Citrus Sinensis ID: 007346
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 607 | ||||||
| 255545548 | 596 | conserved hypothetical protein [Ricinus | 0.943 | 0.961 | 0.668 | 0.0 | |
| 449445232 | 615 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.965 | 0.602 | 1e-175 | |
| 356548629 | 621 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.969 | 0.587 | 1e-175 | |
| 224063152 | 591 | predicted protein [Populus trichocarpa] | 0.930 | 0.956 | 0.633 | 1e-171 | |
| 356551596 | 618 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.967 | 0.590 | 1e-171 | |
| 356515844 | 614 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.965 | 0.581 | 1e-168 | |
| 357489137 | 685 | hypothetical protein MTR_5g060420 [Medic | 0.988 | 0.875 | 0.576 | 1e-167 | |
| 356507676 | 609 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 0.967 | 0.574 | 1e-166 | |
| 449507725 | 536 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.858 | 0.972 | 0.619 | 1e-159 | |
| 449449867 | 619 | PREDICTED: uncharacterized protein LOC10 | 0.953 | 0.935 | 0.547 | 1e-148 |
| >gi|255545548|ref|XP_002513834.1| conserved hypothetical protein [Ricinus communis] gi|223546920|gb|EEF48417.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/604 (66%), Positives = 460/604 (76%), Gaps = 31/604 (5%)
Query: 1 MEKSEPTLVPQWLRNAGSVTGGGGSTNHFSSSSHSDVPSSVHHTRTR-NSKSGSDFDAPR 59
ME+SEPTLVP+WLR++GSV GGG S +HF+SSS SS H NSKS SDFD+PR
Sbjct: 1 MERSEPTLVPEWLRSSGSVPGGGSSAHHFASSSPHSDVSSSVHHSRSRNSKSTSDFDSPR 60
Query: 60 SAFLDRSSSSNSRRSSSNGSAKHAYSSFNRNHRDKDRERDKERSSYGDLWDRDSSDPLGS 119
SAFLDR+SSSNSRRSSSNGSAKHAYSSF+R+HRDKDRERDKER ++G+ WD D+SDPLGS
Sbjct: 61 SAFLDRTSSSNSRRSSSNGSAKHAYSSFSRSHRDKDRERDKERLNFGNHWDNDASDPLGS 120
Query: 120 ILSSRMEKD-LRRSHSMVSRKQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIKK 178
IL SR EKD LRRSHSMVSRK E+LPRR A D + SNSNH+NGN ++GG G+SI K
Sbjct: 121 IL-SRNEKDALRRSHSMVSRKLGEVLPRRFAADLRNGSNSNHVNGNGLISGGGVGNSIPK 179
Query: 179 VVFEKDFPSLGSEEKQGVPDIGRVSSPGLSSAVQSLPVGNSTLIGGEGWTSALAEVPPII 238
VFEKDFPSLGSEE+QG PDIGRVSSPGLS+AVQSLPV +S LIGGEGWTSALAEVP II
Sbjct: 180 AVFEKDFPSLGSEERQGAPDIGRVSSPGLSTAVQSLPVSSSALIGGEGWTSALAEVPAII 239
Query: 239 GNSSSGSLSAQTGSGTTLSGPPSVMAGLNMAEALAQAPSRARTAPQLSVKTQRLDELTIK 298
GN+SSGS S+ T+ SG PS +AGLNMAEAL QAP+R RTAPQLSV+TQRL+EL IK
Sbjct: 240 GNNSSGSSSSVQTVATSASGAPSTVAGLNMAEALTQAPTRTRTAPQLSVQTQRLEELAIK 299
Query: 299 KSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAVKNGQQQPAPLHHANQSLHVGN 358
+S+QLIPVTPSMPKSSVLN SDKSKPKT VR S+M+MA KN QQQP+ LH QSL G+
Sbjct: 300 QSRQLIPVTPSMPKSSVLNSSDKSKPKTVVRSSEMNMAPKNLQQQPSSLHAVTQSLAGGH 359
Query: 359 VKTDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNNANSRATTSQSTAVPSVASATPRS 418
VK+D K SHGKL VLKP WENG S SPKD A+P NNA RA SQ A PSV SA RS
Sbjct: 360 VKSDASKASHGKLFVLKPGWENGASPSPKDIANP-NNAG-RAANSQLAAAPSVPSAPLRS 417
Query: 419 PNNPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNLLKKKTSMNTSGLPADSGT 478
PNNPKL +GERK+ +LN ISGF+ E+RP LSQTQSR+DFFNLLKKKT N+S DS +
Sbjct: 418 PNNPKLSAGERKSASLNLISGFNVEKRPLLSQTQSRHDFFNLLKKKTLKNSSTALTDSAS 477
Query: 479 DIPSPAGEKHGEVTKDVISAPSSPHVIENGAQVTINGGTHKETQRFSGAGEKTMSRYAAV 538
I SP EK E+ K+ SAPS P I+NG+++T NGGT +E
Sbjct: 478 AISSPTNEKACEINKEAASAPSCPQAIKNGSELTGNGGTCEEVS---------------- 521
Query: 539 DPDEEAAFLRSLGWEENSGEDEGLTEEEIKAFYQEFEK--------RGMQLKLPQFHATS 590
+EEAAFLRSLGWEENSGEDEGLTEEEI AF QE K RGMQ KL + HAT
Sbjct: 522 --EEEAAFLRSLGWEENSGEDEGLTEEEINAFIQECMKLKPSLKVCRGMQQKLIESHATG 579
