Citrus Sinensis ID: 007471

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600--
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
cccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEEccccccccccccccHHHcccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccccccccccccccccccccHHHHHcccEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEccccccccccEEEEccEEcccccccccEEEEc
cHHHHHHHHHHHHHHHHHHHHHHHHccHccccccccccHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHccHHHHcccccHHHHHHHHHHHHHcccccccccccccccccEccHccEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccccccccccccccHEEEHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccEEccccccEEEccccccccccccccEEEEEccccccEEEEEEEEccEEEcccccEEEEEEEcccccccccEEEEEEEcccccccEEEEEEEccccccccccEEEEccEEEEcccccccEEEEc
mkkwmcsiGFFKFLLTFLLIVSAAQAKECtnaypelashTFRSNLLSSKNESYIKQIHshndhltpsddsawlslmprkiLREEEQDELFSWAMLYRKIknpgqfkvpersgeflkevslhdvrlgsdsmHWRAQQTNLEYLLMLDVDKLVWNFRktarlpapgepyggweepscelrghfVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEigsgylsafpteQFDRLEalipvwapyyTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLahlfdkpcfLGLLAlqaddisgfhsnthipivigsqmryevtgDQLHKTISMFFMDIVnsshtyatggtsvgefwsdpkrlasnldsnteescTTYNMLKVSRHLFRWTKEIAYADYYErsltngvlgiqrgtepgvmiyllplapgsskersyhhwgtpsdsfwccygtgiesfsklgdsiyfeeegkypgVYIIQYISSrldwksgqivvnqkvdpvvswdpylrVTLTfsskgsglttslnlriptwtssngakatlngqdlplpspgqntiiis
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTArlpapgepygGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAsnldsnteescTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKvdpvvswdpYLRVTLtfsskgsglttslNLRIPTWTSSNGAKAtlngqdlplpspgqntiiis
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
***WMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFR****************************AWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSD**************SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGS**ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWT***************************
*****CSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRK****************LKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAP*********HWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQF******GEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGQNTIIIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query602
224053368 858 predicted protein [Populus trichocarpa] 0.951 0.667 0.735 0.0
225435510 864 PREDICTED: uncharacterized protein LOC10 0.951 0.663 0.727 0.0
297746357 767 unnamed protein product [Vitis vinifera] 0.951 0.747 0.727 0.0
224075776 858 predicted protein [Populus trichocarpa] 0.941 0.660 0.735 0.0
15239944 861 uncharacterized protein [Arabidopsis tha 0.961 0.672 0.686 0.0
359478753 874 PREDICTED: uncharacterized protein LOC10 0.931 0.641 0.716 0.0
297807305 862 hypothetical protein ARALYDRAFT_909245 [ 0.948 0.662 0.687 0.0
297807309 860 hypothetical protein ARALYDRAFT_350453 [ 0.951 0.666 0.684 0.0
449448754 868 PREDICTED: uncharacterized protein LOC10 0.923 0.640 0.712 0.0
30684197 865 uncharacterized protein [Arabidopsis tha 0.943 0.656 0.689 0.0
>gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/583 (73%), Positives = 501/583 (85%), Gaps = 10/583 (1%)

Query: 14  LLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWL 73
           L+   ++     +KECTN   +L+SHTFR  LLSS+NE++ +++ +H  HLTP+DDSAW 
Sbjct: 7   LVVLSMLCGFGTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHY-HLTPTDDSAWA 65

Query: 74  SLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWR 133
           +L+PRKILREE++   +SWAM+YR +K+P      + SG FLKEVSLH+VRL   S+HW+
Sbjct: 66  NLLPRKILREEDE---YSWAMMYRNLKSP-----LKSSGNFLKEVSLHNVRLDPSSIHWQ 117

Query: 134 AQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMW 193
           AQQTNLEYLLMLDVD LVW+FRKTA L  PG  YGGWE P+CELRGHFVGHYLSASA MW
Sbjct: 118 AQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSASAQMW 177

Query: 194 ASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILA 253
           ASTHN+ L+++MSAVVSALS+CQ+++GSGYLSAFP+E FDR EA+ PVWAPYYTIHKILA
Sbjct: 178 ASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIHKILA 237

