Citrus Sinensis ID: 007432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600----
Protein Sequence
MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICVEVEPSESSPTSARSEFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQSCMPEEDESKPIVAEGVADAEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDERTKGRLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEEcEEcccccccccccccEEEEEccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccHHccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccEEccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccccEccccccEEEEEccccccccccccccccccccEEEEcccccEEcccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHHHccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccEEEEcccccccccccccccccccccccEEEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mavlslnslplgfrfrptdEELVDFYLRMKinghndevsVISEidvckrepwdlpdlsviktkdrewfffcpqdrkypnghrlnrATAAGYWkatgkdrkiksgnhliGMKKTLVFhmgrapkgkrtnWVMHEYrattddldgtkpgqSAFVLCRLFKKQDESVEICVevepsessptsarsefaldqtlldckpsvSHLAEKVTSNLqecqtksseFTATEIDQAMQENFGDVFTKVmsepldctlfpplhspfpvekgssstshsvrndlttidekgqlpsesDAYITEFLDSIlntsdenlfdesdcqwnsffvsetpsnmtfvkdsgscsesdaevaqarpnpditsslcfkdniarasplkmlrmpedfrtvtsqnsdnepsinfrnscylddfcnadvesceqdvfssvsttgqfhdafggfgdsnnhavgvASRNIVATGIRtrmrnpqslpyregfvnvkqgdaprrLRLQCKLqvgpvrlqscmpeedeskpivaegvadaekelpvnaatgamyelkgdsqlasnensniseeqttdertkgrlKSTVLmdkdtsntfraghsnrSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Flexible Loop (DISEMBL)
mavlslnslplgfrfrpTDEELVDFYLRMKINGHNDEVSVISeidvckrepwdlpdlsviktkdrEWFFfcpqdrkypnghrlnrATAAgywkatgkdrkiksgnhlIGMKKTLVFHMGRAPKGKRTNWVMHEYRAttddldgtkPGQSAFVLCRLFKKQDESVEICVevepsessptsaRSEFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPfpvekgssstshsvrndlttidekgqlpseSDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQArpnpditsslcfKDNIARASPLKMLRMPEDFRtvtsqnsdnepsiNFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRtrmrnpqslpyregfVNVKQGDAPRRLRLQCKLQVgpvrlqscmpeedeskPIVAEGVADAEKELPVNAATGAMYELKGDsqlasnensniseeqttdertkgrlkstvlmdkdtsntfraghsnrSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Low Complexity Region (SEG)
MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDesveicvevepsessptsARSEFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQSCMPEEDESKPIVAEGVADAEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDERTKGRLKSTVLMDKDTSNTFRAGHSNRSfavlfraaavvvmfaILVSTWRCLCLNF
Disordered region (IsUnstruct)
*******SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEIC*************************************************************ENFGDVFTKVMSEPLDCTLFPP************************************AYITEFLDSILNTSDENLFDESDCQWNSFFVS***********************************CFK*******************************INFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMR****LPYREGFVNVKQGDAPRRLRLQCKLQVGPVR*************************************************************************************NRSFAVLFRAAAVVVMFAILVSTWRCLCL**
Disordered Region (DISOPRED)
******N**PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA*************AFVLCRLF**********************************************************************************************************************************YITEFLDSILNT*******************************GSCSESDAEV**********************************************************FCN**************************************************************************L***************************************************************************************************SFAVLFRAAAVVVMFAILVSTWRCLCLNF
Disordered Region (DISEMBL)
MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEIC***************EFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFP***********VRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTF*****************RPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQSCMPEEDESKPIVAEGVADAEKELPVNAATGAMYELKGDS********************KGRLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Disordered Region (DISPRO)
*******SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQD******************************************************************************SEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTV********PSINFRNSCYLDDFCNADVESCEQDVFS******QFHDAFGGF***NNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQ*********************************************************************RLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICVEVEPSESSPTSARSEFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQSCMPEEDESKPIVAEGVADAEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDERTKGRLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRCLCLNF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	604	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	no	no	0.263	0.280	0.559	5e-50
Q7GCL7	489	NAC domain-containing pro	no	no	0.253	0.312	0.535	1e-45
Q9FWX2	395	NAC domain-containing pro	no	no	0.261	0.4	0.521	3e-45
Q9FLJ2	336	NAC domain-containing pro	no	no	0.253	0.455	0.514	2e-44
Q94F58	340	NAC domain-containing pro	no	no	0.236	0.420	0.513	8e-43
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.266	0.472	0.5	1e-42
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.251	0.498	0.518	1e-41
O49255	268	NAC transcription factor	no	no	0.266	0.600	0.491	1e-40
Q93VY3	297	NAC domain-containing pro	no	no	0.269	0.548	0.484	1e-40
Q9LDY8	317	NAC domain-containing pro	no	no	0.25	0.476	0.509	2e-40

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  199 bits (506), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 115/159 (72%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           M   S+ SL  GFRF PTDEELV +YL+ K+     +   IS  D+ K EPWDLPD S +
Sbjct: 1   MGRGSVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKL 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           K++D EW+FF   D+KY NG + NRAT  GYWK TGKDR+I++G+ ++GMKKTLV+H GR
Sbjct: 61  KSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
           AP+G+RTNWVMHEYR + +DL      Q A+VLCR+F+K
Sbjct: 121 APRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQK 159

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  185 bits (469), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 100/153 (65%)

Query: 9   LPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWF 68
           LP GF F P D EL+  YL+ KI+G   E  +I E+D+ K EPWDLP    + T+D +W 
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 69  FFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTN 128
           FF  +DRKYPNG R NRAT AGYWK+TGKDR IK G   IG KKTLVFH GR P G+RT 
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 129 WVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQD 161
           W+MHEY     +       + A+VLCR+ K+ D
Sbjct: 129 WIMHEYYIDERECQACPDMKDAYVLCRITKRND 161

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  183 bits (465), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 118/161 (73%), Gaps = 3/161 (1%)

Query: 5   SLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKD 64
           S + +P GFRF PTDEELVD+YLR K+     E+  I +ID+ K EPWDL +L  I  ++
Sbjct: 3   SFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEE 62

Query: 65  R-EWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPK 123
           + +W+FF  +D+KYP G R NRAT AG+WKATG+D+ I   + LIGM+KTLVF+ GRAP 
Sbjct: 63  QSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPN 122

Query: 124 GKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESV 164
           G++++W+MHEYR  TD+ +GT P +  +V+CR+FKK+  +V
Sbjct: 123 GQKSDWIMHEYRLETDE-NGT-PQEEGWVVCRVFKKRLAAV 161

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 14/167 (8%)

Query: 9   LPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWF 68
           LP GFRF PTDEEL+  YL  K+   +     I E+D+ K EPW+LP ++  K  ++EW+
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA--KMGEKEWY 73

Query: 69  FFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTN 128
           FFC +DRKYP G R NRAT AGYWKATGKD++I  G  L+GMKKTLVF+ GRAPKG++TN
Sbjct: 74  FFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKTN 133

Query: 129 WVMHEYRATTDDLDGT-------KPGQSAFVLCRLFKKQDESVEICV 168
           WVMHEYR     L+G        K  ++ +V+CR+F+K     +I +
Sbjct: 134 WVMHEYR-----LEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPI 175

Arabidopsis thaliana (taxid: 3702)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score =  175 bits (444), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 77/150 (51%), Positives = 108/150 (72%), Gaps = 7/150 (4%)

Query: 12  GFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFC 71
           GF+F PTD EL+ +YL+ K++G    V VI ++++   EPWDLPD S++K+ D EWFFFC
Sbjct: 24  GFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKS-DSEWFFFC 82

Query: 72  PQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVM 131
            + +KYP+G +  RAT  GYWKATGK+R +KSG+ +IG K+TLVFH+GRAPKG+RT+W+M
Sbjct: 83  ARGKKYPHGSQNRRATKMGYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGERTDWIM 142

Query: 132 HEYRATTDDLDGTKPGQSAFVLCRLFKKQD 161
           HEY      LD       A V+CR+ + ++
Sbjct: 143 HEYCVKGVSLD------DAMVVCRVRRNKE 166

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 109/162 (67%), Gaps = 1/162 (0%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           M   S   +P GFRF PTDEEL+ +YL+ KI+    E+ VI E+D+ K EPWDL +   I
Sbjct: 1   MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI 60

Query: 61  -KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMG 119
             T   EW+FF  +DRKYP G R NRAT AG+WKATG+D+ I++    IGM+KTLVF+ G
Sbjct: 61  GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG 120

Query: 120 RAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQD 161
           RAP G++T+W+MHEYR    D     P +  +V+CR+F K++
Sbjct: 121 RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKN 162

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  171 bits (434), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/160 (51%), Positives = 111/160 (69%), Gaps = 8/160 (5%)

Query: 5   SLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI-KTK 63
           S   +P GFRF PTDEEL+ +YL+ KI+    E+ VI E+D+ K EPWDL D   I  T 
Sbjct: 4   SNGGVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTP 63

