccCCccCHHHHH---HHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHH
Q 007247 505 VASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKK 578 (611)
Q Consensus 505 ~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~ 578 (611)
.+-.|...|+.++ .+|||+|| . +++++. .+..+..+-+. .+.+.++..+.+...|||... .+
T Consensus 655 GtLDGanvEi~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~ 722 (796)
T 1l5w_A 655 GTLDGANVEIAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HA 722 (796)
T ss_dssp ECSCTTHHHHHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TT
T ss_pred cCcCCeeeehhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HH
Confidence 9988998888765 46999994 2 555555 33322222221 246788888888999999986 88
Q ss_pred HHHHHHHHHH
Q 007247 579 WEETLLNLEV 588 (611)
Q Consensus 579 ~~~~~~~l~~ 588 (611)
|.++|.+++.
T Consensus 723 y~~Ly~~L~~ 732 (796)
T 1l5w_A 723 FDQMLHSIGK 732 (796)
T ss_dssp THHHHHHTST
T ss_pred HHHHHHHHhc
Confidence 9999999864
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=266.68 Aligned_cols=473 Identities=15% Similarity=0.138 Sum_probs=312.6
Q ss_pred ccccHHHHhccchHHHHhCCCeEEEEeecCCcc--------------cccCCC----------ceEEEEEeCCeeeEEEE
Q 007247 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY--------------KDAWDT----------DVVIELKVGDKIEKVRF 154 (611)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~--------------~~~~~~----------~~~~~~~~~~~~~~~~~ 154 (611)
..||+|+........++..|.-.+-+..+|... .+.|.. ...+.+++++..-..-.
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 579999999999999999999999998887521 121211 22344455543211111
Q ss_pred EEeeecC-----ce---EEEEeCc-cch-h-------------hhcCCCC-ccccCCCCCCCCcchHHHH---HHHHHHH
Q 007247 155 FHCHKRG-----VD---RVFVDHP-WFL-A-------------KVWGKTQ-SKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (611)
Q Consensus 155 ~~~~~~g-----v~---~~~i~~~-~~~-~-------------~~~~~~~-~~iy~~~~~~~~~~~~~r~---~~~~~~~ 207 (611)
......| +. .+..... .|. . +.+.+.- ..+|+..+ .+....+|+ .+|+.+.
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~--~~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDT--TYEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCS--SHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCC--CcchHHHHHHhHHHHHHHH
Confidence 1112212 11 1111100 010 0 0000000 13554321 122235555 5778888
Q ss_pred HHh-hHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-HHHHhccCCCC-----C--CCceEEEEEecCccccc--cCc
Q 007247 208 LEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAF 276 (611)
Q Consensus 208 ~~~-~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-----~--~~~k~v~~iH~~~~~~~--~~~ 276 (611)
++. ++.+..... -+..--+|| +||+||||+++++. +++.....+|+ + .+.+++||+|++.++|. |+.
T Consensus 270 lq~ilr~~~~~~~-~l~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~ 347 (796)
T 2c4m_A 270 LQAMIQDHLAHHK-DLSNFAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDE 347 (796)
T ss_dssp HHHHHHHHHHHSS-CSTTHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEH
T ss_pred HHHHHHHHHHhCC-ChhhcCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCH
Confidence 874 554311000 000000478 99999999999888 66544211111 0 36789999999999986 665
Q ss_pred ccccccC---------CCcccccccccccC------CCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCccc
Q 007247 277 EDFGLLN---------LPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVEL 341 (611)
Q Consensus 277 ~~~~~~~---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~ 341 (611)
..+..+- ++..+........+ .........+++++.++..|+.|.+||+-+.+.+... .++ ..
T Consensus 348 ~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~-~f~-~~ 425 (796)
T 2c4m_A 348 QIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE-TLA-DW 425 (796)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT-TTH-HH
T ss_pred HHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh-hhh-hH
Confidence 5543211 11111110000000 0000012357899999999999999999999999852 222 11
Q ss_pred chhhhccceeEeeCCcccCCc----CCCCccccccccC-----------------cch------hhhccHHHHHH----H
Q 007247 342 DNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLKEA----L 390 (611)
Q Consensus 342 ~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~----~ 390 (611)
-. +.+.++..|.||||...| +|..++.+...|+ ..+ +.+.|..+|.+ +
T Consensus 426 ~~-~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l 504 (796)
T 2c4m_A 426 YA-LWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWI 504 (796)
T ss_dssp HH-HCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-cCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 234589999999999999 7877777766666 443 34566667777 5
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCCCchhHHH------HHHHHH-
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------LEQLEI- 453 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-li~a~~~l~~---------~~~~lvivG~g~~~~~~~------l~~l~~- 453 (611)
+++.|++.+++.++++++.|+.++||+++ ++..+.++.+ .++++++.|++.+.++.. +..++.
T Consensus 505 ~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~ 584 (796)
T 2c4m_A 505 LERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADL 584 (796)
T ss_dssp HHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999 8888877753 379999999998655544 777776
Q ss_pred -----HCCC--ceEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCcccccceec--CcceE
Q 007247 454 -----LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGF 522 (611)
Q Consensus 454 -----~~~~--~v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~ 522 (611)
.+++ +|.+...|+..+++.++++||++++||+ +|+||+..+-+|.+|++.|.+-.|...|+.++ .+|||
T Consensus 585 in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF 664 (796)
T 2c4m_A 585 VNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAY 664 (796)
T ss_dssp HHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSE
T ss_pred hccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEE
Confidence 6777 8999999999999999999999999999 89999999999999999999998998888765 46999
Q ss_pred EecccccccccCCccCHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 523 QMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 523 l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+||. ...++.++..+ .+..+-+. .+.+.++..+.+...|||... .+|.++|.+++.
T Consensus 665 ~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 665 IFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp EESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred EecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 9952 23567777665 44433221 135777777777899999988 889999999874
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-27 Score=254.38 Aligned_cols=294 Identities=15% Similarity=0.140 Sum_probs=208.2
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCccc-ccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
.+| |||+|||+..+++.+++... +++|+++++|... +... +..+ |
T Consensus 123 ~~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pf-----p~~~~~~~l--p-------------------- 168 (482)
T 1uqt_A 123 DDD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPF-----PTPEIFNAL--P-------------------- 168 (482)
T ss_dssp TTC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCC-----CCHHHHTTS--T--------------------
T ss_pred CCC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCCC-----CCHHHHhhC--c--------------------
Confidence 369 99999999999999888753 5899999999532 2110 0000 0
Q ss_pred chhHhHHHhhhccEEEecCHHHHHHHHcCcC--CCccc------chhhhccceeEeeCCcccCCcCCCCccccccccCcc
Q 007247 306 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (611)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~------~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~ 377 (611)
....+...+..+|.+.+.+..+.+.+.+... .+.+. ...-+..++.+||||+|.+.|.+....
T Consensus 169 ~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~--------- 239 (482)
T 1uqt_A 169 TYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG--------- 239 (482)
T ss_dssp THHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS---------
T ss_pred cHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC---------
Confidence 0122334556789998888877766542110 11100 000123478999999998877532100
Q ss_pred hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCC----c---hh
Q 007247 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PM 444 (611)
Q Consensus 378 ~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~----~---~~ 444 (611)
..... ...++++++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .+
T Consensus 240 ---~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l 310 (482)
T 1uqt_A 240 ---PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (482)
T ss_dssp ---CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHH
T ss_pred ---cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHH
Confidence 00011 346777776 45799999999999999999999999865 2 57899999632 1 24
Q ss_pred HHHHHHHHHH----CC----CceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCcc
Q 007247 445 EKQLEQLEIL----YP----EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGG 510 (611)
Q Consensus 445 ~~~l~~l~~~----~~----~~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg 510 (611)
.+.+++++.+ ++ ..+.++ +.++.+.+..+|+.||++++||..||||++++|||+||+ |+|+|+.+|
T Consensus 311 ~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G 390 (482)
T 1uqt_A 311 RHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (482)
T ss_dssp HHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG
T ss_pred HHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC
Confidence 5556655433 11 125543 456788888999999999999999999999999999997 899999888
Q ss_pred cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 511 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 511 ~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
..+.+. +|+++ +|.|++++|++|.+++++. ++.+.++++++. .+.|||+..++++++.|+++
T Consensus 391 ~~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 391 AANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CHHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 888883 78887 9999999999999999862 344555555443 35699999999999999876
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=249.88 Aligned_cols=224 Identities=14% Similarity=0.068 Sum_probs=168.1
Q ss_pred HhHHHhh-hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHH
Q 007247 309 WMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 309 ~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
+.+..+. .+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+....
T Consensus 142 ~~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------ 194 (375)
T 3beo_A 142 MNRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------ 194 (375)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------
T ss_pred hhhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------
Confidence 3344343 599999999999999875 565544 89999999 787655432100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCC-chhHHHHHHHHHHCCCceEEe
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGV 462 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~ 462 (611)
+..+++++ + ++.++++++||+.+. ||++.+++|++++.+ +++++++ |.|+ ..+.+.++++... .+++.+.
T Consensus 195 ~~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~ 268 (375)
T 3beo_A 195 SHPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLI 268 (375)
T ss_dssp CCHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEE
T ss_pred hHHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEe
Confidence 11233332 2 244578899999886 999999999999865 6888655 6564 2345556655322 2468877
Q ss_pred cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHH
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 541 (611)
+......+..+|+.||++++|| |.+++|||+||+|||+++. ||..|+++++ +|+++ ++ |+++
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~ 331 (375)
T 3beo_A 269 EPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEET 331 (375)
T ss_dssp CCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHH
T ss_pred CCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHH
Confidence 7666667888999999999999 7789999999999999964 9999999887 99986 65 9999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 542 VSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 542 la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++++|.+++++ ++.+.+|++++. .+.|+|+.+++.++++++
T Consensus 332 la~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 332 IFSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99999999997 777778776652 367899999988887763
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=263.97 Aligned_cols=214 Identities=14% Similarity=0.072 Sum_probs=166.8
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
.+|.++++|+...+ ++ .++.+|||.++.....+... ....++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 21 17899999543321111100 111355677
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEe-CCCchhHHHHHHHHHHCC---CceEEecccChHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 469 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 469 (611)
++.+ .+++++||+.+ ||++.+++++.++.+ ++++|+|+| +|+ ..+.++++..+++ +++.+.+..+.+.
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 7632 35669999999 999999999999865 799999999 676 5677777776653 5688888888777
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEE-------cCCc-------ccccceecCcceEEecccccccccCC
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~l~~~~~~~~~~v~ 535 (611)
+..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |+.|+|.
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~------------------- 506 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV------------------- 506 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-------------------
Confidence 88999999999999999 999999999999999999 9999 8888763
Q ss_pred ccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH-----HhhCCchHHHHHHHHHHHHHHHcCCCC
Q 007247 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGM-----AQDLSWKGPAKKWEETLLNLEVAGSEP 593 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~~~~l~~~~~~~ 593 (611)
+|+++++++|.+++++ ++.+.+|++++. .+.|||+.++++++++|++++......
T Consensus 507 -~~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~ 566 (568)
T 2vsy_A 507 -ADDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHGWL 566 (568)
T ss_dssp -SSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred -CCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 2889999999999998 777777776653 367999999999999999998765433
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=248.56 Aligned_cols=283 Identities=15% Similarity=0.076 Sum_probs=195.1
Q ss_pred CCCeEEEecCC-ccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDW-HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~-~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
+|| +||+|+. ...+....+... .++|++++.|+...... + . + .
T Consensus 86 ~pD-vv~~~~~~~~~~~~~~~a~~-------~~ip~v~~~~~~~~~~~--------------~-~----------~---~ 129 (384)
T 1vgv_A 86 KPD-VVLVHGDTTTTLATSLAAFY-------QRIPVGHVEAGLRTGDL--------------Y-S----------P---W 129 (384)
T ss_dssp CCS-EEEEETTCHHHHHHHHHHHT-------TTCCEEEESCCCCCSCT--------------T-S----------S---T
T ss_pred CCC-EEEEeCCchHHHHHHHHHHH-------HCCCEEEEecccccccc--------------c-C----------C---C
Confidence 699 8999864 333333333332 48999998885321000 0 0 0 0
Q ss_pred chhHhHHH-hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhcc
Q 007247 306 KINWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 306 ~~~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
...+.+.. .+.+|.++++|+..++.+.+ +|++.+ ++.+++||+ |...+.+... ...
T Consensus 130 ~~~~~~~~~~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~ 187 (384)
T 1vgv_A 130 PEEANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSS 187 (384)
T ss_dssp THHHHHHHHHTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTC
T ss_pred chHhhHHHHHhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccc
Confidence 11223333 34599999999999998875 566544 789999995 4321111000 000
Q ss_pred HHHHHHHHHHhC-CCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCce
Q 007247 384 PLLKEALQAEVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (611)
Q Consensus 384 ~~~~~~~~~~~g-l~~~~~~~~il~iGrl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (611)
......+++++| ++.+ +.++++++||+.++ ||++.+++|++++.+ ++++|++++.....+.+.++++.... +++
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v 265 (384)
T 1vgv_A 188 DKLRSELAANYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNV 265 (384)
T ss_dssp HHHHHHHHTTCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTE
T ss_pred hhhhHHHHHhccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCE
Confidence 001234566677 6432 33578899999986 999999999999865 68999886332223566666664332 468
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccC
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d 538 (611)
.+.+....+.+..+|+.||++++|| |.+++|||+||+|||+++. ||..|++++| +|+++ ++ |
T Consensus 266 ~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d 328 (384)
T 1vgv_A 266 ILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-D 328 (384)
T ss_dssp EEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-S
T ss_pred EEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-C
Confidence 7765555567778999999999999 4458999999999999986 9999999888 99987 66 9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++++++|.+++++ ++.+.+|++++. .+.|+|+.+++.++++|++++.