Query: 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLF 313
           GLLDQYT+ADNA+AL+M  WMV+YFYNRV+NVI  +S+ERH+Q+LNEE GGMNDVLYKLF
Sbjct: 238 GLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVLYKLF 297

Query: 314 CITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKT 373
            IT DPKHL+LAHLFDKPCFLGLLA+QA+DISGFH+NTHIPIVIG+QMRYE+TGD L+K 
Sbjct: 298 SITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDPLYKD 357

Query: 374 ISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWT 433
           I  FFMDIVNSSH+YATGGTSV EFWSDPKRLAS L +  EESCTTYNMLKVSRHLFRWT
Sbjct: 358 IGTFFMDIVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWT 417

Query: 434 KEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYG 493
           KE+AYADYYER+LTNGVLGIQRGTEPGVMIY+LP  PGSSK +SYH WGT  D+FWCCYG
Sbjct: 418 KEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFWCCYG 477

Query: 494 TGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVT 553
           TGIESFSKLGDSIYFEEEG+ PG+YIIQYISS LDWKSGQI++NQKVDPVVS DPYLRVT
Sbjct: 478 TGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPYLRVT 537

Query: 554 LTFS-SKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPG 595
            TFS +KGS   ++LNLRIP WT  +GA AT+N Q L +P+PG
Sbjct: 538 FTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPG 580

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297746357|emb|CBI16413.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15239944|ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis thaliana] gi|26451123|dbj|BAC42665.1| unknown protein [Arabidopsis thaliana] gi|332004451|gb|AED91834.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297807305|ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata] gi|297317373|gb|EFH47795.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] Back     alignment and taxonomy information
>gi|30684197|ref|NP_196800.2| uncharacterized protein [Arabidopsis thaliana] gi|28393685|gb|AAO42255.1| unknown protein [Arabidopsis thaliana] gi|332004452|gb|AED91835.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query602
TAIR|locus:2182280 861 AT5G12950 [Arabidopsis thalian 0.958 0.670 0.692 1.5e-227
TAIR|locus:2182295 865 AT5G12960 [Arabidopsis thalian 0.951 0.662 0.684 6e-222
UNIPROTKB|Q2KGY9 633 MGCH7_ch7g196 "Putative unchar 0.734 0.698 0.343 1.3e-61
TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2196 (778.1 bits), Expect = 1.5e-227, P = 1.5e-227
 Identities = 409/591 (69%), Positives = 485/591 (82%)

Query:     7 SIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTP 66
             +I    +  +F+L+   + AKECTN   +L+SHTFRS LL SKNE+   ++ SH  HLTP
Sbjct:     8 TIALLLYTSSFVLV---SVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-HLTP 63

Query:    67 SDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLG 126
             +DDSAW SL+PRK+L+EE  DE F+W MLYRK      FK    SG FLK+VSLHDVRL 
Sbjct:    64 ADDSAWSSLLPRKMLKEEA-DE-FAWTMLYRK------FKDSNSSGNFLKDVSLHDVRLD 115

Query:   127 SDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYL 186
              DS HWRAQQTNLEYLLMLDVD L W+FRK A L APG+ YGGWE P  ELRGHFVGHYL
Sbjct:   116 PDSFHWRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYL 175

Query:   187 SASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYY 246
             SA+A MWASTHN++LKEKMSA+VSALS CQ++ G+GYLSAFP+  FDR EA+ PVWAPYY
Sbjct:   176 SATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYY 235

Query:   247 TIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMN 306
             TIHKILAGL+DQY  A N++AL+M T M +YFY RV+NVI+KYS+ERHWQ+LNEE GGMN
Sbjct:   236 TIHKILAGLVDQYKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMN 295

Query:   307 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVT 366
             DVLY+L+ IT D K+L+LAHLFDKPCFLG+LA+QADDISGFH+NTHIPIV+GSQ RYE+T
Sbjct:   296 DVLYQLYSITGDSKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEIT 355

Query:   367 GDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVS 426
             GD LHK ISMFFMDI N+SH+YATGGTSV EFW DPKR+A+ L +  EESCTTYNMLKVS
Sbjct:   356 GDLLHKEISMFFMDIFNASHSYATGGTSVSEFWQDPKRMATALQTENEESCTTYNMLKVS 415