Query: 64  DREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPK 123
             EW+FF  +DRKYP G R NRAT +G+WKATG+D+ I++    IGM+KTLVF+ GRAP 
Sbjct: 64  QNEWYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPH 123

Query: 124 GKRTNWVMHEYRA--TTDDLDGTKPGQSAFVLCRLFKKQD 161
           G++T+W+MHEYR   T DD     P +  +V+CR+FKK++
Sbjct: 124 GQKTDWIMHEYRIEDTEDD-----PCEDGWVVCRVFKKKN 158

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  168 bits (426), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/167 (49%), Positives = 111/167 (66%), Gaps = 6/167 (3%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           M V S ++LP GFRF PTDEEL+ +YLR +       VS+I E+D+ K +PW LP+ +  
Sbjct: 1   MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKT-- 58

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           +  + EW+FF P++RKYPNG R NRA  +GYWKATG D+ I SG+  +G+KK LVF+ GR
Sbjct: 59  EFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGR 118

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSA----FVLCRLFKKQDES 163
            PKG +T+W+MHEYR        TK   S     +VLCR++KK+  S
Sbjct: 119 PPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGAS 165

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  168 bits (425), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 2/165 (1%)

Query: 4   LSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTK 63
           L+  SLP GFRF PTDEEL+  YL  K+ G++  + VI +ID+ K +PWDLP  ++   K
Sbjct: 9   LAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEK 68

Query: 64  DREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPK 123
             EW+FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF+ G+APK
Sbjct: 69  --EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPK 126

Query: 124 GKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV 168
           G +TNW+MHEYR               +VLCR++KK   S    V
Sbjct: 127 GTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAV 171

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  167 bits (424), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/153 (50%), Positives = 102/153 (66%), Gaps = 2/153 (1%)

Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           SLP GFRF PTDEEL+  YL  K  GH+  + +I+EID+ K +PW LP  ++   K  EW
Sbjct: 13  SLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEK--EW 70

Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF++G+APKG +T
Sbjct: 71  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKT 130

Query: 128 NWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQ 160
           NW+MHEYR               +VLCR++KKQ
Sbjct: 131 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 163

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	604
255560596	597	transcription factor, putative [Ricinus	0.938	0.949	0.420	1e-103
449483232	606	PREDICTED: NAC domain-containing protein	0.715	0.712	0.473	1e-101
449439045	596	PREDICTED: NAC domain-containing protein	0.715	0.724	0.473	1e-101
302144000	578	unnamed protein product [Vitis vinifera]	0.860	0.899	0.397	4e-99
225455179	653	PREDICTED: uncharacterized protein LOC10	0.860	0.796	0.397	5e-99
302398999	541	NAC domain class transcription factor [M	0.811	0.905	0.408	5e-96
224134993	381	NAC domain protein, IPR003441 [Populus t	0.584	0.926	0.545	1e-95
147837829	720	hypothetical protein VITISV_034893 [Viti	0.706	0.593	0.441	3e-95
224118488	316	NAC domain protein, IPR003441 [Populus t	0.490	0.936	0.574	1e-88
388506164	642	unknown [Medicago truncatula]	0.678	0.638	0.425	4e-88

>gi|255560596|ref|XP_002521312.1| transcription factor, putative [Ricinus communis] gi|223539497|gb|EEF41086.1| transcription factor, putative [Ricinus communis]

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 262/623 (42%), Positives = 343/623 (55%), Gaps = 56/623 (8%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVLSLNSLPLGFRFRPTDEELV+FYLR+KING++ +V VI E+DVCK EPWDLPD+S+I
Sbjct: 1   MAVLSLNSLPLGFRFRPTDEELVNFYLRLKINGNDKDVRVIRELDVCKWEPWDLPDMSII 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           KT D+EWFFFCP DRKYPNGHRLNRAT+ GYWKATGKDRKIKSGN LIGMKKTLVF+ GR
Sbjct: 61  KTNDQEWFFFCPLDRKYPNGHRLNRATSKGYWKATGKDRKIKSGNTLIGMKKTLVFYTGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICVEVEPSESSPTSA 180
           AP+G RT+WV+HEYRAT DDLDGTKPGQ+ FV+CRLFKKQD++VE    +   E   T+ 
Sbjct: 121 APRGTRTHWVIHEYRATEDDLDGTKPGQNPFVICRLFKKQDDTVE---NLNLDEHEATTL 177

Query: 181 RSEFALDQTLLDCKPSVSHLAEKVTSNLQECQT------KSSEFTATEIDQAMQENFGDV 234
            S  A  Q+ L+   S   LA+  T N  EC        ++++    E D  ++E+  + 
Sbjct: 178 LSPTA-PQSSLEAAESDLALAQVNTPN--ECSNAFVEGDQTADLAVLEEDTQLEEDL-NW 233

Query: 235 FTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLD 294
           F +    PLD  LF PLH+    E G  ST ++  NDL   +  G       AY+T FL+
Sbjct: 234 FIQPPG-PLDDKLFSPLHAQVQAEGG--STYYTSGNDLGDHNNNGGTNETDAAYVTNFLN 290

Query: 295 SILNTSDENLFDESDCQWNSFF--VSETPSNMTFVKDSGSCSESDAEVAQ-ARPNPDITS 351
            IL    E  FDES C     F   SE    +   +     S  +  + Q      ++ S
Sbjct: 291 DILQQPVEYSFDESGCINPIAFDEDSEAFGGLDVKRTQIVVSGHNQIIVQCGSLEEELQS 350

Query: 352 SLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCNADVESCEQDV 411
           S+  +D+I R   L +   P D+RT T   S N  S+     C+            E+  
Sbjct: 351 SIWTEDDIDRKPSLHIETTPGDYRTATYDLSRNLGSV-----CH------------EKQN 393

Query: 412 FSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYREGFVN-VKQG 470
            +S S   QF  +       +N    + S     TGIR R RN Q+LP    F N   QG
Sbjct: 394 LASSSAADQFSSS-----KESNPMNQIGSSESPGTGIRIRARNAQNLPI---FSNSATQG 445

Query: 471 DAPRRLRLQCKLQVGPVRL------QSCMPEEDESKPIVAEGVADAEKELPVNAATGAMY 524
            A RRLRLQCKLQV P+         S + +E   +  V E V   EK+   +  + ++ 
Sbjct: 446 LASRRLRLQCKLQVQPLCFGEISIDGSSISKEHILEETVLEEVKVTEKDTSHSVGSSSII 505

Query: 525 E---LKGDSQLASNENSNISEEQTTDERTKGRLKSTVLMDKDTSNTFRAGHSNRSF--AV 579
           +    +  S   + E+   SEE T++     R +S  +  K  S   +A  ++       
Sbjct: 506 DGNKHQKPSVSEAREHIKFSEEITSNSGNIMRKRSNAVSKKVPSIPLKASSTHHPMWSKS 565

Query: 580 LFRAAAVVVMFAILVSTWRCLCL 602
           + R   ++ +  IL S WRCL L
Sbjct: 566 MLRVVVLLSLLLILASIWRCLFL 588

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449483232|ref|XP_004156529.1| PREDICTED: NAC domain-containing protein 74-like [Cucumis sativus]

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/501 (47%), Positives = 290/501 (57%), Gaps = 69/501 (13%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVL+LNSLPLGFRFRPTDEEL+D+YLR KING++++VSVI E+DVCK EPWDLPDLS+I
Sbjct: 1   MAVLTLNSLPLGFRFRPTDEELIDYYLRSKINGNHEDVSVIREVDVCKWEPWDLPDLSII 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           KTKD EWFFFCPQDRKYPNGHRL RAT AGYWKATGKDRKIKSG  LIGMKKTLVF+ GR
Sbjct: 61  KTKDPEWFFFCPQDRKYPNGHRLKRATVAGYWKATGKDRKIKSGTKLIGMKKTLVFYKGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPSESSPT 178
           APKGKRTNWV+HEYRAT  +LDGT PGQSAFVLCRLFKKQDES+E     E E + SSPT
Sbjct: 121 APKGKRTNWVVHEYRATLKELDGTNPGQSAFVLCRLFKKQDESIEGSNGDEAEAAISSPT 180

Query: 179 SARS-----EFALDQTLLDCKPSVSHLAEK---VTSNLQECQTKSSEFTATEIDQAMQEN 230
           +A S     +   +  L    PS+   AE    V S   E    S++    +   A  + 
Sbjct: 181 TAESSPGPGDSHSEPILPLVSPSLQRQAESSDGVLSETVEHTDGSADIHGFDSYNAEMDT 240

Query: 231 FGD---VFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKG---QLPS- 283
             D    F    ++PLD  L+ PLHS    E GSS   +S  N L   +  G   QLPS 
Sbjct: 241 HPDEERKFCGSENKPLDSKLYSPLHSQLQAELGSSGIYYSDSNYL-NYEANGNAEQLPSG 299