T Consensus 329 ~~~la~~i~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 329 KQRIVEEVTRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred HHHHHHHHHHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 99999999999997 777888876653 4678999999999888877664
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=215.47 Aligned_cols=184 Identities=30% Similarity=0.511 Sum_probs=156.9
Q ss_pred EeeCCcccCCcC--CCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhcc
Q 007247 352 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 428 (611)
Q Consensus 352 vI~Ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~li~a~~~l~ 428 (611)
+||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++++.++.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 489999999998 7531 1122356788999987 345999999999 9999999999999995
Q ss_pred --c--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEE-ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCce
Q 007247 429 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 503 (611)
Q Consensus 429 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~Pv 503 (611)
+ ++++|+|+|.+++.+.+.++++..+++ ++.+ .+..+.+.+..+++.||++++||.+|+||++++|||+||+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 4 689999999988667788888888877 7888 888888888899999999999999999999999999999999
Q ss_pred EEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Q 007247 504 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 566 (611)
Q Consensus 504 I~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~ 566 (611)
|+++.|++.|++ ++.+|+++ +++|+++++++|.++++ + ++.+.+|++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 89999987 89999999999999999 8 777777777764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-25 Score=239.06 Aligned_cols=293 Identities=14% Similarity=0.161 Sum_probs=212.5
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccc-cccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
-| +|..||+|..++|.+++... +++++.|.+|.. ||...+ . -+|.. .
T Consensus 150 ~D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~--~Lp~~------------------~ 197 (496)
T 3t5t_A 150 DP-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWR--ILPKE------------------I 197 (496)
T ss_dssp SC-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHT--TSCHH------------------H
T ss_pred CC-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHh--hCcHh------------------H
Confidence 47 99999999999999999876 789999999943 322110 1 01100 0
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcC--C-Ccccch-------hhhccceeEeeCCcccCCcCCCCccccccccCc
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGED--K-GVELDN-------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~-g~~~~~-------~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 376 (611)
...+-.++..+|.|.+.++.+++.+.+.+. . |.+.+. .-+..++.++|+|+|+..|.+....
T Consensus 198 r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-------- 269 (496)
T 3t5t_A 198 RTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-------- 269 (496)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC--------
T ss_pred HHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH--------
Confidence 133456788999999999999987654221 1 322110 0123478899999999998765320
Q ss_pred chhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C---CcEEEEEeCCC-------chh
Q 007247 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTGK-------KPM 444 (611)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~---~~~lvivG~g~-------~~~ 444 (611)
...+++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|... .++
T Consensus 270 ---------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l 334 (496)
T 3t5t_A 270 ---------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADY 334 (496)
T ss_dssp ---------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHH
T ss_pred ---------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHH
Confidence 0134666666 457999999999999999999999 7754 4 36788887421 134
Q ss_pred HHHHHHHHHHC----CC-ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcC---CceEEcCCccccccee
Q 007247 445 EKQLEQLEILY----PE-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVE 516 (611)
Q Consensus 445 ~~~l~~l~~~~----~~-~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~ 516 (611)
.+++++++.+. +. .+.+.+..+.+.+..+|+.||++++||..||||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 335 ~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~ 414 (496)
T 3t5t_A 335 VHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG 414 (496)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG
T ss_pred HHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC
Confidence 55666665432 11 4777777778888899999999999999999999999999997 8999999999888884
Q ss_pred cCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007247 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 517 ~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.+|+++ +|.|++++|++|.++|+++ ++++.++.++. ....+++...++.+++-+.....
T Consensus 415 --~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~ 475 (496)
T 3t5t_A 415 --EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHA 475 (496)
T ss_dssp --GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhccc
Confidence 368887 9999999999999999984 33334443333 35789999999999888877654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=247.06 Aligned_cols=338 Identities=17% Similarity=0.174 Sum_probs=249.5
Q ss_pred CCCeEEEecCCccchHHH-HHHHhccCCCCC-------CCceEEEEEecCccccc--cCcccccccCCCccc--------
Q 007247 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQF-------- 288 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~~-------~~~k~v~~iH~~~~~~~--~~~~~~~~~~~~~~~-------- 288 (611)
.|| +||+||||+++++. +++..+..+++- ....++||+|++.++|. |+...+..+- |..+
T Consensus 320 ~p~-viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lL-Pr~~~ii~~in~ 397 (824)
T 2gj4_A 320 DKV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLL-PRHLQIIYEINQ 397 (824)
T ss_dssp HHE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHC-HHHHHHHHHHHH
T ss_pred CCc-EEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhC-chHHHHHHHHHH
Confidence 478 99999999999888 665543222210 23459999999999998 8766654321 1110
Q ss_pred ----------------ccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeE
Q 007247 289 ----------------KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 352 (611)
Q Consensus 289 ----------------~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~v 352 (611)
...+..++.- ....+++++.++..|+.|.+||+-+.+.+... .++ +.-. ..+.++..
T Consensus 398 ~f~~~~~~~~~~~~~~~~~~~~i~~~----~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~ 470 (824)
T 2gj4_A 398 RFLNRVAAAFPGDVDRLRRMSLVEEG----AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQN 470 (824)
T ss_dssp HHHHHHHHHSTTCHHHHHHHCSEECS----SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEE
T ss_pred HHHHHHHHHcCCcHHHHHhhhhhhhc----CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhccc
Confidence 0001111100 12467899999999999999999999999742 222 1111 23458999
Q ss_pred eeCCcccCCc----CCCCccccccc-----------------cCc-chhh----hccHHHHHH----HHHHhCCCCCCCC
Q 007247 353 IVNGMDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNI 402 (611)
Q Consensus 353 I~Ngvd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----~~~~~gl~~~~~~ 402 (611)
|.||||...| +|..++.+... |.. .++. +.|..+|.+ ++++.|++.+++.
T Consensus 471 iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~ 550 (824)
T 2gj4_A 471 KTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNS 550 (824)
T ss_dssp CCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS
T ss_pred ccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCc
Confidence 9999999999 77666555544 654 2331 455556666 8899999999999
Q ss_pred cEEEEEcCcccccCHHHH-HHHHHhcc---c-C-----CcEEEEEeCCCchhHHH------HHHHHHHC------CC--c
Q 007247 403 PVIGFIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--K 458 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~l-i~a~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~ 458 (611)
++++++.|+.++||++++ +..+.++. + + +++|++.|++.+.++.. +..++..+ ++ +
T Consensus 551 l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lK 630 (824)
T 2gj4_A 551 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLR 630 (824)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEE
T ss_pred ceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceE
Confidence 999999999999999998 88887774 2 2 67999999998655444 77777644 45 7
Q ss_pred eEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCccccccee--cCcceEEecccccccccC
Q 007247 459 ARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAV 534 (611)
Q Consensus 459 v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~~~~~~v 534 (611)
+.+...|+..+++.++++||++++||+ +|+||+..+-||.+|++.|++-.|...|+.+ ..+|||+||
T Consensus 631 VvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG--------- 701 (824)
T 2gj4_A 631 VIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG--------- 701 (824)
T ss_dssp EEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS---------
T ss_pred EEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC---------
Confidence 899999999999999999999999999 8999999999999999999999998888764 356899984
Q ss_pred CccCHHHHHHHHH-------HHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 535 DPVDVAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 535 ~~~d~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
. .++++ ..+. .+.+. .+.+.++..+.+...|||... ++|..+|.+++.
T Consensus 702 -~-~~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 702 -M-RVEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp -C-CHHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred -C-cHHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 2 25555 3432 12222 356777777778899999998 889999999874
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=201.01 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=133.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+.+..+|+.||++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~ 78 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLY 78 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEE
Confidence 3689999999999999999999999965 699999999987 467777777776666666 666778888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCC-ceEE-cCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 558 (611)
++||.+|+||++++|||+||+ |||+ ++.|+..+++.++.+ ++ +++|+++++++|.+++++ ++.+
T Consensus 79 v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~ 144 (166)
T 3qhp_A 79 VHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLER 144 (166)
T ss_dssp EECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHH
T ss_pred EECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHH
Confidence 999999999999999999998 9999 568999999988766 33 889999999999999997 7777
Q ss_pred HHHHHHHH--HhhCCchHHHHH
Q 007247 559 AEMMKNGM--AQDLSWKGPAKK 578 (611)
Q Consensus 559 ~~~~~~~~--~~~fsw~~~a~~ 578 (611)
.++++++. .++|||+.++++
T Consensus 145 ~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 145 ERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHCChhhhhcC
Confidence 77777663 488999998764
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-22 Score=210.72 Aligned_cols=221 Identities=14% Similarity=0.052 Sum_probs=162.9
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
...+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+. +..+++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~~ 193 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLPE 193 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCCT
T ss_pred HHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHHH
Confidence 45689999999999999885 566544 788999864 42111000 000111
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHH
Q 007247 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 469 (611)
Q Consensus 393 ~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 469 (611)
++ + ++.++++++||+..+||++.+++|++++.+ ++++++++ |++. ...+.++++... .+++.+.+......
T Consensus 194 ~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 194 GL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYGS 267 (376)
T ss_dssp TC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHHH
T ss_pred hc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHHH
Confidence 11 1 234567789999989999999999999865 68998886 6553 345666666433 24677776555556
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
+..+|+.||+++.|| | |+ ++|||+||+|+|++ +.||..++++++ +|+++ + .|+++++++|.+
T Consensus 268 ~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~~ 330 (376)
T 1v4v_A 268 MAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVKG 330 (376)
T ss_dssp HHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHHH
T ss_pred HHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHHH
Confidence 778999999999999 2 44 88999999999997 478888887654 79875 4 599999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007247 549 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 591 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~~ 591 (611)
++++ ++.+.+|+++ .+.|+|...++++.+.+++++....
T Consensus 331 ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~~~~ 369 (376)
T 1v4v_A 331 LLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLGLGP 369 (376)
T ss_dssp HHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTTSSC
T ss_pred HHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhcccc
Confidence 9997 7778888753 4678888999999999998876433
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-21 Score=181.11 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=125.6
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCc--hhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
.+.++|+|+|++.+.||++.+++++.++ ++++|+|+|.++. .+.+.++++....++++.+.+..+.+.+..+++.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 3567899999999999999999999998 6899999999873 45555554444566789999888988888999999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
|++++||..|+||++++|||+||+|||+++.|+..|++.++.+|++ + +.|+++++++|.++++++
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999999999999999999999996 3 789999999999999984
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=189.77 Aligned_cols=186 Identities=13% Similarity=0.043 Sum_probs=137.1
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+++..+..+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 4566788999999999999999986 4543 688999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCc--------
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-------- 458 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~-------- 458 (611)
++ .+ +.+++++.|+ ..||.+.+++|++++.+ ++++|+|+|+|+. ..+.++++..+.+..
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777665 46899999999999965 6899999998863 224556666554421
Q ss_pred --eEEecccChHHHHHHHHHccEEEeCCCC-CCCcHHHHHHHHcCCceEEc-CCcccccceecC-cceEEeccccccccc
Q 007247 459 --ARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEA 533 (611)
Q Consensus 459 --v~~~~~~~~~~~~~i~~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~l~~~~~~~~~~ 533 (611)
+.. ..+. +.+..+|+.||++++||.+ |++|++++|||+||+|||++ +.+++.|++.+. .+|+++
T Consensus 260 ~~v~~-~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~--------- 328 (374)
T 2xci_A 260 GDVIL-VDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF--------- 328 (374)
T ss_dssp SSEEE-CCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE---------
T ss_pred CcEEE-ECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE---------
Confidence 222 2222 3456799999998888765 67899999999999999985 689999988763 467776
Q ss_pred CCccCHHHHHHHHHHHHHh
Q 007247 534 VDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 534 v~~~d~~~la~~i~~ll~~ 552 (611)
.++|+++|+++|.+++++
T Consensus 329 -~~~d~~~La~ai~~ll~d 346 (374)
T 2xci_A 329 -EVKNETELVTKLTELLSV 346 (374)
T ss_dssp -ECCSHHHHHHHHHHHHHS
T ss_pred -EeCCHHHHHHHHHHHHhH
Confidence 779999999999999986
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-18 Score=177.85 Aligned_cols=220 Identities=16% Similarity=0.082 Sum_probs=156.9
Q ss_pred CCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcC
Q 007247 257 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED 336 (611)
Q Consensus 257 ~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~ 336 (611)
.++|+++++||+.+.. +. .. . .....++..++.||.|+++|+.+++.+.+
T Consensus 101 ~~~k~i~~ihDl~pl~-~~----------~~-------------~---~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~--- 150 (339)
T 3rhz_A 101 YDIKIVLFIHDVVPLM-FS----------GN-------------F---YLMDRTIAYYNKADVVVAPSQKMIDKLRD--- 150 (339)
T ss_dssp SSCEEEEEESCCHHHH-CG----------GG-------------G---GGHHHHHHHHTTCSEEEESCHHHHHHHHH---
T ss_pred cCCEEEEEecccHHhh-Cc----------cc-------------h---hhHHHHHHHHHHCCEEEECCHHHHHHHHH---
Confidence 3899999999875521 10 00 0 12235678899999999999999999986
Q ss_pred CCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccC
Q 007247 337 KGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416 (611)
Q Consensus 337 ~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg 416 (611)
+|++.. ++..+++ |+...+.. .....+.++|+|+|++.....
T Consensus 151 ~G~~~~------ki~~~~~------~~~~~~~~--------------------------~~~~~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 151 FGMNVS------KTVVQGM------WDHPTQAP--------------------------MFPAGLKREIHFPGNPERFSF 192 (339)
T ss_dssp TTCCCS------EEEECCS------CCCCCCCC--------------------------CCCCEEEEEEEECSCTTTCGG
T ss_pred cCCCcC------ceeecCC------CCccCccc--------------------------ccccCCCcEEEEeCCcchhhH
Confidence 566533 4533332 21111000 001124478999999995322
Q ss_pred HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCC-------CCC
Q 007247 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-------EPC 489 (611)
Q Consensus 417 ~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~-------E~~ 489 (611)
+..+ .++++|+|+|+|+.. .++ ++.+.+.++.+.++.+++.+|+.++.... .++
T Consensus 193 -------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~ 253 (339)
T 3rhz_A 193 -------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYC 253 (339)
T ss_dssp -------GGGC-CCSSCEEEEESCCCC----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCC
T ss_pred -------HHhC-CCCCeEEEEeCCccc----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcC
Confidence 2223 378999999999853 244 79999999999999999999998886211 246
Q ss_pred cHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--H
Q 007247 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--A 567 (611)
Q Consensus 490 gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~ 567 (611)
|.+++||||||+|||+++.+++.++|+++++|+.+ .+.++++++|..+. ++.+.+|++++. .