Query:   427 RHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSD 486
             R+LFRWTKE++YADYYER+LTNGVLGIQRGT+PG+MIY+LPL  G SK  +YH WGTP D
Sbjct:   416 RNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTPYD 475

Query:   487 SFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSW 546
             SFWCCYGTGIESFSKLGDSIYF+E+G  P +Y+ QYISS LDWKS  + ++QKV+PVVSW
Sbjct:   476 SFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSW 535

Query:   547 DPYLRVTLTFSSKGSGLT--TSLNLRIPTWTSSNGAKATLNGQDLPLPSPG 595
             DPY+RVT T SS   G+   ++LNLRIP WT+S GAK +LNG+ L +P+ G
Sbjct:   536 DPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSG 586
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_I0347
hypothetical protein (858 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XVI.1041.1
hypothetical protein (662 aa)
  •     0.455
estExt_fgenesh4_pm.C_LG_VI0086
hypothetical protein (670 aa)
  •     0.449
estExt_fgenesh4_pg.C_LG_X0561
alpha-galactosidase (EC-3.2.1.22) (649 aa)
  •     0.408
gw1.VIII.287.1
annotation not avaliable (630 aa)
  •     0.403
gw1.X.5154.1
annotation not avaliable (619 aa)
  •     0.401

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query602
pfam07944511 pfam07944, DUF1680, Putative glycosyl hydrolase of 1e-148
COG3533 589 COG3533, COG3533, Uncharacterized protein conserve 1e-57
>gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) Back     alignment and domain information 
 Score =  437 bits (1125), Expect = e-148
 Identities = 177/473 (37%), Positives = 246/473 (52%), Gaps = 27/473 (5%)

Query: 122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEE--PSCELRG 179
           DVRL +DS     QQTN EYLL LD D+L+  FR  A LP     YGGWE+  P    RG
Sbjct: 1   DVRL-TDSFWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59

Query: 180 HFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALI 239
           H +G +LSA A M AST +  L++++  +V  L+  Q+  G GYL  +P   FDR EA  
Sbjct: 60  HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQQ--GDGYLGTYPESNFDRNEAGN 117

Query: 240 PVWAP---YYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ 296
             WAP    Y + K++AGL+  Y      +AL + T + ++ Y+ V +V+    +++H  
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKHLY 176

Query: 297 TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIV 356
               E GG+N+ L +L+ +T D ++L LA  F     L  LA   D + G H NT I   
Sbjct: 177 P---EHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233

Query: 357 I-GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVG-EFWSDPKRLASNLDSNTE 414
           + G+   YE TGD      + FF + V + H Y TGG     E +  P  L +       
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPN--RLAYC 291

Query: 415 ESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSK 474
           E+C +YNMLK++R +  WT +  YADYYER+L N +L  Q   + G+  Y  PL  G  +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSP-DGGMFFYFNPLESGPKR 350

Query: 475 ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQI 534
            R    + TP DS WCC G G E+ +K GD IY   +    G+Y+  YI S  DWK    
Sbjct: 351 LR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGG 405

Query: 535 VVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQ 587
            V  + +    WD   +V LT  +      T L LRIP W +  GA  T+NG+
Sbjct: 406 EVTLRQETNYPWDG--QVRLTVKTAKPAEFT-LYLRIPGWAA--GATLTVNGK 453

The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511
>gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 602
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 100.0
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.98
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.34
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 98.05
COG1331667 Highly conserved protein containing a thioredoxin 97.92
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.9
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.88
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.85
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.75
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.61
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 97.53
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 97.28
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 97.12
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 97.12
COG3533589 Uncharacterized protein conserved in bacteria [Fun 97.08
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.86
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 96.61
COG1331667 Highly conserved protein containing a thioredoxin 96.56
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.45
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 96.3
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 96.26
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.23
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 95.84
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 95.84
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.8
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 95.76
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 95.74
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 95.54
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 95.29
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 95.01
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 94.98
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 94.37
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 93.88
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 93.81
PF06917557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 93.75
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 93.35
KOG2787403 consensus Lanthionine synthetase C-like protein 1 91.03
KOG2244786 consensus Highly conserved protein containing a th 90.96
PLN02266510 endoglucanase 90.48
KOG2244786 consensus Highly conserved protein containing a th 89.63
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 88.03
KOG2787403 consensus Lanthionine synthetase C-like protein 1 87.15
PLN02340614 endoglucanase 86.53
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 86.09
PLN02175484 endoglucanase 85.92
PLN02171629 endoglucanase 85.44
PLN02909486 Endoglucanase 85.2
PLN02345469 endoglucanase 84.84
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 83.5
PLN02420525 endoglucanase 82.52
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 82.21
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=3.2e-100  Score=850.34  Aligned_cols=456  Identities=38%  Similarity=0.629  Sum_probs=415.0