Query: 284 -ESDAYITEFLDS-ILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVA 341
            E   +I + LDS + N  D  L D+ +       +SE P+N     D+G   + +A+  
Sbjct: 300 TEESDFINQMLDSFVYNLDDFPLEDQQEF----MSLSEFPNNTMDSLDNGFFGKVEADNV 355

Query: 342 QARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCN 401
           +A   PD  SS+C +D I R +P+                              +D    
Sbjct: 356 KAMVMPDFESSICLED-IDRKTPI------------------------------ID---- 380

Query: 402 ADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYR 461
                    V +S    GQF++  G   +S N +  V S +   TGI+   R P+SL + 
Sbjct: 381 --------HVGTSPPEQGQFYNISGSLQESYNQSSAVGSMD-AGTGIQRISRQPRSLQHS 431

Query: 462 EGFVNVKQGDAPRRLRLQCKL 482
             F    QG APRRLRLQ KL
Sbjct: 432 NEFSTF-QGTAPRRLRLQRKL 451

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439045|ref|XP_004137298.1| PREDICTED: NAC domain-containing protein 74-like [Cucumis sativus]

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/501 (47%), Positives = 290/501 (57%), Gaps = 69/501 (13%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVL+LNSLPLGFRFRPTDEEL+D+YLR KING++++VSVI E+DVCK EPWDLPDLS+I
Sbjct: 1   MAVLTLNSLPLGFRFRPTDEELIDYYLRSKINGNHEDVSVIREVDVCKWEPWDLPDLSII 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           KTKD EWFFFCPQDRKYPNGHRL RAT AGYWKATGKDRKIKSG  LIGMKKTLVF+ GR
Sbjct: 61  KTKDPEWFFFCPQDRKYPNGHRLKRATVAGYWKATGKDRKIKSGTKLIGMKKTLVFYKGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPSESSPT 178
           APKGKRTNWV+HEYRAT  +LDGT PGQSAFVLCRLFKKQDES+E     E E + SSPT
Sbjct: 121 APKGKRTNWVVHEYRATLKELDGTNPGQSAFVLCRLFKKQDESIEGSNGDEAEAAISSPT 180

Query: 179 SARS-----EFALDQTLLDCKPSVSHLAEK---VTSNLQECQTKSSEFTATEIDQAMQEN 230
           +A S     +   +  L    PS+   AE    V S   E    S++    +   A  + 
Sbjct: 181 TAESSPGPGDSHSEPILPLVSPSLQRQAESSDGVLSETVEHTDGSADIHGFDSYNAEMDT 240

Query: 231 FGD---VFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKG---QLPS- 283
             D    F    ++PLD  L+ PLHS    E GSS   +S  N L   +  G   QLPS 
Sbjct: 241 HPDEERKFCGSENKPLDSKLYSPLHSQLQAELGSSGIYYSDSNYL-NYEANGNAEQLPSG 299

Query: 284 -ESDAYITEFLDS-ILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVA 341
            E   +I + LDS + N  D  L D+ +       +SE P+N     D+G   + +A+  
Sbjct: 300 TEESDFINQMLDSFVYNLDDFPLEDQQEF----MSLSEFPNNTMDSLDNGFFGKVEADNV 355

Query: 342 QARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINFRNSCYLDDFCN 401
           +A   PD  SS+C +D I R +P+                              +D    
Sbjct: 356 KAMVMPDFESSICLED-IDRKTPI------------------------------ID---- 380

Query: 402 ADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYR 461
                    V +S    GQF++  G   +S N +  V S +   TGI+   R P+SL + 
Sbjct: 381 --------HVGTSPPEQGQFYNISGSLQESYNQSSAVGSMD-AGTGIQRISRQPRSLQHS 431

Query: 462 EGFVNVKQGDAPRRLRLQCKL 482
             F    QG APRRLRLQ KL
Sbjct: 432 NEFSTF-QGTAPRRLRLQRKL 451

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302144000|emb|CBI23105.3| unnamed protein product [Vitis vinifera]

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 259/651 (39%), Positives = 331/651 (50%), Gaps = 131/651 (20%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVLS NSLPLGFRFRPTDEEL+  YLR+KI+G+++EV VI EIDVCK EPWDLPDLS I
Sbjct: 1   MAVLSFNSLPLGFRFRPTDEELITHYLRLKISGNDEEVRVIREIDVCKWEPWDLPDLSEI 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           +T D EWFFFCP+DRKYPNGHRLNRATAAGYWKATG+DR+IKS   L+GMKKTLVFH GR
Sbjct: 61  RTNDMEWFFFCPRDRKYPNGHRLNRATAAGYWKATGRDRQIKSKTRLVGMKKTLVFHTGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPSESSPT 178
           AP GKRT WVMHEYRAT  +LDGT PGQ+AFVLCRLFKKQDE  E     E+EP+  SPT
Sbjct: 121 APHGKRTVWVMHEYRATAKELDGTHPGQAAFVLCRLFKKQDEKAEGSNPDEIEPTVPSPT 180

Query: 179 SARS--EFALDQTLLDCKPSVSHLAEK-------VTSNLQECQTKSS------------- 216
            A S  E   +  L    P      E+          N  E   +SS             
Sbjct: 181 PANSPEETEFEVALPQVAPVEKQEEEQPGFAEGCPGENPDEMTAESSVPVGFCSNPLNAY 240

Query: 217 -------EFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHS----------PFPVEK 259
                  + TA E+D ++QE+FG  F   M E LD  LF P+HS           +PV  
Sbjct: 241 DEEDSLAKLTAAEVDPSLQEDFG-FFQDQMLEQLDYQLFSPVHSQWHMGLESYVSYPV-T 298

Query: 260 GSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSE 319
           G+ S  H+  N+  T        +E D  +TEFL+S+L                      
Sbjct: 299 GNFSNGHNGENEYGT--------NEPDPDVTEFLESVL---------------------- 328

Query: 320 TPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTS 379
                   K++GSCSESD  V+Q + + +  +S    DNI   +  +M      F+T T 
Sbjct: 329 --------KENGSCSESDT-VSQTQLDVEFDASAVIIDNIKTEALQEMETNISAFKTTTG 379

Query: 380 QNSDNEPSIN--FRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVG 437
            NS  E S N  F ++ + D            D FS  ST  Q  + F  F +S+++   
Sbjct: 380 -NSAVEYSGNMGFSHNNFGD------------DAFSVGSTVNQLDNLFNRFEESSSYTNA 426

Query: 438 VASRNIVATGIRTRMRNPQSLPYREGFVNVK-QGDAPRRLRLQCKLQVGPVRLQSCMPEE 496
           V S +I    I+ R R PQ    +    N   QG A RR+RLQ KL+V      +C    
Sbjct: 427 VGSSDITGPVIKRRTRQPQ---IQSDANNCGPQGTARRRIRLQTKLEV----RHACSMSR 479

Query: 497 DESKPIVAEGVADAEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDE-------- 548
           D           + ++E  V  A+      + D+   ++EN  I  ++   E        
Sbjct: 480 D----------LNCKEEAEVGQAS------QSDTSGTTDENQKIEVKKVDQELKMSMSLL 523

Query: 549 RTKGRLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRC 599
           R + + K   +  K       A H   S   L R   +V +F I + TW C
Sbjct: 524 RFRSKYKVPSVFSKVPVPP--ACHLIASSVSLLRVVGLVGLFVIFIGTWIC 572

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455179|ref|XP_002270158.1| PREDICTED: uncharacterized protein LOC100255616 [Vitis vinifera]

 Score =  368 bits (944), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 259/651 (39%), Positives = 331/651 (50%), Gaps = 131/651 (20%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVLS NSLPLGFRFRPTDEEL+  YLR+KI+G+++EV VI EIDVCK EPWDLPDLS I
Sbjct: 76  MAVLSFNSLPLGFRFRPTDEELITHYLRLKISGNDEEVRVIREIDVCKWEPWDLPDLSEI 135

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           +T D EWFFFCP+DRKYPNGHRLNRATAAGYWKATG+DR+IKS   L+GMKKTLVFH GR
Sbjct: 136 RTNDMEWFFFCPRDRKYPNGHRLNRATAAGYWKATGRDRQIKSKTRLVGMKKTLVFHTGR 195

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPSESSPT 178
           AP GKRT WVMHEYRAT  +LDGT PGQ+AFVLCRLFKKQDE  E     E+EP+  SPT
Sbjct: 196 APHGKRTVWVMHEYRATAKELDGTHPGQAAFVLCRLFKKQDEKAEGSNPDEIEPTVPSPT 255

Query: 179 SARS--EFALDQTLLDCKPSVSHLAEK-------VTSNLQECQTKSS------------- 216
            A S  E   +  L    P      E+          N  E   +SS             
Sbjct: 256 PANSPEETEFEVALPQVAPVEKQEEEQPGFAEGCPGENPDEMTAESSVPVGFCSNPLNAY 315