T Consensus 254 P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------~~~~e~~~~i~~l~----~~~~~~m~~na~~~a 317 (339)
T 3rhz_A 254 SYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------KDVEEAIMKVKNVN----EDEYIELVKNVRSFN 317 (339)
T ss_dssp CHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------SSHHHHHHHHHHCC----HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------CCHHHHHHHHHHhC----HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999976 36889998888763 456788888874 3
Q ss_pred hhCCchHHHHHH
Q 007247 568 QDLSWKGPAKKW 579 (611)
Q Consensus 568 ~~fsw~~~a~~~ 579 (611)
+.++|....++.
T Consensus 318 ~~~~~~~f~k~~ 329 (339)
T 3rhz_A 318 PILRKGFFTRRL 329 (339)
T ss_dssp HHHHTTHHHHHH
T ss_pred HHhhccHHHHHH
Confidence 556666665544
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=9e-18 Score=179.65 Aligned_cols=226 Identities=12% Similarity=0.063 Sum_probs=160.7
Q ss_pred hHHHhh-hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 310 MKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 310 ~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+..+. .+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +
T Consensus 162 ~r~~~~~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~ 214 (403)
T 3ot5_A 162 NRQLTGVMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------H 214 (403)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------C
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------c
Confidence 344343 589999999999999986 677655 88888884 554333221100 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~-~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
...++++ + ++..++++.||.+. .|+++.+++|+.++.+ +++++++.+...+...+.++++.... .++.....
T Consensus 215 ~~~~~~l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~ 289 (403)
T 3ot5_A 215 HPILENL--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEP 289 (403)
T ss_dssp CHHHHSC--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECC
T ss_pred hHHHHhc--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCC
Confidence 1223333 2 23345667788754 3778999999999875 78999887432233556666543222 45777777
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecCcceEEecccccccccCCccCHHHHH
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 543 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 543 (611)
.....+..+|+.||+++.+| |.+.+|||++|+|+|+. +.++..|.++.| +|+++ .+ |+++++
T Consensus 290 l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~ 352 (403)
T 3ot5_A 290 LDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLI 352 (403)
T ss_dssp CCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHH
T ss_pred CCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHH
Confidence 77667778999999999888 55569999999999999 678888888665 88875 44 999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 544 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 544 ~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++.+++++ ++.+.+|+++ ...|.....+++..+++.+.+.
T Consensus 353 ~ai~~ll~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 353 KEALDLLDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 999999997 7777777654 3457777788888888887765
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=181.12 Aligned_cols=229 Identities=14% Similarity=0.076 Sum_probs=158.2
Q ss_pred hHHH-hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 310 MKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 310 ~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+.. -..+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.. ...+...+
T Consensus 159 ~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~-------------~~~~~~~~ 216 (396)
T 3dzc_A 159 NRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREK-------------IHTDMDLQ 216 (396)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHH-------------HHHCHHHH
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhh-------------cccchhhH
Confidence 3443 35789999999999999886 677655 78888885 3432111100 00000113
Q ss_pred HHHHHHhC-CCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEe
Q 007247 388 EALQAEVG-LPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGV 462 (611)
Q Consensus 388 ~~~~~~~g-l~~~~~~~~il~iGrl~~-~Kg~d~li~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~ 462 (611)
.++++++| ++.+ +..++++.+|.+. .|+++.+++|++++.+ +++++++. |.+ +...+.++++... ..++...
T Consensus 217 ~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~~ 293 (396)
T 3dzc_A 217 ATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVLI 293 (396)
T ss_dssp HHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEEE
T ss_pred HHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEEe
Confidence 66778888 4432 2334455656543 4789999999999875 68999886 544 3355566654322 2457776
Q ss_pred cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecCcceEEecccccccccCCccCHHH
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 541 (611)
..........+|+.||+++.+| + | +++|||++|+|+|++ +.++..|++++| +++++ . .|+++
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S---G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~~ 356 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS---G-G-IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQQ 356 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC---S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHHH
T ss_pred CCCCHHHHHHHHHhcCEEEECC---c-c-HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHHH
Confidence 6666555668999999999998 3 4 449999999999999 678888888777 56764 3 48999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 542 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 542 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
++++|.+++++ ++.+.+|++++ ..|.....++++.++++
T Consensus 357 l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 357 ICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 99999999998 77777777653 45777777777776654
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=183.61 Aligned_cols=160 Identities=15% Similarity=0.057 Sum_probs=120.5
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+..++++.|++. .++.+.+.++++.+.+.++++++++.+.. ..+.++ ..++++.+.+..+ ...+++.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEE
Confidence 345678889986 78888888888887666788887776542 111121 2345677766552 55799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCc----ccccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHhcC
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYG 554 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~~ 554 (611)
|.++ .+.+++|||++|+|+|+...+ +..+.+.+.++|+++ +++ |+++++++|.+++++
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~-- 376 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE-- 376 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--
Confidence 9765 348999999999999996654 467888888899986 666 899999999999998
Q ss_pred HHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007247 555 TQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 555 ~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~ 585 (611)
++.+.+|++.+ +.+.++|+.+++.+++++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 377 ESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 66666666554 45778999999999988753
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-15 Score=154.17 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=107.4
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
.++++.|++...+..+.+.+++..+.. .+++++++. |...++. +.+.....+.++.... |..+ +..+|+.||++|
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~-G~~~~~~-~~~~~~~~~~~~~v~~-f~~d-m~~~l~~aDlvI 257 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQA-GRQHAEI-TAERYRTVAVEADVAP-FISD-MAAAYAWADLVI 257 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEEC-CTTTHHH-HHHHHHHTTCCCEEES-CCSC-HHHHHHHCSEEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEec-Ccccccc-ccceeccccccccccc-chhh-hhhhhccceEEE
Confidence 345566788888888999999999865 456655433 3332433 3334445554555443 3333 557999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCccc--------ccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 551 (611)
.-+ -++++.|+|++|+|+|....... .+.+.+.+.|+++ +.. ++++|+++|.++++
T Consensus 258 ~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll~ 323 (365)
T 3s2u_A 258 CRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVLM 323 (365)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred ecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHHC
Confidence 543 36899999999999998765432 2345566678875 433 68999999999999
Q ss_pred hcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
| ++.+.+|++++.. +.....+++..+.++++.
T Consensus 324 d--~~~~~~m~~~a~~--~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 324 H--PETLRSMADQARS--LAKPEATRTVVDACLEVA 355 (365)
T ss_dssp C--THHHHHHHHHHHH--TCCTTHHHHHHHHHHHHC
T ss_pred C--HHHHHHHHHHHHh--cCCccHHHHHHHHHHHHH
Confidence 8 7888899888643 333334555555555443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.7e-15 Score=158.27 Aligned_cols=161 Identities=12% Similarity=0.058 Sum_probs=111.5
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+.+++++.|++. .++.+.+.++++.+.+ +++++ +++|.+.. .+.++ ..++++...+..+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~--~~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVT--PAELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---C--GGGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC--hHHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788999998 5666665555555544 57888 46787652 11121 245668776655543 5899999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 552 (611)
+++..+- +++++|||++|+|+|+...++ ..+.+.+.+.|+.+ +++ |+++++++|.+++++
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 9987542 379999999999999998765 45667777889976 555 889999999999987
Q ss_pred cCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++.+.++++.+ +.+.++++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 55555555443 3456788988888888776543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=161.49 Aligned_cols=153 Identities=13% Similarity=0.110 Sum_probs=99.8
Q ss_pred CCcEEEEEcCccccc----------CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 401 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 401 ~~~~il~iGrl~~~K----------g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
..+++++.|++...| .++.+++++.++ ++++++++++.. .+.++ ..++++......+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 345778889996544 466666666665 789999887652 22222 3466787776653 4
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc----CCcccccceecCcceEEecccccccccCCcc--CHHHHHH
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 544 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~ 544 (611)
..+++.||++|. ++-+.+++|||++|+|+|+. +..+..+.+.+.++|+++ ++. |++++++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 468999999995 44478999999999999994 445677888888999986 655 7899999
Q ss_pred HHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 581 (611)
+|.+++++ +..+.+|.+.+ +.+..+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 55555555544 4577888888877653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-14 Score=151.51 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=109.3
Q ss_pred CcEEEEEcCcccccCH-HHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~-d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..++++.|++...|+. ..+++++.+..+ ++++++++|++.. .+.++ ..+.++......+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3566777998765443 555555544422 5899999987652 11121 345567766554433 46799999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEc----CCcccccceecCcceEEecccccccccCCc----cCHHHHHHHHHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 551 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~----~d~~~la~~i~~ll~ 551 (611)
+|.. +-+.+++|||++|+|+|+. +..+..+.+.+.+.|+++ ++ .|+++++++|.++++
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 9953 4457999999999999994 445567778888899986 66 689999999999999
Q ss_pred hcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 552 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~ 584 (611)
+ +..+.+|.+.+ +....+++.+++.+++++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 8 55555554433 4577888888887776543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.6e-13 Score=144.37 Aligned_cols=154 Identities=13% Similarity=0.083 Sum_probs=109.4
Q ss_pred CCcEEEEEcCcccc-cCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 401 NIPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 401 ~~~~il~iGrl~~~-Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+.+++++.|++... ++.+.+.++++.+.+.++++++++++.. .+.++ ..+.++......+ ...+++.||+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~ 302 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTA 302 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSE
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCE
Confidence 34577888999665 4655555555555445899999988753 11111 3456787776653 3468999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEE----cCCcccc--cceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 551 (611)
+|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+.+.|+.+ ++. +.++++ ++++
T Consensus 303 ~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 303 VVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIG 364 (398)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHH
T ss_pred EEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHc
Confidence 9953 445799999999999999 5667788 889888999986 555 566666 7788
Q ss_pred hcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 552 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
+ +..+.+|.+.+ +....+|+.+++.+++++
T Consensus 365 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 D--ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp C--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 7 55555555444 467889999998887765
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-12 Score=138.10 Aligned_cols=157 Identities=15% Similarity=0.066 Sum_probs=106.9
Q ss_pred CCcEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEE-EeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 401 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 401 ~~~~il~iGrl~~~K--g~d~li~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
...++++.|+....+ .+..+++++.. .++++++ +|++.. .+.++ ..+.++......+.. .+++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFAD---TPWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTT---SSCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhc---CCcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 345678889987655 34444444443 3577666 555431 11111 245667766655543 699999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-----cccccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVAST-----GGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-----gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll 550 (611)
|++|..+- ..+++|||++|+|+|+... .+..+.+.+.+.|..+ ..+ ++++++++|.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99997653 3788999999999995543 4667777888899876 555 8999999999999
Q ss_pred HhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007247 551 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 551 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~ 585 (611)
++ +..+.++.+.+ +.+..+++..++.+++++.+
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 98 55444444333 45667888888888887754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.7e-12 Score=137.07 Aligned_cols=157 Identities=14% Similarity=0.042 Sum_probs=105.1
Q ss_pred CCcEEEEEcCcccccC--HHHHHHHHHhcccCCcEEEE-EeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 401 NIPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg--~d~li~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
...++++.|+...... +..+++++.++ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 3456778898864432 44444444443 588877 565431 11111 245667776555543 689999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEc----CCcccccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 551 (611)
|++|..+- ..+++|||++|+|+|+. +.....+.+.+.+.|..+ ..+ ++++++++|.++++
T Consensus 315 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 99997642 36889999999999995 444466777777888875 554 89999999999999
Q ss_pred hcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 552 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~ 585 (611)
+ +..+.++.+.+ +....+++..++.+++++..
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 8 55555444333 45667888888887777653
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.9e-13 Score=142.60 Aligned_cols=190 Identities=19% Similarity=0.140 Sum_probs=132.2
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
..+|.+++.++..++.+.+ .|++.+ ++.++.|. +|...+. .....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchhHHHHH
Confidence 4689999999999999886 677655 78888874 3421110 011234467888
Q ss_pred hCCCCCCCCcEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCCchhHHHHHHH-H-HHCCCceEEecccCh
Q 007247 394 VGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGVAKFNI 467 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~---~~Kg~d~li~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~v~~~~~~~~ 467 (611)
+|++. +..+++..+|.+ ..|+++.+++|+.++.+. ++++++... +...+.++++ . .....++.....+..
T Consensus 198 lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 99864 335666677764 347899999999998653 687777543 3355555554 2 111235766656666
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
.....+++.||+++.+| |.++.||+++|+|+|+.... +..|.++.| +++++ . .|.+++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv----------~-~d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS----------G-FKAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC----------C-SSHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc----------C-CCHHHHHHHH
Confidence 56678999999999777 55789999999999998654 357777665 66654 3 4899999999
Q ss_pred HHHHHh
Q 007247 547 RRALAT 552 (611)
Q Consensus 547 ~~ll~~ 552 (611)
.+++++
T Consensus 337 ~~ll~d 342 (385)
T 4hwg_A 337 KTITEE 342 (385)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 999987
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=8.7e-12 Score=131.75 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=104.8
Q ss_pred CcEEEEEcCcccc-------cCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH
Q 007247 402 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 402 ~~~il~iGrl~~~-------Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
..++++.|++... +.++.+++++.++ ++++++++++. ..+.++. .++++.. ...+. .+++
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 4578889999865 6778888888765 78888876542 2222322 3456766 44432 3588
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHH
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 548 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ 548 (611)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. +.++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999763 3468999999999999998754 66667777789876 543 78999999999
Q ss_pred HHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 549 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
++++ +..+.++.+.+ +...-.-+.+++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9997 55555554433 233344555555444443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.24 E-value=3e-10 Score=122.52 Aligned_cols=154 Identities=16% Similarity=0.093 Sum_probs=106.2
Q ss_pred CcEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 402 ~~~il~iGrl~~-----~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
..++++.|++.. .|.+..+++++..+ ++++++++.+.. . +.++ ..++++......+. ..++..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~-~~l~----~~~~~v~~~~~~~~---~~ll~~ 335 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-L-EGVA----NIPDNVRTVGFVPM---HALLPT 335 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-T-SSCS----SCCSSEEECCSCCH---HHHGGG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-h-hhhc----cCCCCEEEecCCCH---HHHHhh
Confidence 347788899875 48888999999876 688888776542 1 1111 24566776655553 357899
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll 550 (611)
||++|.. +-+.+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. ++++++++|.+++
T Consensus 336 ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 336 CAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVL 401 (441)
T ss_dssp CSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred CCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHh
Confidence 9999963 33579999999999999998743 56667777889876 544 8899999999999
Q ss_pred HhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 551 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 551 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
++ +..+.++.+.+ +.....++.+++.+++++
T Consensus 402 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 402 DD--PAHRAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 97 55555554433 356677777777776654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-08 Score=108.50 Aligned_cols=157 Identities=9% Similarity=-0.017 Sum_probs=99.1
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+..++++.|+.. .+..+.+.++++.+.+.+++++ ++|.+.. . +.+ ...++++......+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-~-~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVD-P-ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSC-G-GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCC-h-HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 345677889887 4444444444454544577874 4676542 1 111 1245667766554443 58999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~ 553 (611)
+|..+ -.++++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. +.++++++|.+++++
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 88632 2379999999999999997643 34556667788875 544 889999999999987
Q ss_pred CHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 554 GTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 554 ~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
++.+.++.+.+ +......+..++.+++++
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 54444443322 233444555555555544
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-08 Score=106.85 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=90.6
Q ss_pred CcEEEEEcCccccc-CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 402 IPVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 402 ~~~il~iGrl~~~K-g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.+++++.|++...+ +.+.+.+++..+.+.+.++++.+.+... ......++++......+. ..++..||++
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~v~~~~~~p~---~~lL~~~~~~ 308 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL------ALLGELPANVRVVEWIPL---GALLETCDAI 308 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC------CCCCCCCTTEEEECCCCH---HHHHTTCSEE
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc------cccccCCCCEEEEeecCH---HHHhhhhhhe
Confidence 35666788876544 3455556666666667888777655421 011234566765555443 2578999998
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
|.- +-..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+..+++|.++|+| +.
T Consensus 309 v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~--~~~~~~al~~lL~d--~~ 370 (400)
T 4amg_A 309 IHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EA--GSLGAEQCRRLLDD--AG 370 (400)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CT--TTCSHHHHHHHHHC--HH
T ss_pred ecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CC--CCchHHHHHHHHcC--HH
Confidence 842 34578999999999999965443 44556666678764 33 34467899999997 43
Q ss_pred HHHHHH--HHHHHhhCCchHHHHHHHH
Q 007247 557 ALAEMM--KNGMAQDLSWKGPAKKWEE 581 (611)
Q Consensus 557 ~~~~~~--~~~~~~~fsw~~~a~~~~~ 581 (611)
.+..+. ++.++..=+....++.+++
T Consensus 371 ~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 371 LREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 222211 1123333355555555544
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=8.4e-08 Score=102.09 Aligned_cols=158 Identities=13% Similarity=0.054 Sum_probs=100.4
Q ss_pred CCcEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 401 NIPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 401 ~~~~il~iGrl~-~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..+++++.|++. ..+..+.+++++.++ ++++++.++... .. . ...+.++......+. ..++..||+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~---~~ll~~~d~ 287 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNH---QVLFGRVAA 287 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCH---HHHGGGSSE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCH---HHHHhhCcE
Confidence 346778889988 667778888888776 677777654331 10 0 123556776655443 357899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCccc----ccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~ 555 (611)
+|..+- ..++.||+++|+|+|+....+- .+.+.+.+.|..+. ....+.++++++|.++++ +
T Consensus 288 ~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~ll~---~ 352 (404)
T 3h4t_A 288 VVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHD--------GPTPTVESLSAALATALT---P 352 (404)
T ss_dssp EEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHHTS---H
T ss_pred EEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccC--------cCCCCHHHHHHHHHHHhC---H
Confidence 995442 3789999999999999865442 33455666788650 122378999999999986 3
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 556 QALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 556 ~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
..+..+.+. .+.+.- .-+++..+.+++++..
T Consensus 353 ~~~~~~~~~--~~~~~~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 353 GIRARAAAV--AGTIRT-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHHH--HTTCCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH--HHHHhh-hHHHHHHHHHHHHHhh
Confidence 333333322 233433 4455555555555543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=111.84 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=121.7
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEE--EEeCCCc---hhHHHHHHHHHHCCCceEEeccc
Q 007247 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGKK---PMEKQLEQLEILYPEKARGVAKF 465 (611)
Q Consensus 393 ~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lv--ivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~ 465 (611)
.+|++.+.+.++++..+++ .|..+.+++++.++.+ |+..+. ++|.+.. ...+.+.+.... +++.+.+..
T Consensus 432 ~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~~ 507 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPHS 507 (631)
T ss_dssp CCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECCC
T ss_pred cccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCCC
Confidence 3566644346778888875 6889999999998876 666553 3674332 223333333333 468888777
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccccee------cCcceEEecccccccccCCccCH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDV 539 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~l~~~~~~~~~~v~~~d~ 539 (611)
+.+.....++.+|++|-|+.+++ |++.+|||+||+|||+....++..-+. -|-.+++ -..|.
T Consensus 508 p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~L-----------IA~d~ 575 (631)
T 3q3e_A 508 PYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWL-----------IANTV 575 (631)
T ss_dssp CHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGG-----------EESSH
T ss_pred CHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcce-----------ecCCH
Confidence 77776689999999999998755 999999999999999987665554442 1222321 13679
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----hCCchHHHHHHHHHHHHHHH
Q 007247 540 AAVSTTVRRALATYGTQALAEMMKNGMAQ-----DLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 540 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~-----~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++++...++..| ++.+.++.++.... -|+ ...+++++.|++++.
T Consensus 576 eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 576 DEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 9999999999998 77777776665432 333 556677777776654
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.2e-08 Score=91.87 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=93.6
Q ss_pred CCcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH--H
Q 007247 401 NIPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 475 (611)
Q Consensus 401 ~~~~il~iGrl~---~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~ 475 (611)
...++++.|++. +.|.+..+++++.++ +.++++++++... ...+.++......+.. .++ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~ 85 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHP 85 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTST
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCC
Confidence 346788899985 678888888888765 5788888765421 1245568777666553 355 9
Q ss_pred HccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc----ccccceecCcceEEecccccccccCCcc--CHHHHHHHHHHH
Q 007247 476 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRA 549 (611)
Q Consensus 476 ~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~l 549 (611)
.||++|.. +-+.+++|||++|+|+|+.... +..+.+.+.+.|+.+ ++. +.++++++|.++
T Consensus 86 ~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 86 KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRV 151 (170)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHH
T ss_pred CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHH
Confidence 99999964 3468999999999999999864 346667778889976 555 889999999999
Q ss_pred HHh
Q 007247 550 LAT 552 (611)
Q Consensus 550 l~~ 552 (611)
+++
T Consensus 152 l~~ 154 (170)
T 2o6l_A 152 IND 154 (170)
T ss_dssp HHC
T ss_pred HcC
Confidence 987
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-06 Score=90.92 Aligned_cols=155 Identities=13% Similarity=0.056 Sum_probs=101.0
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 402 ~~~il~iGrl~---~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
..++++.|++. ..+..+.++++++.+ +++++++ |.+... . ...++++......+. ..++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 45778889985 567778888888776 5677665 655421 1 234566766655543 3578999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
|++|.- +-..+++||+++|+|+|+....+ ..+.+.+.+.|+.+. .+..+.++++++|.++ ++
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 999963 22469999999999999976543 444566677888651 1235789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHH-HHHHH
Q 007247 554 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLEV 588 (611)
Q Consensus 554 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~-~~l~~ 588 (611)
+..+.++.+. .+.+.-..-. +..+.+ +.+..
T Consensus 370 -~~~~~~~~~~--~~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 370 -PETRARAEAV--AGMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp -HHHHHHHHHH--TTTCCCCHHH-HHHHHHHHHHHC
T ss_pred -HHHHHHHHHH--HHHHhhcCcH-HHHHHHHHHHhc
Confidence 5444444332 2333334444 555555 66554
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.15 E-value=1e-05 Score=86.01 Aligned_cols=155 Identities=17% Similarity=0.095 Sum_probs=106.2
Q ss_pred CcEEEEEcCc-ccccCHHHHHHHHHhcccCCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl-~~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..++++.|++ ...+..+.++++++++ +.+++++ |.+... . ...++++......+.. .++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 4678889999 5888889999999887 4566665 655421 0 2234567665555542 46899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCc--cCHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~--~d~~~la~~i~~ll~~~ 553 (611)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+.++++++|.++ ++
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 99643 2369999999999999987654 45566677788875 43 3789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 554 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 554 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+..+.++.+ ..+.+....-+++..+.+++++..
T Consensus 369 -~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 369 -PETHARATA--VAGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHH--HHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHH--HHHHHhhcChHHHHHHHHHHHHhc
Confidence 444444333 234456677777777878777654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0036 Score=71.34 Aligned_cols=182 Identities=13% Similarity=-0.015 Sum_probs=122.6
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC---CceEEeccc
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 465 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 465 (611)
|..+|||. +.+++++..++ .|=-+..++++.++.+ |+.+|++..... ..++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~--~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCT--TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCC--CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 56678885 44666666555 4555777777777766 899999887654 34556666666544 467777766
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC---cceEEecccccccccCCccCHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 542 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---~~G~l~~~~~~~~~~v~~~d~~~l 542 (611)
+.+..-..+..+|++|=|.-+ +-+.+.+||+.+|+|||+-....+..-+... ..|+ -++ -..|.++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl--------~e~-ia~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGC--------LEL-IAKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTC--------GGG-BCSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCC--------ccc-ccCCHHHH
Confidence 666555688999999987766 4489999999999999997643322211100 0011 011 23688999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH---HH--hhCCchHHHHHHHHHHHHHHHc
Q 007247 543 STTVRRALATYGTQALAEMMKNG---MA--QDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 543 a~~i~~ll~~~~~~~~~~~~~~~---~~--~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
.+...++..| ++.+.++.++- +. .-|+-+..++.+++.|+++...
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 9999998888 55444443332 22 3589999999999999999864
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.026 Score=58.19 Aligned_cols=111 Identities=13% Similarity=0.124 Sum_probs=73.4
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEe-ccc
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKF 465 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~-~~~ 465 (611)
.+.++.|++.+ +..+++..|.-.+.|.+ +.+.+.++.|.+.+++++++|+.. -.+..+++....+.++... +..
T Consensus 174 ~~l~~~g~~~~-~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 174 EFYSSHGLTDT-DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHHTTCCTT-CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHHcCCCCC-CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 34456676532 22344556655556654 578888888876688999988654 3455666665554333333 345
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+-.++..+++.||++|-.- .|..-+ |.++|+|+|+--
T Consensus 251 sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEEC
T ss_pred CHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEE
Confidence 5566778999999999753 366666 899999999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.023 Score=58.19 Aligned_cols=113 Identities=16% Similarity=0.178 Sum_probs=74.7
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcC-cccccCHH--HHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC----Cce
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 459 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGr-l~~~Kg~d--~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v 459 (611)
.+.+++.+|+..+ +..+++..|. ..+.|.+. .+.++++.|.+.+++++++|...+ .+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e--~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhh--HHHHHHHHHhhhhccccce
Confidence 4456677776532 2345566676 55667654 888888888767899999886542 344555554332 134
Q ss_pred EEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 460 RGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 460 ~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
... +..+-.++..+++.||++|-.. .|..-+ |.++|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 333 3345566778999999999875 355555 999999999853
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.04 Score=55.07 Aligned_cols=94 Identities=12% Similarity=0.050 Sum_probs=60.4
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
.++++.|..+...-.+.+++++.+. .. -.+|.|.+.+. .+.+++...+.+ ++.... |..+ +..+|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~-~~~l~~~~~~~~-~v~v~~-~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPN-LKKLQKFAKLHN-NIRLFI-DHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTT-HHHHHHHHHTCS-SEEEEE-SCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchH-HHHHHHHHhhCC-CEEEEe-CHHH-HHHHHHHCCEEEE
Confidence 3566778766544334445554432 23 34667888653 455555555444 465543 4333 5579999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 3 36899999999999888653
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.35 Score=54.89 Aligned_cols=231 Identities=11% Similarity=0.062 Sum_probs=119.3
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCccc--CCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV--QEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
.....|.+++.|+...+.+.+ .++.+.+ + ++.-|..- ..++.. ......+.+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~--~f~~~~~------~--i~~~G~PR~D~l~~~~----------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRS--AFWMDEE------R--ILEIGYPRNDVLVNRA----------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHH--HTCCCGG------G--EEESCCGGGHHHHHST----------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHH--HhCCCcc------e--EEEcCCCchHHHhccc----------------chHHHHHHH
Confidence 345689999999999988875 3554432 2 33344311 011111 112346678
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccc----cC-----HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEE
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQ----KG-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~----Kg-----~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (611)
+++++++. ++++|+|.-..... +| ...-++.+.+...+++.|++-. .+...+.+. + ..+.+.+..