Q ss_pred             CeEecCCCchHHHHHHHHhhhhccCCcchhhhhHHhcCCCCCCCCCCCCC--CCCcCccccchhhHHHHHHHHHHhcCCh
Q 007471          122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWE--EPSCELRGHFVGHYLSASALMWASTHNE  199 (602)
Q Consensus       122 ~V~l~~~~~~~~~~~~~~~~ll~ld~drll~nFr~~AGl~~~g~~~ggWe--~~d~~lrGh~~g~wLsa~a~~~a~t~D~  199 (602)
                      +|+|+| |||+++|++++++++++++|+|+++||..|||+.++.++||||  ++++.++||++||||||+|++|+.++|+
T Consensus         1 ~V~l~~-~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~   79 (520)
T PF07944_consen    1 DVRLTD-GFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP   79 (520)
T ss_pred             CeEECc-HHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence            699996 8999999999999999999999999999999999888999999  8899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCcceecCCCchhhhhhccCCcccc----cchHHHHHHHHHHHHHHcCCHhHHHHHHHHH
Q 007471          200 SLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAP----YYTIHKILAGLLDQYTYADNAEALRMTTWMV  275 (602)
Q Consensus       200 ~L~~k~~~~Vd~l~~~Q~~~~dGYL~~~~~~~~~~~~~~~~~W~p----yy~~Hki~aGLl~~y~~tG~~~aL~ia~r~a  275 (602)
                      +|+++++++|+.|.+||+  +||||+++++..   .......|+|    +|+.|||+.||+++|++|||+++|++++|+|
T Consensus        80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a  154 (520)
T PF07944_consen   80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA  154 (520)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence            999999999999999999  999999998743   1234577888    9999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhcchhhhhhhcccccccchHHHHHHHHHHcCCHHHHHHHhhcccccccch--hhhcCCCCCCCCcCCCc
Q 007471          276 EYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGL--LALQADDISGFHSNTHI  353 (602)
Q Consensus       276 D~~~~~~~~~~~~~~~~~~~~~l~~E~GGm~~~L~~LY~~TGd~ryLdlA~~f~~~~~~~~--la~~~d~l~g~hant~i  353 (602)
                      ||+.++....    ..+.....+.+++|||+++|++||++|||++||++|++|++..++++  +..+.|.+++.|+|+++
T Consensus       155 d~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~  230 (520)
T PF07944_consen  155 DWVYRRLSRL----GPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI  230 (520)
T ss_pred             HHHHHHhccC----CHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence            9996554432    22233344567899999999999999999999999999999998888  78888999999999999


Q ss_pred             chhH-------HHHHHHHHhCCchHHHHHHHHHHHhhccCeeeccCCCCC---CCCCCCCcccCCCCcccccccchhHHH
Q 007471          354 PIVI-------GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVG---EFWSDPKRLASNLDSNTEESCTTYNML  423 (602)
Q Consensus       354 P~~~-------G~a~~Y~~TGD~~y~~aa~~~w~~v~~~~~y~TGG~g~~---E~f~~~~~L~~~l~~~~~ETCat~~~l  423 (602)
                      |.++       |.+++|++|||++|+++++++|++|+++|+|+|||+|++   |+|++++++|+  ...++|||++++||
T Consensus       231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~--~~~~~EtCas~~~~  308 (520)
T PF07944_consen  231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPN--RLAYAETCASVNMM  308 (520)
T ss_pred             eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCc--CCCCccccHHHHHH
Confidence            9998       999999999999999999999999999999999999999   99999999998  55679999999999