Query: 217 -------EFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHS----------PFPVEK 259
                  + TA E+D ++QE+FG  F   M E LD  LF P+HS           +PV  
Sbjct: 316 DEEDSLAKLTAAEVDPSLQEDFG-FFQDQMLEQLDYQLFSPVHSQWHMGLESYVSYPV-T 373

Query: 260 GSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSE 319
           G+ S  H+  N+  T        +E D  +TEFL+S+L                      
Sbjct: 374 GNFSNGHNGENEYGT--------NEPDPDVTEFLESVL---------------------- 403

Query: 320 TPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTS 379
                   K++GSCSESD  V+Q + + +  +S    DNI   +  +M      F+T T 
Sbjct: 404 --------KENGSCSESDT-VSQTQLDVEFDASAVIIDNIKTEALQEMETNISAFKTTTG 454

Query: 380 QNSDNEPSIN--FRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVG 437
            NS  E S N  F ++ + D            D FS  ST  Q  + F  F +S+++   
Sbjct: 455 -NSAVEYSGNMGFSHNNFGD------------DAFSVGSTVNQLDNLFNRFEESSSYTNA 501

Query: 438 VASRNIVATGIRTRMRNPQSLPYREGFVNV-KQGDAPRRLRLQCKLQVGPVRLQSCMPEE 496
           V S +I    I+ R R PQ    +    N   QG A RR+RLQ KL+V      +C    
Sbjct: 502 VGSSDITGPVIKRRTRQPQ---IQSDANNCGPQGTARRRIRLQTKLEV----RHACSMSR 554

Query: 497 DESKPIVAEGVADAEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDE-------- 548
           D           + ++E  V  A+      + D+   ++EN  I  ++   E        
Sbjct: 555 D----------LNCKEEAEVGQAS------QSDTSGTTDENQKIEVKKVDQELKMSMSLL 598

Query: 549 RTKGRLKSTVLMDKDTSNTFRAGHSNRSFAVLFRAAAVVVMFAILVSTWRC 599
           R + + K   +  K       A H   S   L R   +V +F I + TW C
Sbjct: 599 RFRSKYKVPSVFSKVPVPP--ACHLIASSVSLLRVVGLVGLFVIFIGTWIC 647

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398999|gb|ADL36794.1| NAC domain class transcription factor [Malus x domestica]

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 256/626 (40%), Positives = 321/626 (51%), Gaps = 136/626 (21%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           M VLS+NSLPLGFRFRPTD EL+D+YLR KING++ +V+VI EIDVCKREPWDLPDLSVI
Sbjct: 1   MEVLSMNSLPLGFRFRPTDAELIDYYLRSKINGNHRQVAVIREIDVCKREPWDLPDLSVI 60

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           +T D EWFFFCPQDRKYPNGHRLNRAT  GYWKATGKDR+IKS   LIGMKKTLVFH+GR
Sbjct: 61  QTTDPEWFFFCPQDRKYPNGHRLNRATIRGYWKATGKDRQIKSDKILIGMKKTLVFHIGR 120

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPS----- 173
           APKGKRTNWVMHEYRAT  +LDGT PGQS+FVLCRLFKKQDE++E     E EP+     
Sbjct: 121 APKGKRTNWVMHEYRATQKELDGTNPGQSSFVLCRLFKKQDETIEDSNFDEAEPTASSSI 180

Query: 174 --ESSPTSARSEFALDQTLLDCKPSVSHLAEKVTSNLQEC------------------QT 213
              SSP   +S+ A   T     PS     EK  + + EC                   T
Sbjct: 181 AVVSSPQDVQSDLAPVPT----SPSFERQDEKPLTKV-ECTSADTGNAMGSDTLPPLPTT 235

Query: 214 KSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLT 273
           K    +    D   Q N       +  +P    LF PLHS    E G     +  RND +
Sbjct: 236 KFPSNSCDGYDAECQLNMPLGELDMFYDPPQEPLFSPLHSQMHAELG-----YYGRNDFS 290

Query: 274 TIDEKGQLP---SESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDS 330
              +    P   +E DAY+++FL SILN+S E +  ++         +E P    FVK  
Sbjct: 291 NDHQGVTFPYGTNEQDAYVSDFLSSILNSSGEQIDVDA-------IAAEVP----FVK-- 337

Query: 331 GSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEPSINF 390
                            ++ + +  ++NI R  P  ++ +PED+                
Sbjct: 338 -----------------ELQNDVQPEENIDRNDPSLLISIPEDY---------------- 364

Query: 391 RNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVATGIRT 450
                            +Q   S V++               NH   + +R+   TGIR 
Sbjct: 365 -----------------DQSSRSEVTS---------------NHVNAIINRD-AGTGIRL 391

Query: 451 RMRNPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQ-SCMPEEDESKPIVAEGVAD 509
           R R  Q     E FV   QGDA RR+RL  K++    R+Q S  PE++E KPI  E +++
Sbjct: 392 RARQTQIPTSAENFVT--QGDAKRRIRLATKVR----RIQCSSRPEDNEPKPIAMEEMSN 445

Query: 510 AEKELPVNAATGAMYELKGDSQLASNENSNISEEQTTDER--TKGRLKSTVLMDKDTSNT 567
            EK+ P+ A    +  +  D  L            TTD    T  RL S +L  K  S  
Sbjct: 446 NEKK-PIGAVDTNV--ISADIDLPEKGTVPKRPNFTTDGSIITGKRLLSVLL--KAVSP- 499

Query: 568 FRAGHSNRSFAVLFRAAAVVVMFAIL 593
             AGHS  S A LF    V  +F IL
Sbjct: 500 --AGHSMWSLAFLFIGVVVAFLFIIL 523

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134993|ref|XP_002321956.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222868952|gb|EEF06083.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 203/372 (54%), Positives = 247/372 (66%), Gaps = 19/372 (5%)

Query: 1   MAVLSLN--SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLS 58
           MAVLS+N  SLPLGFRFRP+D+ELVD+YLR+KING +D V VI EIDVCK EPWDLPDLS
Sbjct: 1   MAVLSMNFNSLPLGFRFRPSDKELVDYYLRLKINGDDDGVKVIREIDVCKWEPWDLPDLS 60

Query: 59  VIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHM 118
           +IK KD EWFFFCP DRKYPNG R NRAT AGYWKATG DRKIKSGN+LIGMKKTLVF+ 
Sbjct: 61  IIKNKDPEWFFFCPLDRKYPNGSRQNRATNAGYWKATGNDRKIKSGNNLIGMKKTLVFYT 120

Query: 119 GRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEI--CVEVEPSESS 176
           GRAPKGKRTNWVMHEYRAT ++LDGTKPGQS+FVL RLFKKQDES+E   C E E + SS
Sbjct: 121 GRAPKGKRTNWVMHEYRATEEELDGTKPGQSSFVLSRLFKKQDESIESLNCDEAEATVSS 180

Query: 177 PTSARSEFAL---DQTLLDCKPS-----VSHLAEKVTSNLQECQ--TKSSEFTATEIDQA 226
           PT  +S   +   DQ L++  P+     V    E  ++N   C    +S    A+E D  
Sbjct: 181 PTMVQSSPEVTQSDQPLIEASPANTTSEVGAPVEFQSNNFGVCDGGGQSVGLGASEGDLP 240

Query: 227 MQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQL---PS 283
           ++E   + F     EPLD  +F PLH       GSSS  +   N+L+  +   Q     +
Sbjct: 241 VEEAL-NWFIDSPPEPLDYKIFSPLHVQVQSAMGSSSMFYPGNNELSASNTGLQFNNGAN 299

Query: 284 ESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQA 343
           E+DA  ++F+DSIL    E    ES  Q  S    E+  ++ FVKDSGS S SD ++A  
Sbjct: 300 ETDADTSDFVDSILQQPVEFSHGESSIQNISTIPHESLKSVVFVKDSGSYSGSDVDLATI 359

Query: 344 RPNPDI-TSSLC 354
           R + +  T+S C
Sbjct: 360 RVSGNYHTASAC 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147837829|emb|CAN73792.1| hypothetical protein VITISV_034893 [Vitis vinifera]

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 233/528 (44%), Positives = 286/528 (54%), Gaps = 101/528 (19%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           MAVLS NSLPLGFRFRPTDEEL+  YLR+KI+G+++EV VI EIDVCK EPWDLPDLS I
Sbjct: 76  MAVLSFNSLPLGFRFRPTDEELITHYLRLKISGNDEEVRVIREIDVCKWEPWDLPDLSEI 135

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           +T D EWFFFCP+DRKYPNGHRLNRATAAGYWKATG+DR+IKS   L+GMKKTLVFH GR
Sbjct: 136 RTNDMEWFFFCPRDRKYPNGHRLNRATAAGYWKATGRDRQIKSKTRLVGMKKTLVFHTGR 195

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEICV--EVEPSESSPT 178
           AP GKRT WVMHEYRAT  +LDGT PGQ+AFVLCRLFKKQDE  E     E+EP+  SPT
Sbjct: 196 APHGKRTVWVMHEYRATAKELDGTHPGQAAFVLCRLFKKQDEKAEGSNPDEIEPTVPSPT 255