T Consensus 529 ~~~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~-~-~~~~~~~~~ 602 (729)
T 3l7i_A 529 RTHLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD-L-SGYENFAID 602 (729)
T ss_dssp HHHTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC-C-TTCTTTEEE
T ss_pred HHHhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc-c-cccCCcEEe
Confidence 88999874 56899999776543 11 1122333333333577766643 221111110 0 112233333
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHH
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 541 (611)
...+ +.+.+++..||++|- -++-++.|++..++|||.-.. ...+... ...|+.+. +..+.--.-..|.++
T Consensus 603 ~~~~--~di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~-D~~~Y~~-~~rg~y~d-~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNY--NDVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAY-DIDKYDK-GLRGFYMN-YMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTC--SCHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECT-TTTTTTS-SCCSBSSC-TTSSSSSCEESSHHH
T ss_pred CCCC--cCHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecC-CHHHHhh-ccCCcccC-hhHhCCCCeECCHHH
Confidence 3222 235579999999983 256789999999999997631 1111111 11233220 000000001367899
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhhCCch--HHHHHHHHHHHHHH
Q 007247 542 VSTTVRRALATYGTQALAEMMKNGMAQDLSWK--GPAKKWEETLLNLE 587 (611)
Q Consensus 542 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~--~~a~~~~~~~~~l~ 587 (611)
|.++|...... ...+.+..++...+-+.++ ..+++..+.+.+..
T Consensus 673 L~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 673 LAKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcC
Confidence 99999988764 3333333333333333333 45666555544433
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.17 Score=54.01 Aligned_cols=131 Identities=11% Similarity=0.010 Sum_probs=75.3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEE-eCCCc-hhHHHHHHHHHHCCCceEEecccChHHHHHHHH--H
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--G 476 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~ 476 (611)
+..+++..|.+... ..+.+.+.+..|.+.+++++++ |.... ...+.+ ....+.++.... |-.+ . .+++ .
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~~-w~pq-~-~vL~h~~ 343 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVVP-WAPQ-A-EVLAHEA 343 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEES-CCCH-H-HHHTSTT
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEec-CCCH-H-HHhcCCc
Confidence 34566677877643 3344444444443335666554 43221 111111 111234455444 4333 2 4788 6
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCc--cCHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRA 549 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~--~d~~~la~~i~~l 549 (611)
+|++| ++ +=.++++||+++|+|.|+-...+ ....+.+. +.|..+ +. -+.++++++|+++
T Consensus 344 ~~~fv--th--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l----------~~~~~~~~~l~~~i~~l 409 (456)
T 2c1x_A 344 VGAFV--TH--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----------EGGVFTKSGLMSCFDQI 409 (456)
T ss_dssp EEEEE--EC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------GGGSCCHHHHHHHHHHH
T ss_pred CCEEE--ec--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe----------cCCCcCHHHHHHHHHHH
Confidence 66766 33 22478999999999999986532 23344455 678765 32 3689999999999
Q ss_pred HHh
Q 007247 550 LAT 552 (611)
Q Consensus 550 l~~ 552 (611)
+++
T Consensus 410 l~~ 412 (456)
T 2c1x_A 410 LSQ 412 (456)
T ss_dssp HHS
T ss_pred HCC
Confidence 987
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=94.19 E-value=0.24 Score=52.95 Aligned_cols=135 Identities=13% Similarity=0.020 Sum_probs=80.2
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
..+++..|.+... ..+.+.+.+..|.+.+.+++++-.+.. ....-+.+....++++... .|-.+ ..+++.+++.+
T Consensus 274 ~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv-~w~Pq--~~vL~h~~v~~ 348 (454)
T 3hbf_A 274 SVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIV-AWAPQ--VEILKHSSVGV 348 (454)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEE-SSCCH--HHHHHSTTEEE
T ss_pred ceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEE-eeCCH--HHHHhhcCcCe
Confidence 3456677877642 234444444444333667766543321 1111112223334556655 44333 25899999777
Q ss_pred eCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 482 IPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 482 ~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+-++ +| .+++||+++|+|.|+-...+ ....+.+. +.|..+. -..-+.++++++|++++++
T Consensus 349 fvtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 349 FLTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred EEec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 6676 44 68999999999999976533 23344453 6787651 0124689999999999976
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=93.63 E-value=0.58 Score=50.21 Aligned_cols=133 Identities=6% Similarity=-0.083 Sum_probs=77.6
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-----c-hhHHHHHHHHHHCCCceEEecccChHHHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 475 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 475 (611)
..+++..|.+.. ...+.+.+.+..|.+.+.+++++-... . .+.+.+ ....++++.... |-.+. .+++
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~~~~v~~-~~pq~--~~L~ 368 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF---TNEIADRGLIAS-WCPQD--KVLN 368 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH---HHHHTTTEEEES-CCCHH--HHHT
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH---HHhcCCCEEEEe-ecCHH--HHhc
Confidence 345666777653 233444444444444467877764321 0 011222 222345566554 43332 4897
Q ss_pred HccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----ccccee-cCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 476 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 476 ~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
.+++-++-++ +=.++++||+++|+|.|+-...+ ....+. +-+.|+.+. ..-+.++++++|++++
T Consensus 369 h~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 369 HPSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVI 437 (482)
T ss_dssp STTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHH
Confidence 7776444455 22468999999999999987543 222332 456777651 2347899999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
++
T Consensus 438 ~~ 439 (482)
T 2pq6_A 438 AG 439 (482)
T ss_dssp TS
T ss_pred cC
Confidence 87
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=93.16 E-value=0.97 Score=48.51 Aligned_cols=136 Identities=10% Similarity=-0.025 Sum_probs=77.8
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCc--------------hhHHHH-HHHHHHCCCceEEeccc
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--------------PMEKQL-EQLEILYPEKARGVAKF 465 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~--------------~~~~~l-~~l~~~~~~~v~~~~~~ 465 (611)
+..+++..|.+.. ...+.+.+.+..|.+.+.+++++-.... .....+ +.......++-.....|
T Consensus 268 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w 346 (480)
T 2vch_A 268 GSVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFW 346 (480)
T ss_dssp TCEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESC
T ss_pred CceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCc
Confidence 3456777888753 3445555555555444677766543211 010000 00111111111222224
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCC----
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVD---- 535 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~---- 535 (611)
-... .+++.+++.++-++ +| ++++||+++|+|.|+-...+ ....+ ++-+.|..+ +
T Consensus 347 ~Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l----------~~~~~ 411 (480)
T 2vch_A 347 APQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP----------RAGDD 411 (480)
T ss_dssp CCHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC----------CCCTT
T ss_pred cCHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEe----------ecccC
Confidence 3332 58999997666666 34 68999999999999976543 23333 455677754 3
Q ss_pred -ccCHHHHHHHHHHHHHh
Q 007247 536 -PVDVAAVSTTVRRALAT 552 (611)
Q Consensus 536 -~~d~~~la~~i~~ll~~ 552 (611)
.-+.++++++|++++++
T Consensus 412 ~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 412 GLVRREEVARVVKGLMEG 429 (480)
T ss_dssp SCCCHHHHHHHHHHHHTS
T ss_pred CccCHHHHHHHHHHHhcC
Confidence 24789999999999973
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=91.17 E-value=1.5 Score=44.09 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=82.8
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 403 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.+++..|.=.+.|.+ +.+.+.++.|.+.++++++.+.++. -.+..+++....++ +...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH-EEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH-HHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH-HHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 455666655556654 4888888888777899888743432 23445555554443 4444455666777899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec-CcceEEe-cccccccccCCccCHHHHHHHHHHHHHh
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~-~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
|-.- .|..=+ |.++|+|+|+--...-+..... +.....+ ++ ..| +..=+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~c--m~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GNE--LSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GGC--GGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--ccc--ccCCCHHHHHHHHHHHHHH
Confidence 9664 366666 7779999998632221111111 1111111 10 111 2445788888888887764
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=89.49 E-value=6.6 Score=41.67 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=74.8
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHHHH-HHHHHCCCceEEecccChHHHHHHHH--Hc
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLE-QLEILYPEKARGVAKFNIPLAHMIIA--GA 477 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~-~l~~~~~~~v~~~~~~~~~~~~~i~~--~a 477 (611)
..+++..|.+...-+.+.+.+++..|.+.+.+++++-... ..+.+.+. .... ++++.... |-.+. .+++ .+
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~v~~-w~pq~--~vL~h~~~ 351 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMICG-WAPQV--EVLAHKAI 351 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEES-SCCHH--HHHHSTTE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEEEEc-cCCHH--HHhCCCcc
Confidence 4566777887622233444444444433467776654332 11211121 1110 23454444 43332 4776 56
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccc-eecCcceEEec-ccccccccCC--ccCHHHHHHHHHHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRA 549 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~-~~~~~~~~v~--~~d~~~la~~i~~l 549 (611)
|++|. + +=.++++||+++|+|.|+-...+ .... +++.+.|+.+. ... -. .-+.++++++|+++
T Consensus 352 ~~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~l 422 (463)
T 2acv_A 352 GGFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDL 422 (463)
T ss_dssp EEEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHH
T ss_pred CeEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHH
Confidence 66663 3 22478999999999999986533 2333 45666777541 000 01 24789999999999
Q ss_pred HH
Q 007247 550 LA 551 (611)
Q Consensus 550 l~ 551 (611)
++
T Consensus 423 l~ 424 (463)
T 2acv_A 423 MD 424 (463)
T ss_dssp TC
T ss_pred Hh
Confidence 96
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=86.43 E-value=1 Score=43.00 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=30.3
Q ss_pred ccChHHHHHHHH-HccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc
Q 007247 464 KFNIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (611)
Q Consensus 464 ~~~~~~~~~i~~-~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 509 (611)
.|..+ +..+|+ .||++|.= +=..+++|++++|+|.|+-...
T Consensus 120 ~f~~~-m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 120 DFSTK-MQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp CSSSS-HHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred eccch-HHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 44333 556899 99999943 3357899999999998886543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 611 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-101 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 4e-38 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 5e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 314 bits (805), Expect = e-101
Identities = 161/499 (32%), Positives = 237/499 (47%), Gaps = 33/499 (6%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFT 61
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALSL 116
Query: 206 AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265
AA + P + A+DW ++ P Y++ P+ + I
Sbjct: 117 AAARIGAGVL---------PGWRPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTI 162
Query: 266 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325
HNIA+QG+F F L LPA G ++++K G+ + + TVSP
Sbjct: 163 HNIAFQGQFGANIFSKLALPAHA-------FGMEGIEYYNDVSFLKGGLQTATALSTVSP 215
Query: 326 HYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383
YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A + +
Sbjct: 216 SYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA-ANLKNR 273
Query: 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 443
L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 274 ALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA 332
Query: 444 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 503
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P
Sbjct: 333 LEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIP 392
Query: 504 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMM 562
+VA TGGL DTV + + PV + + +RR + Y L +M
Sbjct: 393 VVARTGGLADTVIDANHAALASK-AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQ 451
Query: 563 KNGMAQDLSWKGPAKKWEE 581
K GM D+SW+ A +
Sbjct: 452 KLGMKSDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 144 bits (362), Expect = 4e-38
Identities = 103/502 (20%), Positives = 181/502 (36%), Gaps = 86/502 (17%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
+L +G E P K GGL + L + ALA+ GH V+ P + +++ + +V
Sbjct: 2 KVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKI----RV 56
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
+ +V+ + + + + ++ +YGP + + +
Sbjct: 57 FGEEVQVKVSYEERGNLRIYRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGR 105
Query: 206 AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265
A++ L DVV +DWHT +K +K VF I
Sbjct: 106 ASVLLLNDLLREEPLP-------DVVH-FHDWHTVFAGALIKKYFKI-------PAVFTI 150
Query: 266 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325
H + AF + G ++ I+ G +D+V TVS
Sbjct: 151 HRLNKSKLPAF---------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSR 195
Query: 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385
Y + + I + NG+D WN S + ++
Sbjct: 196 GYLIDEWG--------FFRNFEGKITYVFNGIDCSFWNE------------SYLTGSRDE 235
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL----AAAIPHFIKENVQIIVLGTGK 441
K++L ++ G+ IG R QKG D+L + ++ I++G G
Sbjct: 236 RKKSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD 293
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501
+E LE + + + DF++IPS FEP GL+ L AM G
Sbjct: 294 PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA 353
Query: 502 VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561
+PI ++ GGL D + TG V D ++ + +AL L++
Sbjct: 354 IPIASAVGGLRDIITNE-TGI----------LVKAGDPGELANAILKALELS-RSDLSKF 401
Query: 562 MKNG--MAQDLSWKGPAKKWEE 581
+N A SW+ A+++ +
Sbjct: 402 RENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 56.4 bits (135), Expect = 5e-09
Identities = 46/385 (11%), Positives = 104/385 (27%), Gaps = 86/385 (22%)
Query: 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 287
+D++++ D+H L+ + ++ F +H
Sbjct: 123 DDIIWIH-DYHLLPFAHELRKRGV------NNRIGFFLHI-------------------P 156
Query: 288 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 347
F + F P + + + + D++ + + + + K
Sbjct: 157 FPTPEIFN---ALPTY----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK 209
Query: 348 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
+ G + IG++ A PL + Q + +N+ I
Sbjct: 210 SHT---AWGKAFRTEVY----PIGIEPKEIAKQAAGPLPPKLAQLK---AELKNVQNIFS 259
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPMEKQLEQLEILYPEKARGVAK 464
+ RL+ KG A +++ Q I ++ + + + +
Sbjct: 260 VERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGR 319
Query: 465 FN-------------------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT---- 501
N L I +D L+ + L+ +
Sbjct: 320 INGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANP 379
Query: 502 -VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560
V +++ G + + V+P D V+ + RAL T
Sbjct: 380 GVLVLSQFAGAANELTSALI-------------VNPYDRDEVAAALDRAL-TMSLAERIS 425
Query: 561 MMKNGMAQDLSWKGPAKKWEETLLN 585
+ K W+E ++
Sbjct: 426 RHAEMLDV--IVKNDINHWQECFIS 448
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 52.5 bits (124), Expect = 2e-08
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE-Q 414
G+D WN S + ++ K++L ++ G+ FIGR + Q
Sbjct: 1 GIDCSFWNE------------SYLTGSRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQ 45
Query: 415 KGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470
KG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFV 105
Query: 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 530
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D +
Sbjct: 106 RELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET----------- 154
Query: 531 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 572
V D ++ + +AL L++ +N + +S+
Sbjct: 155 GILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 611 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.87 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.48 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.21 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.19 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.85 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.8 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.8 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.44 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.43 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.04 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.54 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.52 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.42 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.29 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 93.18 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 81.89 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.7e-59 Score=512.80 Aligned_cols=464 Identities=34% Similarity=0.557 Sum_probs=385.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++|++||+|+.++||+|+++.+|+++|+++||+|+||+|.|+...+.+......--........++.++....|+++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 99999999999987899999999999999999999999999999876665544332221222233456777888899999
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+++++|.++.+. ..+|.+..+.+|.++..++..+++++.++.+.+.. .++|| |||+|+|++++.+.