Q ss_pred             HHHHHHHccCCcchhHHHHHHHHhhhhcccCCCCCCCeeEEecCCCCCCCCccCCCCCCCCCCCccCCCCCccchhhhcc
Q 007471          424 KVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLG  503 (602)
Q Consensus       424 ~l~~~L~~~tgd~~YaD~~Er~lyN~ila~~~~~d~g~~~Y~~pl~~g~~k~~~~~~~~~~~~~f~CC~gt~~~~~~kl~  503 (602)
                      +|+++||++|||++|+|++||++||++||+++| |+++|+|+|||+++..+... ..+.++...||||+||++|+++||+
T Consensus       309 ~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~-~~~~~~~~~~~CC~~n~~r~~~~~~  386 (520)
T PF07944_consen  309 KLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRW-KNYRTPWFSFWCCPGNGARGWAKLP  386 (520)
T ss_pred             HHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCcccc-ccccCCCCCCCCCcchHHHHHHHHh
Confidence            999999999999999999999999999999997 99999999999987654211 2456677889999999999999999


Q ss_pred             cceeeeecCCCCcEEEEEecCcEEEeeecc--eEEEEEeCCCCCCCCCeEEEEEEEeCCCCeeeEEEEeccCCCCCCCcE
Q 007471          504 DSIYFEEEGKYPGVYIIQYISSRLDWKSGQ--IVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAK  581 (602)
Q Consensus       504 ~~iY~~~~~~~~~L~VnLY~pS~~~~~~~g--v~i~q~T~yP~~~~g~~~V~l~V~~~~~~~~f~L~lRIP~Wa~~~~~~  581 (602)
                      ++||+++++   +||||||+||+++|+.++  |+|+|+|+||++  +  +|+|+|++. ++.+|+|+||||+||+  +++
T Consensus       387 ~~iy~~~~~---~l~v~ly~~s~~~~~~~~~~v~i~q~T~yP~~--~--~v~i~v~~~-~~~~f~l~lRIP~Wa~--~~~  456 (520)
T PF07944_consen  387 DYIYFRDDD---GLYVNLYIPSELTWPVGGGTVTITQETDYPFE--G--TVRITVSPD-KPVPFTLRLRIPSWAK--GAT  456 (520)
T ss_pred             hhheEecCC---EEEEEEEcceEEEEEECCcEEEEEEecCCCCC--C--CEEEEEEcC-CCccEEEEEEccCCCC--CcE
Confidence            999999975   999999999999999877  999999998865  4  899999875 7899999999999998  799


Q ss_pred             EEECCee-ccCCCCCceEEec
Q 007471          582 ATLNGQD-LPLPSPGQNTIII  601 (602)
Q Consensus       582 i~VNG~~-~~~~~pG~y~~i~  601 (602)
                      |+|||++ .....||+|++|-
T Consensus       457 i~vNG~~~~~~~~~~gy~~i~  477 (520)
T PF07944_consen  457 IRVNGEPVVDTAVPGGYLTIE  477 (520)
T ss_pred             EEECCEeCCCCcCCCCeEEEE
Confidence            9999999 5555699999983

One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query602
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.5 bits (130), Expect = 8e-08
 Identities = 64/539 (11%), Positives = 137/539 (25%), Gaps = 176/539 (32%)

Query: 55  KQIHSHND---HLTPS---D-DSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQ--- 104
           +  + + D       +   + D   +  MP+ IL +EE D +          K+      
Sbjct: 13  EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII-------MSKDAVSGTL 65

Query: 105 --FKVPERSGE-----FLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLD-VDKLVWNFRK 156
             F       E     F++EV   + +     +    +Q ++   + ++  D+L +N   
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-YN--- 121

Query: 157 TARLPAPGEPYGGW-EEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAV---VSAL 212
                     Y     +P  +LR           AL+        L + +        AL
Sbjct: 122 ---DNQVFAKYNVSRLQPYLKLR----------QALLELRPAKNVLIDGVLGSGKTWVAL 168