Query: 591 VVGA 594
+V A
Sbjct: 580 LVRA 583
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445232|ref|XP_004140377.1| PREDICTED: uncharacterized protein LOC101213347 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356548629|ref|XP_003542703.1| PREDICTED: uncharacterized protein LOC100800475 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224063152|ref|XP_002301016.1| predicted protein [Populus trichocarpa] gi|222842742|gb|EEE80289.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356551596|ref|XP_003544160.1| PREDICTED: uncharacterized protein LOC100799079 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356515844|ref|XP_003526607.1| PREDICTED: uncharacterized protein LOC100812026 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357489137|ref|XP_003614856.1| hypothetical protein MTR_5g060420 [Medicago truncatula] gi|355516191|gb|AES97814.1| hypothetical protein MTR_5g060420 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356507676|ref|XP_003522590.1| PREDICTED: uncharacterized protein LOC100791100 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449507725|ref|XP_004163112.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101231906 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449449867|ref|XP_004142686.1| PREDICTED: uncharacterized protein LOC101213356 [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 607 | ||||||
| TAIR|locus:2203084 | 581 | AT1G36990 [Arabidopsis thalian | 0.820 | 0.857 | 0.445 | 2.7e-93 | |
| TAIR|locus:2133564 | 551 | AT4G08510 [Arabidopsis thalian | 0.645 | 0.711 | 0.408 | 1.2e-63 |
| TAIR|locus:2203084 AT1G36990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 232/521 (44%), Positives = 294/521 (56%)
Query: 1 MEKSEPTLVPQWLRNAGSVTXXXXXXXXXXXXXXXXXXXXXXX-TRTRNSKSGSDFDAPR 59
M+K E +L P+WLR++G + +R RNS+S SD D+
Sbjct: 1 MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60
Query: 60 SAFLDXXXXXXXXXXXXXXXAKHAYSSFNRNHXXXXXXXXXXXS--SYGDLWDRDSSDPL 117
S FLD AKHAYSSFN N SY D WD D+S PL
Sbjct: 61 SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120
Query: 118 GSILSSRMEKDLRRSHSMVSRKQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIK 177
+IL+ R LRRSHSMV+RKQ E L R + V +SN NGN ++G S G+S +
Sbjct: 121 RTILTGRDPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSFQ 180
Query: 178 KVVFEKDFPSLGSEEKQGVPDIGRVSSPGLSSAVQSLPVGNSTLIGGEGWTSALAEVPPI 237
+ F+KDFPSLG+EEKQ D+ RVSSPG+SS VQ+LPVGNS LIGGEGWTSALAEVP +
Sbjct: 181 RTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALIGGEGWTSALAEVPNV 240
Query: 238 IXXXXXXXXXX--XXXXXXXXXXPPSVMAGLNMAEALAQAPSRARTAPQLSVKTQRLDEL 295
I PS GLNMAEAL QAP+R T PQ SVKTQRL++L
Sbjct: 241 IEKACTGSLTSPKANAVSAGTLTGPS---GLNMAEALVQAPARTHTPPQGSVKTQRLEDL 297
Query: 296 TIKKSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAV-KNGQQQPAPLHHANQSL 354
IK+S+QLIPV PS PK LN SDKSK K VR + +A +N QQPA L + QS
Sbjct: 298 AIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSFQSN 357
Query: 355 HVGNVKTDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNNANSRATTSQSTA-VPSVAS 413
G +K P+ KLLVLKPA ENGVS + K+ SP+ N N+RA +SQ + S S
Sbjct: 358 PSGQIK---PEK---KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNTQSTQS 410
Query: 414 ATPRSPNNPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNLLKKKTSMNTSGL- 472
A RS N+PK G A+A + ISG + E++PS +Q QSR+ F++ LK+K + +TS
Sbjct: 411 APVRSTNSPKELKG---ASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTSITT 467
Query: 473 -PADSGTDIPSPAGEKHGEVTKDVISAPSSPHVIENGAQVT 512
P S T S K +KD+I++ S +G +VT
Sbjct: 468 DPVSSSTSASSSVEVKLNS-SKDLIASDPSSSQATSGVEVT 507
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| TAIR|locus:2133564 AT4G08510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 607 | |||
| PF15337 | 97 | Vasculin: Vascular protein family Vasculin-like 1 | 95.89 | |
| PF10231 | 126 | DUF2315: Uncharacterised conserved protein (DUF231 | 83.56 |
| >PF15337 Vasculin: Vascular protein family Vasculin-like 1 | Back alignment and domain information |
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Probab=95.89 E-value=0.011 Score=53.24 Aligned_cols=34 Identities=38% Similarity=0.726 Sum_probs=28.8
Q ss_pred HHHHHHHHhhCCccCCCCCC---CCCHHHHHHHHHHH
Q 007346 541 DEEAAFLRSLGWEENSGEDE---GLTEEEIKAFYQEF 574 (607)
Q Consensus 541 eeE~afLrSLGWee~~~~~e---~lTeEEi~af~~~~ 574 (607)
|-|-..||..||.|..+.|| +|||+|+++|.-+-
T Consensus 10 EaEhRLLk~MGWqEy~eNde~~~PlTEDElkEF~~ks 46 (97)
T PF15337_consen 10 EAEHRLLKAMGWQEYPENDENCLPLTEDELKEFQVKS 46 (97)
T ss_pred HHHHHHHHHhcccccCcCCcccCcCcHHHHHHHHHHH
Confidence 77889999999999775555 89999999998653
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| >PF10231 DUF2315: Uncharacterised conserved protein (DUF2315); InterPro: IPR018796 This entry consists of small conserved proteins found from worms to humans | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 607 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-10 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 61.8 bits (149), Expect = 4e-10
Identities = 76/561 (13%), Positives = 142/561 (25%), Gaps = 208/561 (37%)
Query: 88 NRNHRDKDRERDKERSSYGDL-----------WD-RDSSDPLGSILSSRMEKDLRRSHSM 135
+ +H D E + + Y D+ +D +D D SILS + S
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 136 VSR----------KQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIKKVVFEKDF 185
VS KQ E++ + V+ + N + S IK E+
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQK--FVEEVLRINYKFL-----------MSPIKT---EQRQ 104
Query: 186 PSLGSEE----------------KQGVPDIGRVSSPGLSSAVQSL-PVGNSTLIGGEGWT 228
PS+ + K V + L A+ L P N + G
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK--LRQALLELRPAKNVLIDG----- 157
Query: 229 SALAEVPPIIGNSSSGSLSAQTGSGTTLSGPPSVMAGLNMAEALAQAPSRARTAPQ---L 285
GSG + +A + + + + L
Sbjct: 158 --------------------VLGSGK------TWVA----LDVCLSYKVQCKMDFKIFWL 187
Query: 286 SVKTQRLDELTIKKSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAVKNGQQQPA 345
++K E ++ ++L+ P + + + +RI + ++ +
Sbjct: 188 NLKNCNSPETVLEMLQKLL--YQIDPNWTSRSDHSSNIK---LRIHSIQAELRRLLKSK- 241
Query: 346 PLHHANQSLHVGNVKTDVPKTSHGKLLVLKPAWENGVSHSPK-----DGASPTNNANSRA 400
P + LLVL + K + +
Sbjct: 242 PYENC--------------------LLVLLNVQ------NAKAWNAFNLSCKI-----LL 270
Query: 401 TTSQSTAVPSVASATPRSPNNPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNL 460
TT V L + +L+ +L+ + + +L
Sbjct: 271 TTRFK----QVTDF---------LSAATTTHISLD-------HHSMTLTPDEVK----SL 306
Query: 461 LKKKTSMNTSGLPADSGTDIP---SPAGEKHGEVTKDVISAPSSPHVIENGAQVTINGGT 517
L K LP + T P S E +D +N V +
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAES----IRD------GLATWDNWKHVNCD--K 354
Query: 518 HKETQRFSGAGEKTMSRYAAVDPDEEAAFLRSLG----------------WEENSGEDEG 561
S ++P E L W +
Sbjct: 355 LTTIIESS---------LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD------- 398
Query: 562 LTEEEIKAFYQEFEKRGMQLK 582
+ + ++ + K + K
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEK 419
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00