T Consensus 81 ~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~pD-IvH~h~~~~~l~~~ 146 (477)
T d1rzua_ 81 LILDAPAYYERS-----GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP--------GWRPD-MVHAHDWQAAMTPV 146 (477)
T ss_dssp EEEECHHHHCSS-----SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSS--------SCCCS-EEEEEHHHHTTHHH
T ss_pred EEecChhhcccC-----CCcccCcccccccccHHHHHHHHHHHHhhhhhccc--------CCCCC-EEEecchhHHHHHH
Confidence 999999887763 35777778888999999999999998887766432 24799 99999999999998
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
+++.... .++|+|+|+|+..+...++...+..++.+...+.. .+ .......++++..+..+|.++++|
T Consensus 147 ~~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~ad~~~~vs 214 (477)
T d1rzua_ 147 YMRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EG---IEYYNDVSFLKGGLQTATALSTVS 214 (477)
T ss_dssp HHHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TT---TEETTEEEHHHHHHHHCSEEEESC
T ss_pred HHHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhccc----cc---ccccchhHHHHHHHHhhhhhhhcc
Confidence 8876542 58999999999999888888888777776655331 00 111234567888899999999999
Q ss_pred HHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 325 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+.+++++.. ..+|...+.+. +..++.+|+||+|.+.|+|...++++.+++.... ..+...+..++...+++. ++.
T Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~ 291 (477)
T d1rzua_ 215 PSYAEEILT-AEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD-DGS 291 (477)
T ss_dssp HHHHHHTTS-HHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC-SSS
T ss_pred HHHHHHHHH-HhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhH-HHhhhhHHHHHHhccccc-CCc
Confidence 999988764 12233333222 2358999999999999999998888887766654 444556777888888864 467
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
++|+|+||+.++||++.|++|++++.+.+.+++++|.|+......++++...+++++.+.+.++.+....++++||++++
T Consensus 292 ~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~ 371 (477)
T d1rzua_ 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (477)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred cEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccC
Confidence 89999999999999999999999998889999999999987888888888888999999999999999899999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCc---------ceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~---------~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
||++|+||++++|||+||+|||+|++||++|+|.|+. +|++| ++.|+++|+++|.++++.+
T Consensus 372 PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~~ 441 (477)
T d1rzua_ 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441 (477)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHHH
T ss_pred CccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEe----------CCCCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999998875 89987 9999999999999998854
Q ss_pred -CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 554 -GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 554 -~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+++.+.+|++++++++|||+.++++|+++|++++
T Consensus 442 ~~~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~~ll 476 (477)
T d1rzua_ 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476 (477)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 3688999999999999999999999999999986
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=9.7e-46 Score=396.04 Aligned_cols=424 Identities=24% Similarity=0.337 Sum_probs=310.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
||||+|+.+|+|. ++||+++++..|+++|+++||+|+|+||.|+..... ....+.................++.+
T Consensus 1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (437)
T d2bisa1 1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYEERGNLRI 75 (437)
T ss_dssp CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCE----EEEEEECSSSEEEEEEEEEEETTEEE
T ss_pred CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchh----hccceeecccccceeeeeeccCCeEE
Confidence 9999999999995 679999999999999999999999999987654432 22233333333444555566678888
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+++..+.+... ..|.+ .+.....++..+++.....+..+... ...|| |||+|+|.+++++.
T Consensus 76 ~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pD-iIh~~~~~~~~~~~ 136 (437)
T d2bisa1 76 YRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE-------EPLPD-VVHFHDWHTVFAGA 136 (437)
T ss_dssp EEEESSGGGCS-------CTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTS-------SCCCS-EEEEETGGGHHHHH
T ss_pred EecCccccccc-------ccccc----chhhHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECChhhhhHhh
Confidence 88876543321 22211 02222333445556555555544321 12589 99999999988887
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
++++. .++|+++++|+..+.. ++...+...+.+. .........++.....+|.+++++
T Consensus 137 ~~~~~-------~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~v~~~~ 194 (437)
T d2bisa1 137 LIKKY-------FKIPAVFTIHRLNKSK-LPAFYFHEAGLSE--------------LAPYPDIDPEHTGGYIADIVTTVS 194 (437)
T ss_dssp HHHHH-------HCCCEEEEESSCCCCC-EEHHHHHHTTCGG--------------GCCSSEECHHHHHHHHSSEEEESC
T ss_pred hhhcc-------ccCceeEEEeeccccc-cchhhhhhccchh--------------hhhHHHHHHHHHHHHhhhhhcccc
Confidence 87776 4899999999866522 2111111111111 111233456677788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..+.+.... ++.. ..++.+|+||+|.+.|.|...+ ..+...+..+.+++++. +.++
T Consensus 195 ~~~~~~~~~~--~~~~------~~ki~vi~~g~d~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~~ 251 (437)
T d2bisa1 195 RGYLIDEWGF--FRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVT 251 (437)
T ss_dssp HHHHHHTHHH--HGGG------TTTEEECCCCCCTTTSCGGGCC------------SCHHHHHHHHHHHTTCC---SCEE
T ss_pred hhhhhhhhhh--hccc------cCceEEEecccccccccccccc------------hhhHHHHHhhhhhhhcc---CCce
Confidence 9988765431 1111 2389999999999888664321 22344566778888875 4579
Q ss_pred EEEEcCcc-cccCHHHHHHHHHhccc----CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 405 IGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 405 il~iGrl~-~~Kg~d~li~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
|+|+||+. ++||++.+++|+..+.. ++++|+|+|.|+......++.+....++.+...+..+.+.+..+++.||+
T Consensus 252 i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi 331 (437)
T d2bisa1 252 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 331 (437)
T ss_dssp EEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSE
T ss_pred EEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhcc
Confidence 99999996 47999999999998753 58999999999887888888888777765665556688888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||..|++|++++|||+||+|||+++.||..|++++ ++|+++ ++.|+++++++|.+++++. ++.+.
T Consensus 332 ~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~----------~~~d~~~la~~i~~ll~~~-~~~~~ 399 (437)
T d2bisa1 332 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDLS 399 (437)
T ss_dssp EEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHTTT-TSCTH
T ss_pred ccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEE----------CCCCHHHHHHHHHHHHhCC-HHHHH
Confidence 99999999999999999999999999999999999876 589987 9999999999999999742 34555
Q ss_pred HHHHHHH--HhhCCchHHHHHHHHHHHHHHHc
Q 007247 560 EMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 560 ~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+|++++. .++|||+.++++|+++|+++++.
T Consensus 400 ~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r 431 (437)
T d2bisa1 400 KFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 431 (437)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 5555553 46899999999999999988753
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.9e-36 Score=309.47 Aligned_cols=228 Identities=14% Similarity=0.181 Sum_probs=181.5
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
.++.+++.++...+.+.+. ++.+.+ ++.+|+||+|.+.+.+... +..++.++..+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~--~~~~~~------~i~vi~~gv~~~~~~~~~~----------------~~~~~~~r~~~~ 190 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNG 190 (370)
T ss_dssp CCCEEEESCHHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTT
T ss_pred cCceEEEecHHHHHHHHHh--cCCCcc------eEEEEEeecccccccccCc----------------hhhhhhhhhccC
Confidence 5789999999988887752 444433 8999999999876644321 223667888899
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAH 471 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~ 471 (611)
++. +.++++++||+.++||++.+++|++++.+ ++..++++|+++. .+.++++..++ .+++.+.+.. +.+.
T Consensus 191 ~~~--~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~--~~~~~~~~~~~~~~~~v~~~g~~--~~~~ 264 (370)
T d2iw1a1 191 IKE--QQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEALAEKLGVRSNVHFFSGR--NDVS 264 (370)
T ss_dssp CCT--TCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHHHHHHHTCGGGEEEESCC--SCHH
T ss_pred CCc--cceEEEEEeccccccchhhhcccccccccccccceeeecccccc--ccccccccccccccccccccccc--cccc
Confidence 874 55899999999999999999999999976 4666766665542 23344444443 2457666543 3366
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.||++++||..|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.++++
T Consensus 265 ~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~---------~~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 265 ELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKALT 335 (370)
T ss_dssp HHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE---------CSSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEE---------cCCCCHHHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999865 378999999999999999
Q ss_pred hcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
| ++.+.+|++++. .+.|+|..+.+++.++|+
T Consensus 336 d--~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 336 Q--SPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp C--HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 8 888888888774 577888888888888875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=5.3e-26 Score=216.80 Aligned_cols=189 Identities=28% Similarity=0.453 Sum_probs=158.1
Q ss_pred CcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhccc----C
Q 007247 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK----E 430 (611)
Q Consensus 356 gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~li~a~~~l~~----~ 430 (611)
|+|++.|.|.... ..+...+..+++++|++ +.++|+|+||+. ++||++.+++|++.+.+ +
T Consensus 1 gid~~~~~~~~~~------------~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~ 65 (196)
T d2bfwa1 1 GIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 65 (196)
T ss_dssp CCCTTTSSGGGSC------------SCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred CcChhhcCCCCCC------------chhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC
Confidence 7888888765321 23345577889999997 567899999997 58999999999999854 5
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
+++|+|+|+|++.++..++.+...+++.....+..+.+.+..+|+.||++++||+.|+||++++|||+||+|||+++.|+
T Consensus 66 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 66 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred CeEEEEEeecccchhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 89999999998878888888888887656566666788888999999999999999999999999999999999999999
Q ss_pred cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCC
Q 007247 511 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 571 (611)
Q Consensus 511 ~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs 571 (611)
+.|++.+ .+|+++ +++|+++++++|.+++.. .++.+.+++++++ +.+||
T Consensus 146 ~~e~i~~-~~g~~~----------~~~~~~~l~~~i~~~l~~-~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-ETGILV----------KAGDPGELANAILKALEL-SRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-CceeeE----------CCCCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCC
Confidence 9998865 589987 999999999999999984 2667777777765 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.4e-23 Score=223.53 Aligned_cols=293 Identities=14% Similarity=0.108 Sum_probs=207.7
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCccc-ccccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
-| +|+.|||+..++|.+++... +++++++++|...+ ... +..+ ..
T Consensus 123 ~d-~iwvhDyhl~llp~~lR~~~------~~~~i~~flH~pfP-----~~~~fr~l----------------------p~ 168 (456)
T d1uqta_ 123 DD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFP-----TPEIFNAL----------------------PT 168 (456)
T ss_dssp TC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCC-----CHHHHTTS----------------------TT
T ss_pred CC-eEEEeccchhhhHHHHHHhC------CCCcEEEEeCCCCC-----ChHHhccC----------------------cc
Confidence 37 99999999999999999875 78999999995332 110 1100 01
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCc--CCCcccc--hh----hhccceeEeeCCcccCCcCCCCccccccccCcch
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD--NI----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~--~~----~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 378 (611)
...+..++..+|.|.+.+..+++.+.... ..+.... .. -+..++.++|+|+|+..|.+....
T Consensus 169 ~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~---------- 238 (456)
T d1uqta_ 169 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 238 (456)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred hHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhccc----------
Confidence 23455677899999999999887765311 0111100 00 022478889999998776432110
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCCc-------hhH
Q 007247 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKK-------PME 445 (611)
Q Consensus 379 ~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~~-------~~~ 445 (611)
.......+++.+.+ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|.+.. ++.
T Consensus 239 ---~~~~~~~~l~~~~~-----~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~ 310 (456)
T d1uqta_ 239 ---PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 310 (456)
T ss_dssp ---CCCHHHHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred ---HHHHHHHHHHHhcC-----CCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHH
Confidence 01112334555543 56899999999999999999999999865 2 577888887641 223
Q ss_pred HHHHHHHHH----C-----CCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc-----eEEcCCccc
Q 007247 446 KQLEQLEIL----Y-----PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-----PIVASTGGL 511 (611)
Q Consensus 446 ~~l~~l~~~----~-----~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P-----vI~s~~gg~ 511 (611)
..+.++... + ...+......+.+.+..+++.||++++||..||||++++|||+||+| +|+|+.+|.
T Consensus 311 ~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~ 390 (456)
T d1uqta_ 311 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 390 (456)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCC
Confidence 333333322 1 12344555667788889999999999999999999999999999999 899999999
Q ss_pred ccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 512 ~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
.+.+.+ |+++ +|.|++++|++|.++|+++ ++++.++.++.+ ...||+...++.+++-++++
T Consensus 391 ~~~l~~---g~lV----------nP~d~~~~A~ai~~aL~~~-~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 391 ANELTS---ALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp GGTCTT---SEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhCC---eEEE----------CcCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 999964 7776 9999999999999999873 445555544443 46799998888888777664
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=7.4e-22 Score=182.65 Aligned_cols=137 Identities=15% Similarity=0.229 Sum_probs=122.2
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
.++|+||+.++||++.+++|++++ ++.+++|+|.+. +..++..+++.....+++.+.+..+.+.+..+++.||+++
T Consensus 14 ~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 91 (166)
T d2f9fa1 14 FWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLL 91 (166)
T ss_dssp CEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred EEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeecccccccccccccccccc
Confidence 478999999999999999999998 578899999865 3455556666665667899998889999999999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
+||+.|+||++++|||++|+|||+++.++..|++.++.+|+++ + .|+++++++|.++++++
T Consensus 92 ~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~----------~-~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 92 CTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV----------N-ADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp ECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE----------C-SCHHHHHHHHHHHHHCT
T ss_pred cccccccccccccccccccccceeecCCcceeeecCCcccccC----------C-CCHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999999999999999999975 4 58999999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=8.8e-12 Score=137.84 Aligned_cols=294 Identities=15% Similarity=0.156 Sum_probs=188.1
Q ss_pred CCeEEEecCCccchHHHHH-HHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCccc---------
Q 007247 228 EDVVFVANDWHTSLIPCYL-KTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF--------- 288 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l-~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~--------- 288 (611)
++ ++|.||-|++++.+-+ +.....+|+ .....++||.|...+.| +|+.+.+..+- |+.+
T Consensus 300 ~~-vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l-~~~~~~i~~i~~~ 377 (796)
T d1l5wa_ 300 YE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLL-PRHMQIINEINTR 377 (796)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHC-HHHHHHHHHHHHH
T ss_pred hh-hhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHHh-HHHHHHHhHhhHH
Confidence 67 9999999987765543 332222221 12467899999987655 35544432211 1000
Q ss_pred -ccccc--cccC-----CCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccC
Q 007247 289 -KSSFD--FIDG-----YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360 (611)
Q Consensus 289 -~~~~~--~~~~-----~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~ 360 (611)
..... +... .........+++-..++..|..+..||+-..+.+.+.. +. ... -+-+.++.-|.|||+..