Query: 213 SACQKEIGSGYLSAFPTEQF-------DRLEALI-PVWAPYYTIHKILAGLLDQ-YTYAD 263
             C              + F       +  E ++  +    Y I        D       
Sbjct: 169 DVCLSY---KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 264 NAEAL--RMTTWMVEYFYNR-------VQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFC 314
              ++   +   +    Y         VQN        + W           ++  K+  
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQN-------AKAWNAF--------NLSCKILL 270

Query: 315 ITQD-----------PKHLMLAHL---FDKPCFLGLLAL-----------QADDISGFHS 349
            T+              H+ L H            LL             +    +    
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 350 NTHIPIVIGSQMR--------YE-VTGDQLHKTISMF------------------FMDIV 382
           +     +I   +R        ++ V  D+L   I                     F    
Sbjct: 331 S-----IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 383 N-SSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADY 441
           +  +   +         W D      +           Y++++      +  KE   +  
Sbjct: 386 HIPTILLSL-------IWFDVI---KSDVMVVVNKLHKYSLVE------KQPKESTIS-I 428

Query: 442 YERSLTNGVLGIQRGTEPGV---MI--YLLPLAPGSSKERSYHHWG---TPSDSFWCCY 492
               L    L ++   E  +   ++  Y +P        +++          D ++  +
Sbjct: 429 PSIYL---ELKVKLENEYALHRSIVDHYNIP--------KTFDSDDLIPPYLDQYFYSH 476

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query602
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 99.1
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 99.09
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.91
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.84
3pmm_A382 Putative cytoplasmic protein; structural genomics, 98.75
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.64
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.52
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.44
1nc5_A373 Hypothetical protein YTER; structural genomics, he 98.39
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 98.36
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 98.34
3k11_A445 Putative glycosyl hydrolase; structural genomics, 98.34
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 98.19
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.11
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 98.08
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.98
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.87
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.66
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.63
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 97.5
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 96.73
3k11_A445 Putative glycosyl hydrolase; structural genomics, 96.7
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 96.13
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 95.91
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 95.86
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 95.75
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 95.68
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 95.11
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 95.03
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 94.9
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 94.79
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 94.71
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 94.08
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 93.25
2v8i_A543 Pectate lyase; periplasm, beta-elimination, pectin 93.23
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 93.15
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 92.8
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 92.63
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 91.81
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 90.19
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 89.28
1r76_A408 Pectate lyase; A-helical structure; 2.65A {Azospir 87.72
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 86.43
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 85.56
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 85.04
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 84.52
2v8i_A543 Pectate lyase; periplasm, beta-elimination, pectin 82.09
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 81.77
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
Probab=99.10  E-value=5.1e-09  Score=111.67  Aligned_cols=236  Identities=12%  Similarity=0.044  Sum_probs=146.9

Q ss_pred             hhhHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhcCCcceecCCCchhhhhhccCCcccccchHHHHHHHHHHHHHH
Q 007471          182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY  261 (602)
Q Consensus       182 ~g~wLsa~a~~~a~t~D~~L~~k~~~~Vd~l~~~Q~~~~dGYL~~~~~~~~~~~~~~~~~W~pyy~~Hki~aGLl~~y~~  261 (602)
                      .|.|...+.++|..|+|+++++.+..+.+.|.+.-.  ..  +.+          +.+|      .+-++..++...|++
T Consensus        44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~--~~--~~~----------~~HD------~Gf~~~~s~~~~y~l  103 (377)
T 2ahf_A           44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLD--RF--ENL----------DHHN------IGFLYSLSAKAQWIV  103 (377)
T ss_dssp             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHT--TT--TTC----------CBST------HHHHHHTTHHHHHHH
T ss_pred             cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh--cc--cCC----------CCCC------chHhhHHHHHHHHHH
Confidence            699999999999999999999999999988875432  00  000          0111      122233445578999