Query: 179 SARS--EFALDQTLLDCKPSVSHLAEK-------VTSNLQECQTKSS------------- 216
            A S  E   +  L    P      E+          N  E   +SS             
Sbjct: 256 PANSPEETEFEVALPQVAPVEKQEEEQPGFAEGCPGENPDEMTAESSVPVGFCSNPLNAY 315

Query: 217 -------EFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHS----------PFPVEK 259
                  + TA E+D ++QE+FG      M E LD  LF P+HS           +PV  
Sbjct: 316 DEEDXLAKLTAAEVDPSLQEDFG-FXQDQMLEQLDYQLFSPVHSQWHMGLESYVSYPV-T 373

Query: 260 GSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSE 319
           G+ S  H+  N+  T         E D  +TEFL+S+L                      
Sbjct: 374 GNFSNGHNGENEYGT--------XEXDPDVTEFLESVL---------------------- 403

Query: 320 TPSNMTFVKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTS 379
                   K++GSCSESD  V+Q + + +  +S    DNI   +  +M      F T T 
Sbjct: 404 --------KENGSCSESDT-VSQTQLDVEFDASAVIIDNIKTEALQEMETNISAFXTTTG 454

Query: 380 QNSDNEPSIN--FRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVG 437
            NS  E S N  F ++ + D            D FS  ST  Q  +    F +S+++   
Sbjct: 455 -NSAVEYSGNMGFSHNNFGD------------DAFSVGSTVNQLDNLXNRFEESSSYTNA 501

Query: 438 VASRNIVATGIRTRMRNPQSLPYREGFVNV-KQGDAPRRLRLQCKLQV 484
           V S +I    I+ R R PQ    +    N   QG A RR+RLQ KL+V
Sbjct: 502 VGSSDITGPVIKRRTRQPQ---IQSDANNCGPQGTARRRIRLQTKLEV 546

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118488|ref|XP_002317831.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222858504|gb|EEE96051.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 181/315 (57%), Positives = 224/315 (71%), Gaps = 19/315 (6%)

Query: 1   MAV--LSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLS 58
           MAV  L+LNSLPLGFRFRP+DEELV++YLR KING +D+V VI EIDVCK EPWDLP LS
Sbjct: 1   MAVFSLNLNSLPLGFRFRPSDEELVNYYLRHKINGKDDKVRVIREIDVCKWEPWDLPGLS 60

Query: 59  VIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHM 118
           +I+ KD EWFFFCP DRKYPNG R NRAT AGYWKATGKDRKIKSGN LIGMKKTLVF+ 
Sbjct: 61  IIENKDPEWFFFCPLDRKYPNGSRQNRATNAGYWKATGKDRKIKSGNRLIGMKKTLVFYT 120

Query: 119 GRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEI--CVEVEPSESS 176
           GRAPKGKRTNWV+HEYRAT ++LDGTKPGQSAFVLCRLFKKQDES+E   C E E + SS
Sbjct: 121 GRAPKGKRTNWVVHEYRATEEELDGTKPGQSAFVLCRLFKKQDESIESPNCDEAEATISS 180

Query: 177 PTSARSEFAL---DQTLLDCKPSVSHLAEKV--------TSNLQECQTKSSEFTATEIDQ 225
           PT+A+S   +   DQ L +  P+ +  +E V        +  + E   ++++  A+E + 
Sbjct: 181 PTTAQSSPEVTQSDQPLTEASPANTTTSEVVAPVEFPSCSVGVSEGGDQTADLPASEEEL 240

Query: 226 AMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQ---LP 282
            ++E    +F     + LD  LFPP+H       GSSS  +   NDL++ +   Q   + 
Sbjct: 241 QLEEALNWLFDS-PPQALDYELFPPVHEQVQEAVGSSSMFNHGNNDLSSSNRGLQSHNVG 299

Query: 283 SESDAYITEFLDSIL 297
           +E+D Y +EF+DSIL
Sbjct: 300 NETDDYTSEFIDSIL 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506164|gb|AFK41148.1| unknown [Medicago truncatula]

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 218/512 (42%), Positives = 270/512 (52%), Gaps = 102/512 (19%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
           +AVLSLN LPLGFRFRPTDEELVDFYLRMKING+ DEV VI E+DVCK EPWDLPDLS++
Sbjct: 17  LAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIV 76

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
           + KD EWFFFCP DRKYPNG RLNRAT  GYWKATGKDRKIKSG  LIGMKKTLVF+ GR
Sbjct: 77  RNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRKIKSGATLIGMKKTLVFYAGR 136

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDESVEI--CVEVEPSESSPT 178
           APKG+RT+W+MHEYR T  +LDGT PGQ+ +VLCRLFKKQDES+    C E E + S+PT
Sbjct: 137 APKGQRTHWIMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLASSNCGEAEQTTSTPT 196

Query: 179 SAR---SEFALDQTLLDCKPSVS-----HLA------EKVTS-------------NLQEC 211
           +A     E   D  L+    S++     HLA      E+  S             N  + 
Sbjct: 197 TANYSPEEIQSDLNLVPLSSSLATEDERHLAAIPENSEEAMSHVITTADCYSDACNASDA 256

Query: 212 QTKSSEFTATEIDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRND 271
           Q +S E  A E DQ +  +  D   +   EP D  LF P H+ FP E G     H   N+
Sbjct: 257 QHQSLEVPAAEEDQLLNLDIFDS-PRFELEPWDDKLFSPAHAHFPPEFG-----HQANNE 310

Query: 272 LTTIDEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSF-----FVSETPSNMTF 326
           L      G         +++F DS +N             W+ F        E   N+  
Sbjct: 311 LIQYGTNG-------TDVSDFFDSCVN-------------WDEFSSEASISLELSPNIFK 350

Query: 327 VKDSGSCSESDAEVAQARPNPDITSSLCFKDNIARASPLKMLRMPEDFRTVTSQNSDNEP 386
           + ++GSCS SD E+A      ++ + L   D             PE    VT QNSD   
Sbjct: 351 IPENGSCSNSDVEMA------NMMNLLASHD------------YPEG---VTLQNSDVGL 389

Query: 387 SINFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHDAFGGFGDSNNHAVGVASRNIVAT 446
             N       +DF    + +   + +  +  +    D  GG G                 
Sbjct: 390 FQNNSQMTLSNDFSMGQMPTVVNE-YEQMWNSDTVVD--GGTG----------------I 430

Query: 447 GIRTRMRNPQSLPYREGFVNVKQGDAPRRLRL 478
           GIR+R R  +     +  V   QG APRR+RL
Sbjct: 431 GIRSRQRQNEQPDMNQ--VMQAQGSAPRRIRL 460

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	604
TAIR|locus:2114678	469	NAC062 "NAC domain containing	0.624	0.803	0.432	1.1e-73
TAIR|locus:2153899	451	TIP "TCV-interacting protein"	0.493	0.660	0.482	1.4e-72
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.534	0.604	0.458	7.2e-68
TAIR|locus:2037920	652	NAC014 "NAC 014" [Arabidopsis	0.961	0.891	0.325	2.8e-66
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.251	0.240	0.618	2e-53
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.251	0.317	0.594	2.6e-51
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.256	0.282	0.6	8.7e-51
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.256	0.273	0.567	9.8e-50
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.251	0.319	0.601	2.3e-48
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.25	0.613	0.589	4.7e-48

TAIR|locus:2114678 NAC062 "NAC domain containing protein 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 170/393 (43%), Positives = 225/393 (57%)

Query:     3 VLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKT 62
             VLS++SLP+G RFRPTDEEL+ +YLR KINGH+D+V  I EID+CK EPWDLPD SVIKT
Sbjct:     7 VLSMDSLPVGLRFRPTDEELIRYYLRRKINGHDDDVKAIREIDICKWEPWDLPDFSVIKT 66

Query:    63 KDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGN-HLIGMKKTLVFHMGRA 121
             KD EW +FCP DRKYP+G R NRAT AGYWKATGKDRKIKSG  ++IG+K+TLVFH GRA
Sbjct:    67 KDSEWLYFCPLDRKYPSGSRQNRATVAGYWKATGKDRKIKSGKTNIIGVKRTLVFHAGRA 126

Query:   122 PKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDXXXXXXXXXXXXXXXXXXAR 181
             P+G RTNW++HEYRAT DDL GT PGQS FV+C+LFKK++                  A 
Sbjct:   127 PRGTRTNWIIHEYRATEDDLSGTNPGQSPFVICKLFKKEELVLGEEDSKSDEVEEP--AV 184

Query:   182 SEFALDQTLLDCKPSVSHLAEKVTSNLQECQTKSSEFTATEIDQAMQENFGDVFTKVMSE 241
             S   ++ T  +    +     K     +     S +  +   D+A      D       E
Sbjct:   185 SSPTVEVTKSEVSEVIKTEDVKRHDIAESSLVISGDSHSDACDEATTAELVDFKWYPELE 244