T Consensus 378 fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~-~~-~~~-~~~p~~i~~ITNGVh~~ 454 (796)
T d1l5wa_ 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL-FP-EYH-QLWPNKFHNVTNGITPR 454 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT-SH-HHH-HHCGGGEEECCCCBCHH
T ss_pred HHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHh-hh-hcc-ccCCcccccccccccHH
Confidence 00000 0000 00000113456667788899999999999988766521 10 000 11234899999999998
Q ss_pred CcCCCCcc--------ccccc-------------cCcc-----hhhhc----cHHHHHHHHHHhCCCCCCCCcEEEEEcC
Q 007247 361 EWNPLTDK--------YIGVK-------------YDAS-----TVMDA----KPLLKEALQAEVGLPVDRNIPVIGFIGR 410 (611)
Q Consensus 361 ~~~p~~~~--------~~~~~-------------~~~~-----~~~~~----~~~~~~~~~~~~gl~~~~~~~~il~iGr 410 (611)
.|-....+ ++... +... .+.+. |....+.++++.|...+++..+++|+-|
T Consensus 455 ~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRR 534 (796)
T d1l5wa_ 455 RWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKR 534 (796)
T ss_dssp HHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESC
T ss_pred HHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhh
Confidence 88432211 11100 0000 11122 2223344566788888889999999999
Q ss_pred cccccCHHHHHHHHH----hccc------CCcEEEEEeCCCc------hhHHHHHHHHH---HCC-----CceEEecccC
Q 007247 411 LEEQKGSDILAAAIP----HFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP-----EKARGVAKFN 466 (611)
Q Consensus 411 l~~~Kg~d~li~a~~----~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~-----~~v~~~~~~~ 466 (611)
+.++|..++++.-+. .|++ .+++|+++|...+ ++.+.+.++.. ..| .++.++..++
T Consensus 535 fa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYd 614 (796)
T d1l5wa_ 535 LHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYC 614 (796)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCC
T ss_pred hhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCc
Confidence 999999998554433 3332 2699999999753 23333444333 222 1688889999
Q ss_pred hHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEecc
Q 007247 467 IPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGS 526 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~ 526 (611)
..++..++.+||+.+..|+. |.+|..-+-||..|.+.+++-.|...|+.++ ++|||.||.
T Consensus 615 v~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 615 VSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp HHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred hHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 99999999999999999875 9999999999999999999999999998875 789999984
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.21 E-value=3.8e-10 Score=124.62 Aligned_cols=291 Identities=18% Similarity=0.172 Sum_probs=190.3
Q ss_pred CCeEEEecCCccchHHHH-HHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCc----------c
Q 007247 228 EDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------Q 287 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~-l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~----------~ 287 (611)
++ ++|.||-|++++.+- ++......|+ .....++||.|...+.+ +|+.+.+..+- |+ .
T Consensus 321 ~~-vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~l-pr~~~ii~ei~~~ 398 (824)
T d2gj4a1 321 KV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLL-PRHLQIIYEINQR 398 (824)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHC-HHHHHHHHHHHHH
T ss_pred cc-eeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHHh-HHHhhhhhhhHHH
Confidence 45 899999988776554 4433322222 12346899999987655 45554443210 10 0
Q ss_pred cc--------------cccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEe
Q 007247 288 FK--------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353 (611)
Q Consensus 288 ~~--------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI 353 (611)
|. ..+..++.. ....+++-..++..|..+-.||.-..+.+++...+ + -.-+.+.++.-|
T Consensus 399 fl~~~~~~~~~d~~~~~~l~ii~e~----~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~--~-~~~~~p~ki~~i 471 (824)
T d2gj4a1 399 FLNRVAAAFPGDVDRLRRMSLVEEG----AVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK--D-FYELEPHKFQNK 471 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECS----SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH--H-HHHHCGGGEEEC
T ss_pred HHHHHHHHCCCcHHHHhhccccccc----CCceeeHHHHHHHhchhHHHHHHHHHHHHHHhhcc--c-cccCCCcceecc
Confidence 00 000001000 11345677778899999999999998887752211 0 011223489999
Q ss_pred eCCcccCCcCCCCcccccc---------------------ccC-cc----hhhhccHH----HHHHHHHHhCCCCCCCCc
Q 007247 354 VNGMDVQEWNPLTDKYIGV---------------------KYD-AS----TVMDAKPL----LKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 354 ~Ngvd~~~~~p~~~~~~~~---------------------~~~-~~----~~~~~~~~----~~~~~~~~~gl~~~~~~~ 403 (611)
.|||+...|-....+.+.. ++- .. .+...|.. ..+.++++.|+..+++..
T Consensus 472 TNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~l 551 (824)
T d2gj4a1 472 TNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551 (824)
T ss_dssp CCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSE
T ss_pred cCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchh
Confidence 9999999985432221111 010 00 12222332 334466778888889999
Q ss_pred EEEEEcCcccccCHHHHH----HHHHhccc------CCcEEEEEeCCCc------hhHHHHHHHHH---HCC-----Cce
Q 007247 404 VIGFIGRLEEQKGSDILA----AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP-----EKA 459 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li----~a~~~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~-----~~v 459 (611)
+++++-|+.++|...+.+ ..+.++++ .++++++.|...+ .+.+.+.+++. ..| .+|
T Consensus 552 fd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkV 631 (824)
T d2gj4a1 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRV 631 (824)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEE
T ss_pred hhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeE
Confidence 999999999999998833 23344433 3789999999653 23344444433 122 168
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEeccc
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 527 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~ 527 (611)
.++..++..++..++.+||+.+..|+. |.+|..-+-+|..|.+.+++-.|...|+.++ +.|||.||..
T Consensus 632 vFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~ 703 (824)
T d2gj4a1 632 IFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp EEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred EEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCC
Confidence 899999999999999999999999975 9999999999999999999999999998875 7899999844
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.85 E-value=4.3e-08 Score=99.94 Aligned_cols=81 Identities=22% Similarity=0.165 Sum_probs=60.1
Q ss_pred CCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc--------cccceecCcceEEecc
Q 007247 455 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGS 526 (611)
Q Consensus 455 ~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~ 526 (611)
.+.++......+.. .++..+|++|..+- ..+++|||++|+|+|+....+ ..+.+.+.+.|..+
T Consensus 268 ~~~~v~i~~~~p~~---~ll~~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l-- 338 (391)
T d1pn3a_ 268 DGADCFVVGEVNLQ---ELFGRVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV-- 338 (391)
T ss_dssp CCTTCCEESSCCHH---HHHTTSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE--
T ss_pred CCCCEEEecccCHH---HHHhhccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc--
Confidence 34567666655532 47899999997654 478999999999999976543 24566677788876
Q ss_pred cccccccCCcc--CHHHHHHHHHHHHHh
Q 007247 527 FSVDCEAVDPV--DVAAVSTTVRRALAT 552 (611)
Q Consensus 527 ~~~~~~~v~~~--d~~~la~~i~~ll~~ 552 (611)
+.. ++++++++|++++++
T Consensus 339 --------~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 339 --------DGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp --------CCSSCCHHHHHHHHHHHTST
T ss_pred --------CcCCCCHHHHHHHHHHHhCH
Confidence 443 489999999999964
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.80 E-value=8.6e-08 Score=97.96 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=78.5
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
.++++.|........+.+-.++..+...+..++++..... ......++++.....++.. .++..+|++|.
T Consensus 239 ~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~p~~---~ll~~~~~~I~ 308 (401)
T d1rrva_ 239 PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE-------LVLPDDRDDCFAIDEVNFQ---ALFRRVAAVIH 308 (401)
T ss_dssp CEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT-------CCCSCCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred eEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEeccccc-------cccccCCCCEEEEeccCcH---HHhhhccEEEe
Confidence 4566677665543333333333333332333334333221 0112345677766655532 47889999994
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHH
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 551 (611)
.+-..++.||+++|+|+|+....+ ..+.+++.+.|..+ +.. ++++|+++|+++++
T Consensus 309 ----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l----------~~~~~~~~~L~~ai~~vl~ 369 (401)
T d1rrva_ 309 ----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH----------DGPTPTFESLSAALTTVLA 369 (401)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC----------SSSCCCHHHHHHHHHHHTS
T ss_pred ----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhC
Confidence 455689999999999999987655 45566666788875 444 58999999999995
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=3.5e-07 Score=91.77 Aligned_cols=161 Identities=11% Similarity=0.020 Sum_probs=87.7
Q ss_pred cEEEEE-cCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 403 PVIGFI-GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 403 ~~il~i-Grl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
..++.+ |......-.+.+.+.+..+.. ....++++............. .....++... .|..+ ...+|+.||+++
T Consensus 178 ~~i~~~~gs~g~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~v~-~f~~~-~~~lm~~adl~I 253 (351)
T d1f0ka_ 178 VRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYA-EAGQPQHKVT-EFIDD-MAAAYAWADVVV 253 (351)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTCHHHHHHHHH-HTTCTTSEEE-SCCSC-HHHHHHHCSEEE
T ss_pred cccccccccchhhhhHHHHHHhhhhhcc-cceeeeeccccchhhhhhhhc-ccccccceee-eehhh-HHHHHHhCchhh
Confidence 444444 444333333555556666533 333444444433233333333 3333334333 34433 457899999998
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCc---c----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHh
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTG---G----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~g---g----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 552 (611)
.- +=+.++.||+++|+|+|+.... + .++.+++.+.|+.+ +.. +.+.+.++|..+
T Consensus 254 t~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~----------~~~~~~~e~l~~~l~~l--- 316 (351)
T d1f0ka_ 254 CR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII----------EQPQLSVDAVANTLAGW--- 316 (351)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHTC---
T ss_pred cc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe----------chhhCCHHHHHHHHHhh---
Confidence 43 2348899999999999986432 2 23455566678765 433 356776666654
Q ss_pred cCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.++.+.+|++++.. +.-...+++..+.++++.
T Consensus 317 -~~~~~~~~~~~~~~--~~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 317 -SRETLLTMAERARA--ASIPDATERVANEVSRVA 348 (351)
T ss_dssp -CHHHHHHHHHHHHH--TCCTTHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHc--cCCccHHHHHHHHHHHHH
Confidence 25667778777653 232234555555555543
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.44 E-value=4.8e-05 Score=77.34 Aligned_cols=226 Identities=14% Similarity=0.044 Sum_probs=145.5
Q ss_pred HhHHHhh-hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHH
Q 007247 309 WMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 309 ~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
..|.++. -||..++.++..++.+.+ .|.+.. +|.++-+. +|.- ...
T Consensus 135 ~~R~~iskls~~hf~~t~~~~~~L~~---~Ge~~~------~I~~vG~p~~D~i-----------------------~~~ 182 (373)
T d1v4va_ 135 ANRRLTDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAV-----------------------LLA 182 (373)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHH-----------------------HHH
T ss_pred hhhhhhccccceeeecchhhhhhhhh---hccccc------ceeecccchhhHH-----------------------Hhh
Confidence 3344443 689999999999999997 677655 66555432 1110 000
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
....+.....+ .+.+.++.+-|-+..+....+++++..+.+ .++.+++...........+.+..... .++..+..
T Consensus 183 ~~~~~~~~~~~--~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~~~ 259 (373)
T d1v4va_ 183 AKLGRLPEGLP--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDP 259 (373)
T ss_dssp HHHCCCCTTCC--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECC
T ss_pred hhhcccccccc--cccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceeecc
Confidence 00000011112 244667778887777777888888877765 57777776555443444444433333 45777777
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccCHHHHH
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 543 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 543 (611)
+.....-.+++.|++++--| |-.+.||..+|+|+|.-. .|.-.+.++.|.+ .+ ...|.+++.
T Consensus 260 l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vl-----------v~~d~~~I~ 322 (373)
T d1v4va_ 260 LEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KL-----------AGTDPEGVY 322 (373)
T ss_dssp CCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EE-----------CCSCHHHHH
T ss_pred chHHHHHHHhhhceeEeccc-----chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EE-----------cCCCHHHHH
Confidence 77777777899999998544 678899999999999984 4666666665544 33 456899999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007247 544 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 544 ~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
+++..++.+ +..+..+... ..-|---..+++..+.+.+-+...
T Consensus 323 ~~i~~~l~~--~~~~~~~~~~--~npYGdG~as~rI~~~L~~~~~~~ 365 (373)
T d1v4va_ 323 RVVKGLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLGLG 365 (373)
T ss_dssp HHHHHHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHcC--HHHHhhcccC--CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999987 5444433221 233544457778888777766433
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.43 E-value=3.6e-06 Score=85.13 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=76.6
Q ss_pred cEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 403 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 403 ~~il~iGrl~-~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.++++.|... ..+..+.+++++..+ +..++++ |.... .....++++......+. ..++..+|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~--------~~~~~~~nv~~~~~~p~---~~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADL--------VLPDDGADCFAIGEVNH---QVLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTC--------CCSSCGGGEEECSSCCH---HHHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCcc--------ccccCCCCEEEEeccCH---HHHHhhcCEE
Confidence 3444444443 345556666666665 3333333 33221 11123456766655543 2578999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHh
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 552 (611)
| ..+-..++.||+++|+|+|+....+ ..+.+.+.+.|..+ +.. ++++++++|.+++++
T Consensus 306 V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l----------~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 306 I----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp E----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHHTSH
T ss_pred E----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 9 3466789999999999999975443 44556666778875 433 699999999999964
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=0.001 Score=67.18 Aligned_cols=231 Identities=16% Similarity=0.059 Sum_probs=133.1
Q ss_pred hHHHh-hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCc-CCCCccccccccCcchhhhccHHH
Q 007247 310 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEW-NPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 310 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~-~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
.|.++ +-||..++.++.+++.+.+ .|.+.. +|.++-|. +|.-.. .+... ..+...
T Consensus 134 ~R~~iskls~~hf~~~~~~~~~L~~---~G~~~~------~I~~vG~~~~D~l~~~~~~~~-------------~~~~~~ 191 (376)
T d1f6da_ 134 NRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQVM-------------SSDKLR 191 (376)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHTT-------------TCHHHH
T ss_pred hhhhhccceeEEEeccHHHHhHHHh---cCCCcc------ccceecCchHHHHHHHHhhhh-------------ccchhh
Confidence 34444 4689999999999999987 777655 77776652 331100 00000 000011
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEec
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 463 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 463 (611)
+..+.....+.. ...++++..=|.+ ..+....++.++..+.+ .++.+++--................ ..++..+.
T Consensus 192 ~~~~~~~~~~~~-~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~~~~ 269 (376)
T d1f6da_ 192 SELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVILID 269 (376)
T ss_dssp HHHHTTCTTCCT-TSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred hhhhccccccCC-CCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccceeec
Confidence 111111112222 1234444444544 34456677777776654 4666666554433333344343333 34687777
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHH
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 542 (611)
.+.....-.+++.|++++--| |-.+.||-.+|+|+|.-.. ..-.+.+..+ +-++ ...|.+++
T Consensus 270 ~l~~~~fl~ll~~a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~-----------v~~~~~~I 332 (376)
T d1f6da_ 270 PQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRL-----------VGTDKQRI 332 (376)
T ss_dssp CCCHHHHHHHHHHCSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEE-----------CCSSHHHH
T ss_pred cccHHHHHHHHhhceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceecC-eeEE-----------CCCCHHHH
Confidence 777777777999999999554 5778899999999997643 2344555444 4444 34589999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 543 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 543 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
.+++.+++++ +.....+.+ ....|---+.+++..+++++
T Consensus 333 ~~ai~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 333 VEEVTRLLKD--ENEYQAMSR--AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHHHHHC--HHHHHHHHH--SCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhC--hHhhhhhcc--CCCCCCCChHHHHHHHHHHh
Confidence 9999999986 332222111 11235334667777777764
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.54 E-value=0.011 Score=59.39 Aligned_cols=226 Identities=15% Similarity=0.086 Sum_probs=120.1
Q ss_pred HhHHHh-hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccHHH
Q 007247 309 WMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 309 ~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
..|.++ +-||..++.++..++.+.+ .|.+.. +|.++-|. +|.-........
T Consensus 135 ~~R~~iskls~~hf~~t~~~~~~L~~---~G~~~~------~I~~vG~~~~D~i~~~~~~~~------------------ 187 (377)
T d1o6ca_ 135 LNRQMTGAIADLHFAPTGQAKDNLLK---ENKKAD------SIFVTGNTAIDALNTTVRDGY------------------ 187 (377)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------
T ss_pred hhccccccceeEEeecchhhhhhhhh---hccccc------eEeeccchhHHHHHHHHHHHH------------------
Confidence 344444 4699999999999999997 676655 67766653 332100000000
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCccccc-CHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEec
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQK-GSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 463 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~K-g~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 463 (611)
....... ...+.++++.+-|.+..+ .....+.++..+.. .++.+++...........+..... ...++..+.
T Consensus 188 ---~~~~~~~-~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ni~~~~ 262 (377)
T d1o6ca_ 188 ---SHPVLDQ-VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFG-DSDRVHLIE 262 (377)
T ss_dssp ---CCSTTTT-TTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEECC
T ss_pred ---hhhhhhh-ccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccc-cccceEecc
Confidence 0000000 112345566666655432 22333333333322 466665554433323333332222 334688777
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHH
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 542 (611)
.+.....-.+++.|++++--| |-.+.||-.+|+|+|.-.. +.-.+.++.|. -+++ ..|.+++
T Consensus 263 ~l~~~~fl~llk~s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~-nilv-----------~~~~~~I 325 (377)
T d1o6ca_ 263 PLEVIDFHNFAAKSHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGT-LKLA-----------GTDEENI 325 (377)
T ss_dssp CCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTS-SEEE-----------CSCHHHH
T ss_pred ccchHHHHHHHhhhheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhcCe-eEEC-----------CCCHHHH
Confidence 778777778999999988433 4568899999999998754 33555655553 3443 4588999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 543 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 543 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.+++..++.+ ...+..+.. ....|---..+++..+++.+-.
T Consensus 326 ~~~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 326 YQLAKQLLTD--PDEYKKMSQ--ASNPYGDGEASRRIVEELLFHY 366 (377)
T ss_dssp HHHHHHHHHC--HHHHHHHHH--CCCTTCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC--hHHHhhhcc--CCCCCCCChHHHHHHHHHHHhh
Confidence 9999999987 444433321 1123444456777777665433
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.52 E-value=0.0029 Score=64.37 Aligned_cols=129 Identities=12% Similarity=-0.044 Sum_probs=75.2
Q ss_pred cEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH--HHcc
Q 007247 403 PVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGAD 478 (611)
Q Consensus 403 ~~il~iGrl~~~K--g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aD 478 (611)
.+.+..|.+.... -...++++++++ +.++++...+... ...-+......+.++.....++... ++ ..++
T Consensus 267 ~v~~s~gs~~~~~~~~~~~~~~~~~~~---~~~vl~~~~~~~~-~~l~~~~~~~~~~nv~~~~~~pq~~---lL~hp~~~ 339 (450)
T d2c1xa1 267 VVYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKAR-VHLPEGFLEKTRGYGMVVPWAPQAE---VLAHEAVG 339 (450)
T ss_dssp EEEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGGG-GGSCTTHHHHHTTTEEEESCCCHHH---HHTSTTEE
T ss_pred eeeecccccccCCHHHHHHHHHHHHhc---CCeEEEEECCCcc-ccCChhhhhhccccccccccCChHh---hhccCcee
Confidence 3445555554321 234455555544 5566665543311 1111112223345566665555543 45 5677
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCcc--CHHHHHHHHHHHHH
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 551 (611)
++|. + |=..++.||+.+|+|.|+....+ ...-+.+ .+.|... +.+ +.+++.++|+++|+
T Consensus 340 ~fIt--H--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~~t~~~l~~ai~~vL~ 405 (450)
T d2c1xa1 340 AFVT--H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----------EGGVFTKSGLMSCFDQILS 405 (450)
T ss_dssp EEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------GGGSCCHHHHHHHHHHHHH
T ss_pred EEEc--c--CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEe----------cCCCcCHHHHHHHHHHHhc
Confidence 7763 2 33568999999999999987553 2333434 4788865 433 68999999999999
Q ss_pred h
Q 007247 552 T 552 (611)
Q Consensus 552 ~ 552 (611)
|
T Consensus 406 d 406 (450)
T d2c1xa1 406 Q 406 (450)
T ss_dssp S
T ss_pred C
Confidence 7
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.42 E-value=0.0034 Score=63.70 Aligned_cols=140 Identities=12% Similarity=0.029 Sum_probs=74.1
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHH-HHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQ-LEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~-l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+++..+........+.+...+..+...+.++++.-.+. ...... .+.... +.++........+.. ..+..+|++|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~v~~~~pq~~~-l~~p~~~~fI 353 (461)
T d2acva1 277 VFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMICGWAPQVEV-LAHKAIGGFV 353 (461)
T ss_dssp EEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEESSCCHHHH-HHSTTEEEEE
T ss_pred eeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhcc--CCCeEEEecCCHHHH-HhcccCCEEE
Confidence 33444444444455554444444433355655554432 111111 112222 233444444444433 2568889888
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccc-eecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
.- +--.++.||+.+|+|.|+....+ ...- ++..+.|+.+..- . ......-+.++++++|.++|++
T Consensus 354 tH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~-~-~~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 354 SH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD-Y-RKGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp EC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS-C-CTTCCCCCHHHHHHHHHHHTCT
T ss_pred ec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc-c-cccCCccCHHHHHHHHHHHhhC
Confidence 32 33468999999999999976433 3333 3555678764100 0 0000014689999999999965
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.29 E-value=0.016 Score=58.69 Aligned_cols=129 Identities=8% Similarity=-0.062 Sum_probs=74.4
Q ss_pred EEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEe-CCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHH--HH
Q 007247 404 VIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLG-TGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 476 (611)
Q Consensus 404 ~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG-~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~ 476 (611)
+++..|.... ..-...++++++++ ..+++++- ... ......-.......+.|+.....++.. .++ ..
T Consensus 291 v~~~~gs~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~---~lL~hp~ 364 (473)
T d2pq6a1 291 VYVNFGSTTVMTPEQLLEFAWGLANC---KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KVLNHPS 364 (473)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHT---TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HHHTSTT
T ss_pred eeeccCccccccHHHHHHHHHHHHhc---CCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHH---HHhcCCc
Confidence 3444444432 22334555666655 44555433 211 111111122233345667666555544 356 57
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCC-ccCHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRAL 550 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~-~~d~~~la~~i~~ll 550 (611)
++++|. + |=..++.||+.+|+|.|+....+ ...-+ +..+.|... + .-+.++++++|.++|
T Consensus 365 ~~~fIt--H--GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~t~~~l~~ai~~vl 430 (473)
T d2pq6a1 365 IGGFLT--H--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI----------DTNVKREELAKLINEVI 430 (473)
T ss_dssp EEEEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------CSSCCHHHHHHHHHHHH
T ss_pred CcEEEe--c--CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee----------CCCcCHHHHHHHHHHHH
Confidence 777773 2 33468999999999999987543 33334 444678865 3 237899999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
+|
T Consensus 431 ~d 432 (473)
T d2pq6a1 431 AG 432 (473)
T ss_dssp TS
T ss_pred cC
Confidence 97
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=93.18 E-value=0.34 Score=46.58 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=70.4
Q ss_pred HHHHHHHHhCCCCCCCCcEE-EEEc-CcccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC----CC
Q 007247 386 LKEALQAEVGLPVDRNIPVI-GFIG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PE 457 (611)
Q Consensus 386 ~~~~~~~~~gl~~~~~~~~i-l~iG-rl~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~----~~ 457 (611)
.+......+++.. +++.| +..| +..+.|. .+..++.+..+.+++.+++++|...+ .+..+.+.... ..
T Consensus 166 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~ 241 (348)
T d1pswa_ 166 EKSYTCNQFSLSS--ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCS--SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhcccc--CCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccch--HHHHHHHHHhhhccccc
Confidence 3455666677654 33444 4444 4445565 55688888888777889999986542 33333333221 12
Q ss_pred ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 458 KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 458 ~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
.+..+ +..+-.++..+++.||++|-+.. -.+--|.++|+|+|+--
T Consensus 242 ~~~~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 242 WCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY 287 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEE
T ss_pred ccccccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEE
Confidence 23332 34455666789999999997764 34455999999999864
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=81.89 E-value=3.5 Score=35.27 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=76.8
Q ss_pred EEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc----------------
Q 007247 404 VIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK---------------- 464 (611)
Q Consensus 404 ~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~---------------- 464 (611)
+|++.|.... ++-.+...+.-+.|.+.++ +++.| |..-+.+.+.+=+.+.+..+.++..
T Consensus 6 v~~~~~~~~~~p~~~~~~~a~~lG~~la~~g~-~V~~G-G~~GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~ 83 (170)
T d1rcua_ 6 VVGYSGPVNKSPVSELRDICLELGRTLAKKGY-LVFNG-GRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTG 83 (170)
T ss_dssp EEECCSCTTSTTTGGGHHHHHHHHHHHHHTTC-EEEEC-CSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECC
T ss_pred EEEEecCCCCCcchHHHHHHHHHHHHHHHCCC-EEECC-CccCHHHHHHHHHHhcCCccccccchhhccCcccceeEEec
Confidence 4445445433 2455666666677766776 55555 4444555555555555444544321
Q ss_pred cC-hHHHHHHHHHccEEEeCCCCCCCcHH--HHHHHHcCCceEEcC-CcccccceecC--cceEEecccccccccCCccC
Q 007247 465 FN-IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMRYGTVPIVAS-TGGLVDTVEEG--FTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 465 ~~-~~~~~~i~~~aDv~l~pS~~E~~gl~--~lEAma~G~PvI~s~-~gg~~e~v~~g--~~G~l~~~~~~~~~~v~~~d 538 (611)
.+ .+....++..||++|... -++|.. ++|++..++|+|.-+ .|+..+.+.+. ..|++-. ...+ ...-.+|
T Consensus 84 ~~~~~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~-~~~~-~i~~~~~ 159 (170)
T d1rcua_ 84 LDFQMRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDN-RRIV-EIHQAWT 159 (170)
T ss_dssp CCHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSST-TCCS-CEEEESS
T ss_pred cchhhhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCH-HHcC-eEEEeCC
Confidence 11 122334788999988754 356764 789999999999875 45555555321 1233210 0000 0112457
Q ss_pred HHHHHHHHHH
Q 007247 539 VAAVSTTVRR 548 (611)
Q Consensus 539 ~~~la~~i~~ 548 (611)
++++.+.|++
T Consensus 160 ~ee~~~~l~~ 169 (170)
T d1rcua_ 160 VEEAVQIIEQ 169 (170)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888877765
|