Q ss_pred             cCCHhHHHHHHHHHHHHHHHhhhhhhcchhhhhhhcc-cccc-c-------chHHHHHHHHHHcCCHHHHHHHhhc---c
Q 007471          262 ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTL-NEEA-G-------GMNDVLYKLFCITQDPKHLMLAHLF---D  329 (602)
Q Consensus       262 tG~~~aL~ia~r~aD~~~~~~~~~~~~~~~~~~~~~l-~~E~-G-------Gm~~~L~~LY~~TGd~ryLdlA~~f---~  329 (602)
                      |||+++++++.+.|+++..++.+..+.   -++|..+ .++. |       -|..+|++.+++|||++|++.|++-   .
T Consensus       104 tg~~~~~~~~~~aA~~L~~r~~~~~g~---i~sw~~~~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~A~~~a~~~  180 (377)
T 2ahf_A          104 EKDESARKLALDAADVLMRRWRADAGI---IQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKS  180 (377)
T ss_dssp             HCCHHHHHHHHHHHHHHHTTEETTTTE---ECCBSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHhCCCCCCe---EEeccCCCCCCCCceEEechHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            999999999999999999998753211   1344321 1111 1       0235899999999999999999862   1


Q ss_pred             ccc------------ccchhhhcC---CCCCCCCcCC------CcchhHHHHHHHHHhCCchHHHHHHHHHHHhhccCee
Q 007471          330 KPC------------FLGLLALQA---DDISGFHSNT------HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTY  388 (602)
Q Consensus       330 ~~~------------~~~~la~~~---d~l~g~hant------~iP~~~G~a~~Y~~TGD~~y~~aa~~~w~~v~~~~~y  388 (602)
                      -..            .+|+.....   ....|.+ +.      +.-.+.|.+..|+.|+|++|++.++..-+.+.++ . 
T Consensus       181 l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~-dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~-  257 (377)
T 2ahf_A          181 RRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNT-DGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V-  257 (377)
T ss_dssp             HHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSS-TTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-
T ss_pred             HHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcC-CcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-
Confidence            111            123221100   0111222 22      2445689999999999999999999988888753 3 


Q ss_pred             eccCCCCCCCCCCCCcccCCCCcccccccchhHHHHHHHHHHccCC-----cchhHHHHHHHHhhh
Q 007471          389 ATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTK-----EIAYADYYERSLTNG  449 (602)
Q Consensus       389 ~TGG~g~~E~f~~~~~L~~~l~~~~~ETCat~~~l~l~~~L~~~tg-----d~~YaD~~Er~lyN~  449 (602)
                      .-.|+. --.+..| .++.......+-.+++.+++++++    +++     +.+|.+..|+++=.-
T Consensus       258 ~~d~~p-ywd~~~~-~~~~~~~d~Sa~aiaA~~Ll~L~~----~~~~~~~~~~~Y~~~A~~~l~~l  317 (377)
T 2ahf_A          258 PEDGVV-YWDFEVP-QEPSSYRDSSASAITACGLLEIAS----QLDESDPERQRFIDAAKTTVTAL  317 (377)
T ss_dssp             CTTSSC-BSBTTSC-CCTTSCBCHHHHHHHHHHHHHHHH----TSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCc-ccccCCC-ccCCCccCCCHHHHHHHHHHHHHH----hcCccccchHHHHHHHHHHHHHH
Confidence            222221 1111111 122211122334555566666555    564     678999999887554
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query602
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.78
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.98
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.96
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.92
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.81
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 97.59
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 97.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 96.94
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 96.88
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 96.77
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 96.48
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 96.24
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 96.2
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 96.12
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 96.06
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 95.84
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 95.73
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 94.93
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 94.65
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 94.21
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 93.98
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 93.0
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 91.31
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 91.29
d1r76a_408 Polygalacturonic acid lyase (pectate lyase) {Azosp 83.03
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 80.07
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyl Hydrolase Family 88
domain: Unsaturated glucuronyl hydrolase
species: Bacillus sp. GL1 [TaxId: 84635]

Probab=98.78  E-value=7.6e-08  Score=100.12  Aligned_cols=244  Identities=12%  Similarity=0.044  Sum_probs=144.0