Query:   242 PLDCTLFPPLHSPFPVEKGSS------STSHSVRNDLTTIDEKGQL-PSESDAYITEFLD 294
              LD TLF PLHS    E GSS       +S+   N+  +   + Q   +E D YI++FLD
Sbjct:   245 SLDFTLFSPLHSQVQSELGSSYNTFQPGSSNFSGNNNNSFQIQTQYGTNEVDTYISDFLD 304

Query:   295 SILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVA----QARPNPDIT 350
             SIL + DE+  ++      S F    P  +  V   GS  +   +V+    Q +      
Sbjct:   305 SILKSPDEDP-EKHKYVLQSGFDVVAPDQIAQVCQQGSAVDMSNDVSVTGIQIKSRQAQP 363

Query:   351 SSLCFKDNIARASPLKMLRMPEDFRTVTSQNSD 383
             S     D IA+ +  + LR+  +F  + ++N +
Sbjct:   364 SGYT-NDYIAQGNGPRRLRLQSNFNGINTKNPE 395

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0070417 "cellular response to cold" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2153899 TIP "TCV-interacting protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 683 (245.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
 Identities = 149/309 (48%), Positives = 187/309 (60%)

Query:     1 MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
             M VLSL SLP+GFRF PTDEELV +YLR+KINGH+++V VI EID+CK EPWDLPD SV+
Sbjct:     5 MEVLSLASLPVGFRFSPTDEELVRYYLRLKINGHDNDVRVIREIDICKWEPWDLPDFSVV 64

Query:    61 KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGN-HLIGMKKTLVFHMG 119
             KT D EW FFCP DRKYP+G R+NRAT AGYWKATGKDRKIKSG   +IG+K+TLVF+ G
Sbjct:    65 KTTDSEWLFFCPLDRKYPSGSRMNRATVAGYWKATGKDRKIKSGKTKIIGVKRTLVFYTG 124

Query:   120 RAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDXXXXXXXXXXXXXXXXXX 179
             RAPKG RT W+MHEYRAT  DLDGTK GQ+ FV+C+LFKKQD                  
Sbjct:   125 RAPKGTRTCWIMHEYRATEKDLDGTKSGQNPFVVCKLFKKQDIVNGAAEPEESKSCEVEP 184

Query:   180 A-RSEFALDQT-LLDCKPSVSHLAEKVTSNLQECQTK-SSEF-TATEIDQAMQENFGDVF 235
             A  S   +D+  + +  P      E    ++ E      SE  +   + +       D+ 
Sbjct:   185 AVSSPTVVDEVEMSEVSPVFPKTEETNPCDVAESSLVIPSECRSGYSVPEVTTTGLDDID 244

Query:   236 TKVMSEPLDCTLFPPLHSPFPVEKGSS------STSHSVRNDLTTIDEKGQLPSESDAYI 289
                  E     LF PLHS    E GSS       +S   +N      +     +++D Y+
Sbjct:   245 WLSFMEFDSPKLFSPLHSQVQSELGSSFNGLQSESSELFKNHNEDYIQTQYGTNDADEYM 304

Query:   290 TEFLDSILN 298
             ++FLDS L+
Sbjct:   305 SKFLDSFLD 313

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0051607 "defense response to virus" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 164/358 (45%), Positives = 203/358 (56%)

Query:     1 MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
             M  +S+ SLPLGFRFRPTDEELV+ YLR+KING + +V VI +IDVCK EPWDLP LSVI
Sbjct:     1 MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI 60

Query:    61 KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
             KT D EWFFFCP+DRKYPNGHR NRAT +GYWKATGKDR IKS   LIGMKKTLVF+ GR
Sbjct:    61 KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGR 120

Query:   121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDXXXXXXXXXXXXXXXXXXA 180
             APKG+RTNW+MHEYR T  DLDGT PGQS +VLCRLF K D                  A
Sbjct:   121 APKGERTNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAFT----A 176

Query:   181 RSEFALDQTLLDC---KPSVSHLAEKVTSNLQECQTKSSEFTAT-EIDQAMQENFGDVFT 236
              ++++ D T  D     PS     EK +     C    S  TA   + +A +EN      
Sbjct:   177 SNKYSPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTADGTMIEAPEENLW---- 232

Query:   237 KVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLPSESDAYITEFLDSI 296
                   L C L     +P P      +   S  +++    + G   SE D  +TE L+ +
Sbjct:   233 ------LSCDL-EDQKAPLPCMDSIYAGDFSY-DEIGFQFQDGT--SEPDVSLTELLEEV 282

Query:   297 LNTSDENLFDESDCQWN------------SFFVSETPSNMTFVKDSGSCSESDAEVAQ 342
              N  D+   +ES  + N                S  P +  F  D  + +++DAE+AQ
Sbjct:   283 FNNPDDFSCEESISRENPAVSPNGIFSSAKMLQSAAPED-AFFNDFMAFTDTDAEMAQ 339

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2037920 NAC014 "NAC 014" [Arabidopsis thaliana (taxid:3702)]

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 205/630 (32%), Positives = 295/630 (46%)

Query:     2 AVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIK 61
             A+LS+ +LPLGFRFRPTDEEL++ YLR+KING + EV VI EIDVCK EPWDLP LSVIK
Sbjct:    17 ALLSMEALPLGFRFRPTDEELINHYLRLKINGRDLEVRVIPEIDVCKWEPWDLPGLSVIK 76

Query:    62 TKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRA 121
             T D+EWFFFCP+DRKYP+GHR NRAT  GYWKATGKDR IKS   +IGMKKTLVF+ GRA
Sbjct:    77 TDDQEWFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIKSKKMIIGMKKTLVFYRGRA 136

Query:   122 PKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK-QDXXXXXXXXXXXXXXXXXXA 180
             P+G+RTNW+MHEYRAT  +LDGT PGQ+ +VLCRLF K  D                   
Sbjct:   137 PRGERTNWIMHEYRATDKELDGTGPGQNPYVLCRLFHKPSDSCDPAHCEEIEKVNFTPTT 196

Query:   181 RSEFALDQT----LLDCKPSVSHLAEKVTSNLQECQT--------------KSSEFTATE 222
              +  + D T    + +   S  H  ++ + + + C +               ++     E
Sbjct:   197 TTRCSPDDTSSEMVQETATSGVHALDR-SDDTERCLSDKGNNDVKPDVSVINNTSVNHAE 255

Query:   223 IDQAMQENFGDVFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTTIDEKGQLP 282
               +A   N G   T V   PL   + P LH P   EK       S+    + +D      
Sbjct:   256 TSRAKDRNLGK--TLVEENPLLRDV-PTLHGPILSEKSYYPGQSSIGFATSHMDSMYSSD 312

Query:   283 SESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQ 342
               +  Y   F D   +  D +L D  D  +++   S       FV  +      +  +  
Sbjct:   313 FGNCDYGLHFQDGA-SEQDASLTDVLDEVFHNHNESSN-DRKDFVLPNMMHWPGNTRLLS 370

Query:   343 ARPNPDITSSLCFKDNIARASPLKMLRMPEDF--RTVTSQNSDNEPSINFRNSCYLDDFC 400
                 P +  S+ F D  A  S  +   +P+    R V+ QN D++ ++   +S       
Sbjct:   371 TE-YPFLKDSVAFVDGSAEVSGSQQF-VPDILASRWVSEQNVDSKEAVEILSSTG----S 424

Query:   401 NADVESCEQDVFSSVSTTGQFH-DAFG---GFGDSNNHAVGVASRNIVATGI---RTRMR 453
             +  +     +VF   +++     D F       + ++       RNI  + I   + R R
Sbjct:   425 SRTLTPLHNNVFGQYASSSYAAIDPFNYNVNQPEQSSFEQSHVDRNISPSNIFEFKARSR 484

Query:   454 NPQSLPYREGFVNVKQGDAPRRLRLQCKLQVGPVRLQSCMPEED-ESKPIVAEGVADAEK 512
               Q    R+    V QG APRR+RLQ +  + PV  +     ++ E +  V   ++   +
Sbjct:   485 ENQ----RDLDSVVDQGTAPRRIRLQIEQPLTPVTNKKERDADNYEEEDEVQSAMSKVVE 540

Query:   513 ELPVN-AATG-AMYELKGDSQLASN--ENSNISEEQTTDERTKGRLKSTVLMDKDTSNTF 568
             E P N +A G A   ++  ++L       +N        E      K  +   +D S++ 
Sbjct:   541 EEPANLSAQGTAQRRIRLQTRLRKPLITLNNTKRNSNGREGEASHRKCEMQEKEDISSSS 600

Query:   569 RAGHSNRSXXXXXXXXXXXXXXXILVSTWR 598
                   +S               +LV  W+
Sbjct:   601 SWQKQKKSLVQFSSVVIIVAVIVVLVEIWK 630

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
 Identities = 94/152 (61%), Positives = 114/152 (75%)

Query:     8 SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
             S+P GFRF PTDEELV +YL+ KING   E+ +I EID+ K EPWDLP  S++ +KD EW
Sbjct:     5 SMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEW 64

Query:    68 FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
             FFF P+DRKYPNG R NRAT AGYWKATGKDRK+ S + ++G KKTLV++ GRAP G RT
Sbjct:    65 FFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHGSRT 124

Query:   128 NWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
             +WVMHEYR    + D     Q A+ LCR+FKK
Sbjct:   125 DWVMHEYRLEEQECDSKSGIQDAYALCRVFKK 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
 Identities = 91/153 (59%), Positives = 114/153 (74%)

Query:     8 SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
             SLP GFRF PTDEEL+ +YL+ KING   E+ VI+E+D+ K EPWDLP  S++ +KD+EW
Sbjct:     5 SLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEW 64

Query:    68 FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
             +FF P+DRKYPNG R NRAT  GYWKATGKDR++   +  IG KKTLV++ GRAP G RT
Sbjct:    65 YFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPHGIRT 124

Query:   128 NWVMHEYRATTDDLDGTKPG-QSAFVLCRLFKK 159
              WVMHEYR    + + +  G Q A+ LCR+FKK
Sbjct:   125 GWVMHEYRLDETECEPSAYGMQDAYALCRVFKK 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 499 (180.7 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
 Identities = 93/155 (60%), Positives = 113/155 (72%)

Query:     5 SLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKD 64
             S+ SL  GFRF PTDEELV +YL+ KI     +   IS  DV K EPWDLPD S +K++D
Sbjct:     5 SVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSRLKSRD 64

Query:    65 REWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKG 124
              EW+FF   D+KY NG + NRAT  GYWK TGKDR+I +G+ ++GMKKTLV+H GRAP+G
Sbjct:    65 LEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKGRAPRG 124

Query:   125 KRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
             +RTNWVMHEYR    DLD T   Q AFVLCR+F+K
Sbjct:   125 ERTNWVMHEYRLVDQDLDKTGVHQDAFVLCRIFQK 159

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
 Identities = 88/155 (56%), Positives = 114/155 (73%)

Query:     5 SLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKD 64
             S+ SL  GFRF PTDEELV +YL+ K+     +   IS  D+ K EPWDLPD S +K++D
Sbjct:     5 SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRD 64

Query:    65 REWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKG 124
              EW+FF   D+KY NG + NRAT  GYWK TGKDR+I++G+ ++GMKKTLV+H GRAP+G
Sbjct:    65 LEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRG 124

Query:   125 KRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
             +RTNWVMHEYR + +DL      Q A+VLCR+F+K
Sbjct:   125 ERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQK 159

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 92/153 (60%), Positives = 113/153 (73%)

Query:     8 SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
             SLP GFRF PTDEEL+ +YL+ KING   E+ +I E+D+ K EPWDLP  S+I +KD+EW
Sbjct:     5 SLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEW 64

Query:    68 FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
             FFF P+DRKYPNG R NRAT  GYWKATGKDR++   +  IG KKTLV++ GRAP G RT
Sbjct:    65 FFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPHGIRT 124

Query:   128 NWVMHEYRATTDDLDGTKPG-QSAFVLCRLFKK 159
              WVMHEYR    + + +  G Q A+ LCR+FKK
Sbjct:   125 GWVMHEYRLDESECEPSAFGMQDAYALCRVFKK 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 89/151 (58%), Positives = 113/151 (74%)

Query:     9 LPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWF 68
             LP GFRF PTDEELV++YL+ KING   E+ +I E+D+ K EPWDL + S + ++D EW+
Sbjct:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWY 65

Query:    69 FFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTN 128
             FF P+DRKYPNG R NRAT  GYWK+TGKDR++ S +  IGMKKTLV++ GRAP+G RT+
Sbjct:    66 FFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQGIRTD 125

Query:   129 WVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
             WVMHEYR    D D     Q ++ LCR+FKK
Sbjct:   126 WVMHEYRLDDKDCDDPSSLQDSYALCRVFKK 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037151001 SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (264 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	604
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-77

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  241 bits (618), Expect = 1e-77
 Identities = 82/131 (62%), Positives = 99/131 (75%), Gaps = 3/131 (2%)

Query: 9   LPLGFRFRPTDEELVDFYLRMKINGH-NDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           LP GFRF PTDEELV +YL+ K+ G     + VI E+D+ K EPWDLPD    K  DREW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKS-GNHLIGMKKTLVFHMGRAPKGKR 126
           +FF P+DRKYPNG R NRAT +GYWKATGKD+ + S G  ++GMKKTLVF+ GRAPKG++
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 127 TNWVMHEYRAT 137
           T+WVMHEYR  
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	604
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=6.7e-41  Score=304.78  Aligned_cols=127  Identities=56%  Similarity=1.086  Sum_probs=97.2

Q ss_pred             CCCCceeCCChHHHHHHHHHHHHcCCCCCC-CceeeccCCCCCCCCCCcccccccCCceEEEeeccCCCCCCCCCccccc
Q 007432            9 LPLGFRFRPTDEELVDFYLRMKINGHNDEV-SVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRAT   87 (604)
Q Consensus         9 LPpGFRF~PTDEELI~~YLr~KI~G~plp~-~~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~rKypnGsR~nRat   87 (604)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||.+|||+||..  .+.++.+||||+++++++++|.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~--~~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAK--FKGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHH--SSS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhh--ccCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 8999999999999999942  2346679999999999999999999999


Q ss_pred             ccceeeeeCCceeeec-CceeeeeEEEEEEeeCCCCCCCCcCeEEEEEEeC
Q 007432           88 AAGYWKATGKDRKIKS-GNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRAT  137 (604)
Q Consensus        88 g~GyWKatGk~k~I~s-gg~vVG~KKtLvFy~Grapkg~KT~WvMhEYrL~  137 (604)
                      ++|+||++|+.++|.. ++.+||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999987 8899999999999999889999999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	604
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-41
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-41
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-39

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  166 bits (421), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           SLP GFRF PTDEEL+  YL  K  G++  + +I+EID+ K +PW LP+ ++   K  EW
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK--EW 73
Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF++G+APKG +T
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 128 NWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQ 160
           NW+MHEYR               +VLCR++KKQ
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  166 bits (421), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           SLP GFRF PTDEEL+  YL  K  G++  + +I+EID+ K +PW LP+ ++   K  EW
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK--EW 76
Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF++G+APKG +T
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 128 NWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQ 160
           NW+MHEYR               +VLCR++KKQ
Sbjct: 137 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 169

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  160 bits (404), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/159 (46%), Positives = 103/159 (64%), Gaps = 7/159 (4%)
Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           +LP GFRF PTD+ELV+ YL  K  G    V +I+E+D+ K +PWDLP+ ++     REW
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGA--REW 71
Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NRA   GYWKATG D+ +      +G+KK LVF+ G+AP+G +T
Sbjct: 72  YFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKT 131
Query: 128 NWVMHEYRATTDDLDGTKPGQSA-----FVLCRLFKKQD 161
           +W+MHEYR            + +     +VLCRL+ K++
Sbjct: 132 DWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN 170

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	604
1ut7_A	171	No apical meristem protein; transcription regulati	1e-95
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-92
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  289 bits (742), Expect = 1e-95
 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 2/159 (1%)

Query: 1   MAVLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVI 60
              L+  SLP GFRF PTDEEL+  YL  K  G++  + +I+EID+ K +PW LP+ ++ 
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 61  KTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGR 120
              ++EW+FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF++G+
Sbjct: 69  G--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGK 126

Query: 121 APKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKK 159
           APKG +TNW+MHEYR               +VLCR++KK
Sbjct: 127 APKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  280 bits (719), Expect = 2e-92
 Identities = 75/160 (46%), Positives = 104/160 (65%), Gaps = 7/160 (4%)

Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           +LP GFRF PTD+ELV+ YL  K  G    V +I+E+D+ K +PWDLP+ ++     REW
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG--AREW 71

Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NRA   GYWKATG D+ +      +G+KK LVF+ G+AP+G +T
Sbjct: 72  YFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKT 131

Query: 128 NWVMHEYRATTDDLDGTKPGQSA-----FVLCRLFKKQDE 162
           +W+MHEYR            + +     +VLCRL+ K++E
Sbjct: 132 DWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 5e-05
 Identities = 58/442 (13%), Positives = 119/442 (26%), Gaps = 119/442 (26%)

Query: 221 TEIDQAMQENFGD---VFTKVMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDLTT--I 275
            E  +  Q  + D   VF     +  DC                       ++ L+   I
Sbjct: 9   FETGE-HQYQYKDILSVFEDAFVDNFDC----------------KDVQDMPKSILSKEEI 51

Query: 276 DEKGQLPSESDAYITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSE 335
           D             T  L   L +  E +  +       F       N  F+       +
Sbjct: 52  DHIIMSKDAVSG--TLRLFWTLLSKQEEMVQK-------FVEEVLRINYKFLMSPIKTEQ 102

Query: 336 SDAEVAQAR----PNPDITSSLCF-KDNIARASPLKMLRM------PEDFRTV------- 377
               +         +     +  F K N++R  P   LR       P     +       
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 378 -------TSQNSDNEPS-------INFRNSCYLDDFCNADVESCEQDVFSSVSTTGQFHD 423
                     +   +         +N +N       CN       + V   +      + 
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKN-------CN-----SPETVLEMLQKL--LYQ 208

Query: 424 AFGGFGDSNNHAVGVASR-NIVATGIRTRMRNPQSLPYREGFV---NVKQGDAPRRLRLQ 479
               +   ++H+  +  R + +   +R  +++    PY    +   NV+   A     L 
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK---PYENCLLVLLNVQNAKAWNAFNLS 265

Query: 480 CKL----------------QVGPVRLQSCMP--EEDESKPIVAEGVADAEKELPVNAATG 521
           CK+                    + L         DE K ++ + +    ++LP    T 
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 522 AMYELKGDSQLASN--ENSNISE--EQTTDERTKGRLKSTV--LMDKDTSNTFRAGHSNR 575
               L   S +A +  +     +  +    ++    ++S++  L   +    F       
Sbjct: 326 NPRRL---SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF------D 376

Query: 576 SFAVLFRAAAVVVMFAILVSTW 597
             +V F   +  +   +L   W
Sbjct: 377 RLSV-FP-PSAHIPTILLSLIW 396

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 1e-04
 Identities = 63/389 (16%), Positives = 108/389 (27%), Gaps = 132/389 (33%)

Query: 183 EFALDQTLLDCKPSVSHLAEKVTSNLQECQ-----TKSSEFTATEIDQAMQENFGDVFTK 237
           +F   +     K  +S   +    N  +C+      KS   +  EID  +     D  + 
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNF-DCKDVQDMPKSI-LSKEEIDHIIMS--KDAVSG 63

Query: 238 VMSEPLDCTLFPPLHSPFPVEKGSSSTSHSVRNDL--------TTIDEKGQLPS-ESDAY 288
            +       LF  L     + K        V   L        + I  + + PS  +  Y
Sbjct: 64  TL------RLFWTL-----LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112

Query: 289 ITEFLDSILNTSDENLFDESDCQWNSFFVSETPSNMTFVKDSGSCSESDAEVAQARPNPD 348
           I E  D + N  D  +F +       + VS        ++ +         + + RP  +
Sbjct: 113 I-EQRDRLYN--DNQVFAK-------YNVSR-LQPYLKLRQA---------LLELRPAKN 152

Query: 349 IT---------SSL------------CFKDNIA------RASPLKMLRMPEDFRTVTSQN 381
           +          + +                 I         SP  +L M +        N
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 382 ----SDNEPSINFR-----------------NSCY--LDDFCNADV-----ESC------ 407
               SD+  +I  R                  +C   L +  NA        SC      
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 408 -EQDVFSSVSTTGQFH----DAFGGFGDSNNHAVGVASRNIVATGIRTRMRNPQSLPYRE 462
             + V   +S     H                      ++++   +  R   PQ LP RE
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDE-------VKSLLLKYLDCR---PQDLP-RE 321

Query: 463 GFVNVKQGDAPRRLRL-QCKLQVGPVRLQ 490
               V   + PRRL +    ++ G     
Sbjct: 322 ----VLTTN-PRRLSIIAESIRDGLATWD 345

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	604
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.8e-53  Score=406.56  Aligned_cols=155  Identities=48%  Similarity=0.948  Sum_probs=134.6

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHHHcCCCCCCCceeeccCCCCCCCCCCcccccccCCceEEEeeccCCCCCCCCCcc
Q 007432            5 SLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLN   84 (604)
Q Consensus         5 sm~~LPpGFRF~PTDEELI~~YLr~KI~G~plp~~~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~rKypnGsR~n   84 (604)
                      ....|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+.  .++.+|||||++++||++|.|++
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~--~g~~ewYFFs~r~~ky~~g~R~n   88 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERAL--FGAREWYFFTPRDRKYPNGSRPN   88 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCS--SCSSEEEEEEECCC-----CCSC
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhc--cCCceEEEEeccccccCCCCCce
Confidence            3468999999999999999999999999999999999999999999999999763  45689999999999999999999


Q ss_pred             cccccceeeeeCCceeeecCceeeeeEEEEEEeeCCCCCCCCcCeEEEEEEeCCCCCCC--C---CCCCCceEEEEEEee
Q 007432           85 RATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDG--T---KPGQSAFVLCRLFKK  159 (604)
Q Consensus        85 Ratg~GyWKatGk~k~I~sgg~vVG~KKtLvFy~Grapkg~KT~WvMhEYrL~~~~l~~--~---~~~~~d~VLCRIfkK  159 (604)
                      |+|++||||+||++++|..++.+||+||+|+||.|++|++.||+|+||||+|.......  .   ....++|||||||+|
T Consensus        89 R~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           89 RAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             eecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            99999999999999999988899999999999999999999999999999998764321  1   123579999999998


Q ss_pred             CC
Q 007432          160 QD  161 (604)
Q Consensus       160 ~~  161 (604)
                      ++
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3.7e-53  Score=404.72  Aligned_cols=157  Identities=49%  Similarity=0.914  Sum_probs=131.8

Q ss_pred             cCCCCCCCCceeCCChHHHHHHHHHHHHcCCCCCCCceeeccCCCCCCCCCCcccccccCCceEEEeeccCCCCCCCCCc
Q 007432            4 LSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRL   83 (604)
Q Consensus         4 lsm~~LPpGFRF~PTDEELI~~YLr~KI~G~plp~~~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~rKypnGsR~   83 (604)
                      .....|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+  ..++.+|||||++++||++|.|+
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~--~~g~~ewyFFs~r~~k~~~g~R~   89 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSRP   89 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------C
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchh--hcCCccEEEEeccccccCCCCcc
Confidence            3457899999999999999999999999999999999999999999999999975  34678999999999999999999


Q ss_pred             ccccccceeeeeCCceeeecCceeeeeEEEEEEeeCCCCCCCCcCeEEEEEEeCCCCCCCCCCCCCceEEEEEEeeCCC
Q 007432           84 NRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQDE  162 (604)
Q Consensus        84 nRatg~GyWKatGk~k~I~sgg~vVG~KKtLvFy~Grapkg~KT~WvMhEYrL~~~~l~~~~~~~~d~VLCRIfkK~~~  162 (604)
                      +|+|++||||+||++++|..++.+||+||+|+||+|++|++.||+|+||||+|............++|||||||+|+..
T Consensus        90 ~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             cccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999999888999999999999999999999999999999987542111234679999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	604
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-68

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  217 bits (553), Expect = 3e-68
 Identities = 76/153 (49%), Positives = 103/153 (67%), Gaps = 2/153 (1%)

Query: 8   SLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREW 67
           SLP GFRF PTDEEL+  YL  K  G++  + +I+EID+ K +PW LP+ +     ++EW
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA--LFGEKEW 73

Query: 68  FFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRT 127
           +FF P+DRKYPNG R NR   +GYWKATG D+ I +    +G+KK LVF++G+APKG +T
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133

Query: 128 NWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQ 160
           NW+MHEYR               +VLCR++KKQ
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	604
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-50  Score=382.46  Aligned_cols=156  Identities=49%  Similarity=0.914  Sum_probs=131.1

Q ss_pred             ccCCCCCCCCceeCCChHHHHHHHHHHHHcCCCCCCCceeeccCCCCCCCCCCcccccccCCceEEEeeccCCCCCCCCC
Q 007432            3 VLSLNSLPLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHR   82 (604)
Q Consensus         3 ~lsm~~LPpGFRF~PTDEELI~~YLr~KI~G~plp~~~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~rKypnGsR   82 (604)
                      .+.-.+|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+..  ..++++||||+++++++++|.|
T Consensus        11 ~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~--~~~~~~wyFft~~~~k~~~g~r   88 (166)
T d1ut7a_          11 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSR   88 (166)
T ss_dssp             -CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------
T ss_pred             ccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchh--ccCcceEEEEeeeccccCCCCc
Confidence            34456899999999999999999999999999999999999999999999999865  3457899999999999999999


Q ss_pred             cccccccceeeeeCCceeeecCceeeeeEEEEEEeeCCCCCCCCcCeEEEEEEeCCCCCCCCCCCCCceEEEEEEeeC
Q 007432           83 LNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRATTDDLDGTKPGQSAFVLCRLFKKQ  160 (604)
Q Consensus        83 ~nRatg~GyWKatGk~k~I~sgg~vVG~KKtLvFy~Grapkg~KT~WvMhEYrL~~~~l~~~~~~~~d~VLCRIfkK~  160 (604)
                      .+|++++||||++|+++.|.++|.+||+||+|+||+++++++.+|+|+||||+|.+..........++|||||||+|+
T Consensus        89 ~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          89 PNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            999999999999999999999899999999999999999999999999999999876544444556799999999984