Q ss_pred             hhhHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhcCCcceecCCCchhhhhhccCCcccccchHHHHHHHHHHHHHH
Q 007471          182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY  261 (602)
Q Consensus       182 ~g~wLsa~a~~~a~t~D~~L~~k~~~~Vd~l~~~Q~~~~dGYL~~~~~~~~~~~~~~~~~W~pyy~~Hki~aGLl~~y~~  261 (602)
                      -|.|-..+..+|..|+|+++++.+.++++.+...-.  ..-.+               +.+.   .++.+..++++.|+.
T Consensus        44 ~Gf~~G~lwl~ye~Tgd~~~~~~a~~~~~~~~~~~~--~~~~~---------------~~hd---~Gf~~~~s~~~~y~~  103 (377)
T d2d5ja1          44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLD--RFENL---------------DHHD---IGFLYSLSAKAQWIV  103 (377)
T ss_dssp             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--TTTTC---------------SSST---HHHHHHTTHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc--ccccc---------------cccC---cchhhHhHHHHHHHH
Confidence            578777777889999999999999999988765433  11111               1111   233444556689999


Q ss_pred             cCCHhHHHHHHHHHHHHHHHhhhhhhcchhhhhhhcc-ccc-------ccchH-HHHHHHHHHcCCHHHHHHHhhccc--
Q 007471          262 ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTL-NEE-------AGGMN-DVLYKLFCITQDPKHLMLAHLFDK--  330 (602)
Q Consensus       262 tG~~~aL~ia~r~aD~~~~~~~~~~~~~~~~~~~~~l-~~E-------~GGm~-~~L~~LY~~TGd~ryLdlA~~f~~--  330 (602)
                      |||+++++++...++.+..++.+....   .+.|... .+.       -+-|+ ..|++++++|||++|++.|.+...  
T Consensus       104 Tgd~~y~~~a~~~a~~L~~r~~~~~g~---~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~~~~tgd~~y~~~A~~h~~~~  180 (377)
T d2d5ja1         104 EKDESARKLALDAADVLMRRWRADAGI---IQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKS  180 (377)
T ss_dssp             HCCHHHHHHHHHHHHHHHTTEETTTTE---ECCSSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHhcCcCCCc---cccCCCCCCCCCCccchhhhhhhHHHHHHHHHhcCCHhHHHHHHHHHHHH
Confidence            999999999999999999887643211   1122111 000       01244 457899999999999999875311  


Q ss_pred             -ccc------------cchhhh---cCCCCCCCCcC-----CCcchhHHHHHHHHHhCCchHHHHHHHHHHHhhccCeee
Q 007471          331 -PCF------------LGLLAL---QADDISGFHSN-----THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA  389 (602)
Q Consensus       331 -~~~------------~~~la~---~~d~l~g~han-----t~iP~~~G~a~~Y~~TGD~~y~~aa~~~w~~v~~~~~y~  389 (602)
                       +..            +++...   ......|.+.+     .+--.+.|.+..|+.|+|+.|+++++..-+.+.+ ++=.
T Consensus       181 ~~~l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~~~l~~a~~~a~~~l~-~~~~  259 (377)
T d2d5ja1         181 RRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLA-RVPE  259 (377)
T ss_dssp             HHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT-TCCT
T ss_pred             HHHhcCCCCCeEEEEEecCCCCcccCCCCCCCCCCcchHhhchHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH-hCCC
Confidence             101            111100   00001121211     1222347889999999999999999988888774 3311


Q ss_pred             ccCCCCCCCCCCCCcccCCCCcccccccchhHHHHHHHHHHccCCc-chhHHHHHHHHhhhhccc
Q 007471          390 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE-IAYADYYERSLTNGVLGI  453 (602)
Q Consensus       390 TGG~g~~E~f~~~~~L~~~l~~~~~ETCat~~~l~l~~~L~~~tgd-~~YaD~~Er~lyN~ila~  453 (602)
                      .| +. .-.|..|.. +.......+-.|++++|+++++.+-.-..+ .+|.+..++++ .++.+.
T Consensus       260 dg-i~-~wd~~~p~~-~~~~~DsSa~Ai~A~gll~L~~~~~~~~~~~~~Y~~~a~~i~-~~l~~~  320 (377)
T d2d5ja1         260 DG-VV-YWDFEVPQE-PSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTV-TALRDG  320 (377)
T ss_dssp             TS-CC-BSBTTSCCC-TTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH-HHHHHH
T ss_pred             CC-Cc-cccccccCC-CCCCCCcchHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH-HHHHHh
Confidence            11 11 122222221 111123345569999999999864322222 34777777665 444443
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure