Citrus Sinensis ID: 007473
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 602 | 2.2.26 [Sep-21-2011] | |||||||
| Q944C1 | 597 | Phosphoinositide phosphol | yes | no | 0.980 | 0.988 | 0.603 | 0.0 | |
| Q8GV43 | 613 | Phosphoinositide phosphol | no | no | 0.945 | 0.928 | 0.581 | 0.0 | |
| Q944C2 | 578 | Phosphoinositide phosphol | no | no | 0.951 | 0.991 | 0.573 | 0.0 | |
| Q39033 | 581 | Phosphoinositide phosphol | no | no | 0.951 | 0.986 | 0.545 | 0.0 | |
| Q9LY51 | 584 | Phosphoinositide phosphol | no | no | 0.956 | 0.986 | 0.525 | 1e-174 | |
| Q39032 | 561 | Phosphoinositide phosphol | no | no | 0.905 | 0.971 | 0.467 | 1e-149 | |
| Q56W08 | 564 | Phosphoinositide phosphol | no | no | 0.903 | 0.964 | 0.460 | 1e-142 | |
| Q9STZ3 | 531 | Phosphoinositide phosphol | no | no | 0.868 | 0.984 | 0.397 | 1e-109 | |
| Q6NMA7 | 531 | Phosphoinositide phosphol | no | no | 0.853 | 0.967 | 0.395 | 1e-103 | |
| Q2VRL0 | 637 | 1-phosphatidylinositol 4, | yes | no | 0.911 | 0.861 | 0.302 | 4e-60 |
| >sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/595 (60%), Positives = 440/595 (73%), Gaps = 5/595 (0%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY C + FTRK ++ E+GP DV+++F+KY EG HM+ EQL + + E G G
Sbjct: 7 MGSYKFCLI---FTRKFRMTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGET 63
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
S+E+AE+IVD+VL+R HHIA+FTRR+LT++DF++YLFSTDLNPP+ +QV+Q+M APLSHY
Sbjct: 64 SLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQVHQNMDAPLSHY 123
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ SS+CS++PI AL+RGVRV+ELDLWP DDV V HGRTLT V
Sbjct: 124 FIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEV 182
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
+L KCL +IK NAF+ S YPVI+T EDHL P LQ KVA+MITQTFG MLY +S+ +EF
Sbjct: 183 KLGKCLESIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEF 242
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELK +I+ISTKPPKE E KD KGK S EDV GKEP DL + Q+D ++
Sbjct: 243 PSPEELKEKILISTKPPKEYLEAND-TKEKDNGEKGKDSDEDVWGKEPEDLISTQSDLDK 301
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
++ NQ DE+ + YKRLIAIH GK KG L+ L + K+RR+
Sbjct: 302 VTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRL 361
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SLSEQ EKA SYG DV+RFTQKN LRIYPK TR NSSNYKP IGW+ GAQM+A NMQG
Sbjct: 362 SLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQG 421
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
YG++LWLM GMFRAN GCGYVKKP+FL+ P+ Q F PK+ KKTLKVK MGDGW
Sbjct: 422 YGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGWL 481
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
LDFK+ +SPP F+ RVGIAG P D+ M+ TK + D WTP+W+ EFTFPL +PE+AL
Sbjct: 482 LDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELAL 541
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LRVEV ++ + EKD+F GQTCLPV ++R GI AVPLF+RKG + S RLLMRFEF
Sbjct: 542 LRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEF 596
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1 |
| >sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/602 (58%), Positives = 436/602 (72%), Gaps = 33/602 (5%)
Query: 13 FTRKHKVAEAGPPADVKEMFKKYAEGGTH----------------MTAEQLWQFLVEVQG 56
+ RK K+ E P DV++ F ++A GG M AEQL FL
Sbjct: 25 YNRKFKINEVTPTDDVRDAFCQFAVGGGGGGTDGDSSDGDGSTGVMGAEQLCSFL---DD 81
Query: 57 HG-GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTA 115
HG ++ +A++++D+V++R HH+ RFTR L ++DF ++LF DLNPP+ V+QDMTA
Sbjct: 82 HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPITPHVHQDMTA 141
Query: 116 PLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175
PLSHYFIYTGHNSYL GNQ SSDCS+VP+ KAL+RGVRVIELDLWPNS D+ VLHGRT
Sbjct: 142 PLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDINVLHGRT 201
Query: 176 LTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE 235
LTTPV L+KCL++I++ AFS+SPYPVI+T EDHL P LQAKVA+M TQ FG MLY PES+
Sbjct: 202 LTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESD 261
Query: 236 CLKEFPSPEELKYRIIISTKPPKERREKKG-INNRKDISAKGKISTEDVLGKEPPDLTAN 294
L EFPSP L +RIIISTKPPKE E + I +KD + E +E L +
Sbjct: 262 SLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSSEDETPRTEEIQTLESM 321
Query: 295 QADDERSDYDT-SEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQ 353
D D+++ S+ +Q DE+ +E AYKRLI IH GK KG +KEE+ +
Sbjct: 322 LFD---QDFESKSDSDQEDEEASE--------DQKPAYKRLITIHAGKPKGTVKEEMKVV 370
Query: 354 LEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQM 413
++KVRR+SLSEQ+ ++ S DVVRFTQ+N+LRIYPK TR NSSNYKP+IGW HGAQM
Sbjct: 371 VDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGAQM 430
Query: 414 VALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKA 473
+A NMQGYGKSLWLMHGMFRAN GCGYVKKPNFL+K+G D+VFDP++KLPVK+TLKVK
Sbjct: 431 IAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKVKV 490
Query: 474 YMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL 533
YMGDGW +DF +SPP FYT++ I GVPAD K TK DNW P+WD+EF+FPL
Sbjct: 491 YMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSFPL 550
Query: 534 TIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRF 593
T+PE+ALLR+EVR+Y M EKD+F GQTCLPV +LRPGI +VPL+D+KGE++ S RLLMRF
Sbjct: 551 TVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLMRF 610
Query: 594 EF 595
F
Sbjct: 611 IF 612
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/595 (57%), Positives = 427/595 (71%), Gaps = 22/595 (3%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY + GL C + K ++ PP DV F +Y EG +HMTAEQL +FLVEVQ V
Sbjct: 5 MGSYKM-GL--CCSDKLRMNRGAPPQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEV 61
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
+ DAE+I++++ HHI +F R +L ++DF +LFS DLN P+ ++V+QDM +PLSHY
Sbjct: 62 LVSDAEKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSKVHQDMASPLSHY 121
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYT HNSYL GNQ +S+CSDVP+ KALKRGVR +ELD+WPNS KDD+LVLHG T PV
Sbjct: 122 FIYTSHNSYLTGNQINSECSDVPLIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPV 181
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
EL+KCLR+IKE+AF AS YPVILT EDHL P LQAK A+M+ + F M+Y PE+ LKEF
Sbjct: 182 ELVKCLRSIKEHAFYASAYPVILTLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEF 241
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPE+LKY+I+ISTKPPK + RKD K S D GK D++A DDE+
Sbjct: 242 PSPEDLKYKIVISTKPPKG-------SLRKD-----KDSESDASGKASSDVSA---DDEK 286
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
++ +TSE ++ + D+ + L Y RLI I +G K LKE L + VRR+
Sbjct: 287 TEEETSEA----KNEEDGFDQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRL 342
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SL EQKF+KA YGT+V++FTQKN+LRIYPK TRVNSSNY+P GW++GAQMVA NMQG
Sbjct: 343 SLREQKFKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQG 402
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
YG++LW+MHGMFR N GCGYVKKP+F++ +VF+PK KLP+KKTLKVK YMG GW
Sbjct: 403 YGRALWMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWD 462
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
F++ WS P FYTRVGI GV DK MK TKK+ W P W++EF F LT+PE+AL
Sbjct: 463 SGFQRTCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELAL 522
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LR+EV Y+MPEKD+F+GQTCLPV +LR GI +VPL+DRKGE L S LLMRF F
Sbjct: 523 LRIEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHF 577
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 413/596 (69%), Gaps = 23/596 (3%)
Query: 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSI 62
+Y +C CF R+ + + P ++K +F+KY+E G MT + L +FL++VQ +
Sbjct: 5 TYKVC---FCFRRRFRYTASEAPREIKTIFEKYSENGV-MTVDHLHRFLIDVQKQDKATR 60
Query: 63 EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLG-NQVYQDMTAPLSHYF 121
EDA+ I++ H R L ++ F YLF D NPPL ++V+ DM AP+SHYF
Sbjct: 61 EDAQSIINSASSLLH------RNGLHLDAFFKYLFG-DNNPPLALHKVHHDMDAPISHYF 113
Query: 122 IYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVE 181
I+TGHNSYL GNQ SSDCS+VPI ALK+GVRVIELD+WPNS KDD+ VLHG TLTTPV
Sbjct: 114 IFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVG 173
Query: 182 LIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE-SECLKEF 240
LIKCL+AI+ +AF S YPV++T EDHL P LQ+KVA+M+T+ FG +L++P E LKEF
Sbjct: 174 LIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEF 233
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGK-ISTEDVLGKEPPDLTANQADDE 299
PSP LK RIIISTKPPKE +E K + ++ KGK + E+V G+E P +
Sbjct: 234 PSPNSLKRRIIISTKPPKEYKEGKDV----EVVQKGKDLGDEEVWGREVPSFIQRNKSEA 289
Query: 300 RSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRR 359
+ D D ++ + D+D + ++ + YK LIAIH GK KG + E L + +KVRR
Sbjct: 290 KDDLDGNDDDDDDDDEDK-----SKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRR 344
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
+SLSE++ EKAA Y +VRFTQ N+LRIYPK TRV SSNY P++GW HGAQMVA NMQ
Sbjct: 345 LSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQ 404
Query: 420 GYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGW 479
GYG+SLWLM GMFRAN GCGY+KKP+ LLK G D +FDPK LPVK TL+V YMG+GW
Sbjct: 405 GYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTVYMGEGW 464
Query: 480 YLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA 539
Y DF+ +SPP FYTRVGIAGVP D MK TK DNW P WD+ F FPLT+PE+A
Sbjct: 465 YFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELA 524
Query: 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LLR+EV +Y M EKD+F GQTCLPV++L GI A PL RKGE+ S +LL++ EF
Sbjct: 525 LLRLEVHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEF 580
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.phosphatidylinositol. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q9LY51|PLCD7_ARATH Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 613 bits (1581), Expect = e-174, Method: Compositional matrix adjust.
Identities = 313/596 (52%), Positives = 408/596 (68%), Gaps = 20/596 (3%)
Query: 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSI 62
+Y +C CF R+++ + PA++K +F Y++ G MT + L +FL++VQ +
Sbjct: 5 TYKVC---FCFRRRYRHTVSVAPAEIKTLFDNYSDKGL-MTTDLLLRFLIDVQKQDKATK 60
Query: 63 EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFI 122
E+A+ IV+ H R L ++ F YLF+ +P +V+QDM APLSHYFI
Sbjct: 61 EEAQDIVNASSSLLH------RNGLHLDAFFKYLFAVTNSPLSSLEVHQDMDAPLSHYFI 114
Query: 123 YTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVEL 182
YTGHNSYL GNQ SSDCS++PI +ALK+GVRVIELD+WPNS +D + VLHGRTLT+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 183 IKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFP 241
IKCLRAI+E+AF S YPV++T EDHL P LQAKVA+M+T FG ML++P S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 242 SPEELKYRIIISTKPPKERREKKGINNRKDISAKGK-ISTEDVLGKEPPDLTANQADDER 300
SP LK RI+ISTKPPKE + D+ KG+ + ++V G+E P ++
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAA----TDDDLVKKGRDLGDKEVWGREVPSFIRRDRSVDK 290
Query: 301 SDYDTSEHNQCDEDNTEACDRV-TRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRR 359
+D + + + D+D+ + + + YK LIAI GK KG + E L + +KVRR
Sbjct: 291 NDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVRR 350
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
+SLSE++ EKA+ Y +VRFTQ+N+LR+YPK TR+ SSNY P+I W HGAQMVA NMQ
Sbjct: 351 LSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNMQ 410
Query: 420 GYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGW 479
G G+SLW+M GMFR N GCGY+KKP+ LLK + VFDP+ LPVK TL+V YMG+GW
Sbjct: 411 GLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLPVKTTLRVTIYMGEGW 467
Query: 480 YLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA 539
Y DF +SPP FYTRVGIAGVPAD MK TK DNW P WD+ F FPLT+PE+A
Sbjct: 468 YYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPELA 527
Query: 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LLR+EV +Y M EKD+F GQ CLPV++LR GI AVPL ++ G + S +LL+R EF
Sbjct: 528 LLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEF 583
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q39032|PLCD1_ARATH Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/584 (46%), Positives = 359/584 (61%), Gaps = 39/584 (6%)
Query: 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQ 71
C R KV + PP ++K +F Y++ M+A+++ +F+++VQG I V
Sbjct: 10 CCVRNFKVKSSEPPEEIKNLFHDYSQDD-RMSADEMLRFVIQVQGETHADI----NYVKD 64
Query: 72 VLQRWHHIARFTRRSLTVEDFHHYLFSTDLNP-PLGNQVYQDMTAPLSHYFIYTGHNSYL 130
+ R H F R + +E F+ YL S +P PL +V+QDM PLSHYF+YTGHNSYL
Sbjct: 65 IFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYTGHNSYL 124
Query: 131 IGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190
GNQ +S+ S PI KAL+ GVRVIELDLWPNS+ + V HG TLT+ +L KCL +K
Sbjct: 125 TGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGGTLTSREDLQKCLNVVK 184
Query: 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRI 250
ENAF S YPV+LT EDHL P LQ KVA+M+++TFG L+ E + FPSPE LK +I
Sbjct: 185 ENAFQVSAYPVVLTLEDHLTPILQKKVAKMVSKTFGGSLFQCTDETTECFPSPESLKNKI 244
Query: 251 IISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQ 310
+ISTKPPKE + + +KG + E K+ D
Sbjct: 245 LISTKPPKEYLQTQ--------ISKGSTTDESTRAKKISDAEEQVQ-------------- 282
Query: 311 CDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKA 370
S + Y+ LI+IH G KG LK LN +V R+S+SEQ E
Sbjct: 283 ----------EEDEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETL 332
Query: 371 AVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHG 430
A + G D+V+FTQ+N+LRI+PK TR +SSNY P++GWIHGAQMVA NMQ +G+ LW+M G
Sbjct: 333 AKTRGPDLVKFTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLWMMQG 392
Query: 431 MFRANAGCGYVKKPNFLLKEGPDDQVFDP-KEKLPVKKTLKVKAYMGDGWYLDFKQMDCK 489
MF+AN GCGYVKKP+ LL GP+ ++FDP + LP+K TLKVK Y G+GW +DF
Sbjct: 393 MFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPLDHFD 452
Query: 490 FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYS 549
+SPP FY +VGIAGVP D T+ D W P+WD EF FPL +PE++LL + V+ Y
Sbjct: 453 RYSPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITVKDYD 512
Query: 550 MPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRF 593
+++FAGQTC P+ ++RPGI AV L DR GE RLLMRF
Sbjct: 513 SNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q56W08|PLCD3_ARATH Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/584 (46%), Positives = 360/584 (61%), Gaps = 40/584 (6%)
Query: 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQ 71
C +R K PP +K +F+ Y+ G M+ ++L +F+ EVQG ++ + I
Sbjct: 10 CCSRSFKEKTRQPPVSIKRLFEAYSRNGK-MSFDELLRFVSEVQGERHAGLDYVQDIFHS 68
Query: 72 VLQRWHHIARFTRRSLTVEDFHHYLFSTDLNP-PLGNQVYQDMTAPLSHYFIYTGHNSYL 130
V HH + + F+ YLFS +P P+ QV+ DM APLSHYF+YTGHNSYL
Sbjct: 69 VK---HHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYL 125
Query: 131 IGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190
GNQ +S S PI +AL++GV+VIELDLWPN + + V HGRTLT+ +L KCL AIK
Sbjct: 126 TGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQKCLTAIK 185
Query: 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRI 250
+NAF S YPVI+T EDHL P LQA+VA+M+T+T+ ML+ SE K FPSPEELK +I
Sbjct: 186 DNAFHVSDYPVIITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPEELKGKI 245
Query: 251 IISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQ 310
+ISTKPPKE E K ++ + + K + + AN+ +E D +
Sbjct: 246 LISTKPPKEYLESKTVHTTRTPTVK----------ETSWNRVANKILEEYKDME------ 289
Query: 311 CDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKA 370
S + Y+ LIAIH K K+ L+ EK R+S+ EQ +
Sbjct: 290 ---------------SEAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWLDTM 334
Query: 371 AVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHG 430
+ GTD+VRFTQ+N++RIYPK TRV+SSNY P +GW HGAQMVA NMQG+GK LW+M G
Sbjct: 335 VRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQG 394
Query: 431 MFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKF 490
MFR N GCGYVKKP LL E +FDP ++ P+K TLKVK Y G+GW LDF
Sbjct: 395 MFRGNGGCGYVKKPRILLDE---HTLFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQ 451
Query: 491 WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMALLRVEVRKYS 549
+SPP F+ ++GIAGVP D T+ VD W P+W +DEF F L++PE+ALL +V+ Y
Sbjct: 452 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYD 511
Query: 550 MPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRF 593
+++FAGQTCLP+ +L+ G+ AV L DR G+ + RLL+ F
Sbjct: 512 NDTQNDFAGQTCLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q9STZ3|PLCD8_ARATH Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/586 (39%), Positives = 323/586 (55%), Gaps = 63/586 (10%)
Query: 14 TRKHKVAEAGPPADVKEMFKKYAEG-GTHM--TAEQLWQFLVEVQGHGGVSIEDAEQIVD 70
TR+ + A P + + F G G M T +L + L + G + A++I
Sbjct: 4 TRRWESHPANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAA 63
Query: 71 QVLQRWHHIARFTR-RSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSY 129
++ +R I F R R L ++ + +LFST LNPP+G+QV+ DM APLSHYFI+T NSY
Sbjct: 64 ELNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQVHHDMHAPLSHYFIHTSLNSY 123
Query: 130 LIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189
GN F S +PI +AL++GVRV+ELDLWP+ + + V P++L +CL +I
Sbjct: 124 FTGNVFGK-YSILPIIEALEQGVRVVELDLWPD-GRGSICVRPSWNFEKPLKLQECLDSI 181
Query: 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYR 249
KE+AF+ YP+I+TF+D L P LQ+K QMI QTF M+Y + L+ FPSP++L+ +
Sbjct: 182 KEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRNK 241
Query: 250 IIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHN 309
I+IS +PPKE L AN D + + E
Sbjct: 242 ILISRRPPKEL------------------------------LYANDDDGKVGVRNGVEIR 271
Query: 310 QCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEK 369
Q D Y+ L++ H + +G L+ L + K++R
Sbjct: 272 QHPADPN--------------YQSLVSFHVVEPRGMLQNVLTGKANKIQRPGW------- 310
Query: 370 AAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMH 429
Y TD++ FTQK LR P++ + + YKP W+HGAQ++AL+ + + LWLM
Sbjct: 311 ----YETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQ 366
Query: 430 GMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCK 489
GMFRAN GCGYVKKP+FLL GP VF P V K LKVK YMGDGW +DFK+ +
Sbjct: 367 GMFRANGGCGYVKKPDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDFKKRIGR 425
Query: 490 FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYS 549
S P Y R+ IAGVP D+ + T K + WTP W +EFTFPLT P++AL+ EV Y
Sbjct: 426 L-SKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYE 484
Query: 550 MPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
+ D F GQTCLPV +L GI AVPL+D +G+ S LL RF++
Sbjct: 485 VSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q6NMA7|PLCD9_ARATH Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/592 (39%), Positives = 318/592 (53%), Gaps = 78/592 (13%)
Query: 15 RKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEV---QGHGGVSIEDAEQIVDQ 71
+K ++ +A P V F+ G L F+ + + G + AEQI +
Sbjct: 6 KKFEMKQANQPGRVPNYFRNKYHGYDDDMPNLLPTFIKLLDTEKDEDGAGLNAAEQIDRE 65
Query: 72 VLQRWHHIARFTRRSLTVEDFHH---YLFSTDLNPPLGNQV-YQDMTAPLSHYFIYTGHN 127
+ R I +F R+LT+ + H +LFST+LNPP+ +QV ++DM APLSHYFI+T
Sbjct: 66 LKSRKCDILKF--RNLTILELPHLNEFLFSTELNPPISDQVRHRDMNAPLSHYFIHTSLK 123
Query: 128 SYLIGNQ-FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCL 186
SY GN F S PI ALK+GVRV+ELDL P KD + V P+EL +CL
Sbjct: 124 SYFTGNNVFGRLYSIEPIIDALKQGVRVVELDLLP-FGKDGICVRPKWNFEKPLELQECL 182
Query: 187 RAIKENAFSAS-PYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE-SECLKEFPSPE 244
AIK++AF+ + YPVI+T +D L P LQ+KV QMI QTFG M+Y + + L+EFPSP
Sbjct: 183 DAIKQHAFTPTRSYPVIITIKDSLKPDLQSKVTQMIDQTFGDMVYHEDPQQSLEEFPSPA 242
Query: 245 ELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYD 304
EL+ +I+IS +PP + K + N ++
Sbjct: 243 ELQNKILISRRPPTKLLYAKAVENGVELE------------------------------- 271
Query: 305 TSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSE 364
+ S Y+ ++ H + +G L++ L +++
Sbjct: 272 -----------------IQEGSTDKNYQSVVGFHAVEPRGMLQKALTDDVQQ-------- 306
Query: 365 QKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSN-YKPMIGWIHGAQMVALNMQGYGK 423
Y DV+ FTQ LR PK+ + S+ YKP W+HGAQM+AL+ Q +
Sbjct: 307 ------PGWYERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKE 360
Query: 424 SLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDF 483
LWLM GMFRAN GCGYVKKPNFLL G VF P E V KTLKVK YMGDGW +DF
Sbjct: 361 KLWLMQGMFRANGGCGYVKKPNFLLNAG-SSGVFYPTENPVVVKTLKVKIYMGDGWIVDF 419
Query: 484 KQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRV 543
K+ + S P Y R+ IAGVP D+K+ +T K + W P W +EFTFPLT P++AL+
Sbjct: 420 KKRIGRL-SKPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISF 478
Query: 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
EV Y + D F GQTCLPV +L GI AVPL+D +G+ S LL RF++
Sbjct: 479 EVYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q2VRL0|PLCZ1_CHICK 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 OS=Gallus gallus GN=PLCZ1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 267/585 (45%), Gaps = 36/585 (6%)
Query: 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF-TRR 85
+ E+F Y+E ++ +L FL + Q E AE +V+ ++ I RR
Sbjct: 74 EFHEIFCAYSENRKNLADTELTAFLKKEQ----FKTEGAETTALEVILKYEPIDEVRKRR 129
Query: 86 SLTVEDFHHYLFSTDLN--PPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVP 143
L+ E F Y+ S D VYQDM PL YFI + HN+YL+ +Q
Sbjct: 130 QLSFEGFIRYMSSEDCTIFKKEHRTVYQDMNHPLCDYFISSSHNTYLVSDQLIGPSDLNG 189
Query: 144 ITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVIL 203
AL +G R +E+D W S D V V HG TLT+ + + + + AF+AS YPV+L
Sbjct: 190 YISALLKGCRCLEIDCWDGSNNDPV-VYHGHTLTSKITFCSVIHVVDKYAFAASDYPVVL 248
Query: 204 TFEDHLNPHLQAKVAQMITQTFG-AMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERR 261
+ E+H + Q ++AQ + G +L SP + + + PSPE LK++I++ K
Sbjct: 249 SLENHCSTKQQERIAQYLLNILGDKLLTSPIGDIEVTQLPSPEALKFKILVKNKKCGTIE 308
Query: 262 EKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDR 321
E R G++S E++ + DE +D T + + ++ R
Sbjct: 309 ETMLRKGRDSHGETGEVSEEEI-----------TSSDEETDEKTPLYPKSGSSKRKSEGR 357
Query: 322 VTRASGTLAYKRLIAIHNG--------KLKGCLKEELNLQLEKV-RRISLSEQKFEKAAV 372
+ A + + I G K + + E +L +K S+ E K +K
Sbjct: 358 SSPPPRKKAKVKKMKIAMGLSDLVIYTKSEKFVSFEHSLAHQKCYENNSIGELKAQKFVK 417
Query: 373 SYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMF 432
V T + I RIYPK TR SSNY P W G QMVALN Q G + L +G F
Sbjct: 418 HAANQFVSHTSRFITRIYPKGTRAGSSNYNPQEFWNVGCQMVALNFQTSGTPMELQNGKF 477
Query: 433 RANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWS 492
N GCGY+ KP FL + F+P L + + G L + +
Sbjct: 478 LDNGGCGYILKPEFLRNR---NSTFNPHNVGRYSNPLSLSIRLISGHQLPPSNLSKSNKA 534
Query: 493 PPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMP 551
P ++ I GVP D+ K KS+ K + +P WD+ F+F + +PE+AL+R V+
Sbjct: 535 DP--LVQLEIYGVPEDQAKRKSSVIKSNALSPRWDETFSFTVQVPELALIRFCVQDEISL 592
Query: 552 EKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596
++F GQ LP+ L G VPLF + G +L A L + +Y
Sbjct: 593 VANDFLGQYTLPLLSLSKGYCTVPLFSKSGGKLEPASLFVYVWYY 637
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. In vitro, hydrolyzes PtdIns(4,5)P2 in a Ca(2+)-dependent manner. Triggers intracellular Ca(2+) oscillations in oocytes solely during M phase and is involved in inducing oocyte activation and initiating embryonic development up to the blastocyst stage. Is therefore a strong candidate for the egg-activating soluble sperm factor that is transferred from the sperm into the egg cytoplasm following gamete membrane fusion. May exert an inhibitory effect on phospholipase-C-coupled processes that depend on calcium ions and protein kinase C, including CFTR trafficking and function. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 602 | ||||||
| 225434580 | 588 | PREDICTED: phosphoinositide phospholipas | 0.975 | 0.998 | 0.697 | 0.0 | |
| 397559805 | 586 | phospholipase C [Populus tomentosa] | 0.968 | 0.994 | 0.701 | 0.0 | |
| 359478839 | 583 | PREDICTED: phosphoinositide phospholipas | 0.966 | 0.998 | 0.692 | 0.0 | |
| 224059284 | 586 | predicted protein [Populus trichocarpa] | 0.968 | 0.994 | 0.694 | 0.0 | |
| 350535190 | 587 | PI-phospholipase C PLC4 [Solanum lycoper | 0.970 | 0.994 | 0.676 | 0.0 | |
| 145308221 | 588 | phosphoinositide-specific phospholipase | 0.968 | 0.991 | 0.662 | 0.0 | |
| 359478837 | 557 | PREDICTED: phosphoinositide phospholipas | 0.923 | 0.998 | 0.677 | 0.0 | |
| 2765140 | 588 | 1-phosphatidylinositol-4,5-bisphosphate | 0.968 | 0.991 | 0.661 | 0.0 | |
| 359478845 | 590 | PREDICTED: phosphoinositide phospholipas | 0.978 | 0.998 | 0.658 | 0.0 | |
| 1771381 | 588 | phosphoinositide-specific phospholipase | 0.968 | 0.991 | 0.661 | 0.0 |
| >gi|225434580|ref|XP_002278527.1| PREDICTED: phosphoinositide phospholipase C 4-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/595 (69%), Positives = 486/595 (81%), Gaps = 8/595 (1%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CF RK +V EA PP DVKE FKKYAEGGTHMTAEQL +FL+E Q G V
Sbjct: 1 MGSYRVC---MCFRRKFRVVEAEPPEDVKEAFKKYAEGGTHMTAEQLRRFLLESQSDGSV 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DAE+IV+QVLQ+ HHIA+FTR +LT++DFHH+LFSTDLN P+G+QV+QDM APLSHY
Sbjct: 58 TLSDAERIVEQVLQKRHHIAKFTRHNLTLDDFHHFLFSTDLNAPIGSQVHQDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYTGHNSYL GNQ SSDCSDVP+ KALKRGVRVIELD+WP+S K DV VLHGRTLTTPV
Sbjct: 118 FIYTGHNSYLTGNQLSSDCSDVPVIKALKRGVRVIELDIWPDSTKADVHVLHGRTLTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELIKCLR+IKE+AFSASPYPVI+T EDHL P LQAKVAQM+TQTF +L+ P+SECL+EF
Sbjct: 178 ELIKCLRSIKEHAFSASPYPVIITLEDHLTPDLQAKVAQMVTQTFQDILFYPKSECLQEF 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELKYRIIISTKPPKE E KG ++++ KGK S +DV G+EP ++TA+ ++++
Sbjct: 238 PSPEELKYRIIISTKPPKEYLEAKGSEDKENNIQKGKDSDDDVWGEEPSNITADHENNDK 297
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
SD SE ++ DED E D R G AYK LI+IH GK KG K+ L ++ KVRR+
Sbjct: 298 SD---SEGSEVDEDGEENND--CRPIGAPAYKHLISIHAGKPKGGFKDALKVEPNKVRRL 352
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SLSEQ EKA S+GTDVVRFTQKN LRIYPK TR NSSNYKP+IGW HGAQMVA NMQG
Sbjct: 353 SLSEQALEKATASHGTDVVRFTQKNFLRIYPKGTRFNSSNYKPLIGWTHGAQMVAFNMQG 412
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
YG+ LWLMHGMFRAN GCGYVKKP+FL+ GP++QVF+P+ KLPVKKTLKVK YMGDGW+
Sbjct: 413 YGRYLWLMHGMFRANGGCGYVKKPDFLMNVGPNNQVFNPRVKLPVKKTLKVKVYMGDGWH 472
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
LDFKQ +SPP FY RVGIAGVP D+ MK TK K D WTPVW++EF FPLT+PE+AL
Sbjct: 473 LDFKQTHFDLYSPPDFYARVGIAGVPGDEVMKKTKTKEDKWTPVWNEEFQFPLTVPELAL 532
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LRVEV +Y + EKD+FAGQTCLP+ +L+PGI AVPLF+RKGE SARLLMRFEF
Sbjct: 533 LRVEVHEYDLSEKDDFAGQTCLPISELKPGIRAVPLFNRKGEMFCSARLLMRFEF 587
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|397559805|gb|AFO54605.1| phospholipase C [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/596 (70%), Positives = 483/596 (81%), Gaps = 13/596 (2%)
Query: 2 GSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVS 61
GSY +C CFTRK KV +AGPP DV E F KY +GGTHM+AEQL +FLVEVQG GGVS
Sbjct: 3 GSYRMC---MCFTRKFKVTKAGPPHDVNEAFFKYTDGGTHMSAEQLRRFLVEVQGDGGVS 59
Query: 62 IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYF 121
DAE+IVDQVLQ+ HHIA+FTRR+LT++DFHHYLFS DLNPP+G+QV+QDMT PLSHYF
Sbjct: 60 TADAEKIVDQVLQKMHHIAKFTRRTLTLDDFHHYLFSADLNPPIGDQVHQDMTKPLSHYF 119
Query: 122 IYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVE 181
IYTGHNSYL GNQ SSDCSDVPI KALKRGVRVIELD+WPNS KD+V VLHGRTLT PVE
Sbjct: 120 IYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVIELDIWPNSTKDNVDVLHGRTLTAPVE 179
Query: 182 LIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFP 241
LI+CL++IKE AFS+SPYPVI+T EDHL P LQ KVAQMIT+TFG MLY PE ECL+EFP
Sbjct: 180 LIRCLKSIKEYAFSSSPYPVIITLEDHLTPDLQVKVAQMITETFGGMLYCPECECLEEFP 239
Query: 242 SPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERS 301
SPEELKYRIIISTKPPKE + +G ++ + S K K S +D GKEP DL ++Q D + S
Sbjct: 240 SPEELKYRIIISTKPPKEYLKAEGGKDKGNKSRKDKDSDDDTWGKEPLDLVSDQEDGDVS 299
Query: 302 DYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRIS 361
D DTSE + D ++ G AYKRLIAIH GK KG LKE L + KVRR+S
Sbjct: 300 DTDTSEDS----------DGESQQPGVSAYKRLIAIHAGKPKGGLKEALKVDPNKVRRLS 349
Query: 362 LSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGY 421
LSEQ EKA+ ++GTDV+RFTQKN+LR+YPK TR NSSNYKP+IGW HGAQMVA NMQGY
Sbjct: 350 LSEQALEKASENHGTDVIRFTQKNVLRVYPKGTRFNSSNYKPLIGWTHGAQMVAFNMQGY 409
Query: 422 GKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYL 481
G+ LWLM+GMFR+N GCG+VKKP+FL+KEGP +VF+PK K PVKK+LKVK YMGDGW+L
Sbjct: 410 GRYLWLMNGMFRSNGGCGFVKKPDFLMKEGPHGEVFNPKTKFPVKKSLKVKVYMGDGWHL 469
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALL 541
DFKQ +SPP FYTRVGIAGVP D MK TK K DNWTPVWD+EF F LT+PE+ALL
Sbjct: 470 DFKQTHFDSYSPPDFYTRVGIAGVPGDAIMKKTKIKEDNWTPVWDEEFIFLLTVPELALL 529
Query: 542 RVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
R+EV +Y M EKD+FAGQTCLPV +LR GI AVPLFDRKGE+L S+RLLMRFEF +
Sbjct: 530 RIEVHEYDMSEKDDFAGQTCLPVSELRSGIRAVPLFDRKGEKLNSSRLLMRFEFVQ 585
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478839|ref|XP_003632176.1| PREDICTED: phosphoinositide phospholipase C 4-like isoform 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/595 (69%), Positives = 481/595 (80%), Gaps = 13/595 (2%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CF RK +V EA PP DVKE FKKYAEGGTHMTAEQL +FL+E Q G V
Sbjct: 1 MGSYRVC---MCFRRKFRVVEAEPPEDVKEAFKKYAEGGTHMTAEQLRRFLLESQSDGSV 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DAE+IV+QVLQ+ HHIA+FTR +LT++DFHH+LFSTDLN P+G+QV+QDM APLSHY
Sbjct: 58 TLSDAERIVEQVLQKRHHIAKFTRHNLTLDDFHHFLFSTDLNAPIGSQVHQDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYTGHNSYL GNQ SSDCSDVP+ KALKRGVRVIELD+WP+S K DV VLHGRTLTTPV
Sbjct: 118 FIYTGHNSYLTGNQLSSDCSDVPVIKALKRGVRVIELDIWPDSTKADVHVLHGRTLTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELIKCLR+IKE+AFSASPYPVI+T EDHL P LQAKVAQM+TQTF +L+ P+SECL+EF
Sbjct: 178 ELIKCLRSIKEHAFSASPYPVIITLEDHLTPDLQAKVAQMVTQTFQDILFYPKSECLQEF 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELKYRIIISTKPPKE E KG ++++ KGK S +DV G+EP ++TA
Sbjct: 238 PSPEELKYRIIISTKPPKEYLEAKGSEDKENNIQKGKDSDDDVWGEEPSNITA------- 290
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
D++ ++ + DED E D R G AYK LI+IH GK KG K+ L ++ KVRR+
Sbjct: 291 -DHENNDKVEVDEDGEENND--CRPIGAPAYKHLISIHAGKPKGGFKDALKVEPNKVRRL 347
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SLSEQ EKA S+GTDVVRFTQKN LRIYPK TR NSSNYKP+IGW HGAQMVA NMQG
Sbjct: 348 SLSEQALEKATASHGTDVVRFTQKNFLRIYPKGTRFNSSNYKPLIGWTHGAQMVAFNMQG 407
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
YG+ LWLMHGMFRAN GCGYVKKP+FL+ GP++QVF+P+ KLPVKKTLKVK YMGDGW+
Sbjct: 408 YGRYLWLMHGMFRANGGCGYVKKPDFLMNVGPNNQVFNPRVKLPVKKTLKVKVYMGDGWH 467
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
LDFKQ +SPP FY RVGIAGVP D+ MK TK K D WTPVW++EF FPLT+PE+AL
Sbjct: 468 LDFKQTHFDLYSPPDFYARVGIAGVPGDEVMKKTKTKEDKWTPVWNEEFQFPLTVPELAL 527
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LRVEV +Y + EKD+FAGQTCLP+ +L+PGI AVPLF+RKGE SARLLMRFEF
Sbjct: 528 LRVEVHEYDLSEKDDFAGQTCLPISELKPGIRAVPLFNRKGEMFCSARLLMRFEF 582
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059284|ref|XP_002299806.1| predicted protein [Populus trichocarpa] gi|222847064|gb|EEE84611.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/596 (69%), Positives = 477/596 (80%), Gaps = 13/596 (2%)
Query: 2 GSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVS 61
GSY +C CFTRK KV EAGPP DV E F KY +GGTHM+AEQL +FL+EVQG GGVS
Sbjct: 3 GSYRMC---VCFTRKFKVTEAGPPPDVNEAFFKYTDGGTHMSAEQLRRFLMEVQGDGGVS 59
Query: 62 IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYF 121
I DAE+IVDQVLQ+ HHIA+FTRR+LT++DFHH+LFS DLNPP+G+QV+QDMT PLSHYF
Sbjct: 60 IADAEKIVDQVLQKLHHIAKFTRRTLTLDDFHHFLFSADLNPPVGDQVHQDMTKPLSHYF 119
Query: 122 IYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVE 181
IYTGHNSYL GNQ SSDCSDVPI KALKRGVRVIELD+WPN KD+V VLHGRTLT PVE
Sbjct: 120 IYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVIELDIWPNYTKDNVDVLHGRTLTAPVE 179
Query: 182 LIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFP 241
LI+CL++IKE AFS+SPYPVI+T EDHL P LQ KVAQMI +TFG MLYSPE ECL+EFP
Sbjct: 180 LIRCLKSIKEYAFSSSPYPVIITLEDHLTPDLQVKVAQMINETFGDMLYSPECECLEEFP 239
Query: 242 SPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERS 301
SPEELKYRIIISTKPPKE + + ++ S K K S +D GKEP DL ++Q D + S
Sbjct: 240 SPEELKYRIIISTKPPKEYLKAESGKDKGIKSRKDKDSDDDTWGKEPLDLVSDQEDGDVS 299
Query: 302 DYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRIS 361
D TSE + + E AYKRLIAIH GK KG LKE L + KVRR+S
Sbjct: 300 DTFTSEDSDGESQQPEVS----------AYKRLIAIHAGKPKGGLKEALKVDPNKVRRLS 349
Query: 362 LSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGY 421
LSEQ EKA+ ++GTDV+RFTQKN+LR+YPK TR NSSNYKP+IGW HGAQMVA NMQGY
Sbjct: 350 LSEQALEKASENHGTDVIRFTQKNVLRVYPKGTRFNSSNYKPLIGWTHGAQMVAFNMQGY 409
Query: 422 GKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYL 481
G+ LWLM+GMFR+N GCG+VKKP+FL+K GP +VF+PK K PVKK+LKVK YMGDGW+L
Sbjct: 410 GRYLWLMNGMFRSNGGCGFVKKPDFLMKGGPHGEVFNPKTKFPVKKSLKVKVYMGDGWHL 469
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALL 541
DFK +SPP FYTRVGIAGVP D MK TK K DNWTPVWD+EF F LT+PE+ALL
Sbjct: 470 DFKPTHFDSYSPPDFYTRVGIAGVPGDAIMKKTKIKEDNWTPVWDEEFIFQLTVPELALL 529
Query: 542 RVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
RVEV +Y M EKD+FAGQTCLPV +LRPGI AVPLFDRKGE+L S+RLLMRFEF +
Sbjct: 530 RVEVHEYDMSEKDDFAGQTCLPVSELRPGIRAVPLFDRKGEKLNSSRLLMRFEFVQ 585
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535190|ref|NP_001234181.1| PI-phospholipase C PLC4 [Solanum lycopersicum] gi|158827646|gb|ABW81000.1| PI-phospholipase C PLC4 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/597 (67%), Positives = 481/597 (80%), Gaps = 13/597 (2%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MG+Y +C CF+RK KV EA PP DVKE FKKY +GG M+AEQL +FL+EVQG +
Sbjct: 1 MGNYRVC---VCFSRKFKVTEAEPPTDVKEAFKKYGDGGNQMSAEQLLKFLIEVQGETQL 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DA+ +V Q+LQ+ H I + R++L ++DFHHYLFS DLNPP+ ++V DM APLSHY
Sbjct: 58 TVADADAVVRQILQKRHPITKLARQALALDDFHHYLFSADLNPPINSKVDHDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ +SDCSDVPI KALK+GVRVIELD+WPNS KDDV VLHGRT+TTPV
Sbjct: 118 FIFTGHNSYLTGNQLTSDCSDVPIIKALKKGVRVIELDIWPNSDKDDVHVLHGRTVTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELI+CL++IKE+AFSASPYPV++T EDHL P LQAKVAQM+T+TFG ML+ PES+ LKE
Sbjct: 178 ELIRCLKSIKEHAFSASPYPVVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKEC 237
Query: 241 PSPEELKYRIIISTKPPKERREKKG--INNRKDISAKGKISTEDVLGKEPPDLTANQADD 298
PSPEELK+RIIISTKPPKE E +R++ S + K S +DV G EP LTA+Q ++
Sbjct: 238 PSPEELKHRIIISTKPPKEYLEASASVCKDRRNSSQRSKDSEDDVWGSEPSSLTADQEEN 297
Query: 299 ERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVR 358
E+SD D S ED+ +A R AS AYKRLIAIH GK KG LKE L + +KVR
Sbjct: 298 EKSDSDKSY-----EDDDDATHRGHVAS---AYKRLIAIHAGKPKGGLKEALKIDPDKVR 349
Query: 359 RISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNM 418
R+SLSEQ EKAA S+GTD+VRFTQ+NILR+YPK TR NSSNYKP+IGW+HGAQMVA NM
Sbjct: 350 RLSLSEQALEKAAESHGTDIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAFNM 409
Query: 419 QGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478
QGYG++LWLMHGMFRAN GCGYVKKP+FLL GP+++VFDPK KLPVKKTLKVK YMGDG
Sbjct: 410 QGYGRALWLMHGMFRANGGCGYVKKPDFLLSIGPNNEVFDPKAKLPVKKTLKVKVYMGDG 469
Query: 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM 538
W+LDFKQ +SPP FYTRVGIAGVPAD+ MK TK K D WTPVWD+EFTFPLT+PE+
Sbjct: 470 WHLDFKQTHFDLYSPPDFYTRVGIAGVPADEVMKKTKTKEDKWTPVWDEEFTFPLTVPEL 529
Query: 539 ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
ALLR+EV +Y M EKD+FAGQTC+PV +L+PGIHAVPL +RKGE SARLLMRFEF
Sbjct: 530 ALLRIEVHEYDMSEKDDFAGQTCIPVSELKPGIHAVPLCNRKGEIYNSARLLMRFEF 586
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145308221|gb|ABP57375.1| phosphoinositide-specific phospholipase C [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/599 (66%), Positives = 477/599 (79%), Gaps = 16/599 (2%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CFTRK +V EA PP+DVKE FKKYAE G M +EQL +FL+EVQG +
Sbjct: 1 MGSYRVC---VCFTRKFRVTEAEPPSDVKEAFKKYAENGNQMNSEQLLKFLIEVQGETLL 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DA+ IV Q+LQ+ H I + TR++L +EDFHH+LFSTDLNPP+ +V+ DM APLSHY
Sbjct: 58 TVGDADAIVRQILQKRHPITKLTRQTLALEDFHHFLFSTDLNPPINYKVHHDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ +SDCSDVPI KALK+GVRVIELD+WPNS KDD+ VLHGRT+TTPV
Sbjct: 118 FIFTGHNSYLTGNQLTSDCSDVPIIKALKKGVRVIELDIWPNSDKDDIHVLHGRTVTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELI+CL++IKE+AF ASPYP+++T EDHL P LQAKVAQM+T+TFG ML+ PES+ LKE
Sbjct: 178 ELIRCLKSIKEHAFVASPYPLVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKEC 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINN----RKDISAKGKISTEDVLGKEPPDLTANQA 296
P+PEELK+RIIISTKPPKE E R++ S + S +DV G EP LTA+Q
Sbjct: 238 PTPEELKHRIIISTKPPKEYLEASASTTASKERRNSSQRSNCSEDDVWGTEPSSLTADQE 297
Query: 297 DDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEK 356
++E+SD D E DED++ R AYKRLIAIH GK KG LKE L + +K
Sbjct: 298 ENEKSDSDNFE----DEDDSNH-----RPQLASAYKRLIAIHAGKPKGGLKEALKVDPDK 348
Query: 357 VRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVAL 416
VRR+SLSEQ EKAA S+GT++VRFTQ+NILR+YPK TR NSSNYKP+IGW+HGAQMVA
Sbjct: 349 VRRLSLSEQALEKAAESHGTEIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAF 408
Query: 417 NMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMG 476
NMQGYG++LWLMHGMFR+N GCGYVKKP+FLL GP+++VFDPK KLPVK TLKVK YMG
Sbjct: 409 NMQGYGRALWLMHGMFRSNGGCGYVKKPDFLLNVGPNNEVFDPKAKLPVKITLKVKVYMG 468
Query: 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP 536
DGW+LDFKQ +SPP FYTRVGIAGVPAD+ MK TK K D WTPVWD+EFTFPLT+P
Sbjct: 469 DGWHLDFKQTHFDLYSPPDFYTRVGIAGVPADEIMKKTKTKEDKWTPVWDEEFTFPLTVP 528
Query: 537 EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
E+ALLR+E +Y M EKD+FAGQTC+P+ +L+PGIHAVPL DRKGE+ SARLLMRFEF
Sbjct: 529 ELALLRIEAHEYDMSEKDDFAGQTCIPISELKPGIHAVPLCDRKGEKFSSARLLMRFEF 587
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478837|ref|XP_003632175.1| PREDICTED: phosphoinositide phospholipase C 4-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/595 (67%), Positives = 467/595 (78%), Gaps = 39/595 (6%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CF RK +V EA PP DVKE FKKYAEGGTHMTAEQL +FL+E Q G V
Sbjct: 1 MGSYRVC---MCFRRKFRVVEAEPPEDVKEAFKKYAEGGTHMTAEQLRRFLLESQSDGSV 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DAE+IV+QVLQ+ HHIA+FTR +LT++DFHH+LFSTDLN P+G+QV+QDM APLSHY
Sbjct: 58 TLSDAERIVEQVLQKRHHIAKFTRHNLTLDDFHHFLFSTDLNAPIGSQVHQDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYTGHNSYL GNQ SSDCSDVP+ KALKRGVRVIELD+WP+S K DV VLHGRTLTTPV
Sbjct: 118 FIYTGHNSYLTGNQLSSDCSDVPVIKALKRGVRVIELDIWPDSTKADVHVLHGRTLTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELIKCLR+IKE+AFSASPYPVI+T EDHL P LQAKVAQM+TQTF +L+ P+SECL+EF
Sbjct: 178 ELIKCLRSIKEHAFSASPYPVIITLEDHLTPDLQAKVAQMVTQTFQDILFYPKSECLQEF 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELKYRIIISTKPPKE E KG ++++ KGK S +DV G+EP ++TA
Sbjct: 238 PSPEELKYRIIISTKPPKEYLEAKGSEDKENNIQKGKDSDDDVWGEEPSNITAE------ 291
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
YK LI+IH GK KG K+ L ++ KVRR+
Sbjct: 292 ------------------------------YKHLISIHAGKPKGGFKDALKVEPNKVRRL 321
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SLSEQ EKA S+GTDVVRFTQKN LRIYPK TR NSSNYKP+IGW HGAQMVA NMQG
Sbjct: 322 SLSEQALEKATASHGTDVVRFTQKNFLRIYPKGTRFNSSNYKPLIGWTHGAQMVAFNMQG 381
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
YG+ LWLMHGMFRAN GCGYVKKP+FL+ GP++QVF+P+ KLPVKKTLKVK YMGDGW+
Sbjct: 382 YGRYLWLMHGMFRANGGCGYVKKPDFLMNVGPNNQVFNPRVKLPVKKTLKVKVYMGDGWH 441
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
LDFKQ +SPP FY RVGIAGVP D+ MK TK K D WTPVW++EF FPLT+PE+AL
Sbjct: 442 LDFKQTHFDLYSPPDFYARVGIAGVPGDEVMKKTKTKEDKWTPVWNEEFQFPLTVPELAL 501
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LRVEV +Y + EKD+FAGQTCLP+ +L+PGI AVPLF+RKGE SARLLMRFEF
Sbjct: 502 LRVEVHEYDLSEKDDFAGQTCLPISELKPGIRAVPLFNRKGEMFCSARLLMRFEF 556
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2765140|emb|CAA72681.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/599 (66%), Positives = 477/599 (79%), Gaps = 16/599 (2%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CFTRK +V EA PP+DVKE FKKYAE G M +EQL +FL+EVQG
Sbjct: 1 MGSYRVC---VCFTRKFRVTEAEPPSDVKEAFKKYAENGNQMNSEQLLKFLIEVQGETLF 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ D++ IV Q+LQ+ H I + TR++L +EDFHH+LF+TDLNPP+ +V+ DM APLSHY
Sbjct: 58 TVGDSDVIVRQILQKRHPITKLTRQTLALEDFHHFLFNTDLNPPINYKVHHDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ +SDCSDVPI KALK+GVRVIELD+WPNS KDD+ VLHGRT+TTPV
Sbjct: 118 FIFTGHNSYLTGNQLTSDCSDVPIIKALKKGVRVIELDIWPNSDKDDIHVLHGRTVTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELI+CL++IKE+AF ASPYPV++T EDHL P LQAKVAQM+T+TFG ML+ PES+ LKE
Sbjct: 178 ELIRCLKSIKEHAFVASPYPVVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKEC 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINN----RKDISAKGKISTEDVLGKEPPDLTANQA 296
P+PEELK+RII+STKPPKE E R++ S + S +DV G EP LTA+Q
Sbjct: 238 PTPEELKHRIIVSTKPPKEYLEASASTTVSKERRNSSQRSNCSEDDVWGTEPSSLTADQE 297
Query: 297 DDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEK 356
++E+SD D E DED+ C+ R AYKRLIAIH GK KG LKE L + +K
Sbjct: 298 ENEKSDSDNFE----DEDD---CNH--RPQFASAYKRLIAIHAGKPKGGLKEALKVDPDK 348
Query: 357 VRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVAL 416
VRR+SLSEQ EKAA S+GT++VRFTQ+NILR+YPK TR NSSNYKP+IGW+HGAQMVA
Sbjct: 349 VRRLSLSEQALEKAAESHGTEIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAF 408
Query: 417 NMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMG 476
NMQGYG++LWLMHGMFR+N GCGYVKKP+FLL GP+++VFDPK KLPVKKTLKVK YMG
Sbjct: 409 NMQGYGRALWLMHGMFRSNGGCGYVKKPDFLLNVGPNNEVFDPKAKLPVKKTLKVKVYMG 468
Query: 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP 536
DGW+LDFKQ +SPP FYTRVGIAGVPAD+ MK TK K D WTPVWD+ FTFPLT+P
Sbjct: 469 DGWHLDFKQTHFDLYSPPDFYTRVGIAGVPADEIMKKTKTKEDKWTPVWDEAFTFPLTVP 528
Query: 537 EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
E+ALLR+EV +Y M EKD+FAGQTC+P+ +L+PGIHAVPL DRKGE+ S RLLMRFEF
Sbjct: 529 ELALLRIEVHEYDMSEKDDFAGQTCIPISELKPGIHAVPLCDRKGEKYSSVRLLMRFEF 587
|
Source: Nicotiana rustica Species: Nicotiana rustica Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478845|ref|XP_002278839.2| PREDICTED: phosphoinositide phospholipase C 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/595 (65%), Positives = 470/595 (78%), Gaps = 6/595 (1%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CF RK ++ EA PP DVKE F++Y EGGTHMTAEQL +FLVE Q
Sbjct: 1 MGSYSVC---ICFKRKFRLTEAEPPTDVKEAFRRYTEGGTHMTAEQLLRFLVEGQNDVAA 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
+I DAE+I++ VL R HH+ +F R +LT++DFHH+LFSTDLN P+G+QV+QDM+APLSHY
Sbjct: 58 TISDAERILELVLHRRHHVTKFARTTLTLDDFHHFLFSTDLNGPIGSQVHQDMSAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYTGHNSYL GNQ +S+CSDVPI KALKRGVR++ELDLWP S K++V VLHGRTLTTPV
Sbjct: 118 FIYTGHNSYLTGNQLNSNCSDVPIVKALKRGVRMVELDLWPGSTKENVHVLHGRTLTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELIKCL++IKE+AFSASPYPVI+T EDHL P LQAKVAQMI+QTFG ML+ P+SE L EF
Sbjct: 178 ELIKCLKSIKEHAFSASPYPVIITLEDHLTPDLQAKVAQMISQTFGDMLFYPKSESLPEF 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELKYR+IISTKPPKE E K ++ + S KGK S EDV K PPDLT + +++
Sbjct: 238 PSPEELKYRVIISTKPPKEYLEAKSSEDKVNNSQKGKDSDEDVSMKVPPDLTVDHESNDK 297
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI 360
SD SE + ++++ + CDR A AYK LIAIH K G LK L ++ KV R+
Sbjct: 298 SDSGRSEGSSENDESNDECDRPLEAP---AYKHLIAIHAAKPSGGLKASLKVEPNKVSRL 354
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SL+EQ F KA + DVVRFTQKN+LR+YPK TR NSSNYKP+IGW+HG Q++A NMQG
Sbjct: 355 SLNEQAFGKAIAYHRRDVVRFTQKNLLRVYPKATRFNSSNYKPLIGWMHGVQLLAFNMQG 414
Query: 421 YGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480
+G+SLWLMHGMFRAN GCGYVKKP+FLL P +QVFDPK KLPVKKTLKV+ Y+GDGW
Sbjct: 415 HGRSLWLMHGMFRANGGCGYVKKPDFLLNVSPHNQVFDPKAKLPVKKTLKVRVYLGDGWN 474
Query: 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540
DFK+ F+SPP FYTRVGIAG ADK MK TKKK +NW PVW++EFTFPLT+PE+AL
Sbjct: 475 FDFKKTHFDFYSPPDFYTRVGIAGAAADKTMKETKKKQNNWKPVWNEEFTFPLTVPELAL 534
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LR+EV +Y+MPEKD FAGQTCLPV++LR GI AVPLF+RKGE S RLLM F+F
Sbjct: 535 LRIEVYEYNMPEKDMFAGQTCLPVWELRQGIRAVPLFNRKGEMYSSVRLLMSFQF 589
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1771381|emb|CAA65127.1| phosphoinositide-specific phospholipase C [Nicotiana rustica] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/599 (66%), Positives = 473/599 (78%), Gaps = 16/599 (2%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY +C CFTRK +V EA PP+DVKE FKKYAE G M +EQL +FL+EVQG
Sbjct: 1 MGSYRVC---VCFTRKFRVTEAEPPSDVKEAFKKYAENGNQMNSEQLLKFLIEVQGETLF 57
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ DA+ IV Q+LQ+ H I + TR++L +EDFHH+LF+TDLNPP+ +V+ DM APLSHY
Sbjct: 58 TVGDADVIVRQILQKRHPITKLTRQTLALEDFHHFLFNTDLNPPINYKVHHDMNAPLSHY 117
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ +SDCSD+PI KALK+GVRVIELD+WPNS KDD+ VLHGRT+TTPV
Sbjct: 118 FIFTGHNSYLTGNQLTSDCSDIPIIKALKKGVRVIELDIWPNSDKDDIHVLHGRTVTTPV 177
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
ELI+CL++IKE+AF ASPYPV++T EDHL P LQAKVAQM+T+TFG ML+ PES+ LKE
Sbjct: 178 ELIRCLKSIKEHAFVASPYPVVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKEC 237
Query: 241 PSPEELKYRIIISTKPPKERREKKGINN----RKDISAKGKISTEDVLGKEPPDLTANQA 296
P+PEELK+RIIISTKPPKE E R++ S + S +DV G EP LTANQ
Sbjct: 238 PTPEELKHRIIISTKPPKEYLEASASTTASKERRNSSQRSNCSEDDVWGAEPSSLTANQE 297
Query: 297 DDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEK 356
++E+SD D + D R AYKRLIAIH GK KG LKE L + +K
Sbjct: 298 ENEKSDSDNF---------EDDDDSSHRPQLASAYKRLIAIHAGKPKGGLKEALKVDPDK 348
Query: 357 VRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVAL 416
VRR+SLSEQ EKAA S+GT++VRFTQ+NILR+YPK TR NSSNYKP+IGW+HGAQMVA
Sbjct: 349 VRRLSLSEQALEKAAESHGTEIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAF 408
Query: 417 NMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMG 476
NMQGYG++LWLMHGMF +N GCGYVKKP+FLL GP+++VFDPK KLPVKKTLKVK YMG
Sbjct: 409 NMQGYGRALWLMHGMFSSNGGCGYVKKPDFLLNVGPNNEVFDPKAKLPVKKTLKVKVYMG 468
Query: 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP 536
DGW+LDFKQ +SPP FYTRVGIAGVPAD+ MK TK K D WTPVWD+EFTFPLT+P
Sbjct: 469 DGWHLDFKQTHFDLYSPPDFYTRVGIAGVPADEIMKKTKTKEDKWTPVWDEEFTFPLTVP 528
Query: 537 EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
E+ALLR+EV +Y M EKD+FAGQTC+PV +L+PGIHAVPL DRKGE+ SARLLMRFEF
Sbjct: 529 ELALLRIEVHEYDMSEKDDFAGQTCIPVSELKPGIHAVPLCDRKGEKYSSARLLMRFEF 587
|
Source: Nicotiana rustica Species: Nicotiana rustica Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 602 | ||||||
| TAIR|locus:2178848 | 597 | PLC4 "phosphatidylinositol-spe | 0.978 | 0.986 | 0.600 | 8.6e-191 | |
| TAIR|locus:504956034 | 613 | AT2G40116 [Arabidopsis thalian | 0.945 | 0.928 | 0.579 | 8.7e-182 | |
| TAIR|locus:2178833 | 578 | PLC5 "phosphatidylinositol-spe | 0.551 | 0.574 | 0.536 | 4.4e-180 | |
| TAIR|locus:2103437 | 581 | PLC2 "phospholipase C 2" [Arab | 0.941 | 0.975 | 0.546 | 1.3e-169 | |
| TAIR|locus:2082018 | 584 | AT3G55940 [Arabidopsis thalian | 0.953 | 0.982 | 0.525 | 1.9e-161 | |
| TAIR|locus:2178803 | 561 | PLC1 "phospholipase C1" [Arabi | 0.526 | 0.565 | 0.481 | 3.4e-141 | |
| TAIR|locus:2121239 | 564 | PLC1 "phospholipase C1" [Arabi | 0.440 | 0.469 | 0.509 | 1.8e-133 | |
| TAIR|locus:2099530 | 531 | PLC8 "phosphatidylinositol-spe | 0.418 | 0.474 | 0.449 | 2.5e-104 | |
| TAIR|locus:2075696 | 531 | PLC9 "AT3G47220" [Arabidopsis | 0.365 | 0.414 | 0.515 | 4.6e-101 | |
| UNIPROTKB|Q2VRL0 | 637 | PLCZ1 "1-phosphatidylinositol | 0.916 | 0.866 | 0.307 | 4e-58 |
| TAIR|locus:2178848 PLC4 "phosphatidylinositol-speciwc phospholipase C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1849 (655.9 bits), Expect = 8.6e-191, P = 8.6e-191
Identities = 358/596 (60%), Positives = 437/596 (73%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
MGSY C + FTRK ++ E+GP DV+++F+KY EG HM+ EQL + + E G G
Sbjct: 7 MGSYKFCLI---FTRKFRMTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGET 63
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
S+E+AE+IVD+VL+R HHIA+FTRR+LT++DF++YLFSTDLNPP+ +QV+Q+M APLSHY
Sbjct: 64 SLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQVHQNMDAPLSHY 123
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FI+TGHNSYL GNQ SS+CS++PI AL+RGVRV+ELDLWP DDV V HGRTLT V
Sbjct: 124 FIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEV 182
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
+L KCL +IK NAF+ S YPVI+T EDHL P LQ KVA+MITQTFG MLY +S+ +EF
Sbjct: 183 KLGKCLESIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEF 242
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDER 300
PSPEELK +I+ISTKPPKE E KD KGK S EDV GKEP DL + Q+D ++
Sbjct: 243 PSPEELKEKILISTKPPKEYLEAND-TKEKDNGEKGKDSDEDVWGKEPEDLISTQSDLDK 301
Query: 301 SDYDTSEHNQCDEDNTEACDRVTRAS-GTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRR 359
++ NQ DE+ +C+ T YKRLIAIH GK KG L+ L + K+RR
Sbjct: 302 VTSSVNDLNQDDEERG-SCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRR 360
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
+SLSEQ EKA SYG DV+RFTQKN LRIYPK TR NSSNYKP IGW+ GAQM+A NMQ
Sbjct: 361 LSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ 420
Query: 420 GYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGW 479
GYG++LWLM GMFRAN GCGYVKKP+FL+ P+ Q F PK+ KKTLKVK MGDGW
Sbjct: 421 GYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGW 480
Query: 480 YLDFKQMDCKFWSPPQFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPLTIPEMA 539
LDFK+ +SPP F+ RVGIAG P D D WTP+W+ EFTFPL +PE+A
Sbjct: 481 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELA 540
Query: 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
LLRVEV ++ + EKD+F GQTCLPV ++R GI AVPLF+RKG + S RLLMRFEF
Sbjct: 541 LLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEF 596
|
|
| TAIR|locus:504956034 AT2G40116 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1764 (626.0 bits), Expect = 8.7e-182, P = 8.7e-182
Identities = 349/602 (57%), Positives = 434/602 (72%)
Query: 13 FTRKHKVAEAGPPADVKEMFKKYAEGG----TH------------MTAEQLWQFLVEVQG 56
+ RK K+ E P DV++ F ++A GG T M AEQL FL +
Sbjct: 25 YNRKFKINEVTPTDDVRDAFCQFAVGGGGGGTDGDSSDGDGSTGVMGAEQLCSFLDD--- 81
Query: 57 HG-GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTA 115
HG ++ +A++++D+V++R HH+ RFTR L ++DF ++LF DLNPP+ V+QDMTA
Sbjct: 82 HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPITPHVHQDMTA 141
Query: 116 PLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175
PLSHYFIYTGHNSYL GNQ SSDCS+VP+ KAL+RGVRVIELDLWPNS D+ VLHGRT
Sbjct: 142 PLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDINVLHGRT 201
Query: 176 LTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE 235
LTTPV L+KCL++I++ AFS+SPYPVI+T EDHL P LQAKVA+M TQ FG MLY PES+
Sbjct: 202 LTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESD 261
Query: 236 CLKEFPSPEELKYRIIISTKPPKERREKKG-INNRKDISAKGKISTEDVLGKEPPDLTAN 294
L EFPSP L +RIIISTKPPKE E + I +KD + S+ED E P
Sbjct: 262 SLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSP--SSED----ETPRTEEI 315
Query: 295 QA-DDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQ 353
Q + D D + D+++ EA + AYKRLI IH GK KG +KEE+ +
Sbjct: 316 QTLESMLFDQDFESKSDSDQEDEEASE-----DQKPAYKRLITIHAGKPKGTVKEEMKVV 370
Query: 354 LEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQM 413
++KVRR+SLSEQ+ ++ S DVVRFTQ+N+LRIYPK TR NSSNYKP+IGW HGAQM
Sbjct: 371 VDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGAQM 430
Query: 414 VALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKA 473
+A NMQGYGKSLWLMHGMFRAN GCGYVKKPNFL+K+G D+VFDP++KLPVK+TLKVK
Sbjct: 431 IAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKVKV 490
Query: 474 YMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPL 533
YMGDGW +DF +SPP FYT++ I GVPAD DNW P+WD+EF+FPL
Sbjct: 491 YMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSFPL 550
Query: 534 TIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRF 593
T+PE+ALLR+EVR+Y M EKD+F GQTCLPV +LRPGI +VPL+D+KGE++ S RLLMRF
Sbjct: 551 TVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLMRF 610
Query: 594 EF 595
F
Sbjct: 611 IF 612
|
|
| TAIR|locus:2178833 PLC5 "phosphatidylinositol-speciwc phospholipase C5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 922 (329.6 bits), Expect = 4.4e-180, Sum P(2) = 4.4e-180
Identities = 183/341 (53%), Positives = 230/341 (67%)
Query: 257 PKERREKKGINNR--KDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDED 314
P++ + K I+ + K K K S D GK D++A DDE+++ +TSE +ED
Sbjct: 244 PEDLKYKIVISTKPPKGSLRKDKDSESDASGKASSDVSA---DDEKTEEETSEAKN-EED 299
Query: 315 NTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSY 374
D+ + L Y RLI I +G K LKE L + VRR+SL EQKF+KA Y
Sbjct: 300 GF---DQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQKFKKATEMY 356
Query: 375 GTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRA 434
GT+V++FTQKN+LRIYPK TRVNSSNY+P GW++GAQMVA NMQGYG++LW+MHGMFR
Sbjct: 357 GTEVIKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYGRALWMMHGMFRG 416
Query: 435 NAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPP 494
N GCGYVKKP+F++ +VF+PK KLP+KKTLKVK YMG GW F++ WS P
Sbjct: 417 NGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSP 476
Query: 495 QFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKD 554
FYTRVGI GV D W P W++EF F LT+PE+ALLR+EV Y+MPEKD
Sbjct: 477 NFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEVHDYNMPEKD 536
Query: 555 EFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
+F+GQTCLPV +LR GI +VPL+DRKGE L S LLMRF F
Sbjct: 537 DFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHF 577
|
|
| TAIR|locus:2103437 PLC2 "phospholipase C 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1649 (585.5 bits), Expect = 1.3e-169, P = 1.3e-169
Identities = 321/587 (54%), Positives = 408/587 (69%)
Query: 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQ 71
CF R+ + + P ++K +F+KY+E G MT + L +FL++VQ + EDA+ I++
Sbjct: 11 CFRRRFRYTASEAPREIKTIFEKYSENGV-MTVDHLHRFLIDVQKQDKATREDAQSIINS 69
Query: 72 VLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLG-NQVYQDMTAPLSHYFIYTGHNSYL 130
H R L ++ F YLF D NPPL ++V+ DM AP+SHYFI+TGHNSYL
Sbjct: 70 ASSLLH------RNGLHLDAFFKYLFG-DNNPPLALHKVHHDMDAPISHYFIFTGHNSYL 122
Query: 131 IGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190
GNQ SSDCS+VPI ALK+GVRVIELD+WPNS KDD+ VLHG TLTTPV LIKCL+AI+
Sbjct: 123 TGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGLIKCLKAIR 182
Query: 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE-SECLKEFPSPEELKYR 249
+AF S YPV++T EDHL P LQ+KVA+M+T+ FG +L++P E LKEFPSP LK R
Sbjct: 183 AHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFPSPNSLKRR 242
Query: 250 IIISTKPPKERREKKGINNRKDISAKGK-ISTEDVLGKEPPDLTANQADDERSDYDTSEH 308
IIISTKPPKE +E K + ++ KGK + E+V G+E P + + D D ++
Sbjct: 243 IIISTKPPKEYKEGKDV----EVVQKGKDLGDEEVWGREVPSFIQRNKSEAKDDLDGNDD 298
Query: 309 NQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFE 368
+ D+D+ E D+ ++ + YK LIAIH GK KG + E L + +KVRR+SLSE++ E
Sbjct: 299 D--DDDDDE--DK-SKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLE 353
Query: 369 KAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428
KAA Y +VRFTQ N+LRIYPK TRV SSNY P++GW HGAQMVA NMQGYG+SLWLM
Sbjct: 354 KAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLM 413
Query: 429 HGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDC 488
GMFRAN GCGY+KKP+ LLK G D +FDPK LPVK TL+V YMG+GWY DF+
Sbjct: 414 QGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTVYMGEGWYFDFRHTHF 473
Query: 489 KFWSPPQFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548
+SPP FYTRVGIAGVP D DNW P WD+ F FPLT+PE+ALLR+EV +Y
Sbjct: 474 DQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEY 533
Query: 549 SMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
M EKD+F GQTCLPV++L GI A PL RKGE+ S +LL++ EF
Sbjct: 534 DMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEF 580
|
|
| TAIR|locus:2082018 AT3G55940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1572 (558.4 bits), Expect = 1.9e-161, P = 1.9e-161
Identities = 314/598 (52%), Positives = 411/598 (68%)
Query: 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSI 62
+Y +C CF R+++ + PA++K +F Y++ G MT + L +FL++VQ +
Sbjct: 5 TYKVC---FCFRRRYRHTVSVAPAEIKTLFDNYSDKGL-MTTDLLLRFLIDVQKQDKATK 60
Query: 63 EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGN-QVYQDMTAPLSHYF 121
E+A+ IV+ H R L ++ F YLF+ N PL + +V+QDM APLSHYF
Sbjct: 61 EEAQDIVNASSSLLH------RNGLHLDAFFKYLFAVT-NSPLSSLEVHQDMDAPLSHYF 113
Query: 122 IYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVE 181
IYTGHNSYL GNQ SSDCS++PI +ALK+GVRVIELD+WPNS +D + VLHGRTLT+PVE
Sbjct: 114 IYTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVE 173
Query: 182 LIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEF 240
LIKCLRAI+E+AF S YPV++T EDHL P LQAKVA+M+T FG ML++P S ECLKEF
Sbjct: 174 LIKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEF 233
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGK-ISTEDVLGKEPPDLTANQADDE 299
PSP LK RI+ISTKPPKE K ++ D+ KG+ + ++V G+E P +
Sbjct: 234 PSPAFLKKRIMISTKPPKEY--KAATDD--DLVKKGRDLGDKEVWGREVPSFIRRDRSVD 289
Query: 300 RSDY--DTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKV 357
++D D + + D+D+ + D++ + + YK LIAI GK KG + E L + +KV
Sbjct: 290 KNDSNGDDDDDDDDDDDDDDGDDKIKK-NAPPEYKHLIAIEAGKPKGGITECLKVDPDKV 348
Query: 358 RRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALN 417
RR+SLSE++ EKA+ Y +VRFTQ+N+LR+YPK TR+ SSNY P+I W HGAQMVA N
Sbjct: 349 RRLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFN 408
Query: 418 MQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGD 477
MQG G+SLW+M GMFR N GCGY+KKP+ LLK + VFDP+ LPVK TL+V YMG+
Sbjct: 409 MQGLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLPVKTTLRVTIYMGE 465
Query: 478 GWYLDFKQMDCKFWSPPQFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPLTIPE 537
GWY DF +SPP FYTRVGIAGVPAD DNW P WD+ F FPLT+PE
Sbjct: 466 GWYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPE 525
Query: 538 MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
+ALLR+EV +Y M EKD+F GQ CLPV++LR GI AVPL ++ G + S +LL+R EF
Sbjct: 526 LALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEF 583
|
|
| TAIR|locus:2178803 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 783 (280.7 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 155/322 (48%), Positives = 201/322 (62%)
Query: 273 SAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYK 332
S K KI ++ +PP + S D S + D E S + Y+
Sbjct: 239 SLKNKI----LISTKPPKEYLQTQISKGSTTDESTRAKKISDAEEQVQEEDEESVAIEYR 294
Query: 333 RLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPK 392
LI+IH G KG LK LN +V R+S+SEQ E A + G D+V+FTQ+N+LRI+PK
Sbjct: 295 DLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVKFTQRNLLRIFPK 354
Query: 393 QTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGP 452
TR +SSNY P++GWIHGAQMVA NMQ +G+ LW+M GMF+AN GCGYVKKP+ LL GP
Sbjct: 355 TTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLWMMQGMFKANGGCGYVKKPDVLLSNGP 414
Query: 453 DDQVFDP-KEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADXXX 511
+ ++FDP + LP+K TLKVK Y G+GW +DF +SPP FY +VGIAGVP D
Sbjct: 415 EGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPLDHFDRYSPPDFYAKVGIAGVPLDTAS 474
Query: 512 XXXXXXVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571
D W P+WD EF FPL +PE++LL + V+ Y +++FAGQTC P+ ++RPGI
Sbjct: 475 YRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITVKDYDSNTQNDFAGQTCFPLSEVRPGI 534
Query: 572 HAVPLFDRKGEELGSARLLMRF 593
AV L DR GE RLLMRF
Sbjct: 535 RAVRLHDRAGEVYKHVRLLMRF 556
|
|
| TAIR|locus:2121239 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 712 (255.7 bits), Expect = 1.8e-133, Sum P(2) = 1.8e-133
Identities = 137/269 (50%), Positives = 179/269 (66%)
Query: 326 SGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKN 385
S + Y+ LIAIH K K+ L+ EK R+S+ EQ + + GTD+VRFTQ+N
Sbjct: 290 SEAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWLDTMVRTRGTDLVRFTQRN 349
Query: 386 ILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPN 445
++RIYPK TRV+SSNY P +GW HGAQMVA NMQG+GK LW+M GMFR N GCGYVKKP
Sbjct: 350 LVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRGNGGCGYVKKPR 409
Query: 446 FLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGV 505
LL E +FDP ++ P+K TLKVK Y G+GW LDF +SPP F+ ++GIAGV
Sbjct: 410 ILLDE---HTLFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQYSPPDFFVKIGIAGV 466
Query: 506 PADXXXXXXXXXVDNWTPVW-DDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPV 564
P D VD W P+W +DEF F L++PE+ALL +V+ Y +++FAGQTCLP+
Sbjct: 467 PRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYDNDTQNDFAGQTCLPL 526
Query: 565 FQLRPGIHAVPLFDRKGEELGSARLLMRF 593
+L+ G+ AV L DR G+ + RLL+ F
Sbjct: 527 PELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
|
|
| TAIR|locus:2099530 PLC8 "phosphatidylinositol-speciwc phospholipase C8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 119/265 (44%), Positives = 157/265 (59%)
Query: 331 YKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIY 390
Y+ L++ H + +G L+ L + K++R Y TD++ FTQK LR
Sbjct: 279 YQSLVSFHVVEPRGMLQNVLTGKANKIQRPGW-----------YETDIISFTQKRFLRTR 327
Query: 391 PKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKE 450
P++ + + YKP W+HGAQ++AL+ + + LWLM GMFRAN GCGYVKKP+FLL
Sbjct: 328 PQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGGCGYVKKPDFLLNA 387
Query: 451 GPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADXX 510
GP VF P V K LKVK YMGDGW +DFK+ + S P Y R+ IAGVP D
Sbjct: 388 GPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDFKKRIGRL-SKPDLYVRISIAGVPHDEN 445
Query: 511 XXXXXXXVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG 570
+ WTP W +EFTFPLT P++AL+ EV Y + D F GQTCLPV +L G
Sbjct: 446 IMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSELIEG 505
Query: 571 IHAVPLFDRKGEELGSARLLMRFEF 595
I AVPL+D +G+ S LL RF++
Sbjct: 506 IRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| TAIR|locus:2075696 PLC9 "AT3G47220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 115/223 (51%), Positives = 139/223 (62%)
Query: 374 YGTDVVRFTQKNILRIYPKQTRVNSSN-YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMF 432
Y DV+ FTQ LR PK+ + S+ YKP W+HGAQM+AL+ Q + LWLM GMF
Sbjct: 310 YERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEKLWLMQGMF 369
Query: 433 RANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWS 492
RAN GCGYVKKPNFLL G VF P E V KTLKVK YMGDGW +DFK+ + S
Sbjct: 370 RANGGCGYVKKPNFLLNAGSSG-VFYPTENPVVVKTLKVKIYMGDGWIVDFKKRIGRL-S 427
Query: 493 PPQFYTRVGIAGVPADXXXXXXXXXVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPE 552
P Y R+ IAGVP D + W P W +EFTFPLT P++AL+ EV Y +
Sbjct: 428 KPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVST 487
Query: 553 KDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
D F GQTCLPV +L GI AVPL+D +G+ S LL RF++
Sbjct: 488 PDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| UNIPROTKB|Q2VRL0 PLCZ1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 177/576 (30%), Positives = 261/576 (45%)
Query: 30 EMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFT-RRSLT 88
E+F Y+E ++ +L FL + Q E AE +V+ ++ I RR L+
Sbjct: 77 EIFCAYSENRKNLADTELTAFLKKEQ----FKTEGAETTALEVILKYEPIDEVRKRRQLS 132
Query: 89 VEDFHHYLFSTDLN--PPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVP-IT 145
E F Y+ S D VYQDM PL YFI + HN+YL+ +Q SD+
Sbjct: 133 FEGFIRYMSSEDCTIFKKEHRTVYQDMNHPLCDYFISSSHNTYLVSDQLIGP-SDLNGYI 191
Query: 146 KALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTF 205
AL +G R +E+D W S D V V HG TLT+ + + + + AF+AS YPV+L+
Sbjct: 192 SALLKGCRCLEIDCWDGSNNDPV-VYHGHTLTSKITFCSVIHVVDKYAFAASDYPVVLSL 250
Query: 206 EDHLNPHLQAKVAQMITQTFG-AMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERREK 263
E+H + Q ++AQ + G +L SP + + + PSPE LK++I++ K E
Sbjct: 251 ENHCSTKQQERIAQYLLNILGDKLLTSPIGDIEVTQLPSPEALKFKILVKNKKCGTIEET 310
Query: 264 KGINNRKDISAKGKISTEDVLGK-EPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRV 322
R G++S E++ E D S SE +A +V
Sbjct: 311 MLRKGRDSHGETGEVSEEEITSSDEETDEKTPLYPKSGSSKRKSEGRSSPPPRKKA--KV 368
Query: 323 TRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKV-RRISLSEQKFEKAAVSYGTDVVRF 381
+ + L+ I+ K + + E +L +K S+ E K +K V
Sbjct: 369 KKMKIAMGLSDLV-IYT-KSEKFVSFEHSLAHQKCYENNSIGELKAQKFVKHAANQFVSH 426
Query: 382 TQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYV 441
T + I RIYPK TR SSNY P W G QMVALN Q G + L +G F N GCGY+
Sbjct: 427 TSRFITRIYPKGTRAGSSNYNPQEFWNVGCQMVALNFQTSGTPMELQNGKFLDNGGCGYI 486
Query: 442 KKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVG 501
KP FL + F+P L + + G L + + P ++
Sbjct: 487 LKPEFLRNR---NSTFNPHNVGRYSNPLSLSIRLISGHQLPPSNLSKSNKADP--LVQLE 541
Query: 502 IAGVPADXXXXXXXXXVDN-WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQT 560
I GVP D N +P WD+ F+F + +PE+AL+R V+ ++F GQ
Sbjct: 542 IYGVPEDQAKRKSSVIKSNALSPRWDETFSFTVQVPELALIRFCVQDEISLVANDFLGQY 601
Query: 561 CLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596
LP+ L G VPLF + G +L A L + +Y
Sbjct: 602 TLPLLSLSKGYCTVPLFSKSGGKLEPASLFVYVWYY 637
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q944C1 | PLCD4_ARATH | 3, ., 1, ., 4, ., 1, 1 | 0.6033 | 0.9800 | 0.9882 | yes | no |
| Q2VRL0 | PLCZ1_CHICK | 3, ., 1, ., 4, ., 1, 1 | 0.3025 | 0.9119 | 0.8618 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00024093001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (586 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00024094001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (588 aa) | • | • | • | 0.916 | ||||||
| GSVIVG00029293001 | SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (578 aa) | • | • | • | 0.916 | ||||||
| GSVIVG00029292001 | SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (592 aa) | • | • | • | 0.915 | ||||||
| GSVIVG00021509001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (615 aa) | • | • | • | 0.915 | ||||||
| GSVIVG00002733001 | SubName- Full=Chromosome chr1 scaffold_135, whole genome shotgun sequence; (815 aa) | • | • | 0.900 | |||||||
| GSVIVG00016252001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (731 aa) | • | • | 0.900 | |||||||
| GSVIVG00000653001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (689 aa) | • | 0.900 | ||||||||
| GSVIVG00034819001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (1105 aa) | • | • | 0.900 | |||||||
| GSVIVG00036636001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (567 aa) | • | 0.899 | ||||||||
| GSVIVG00036418001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (1946 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 602 | |||
| PLN02952 | 599 | PLN02952, PLN02952, phosphoinositide phospholipase | 0.0 | |
| PLN02230 | 598 | PLN02230, PLN02230, phosphoinositide phospholipase | 0.0 | |
| PLN02222 | 581 | PLN02222, PLN02222, phosphoinositide phospholipase | 0.0 | |
| PLN02228 | 567 | PLN02228, PLN02228, Phosphoinositide phospholipase | 0.0 | |
| PLN02223 | 537 | PLN02223, PLN02223, phosphoinositide phospholipase | 1e-137 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 8e-83 | |
| pfam00388 | 145 | pfam00388, PI-PLC-X, Phosphatidylinositol-specific | 3e-67 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 4e-67 | |
| smart00148 | 143 | smart00148, PLCXc, Phospholipase C, catalytic doma | 1e-53 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 2e-50 | |
| smart00149 | 115 | smart00149, PLCYc, Phospholipase C, catalytic doma | 1e-48 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 3e-45 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 6e-39 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 1e-36 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 2e-36 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 3e-35 | |
| pfam00387 | 117 | pfam00387, PI-PLC-Y, Phosphatidylinositol-specific | 8e-34 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 2e-33 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 3e-33 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 9e-33 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 1e-32 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 4e-31 | |
| cd00275 | 128 | cd00275, C2_PLC_like, C2 domain present in Phospho | 1e-30 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-30 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 3e-29 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 4e-29 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 5e-28 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 8e-28 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 1e-27 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 8e-27 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 7e-26 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 3e-25 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 3e-22 | |
| cd00137 | 274 | cd00137, PI-PLCc, Catalytic domain of prokaryotic | 4e-21 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 3e-15 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 7e-15 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 8e-15 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 2e-13 | |
| pfam09279 | 83 | pfam09279, efhand_like, Phosphoinositide-specific | 2e-13 | |
| smart00239 | 101 | smart00239, C2, Protein kinase C conserved region | 8e-13 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 1e-12 | |
| cd08557 | 271 | cd08557, PI-PLCc_bacteria_like, Catalytic domain o | 3e-12 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 7e-12 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 9e-12 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 1e-11 | |
| pfam00168 | 85 | pfam00168, C2, C2 domain | 1e-11 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 3e-11 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 4e-11 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 3e-10 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 1e-09 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 1e-09 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 1e-09 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-09 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 7e-09 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 2e-08 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 4e-08 | |
| cd00030 | 102 | cd00030, C2, C2 domain | 3e-07 | |
| cd08555 | 179 | cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phos | 3e-06 | |
| cd08590 | 267 | cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of | 2e-05 | |
| cd08588 | 270 | cd08588, PI-PLCc_At5g67130_like, Catalytic domain | 1e-04 | |
| cd04040 | 115 | cd04040, C2D_Tricalbin-like, C2 domain fourth repe | 7e-04 | |
| cd04025 | 123 | cd04025, C2B_RasA1_RasA4, C2 domain second repeat | 0.001 | |
| cd08395 | 120 | cd08395, C2C_Munc13, C2 domain third repeat in Mun | 0.002 |
| >gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 832 bits (2151), Expect = 0.0
Identities = 363/599 (60%), Positives = 443/599 (73%), Gaps = 18/599 (3%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGV 60
GSY + F RK K+ EA PP DVK++F K++ GG HM A+QL +FLV Q
Sbjct: 14 SGSYNY-KMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDC 72
Query: 61 SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHY 120
++ +A++IV++V+ R HH+ R+TR L ++DF H+L DLN P+ QV+ DMTAPLSHY
Sbjct: 73 TLAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYDDLNGPITPQVHHDMTAPLSHY 132
Query: 121 FIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180
FIYTGHNSYL GNQ SSDCS+VPI KAL+RGVRVIELDLWP S KD++LVLHGRTLTTPV
Sbjct: 133 FIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLTTPV 192
Query: 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240
LIKCL++I++ AFS+SPYPVI+T EDHL P LQAKVA+M TQ FG MLY PES+ L +F
Sbjct: 193 PLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQF 252
Query: 241 PSPEELKYRIIISTKPPKERREKKGINNRK---DISAKGKIST-EDVLGKEPPDLTANQA 296
PSPE LK+RIIISTKPPKE E G K ++S G+ S+ E + + Q
Sbjct: 253 PSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETEEAQTLESMLFEQE 312
Query: 297 DDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEK 356
D RSD D +DN AYKRLI IH GK KG LK+ + + ++K
Sbjct: 313 ADSRSDSD-------QDDNKSGEL------QKPAYKRLITIHAGKPKGTLKDAMKVAVDK 359
Query: 357 VRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVAL 416
VRR+SLSEQ+ EKAA + G DVVRFTQ+NILRIYPK TR+ SSNYKP+IGW+HGAQM+A
Sbjct: 360 VRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAF 419
Query: 417 NMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMG 476
NMQGYGKSLWLMHGMFRAN GCGY+KKP+FL+K+G D+VFDPK+KLPVKKTLKVK Y+G
Sbjct: 420 NMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLG 479
Query: 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP 536
DGW LDF +SPP FYT++ I GVPAD K TK DNW P W++EF+FPLT+P
Sbjct: 480 DGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVP 539
Query: 537 EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
E+ALLR+EVR+Y M EKD+F GQTCLPV +LRPGI +VPL D+KGE+L + RLLMRF F
Sbjct: 540 ELALLRIEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIF 598
|
Length = 599 |
| >gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Score = 738 bits (1906), Expect = 0.0
Identities = 363/597 (60%), Positives = 446/597 (74%), Gaps = 8/597 (1%)
Query: 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGG- 59
MGSY C + FTRK ++ E+GP ADV+++F+KYA+G HM+ EQL + + E G G
Sbjct: 7 MGSYKFCLI---FTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGE 63
Query: 60 VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSH 119
S+E+AE+IVD+VL+R HHIA+FTRR+LT++DF++YLFSTDLNPP+ +QV+Q+M APLSH
Sbjct: 64 TSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQVHQNMDAPLSH 123
Query: 120 YFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTP 179
YFI+TGHNSYL GNQ SS+CS++PI AL+RGVRV+ELDLWP DDV V HGRTLT
Sbjct: 124 YFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKE 182
Query: 180 VELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKE 239
V+L KCL +IK NAF+ S YPVI+T EDHL P LQ KVA+MITQTFG MLY +SE +E
Sbjct: 183 VKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQE 242
Query: 240 FPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDE 299
FPSPEELK +I+ISTKPPKE E KD KGK S EDV GKEP DL + Q+D +
Sbjct: 243 FPSPEELKEKILISTKPPKEYLEANDAK-EKDNGEKGKDSDEDVWGKEPEDLISTQSDLD 301
Query: 300 RSDYDTSEHNQCDEDNTEACDRVTRAS-GTLAYKRLIAIHNGKLKGCLKEELNLQLEKVR 358
+ ++ NQ D++ +C+ T YKRLIAIH GK KG L+ L + K+R
Sbjct: 302 KVTSSVNDLNQ-DDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIR 360
Query: 359 RISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNM 418
R+SLSEQ EKA SYG DV+RFTQKN LRIYPK TR NSSNYKP IGW+ GAQM+A NM
Sbjct: 361 RLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNM 420
Query: 419 QGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478
QGYG++LWLM GMFRAN GCGYVKKP+FL+ GP+ Q F PK+ KKTLKVK MGDG
Sbjct: 421 QGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDG 480
Query: 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM 538
W LDFK+ +SPP F+ RVGIAG P D+ M+ TK + D WTP+W+ EF FPL +PE+
Sbjct: 481 WLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPEL 540
Query: 539 ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
ALLRVEV ++ + EKD+F GQTCLPV ++R GIHAVPLF+RKG + S RLLMRFEF
Sbjct: 541 ALLRVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEF 597
|
Length = 598 |
| >gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Score = 680 bits (1755), Expect = 0.0
Identities = 322/587 (54%), Positives = 406/587 (69%), Gaps = 20/587 (3%)
Query: 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQ 71
CF R+ + + P ++K +F+KY+E G MT + L +FL++VQ + EDA+ I++
Sbjct: 11 CFRRRFRYTASEAPREIKTIFEKYSENGV-MTVDHLHRFLIDVQKQDKATREDAQSIINS 69
Query: 72 VLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPLGNQ-VYQDMTAPLSHYFIYTGHNSYL 130
H R L ++ F YLF D NPPL V+ DM AP+SHYFI+TGHNSYL
Sbjct: 70 ASSLLH------RNGLHLDAFFKYLFG-DNNPPLALHEVHHDMDAPISHYFIFTGHNSYL 122
Query: 131 IGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190
GNQ SSDCS+VPI ALK+GVRVIELD+WPNS KDD+ VLHG TLTTPV LIKCL+AI+
Sbjct: 123 TGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLTTPVGLIKCLKAIR 182
Query: 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYR 249
+AF S YPV++T EDHL P LQ+KVA+M+T+ FG +L++P E LKEFPSP LK R
Sbjct: 183 AHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFPSPNSLKKR 242
Query: 250 IIISTKPPKERREKKGINNRKDISAKGK-ISTEDVLGKEPPDLTANQADDERSDYDTSEH 308
IIISTKPPKE +E K ++ KGK + E+V G+E P +++D +
Sbjct: 243 IIISTKPPKEYKEGKDD----EVVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGD-- 296
Query: 309 NQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFE 368
D+D+ + + ++ + YK LIAIH GK KG + E L + +KVRR+SLSE++ E
Sbjct: 297 ---DDDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLE 353
Query: 369 KAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428
KAA Y +VRFTQ N+LRIYPK TRV SSNY P++GW HGAQMVA NMQGYG+SLWLM
Sbjct: 354 KAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLM 413
Query: 429 HGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDC 488
GMFRAN GCGY+KKP+ LLK G D +FDPK LPVK TL+V YMG+GWY DF+
Sbjct: 414 QGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFRHTHF 473
Query: 489 KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548
+SPP FYTRVGIAGVP D MK TK DNW P WD+ F FPLT+PE+ALLR+EV +Y
Sbjct: 474 DQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEY 533
Query: 549 SMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
M EKD+F GQTCLPV++L GI A PL RKGE+ S +LL++ EF
Sbjct: 534 DMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEF 580
|
Length = 581 |
| >gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 575 bits (1484), Expect = 0.0
Identities = 270/584 (46%), Positives = 359/584 (61%), Gaps = 37/584 (6%)
Query: 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQ 71
C +R K PP +K +F+ Y+ G M+ ++L +F+ EVQG ++ + I
Sbjct: 10 CCSRSFKEKTREPPVSIKRLFEAYSRNG-KMSFDELLRFVSEVQGERHAGLDYVQDIFHS 68
Query: 72 VLQRWHHIARFTRRSLTVEDFHHYLFSTDLNP-PLGNQVYQDMTAPLSHYFIYTGHNSYL 130
V HH + + F+ YLFS +P P+ QV+ DM APLSHYF+YTGHNSYL
Sbjct: 69 VK---HHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYL 125
Query: 131 IGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190
GNQ +S S PI +AL++GV+VIELDLWPN + + V HGRTLT+ +L KCL AIK
Sbjct: 126 TGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQKCLNAIK 185
Query: 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRI 250
+NAF S YPV++T EDHL P+LQA+VA+M+T+TF ML+ SE K FPSPEELK +I
Sbjct: 186 DNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPEELKNKI 245
Query: 251 IISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQ 310
+ISTKPPKE E K + + + + + N+
Sbjct: 246 LISTKPPKEYLESKTV----------QTTRTPTV------------KETSWKRVADAENK 283
Query: 311 CDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKA 370
E+ + S + Y+ LIAIH K LK+ L+ EK R+S+ EQ E
Sbjct: 284 ILEEYKD------EESEAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETM 337
Query: 371 AVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHG 430
+ GTD+VRFTQ+N++RIYPK TRV+SSNY P +GW HGAQMVA NMQG+GK LW+M G
Sbjct: 338 VRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQG 397
Query: 431 MFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKF 490
MFRAN GCGYVKKP LL E +FDP ++LP+K TLKVK Y G+GW LDF
Sbjct: 398 MFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFDQ 454
Query: 491 WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMALLRVEVRKYS 549
+SPP F+ ++GIAGVP D T+ VD W P+W +DEF F L +PE+ALL +V+ Y
Sbjct: 455 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYD 514
Query: 550 MPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRF 593
+++FAGQTCLP+ +L+ G+ AV L DR G+ + RLL+ F
Sbjct: 515 NDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSF 558
|
Length = 567 |
| >gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 409 bits (1051), Expect = e-137
Identities = 230/591 (38%), Positives = 316/591 (53%), Gaps = 67/591 (11%)
Query: 14 TRKHKVAEAGPPADVKEMFK-KYAEGGTHM--TAEQLWQFLVEVQGHGGVSIEDAEQIVD 70
+K ++ A P + F ++ M + + L + G + AE+I
Sbjct: 4 RKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAA 63
Query: 71 QVLQRWHHIARFTR-RSLTVEDFHHYLFSTDLNPPLGNQV-YQDMTAPLSHYFIYTGHNS 128
++ +R I F R L ++ + +LFST+LNPP+G+QV + DM APLSHYFI+T S
Sbjct: 64 ELKRRKCDILAFRNLRCLELDHLNEFLFSTELNPPIGDQVRHHDMHAPLSHYFIHTSLKS 123
Query: 129 YLIGNQ-FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLR 187
Y GN F S PI AL++GVRV+ELDL P+ KD + V P+EL +CL
Sbjct: 124 YFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD-GKDGICVRPKWNFEKPLELQECLD 182
Query: 188 AIKENAFSASP-YPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE-SECLKEFPSPEE 245
AIKE+AF+ YP+I+TF+D L P LQ+K QMI QTFG M+Y + L+EFPSP E
Sbjct: 183 AIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPSPAE 242
Query: 246 LKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDT 305
L+ +I+IS +PPKE L A D +
Sbjct: 243 LQNKILISRRPPKEL------------------------------LYAKADDGGVGVRNE 272
Query: 306 SEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQ 365
E + D Y+ L+ H + +G L++ L + + +++
Sbjct: 273 LEIQEGPADKN--------------YQSLVGFHAVEPRGMLQKALTGKADDIQQPGW--- 315
Query: 366 KFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNS-SNYKPMIGWIHGAQMVALNMQGYGKS 424
Y D++ FTQK LR PK+ + + YKP W+HGAQ++AL+ + +
Sbjct: 316 --------YERDIISFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEK 367
Query: 425 LWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFK 484
LWLM GMFRAN GCGYVKKP+FLL GP VF P E V K LKVK YMGDGW +DFK
Sbjct: 368 LWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWIVDFK 426
Query: 485 QMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVE 544
+ + S P Y R+ IAGVP D+K+ T K + W P W +EFTFPLT P++AL+ E
Sbjct: 427 KRIGRL-SKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFE 485
Query: 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
V Y + D F GQTCLPV +L GI AVPL+D +G+ S LL RF++
Sbjct: 486 VYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 536
|
Length = 537 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 8e-83
Identities = 94/152 (61%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
+ DMTAPLSHYFI++ HNSYL GNQ SS S PI +AL RG RVIELDLWP + D+
Sbjct: 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGG-RGDIC 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
VLHG TLT PV+ C++AIKENAF+AS YPVI+T E+HL+P LQAK AQ++ +T G L
Sbjct: 60 VLHGGTLTKPVKFEDCIKAIKENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKL 119
Query: 230 YSPESE-CLKEFPSPEELKYRIIISTKPPKER 260
+ P+SE +EFPSPEELK +I+IS KPP R
Sbjct: 120 FYPDSEDLPEEFPSPEELKGKILISDKPPVIR 151
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|215892 pfam00388, PI-PLC-X, Phosphatidylinositol-specific phospholipase C, X domain | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 3e-67
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
Query: 113 MTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLH 172
M+ PLSHYFI + HN+YL G+Q + S +AL RG R +ELD W + + +V H
Sbjct: 1 MSQPLSHYFISSSHNTYLTGDQLTGKSSVEAYIQALLRGCRCVELDCW-DGPDGEPVVYH 59
Query: 173 GRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSP 232
G TLT+ + L AIKE AF S YPVIL+ E+H +P QAK+A+++ + FG MLY+P
Sbjct: 60 GYTLTSKIPFRDVLEAIKEYAFVTSEYPVILSLENHCSPEQQAKMAEILKEIFGDMLYTP 119
Query: 233 --ESECLKEFPSPEELKYRIIISTKP 256
+ E E PSPE+LK +I++ K
Sbjct: 120 PLDDESSTELPSPEDLKGKILLKVKK 145
|
This associates with pfam00387 to form a single structural unit. Length = 145 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 4e-67
Identities = 67/148 (45%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
YQDMT PLSHYFI + HN+YL G+Q + + S +AL RG R +ELD W + +
Sbjct: 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGP-DGEPV 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
V HG TLT+ + + AIKE AF SPYPVIL+ E+H + Q K+AQ++ + FG L
Sbjct: 60 VYHGHTLTSKILFKDVIEAIKEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKL 119
Query: 230 Y-SPESECLKEFPSPEELKYRIIISTKP 256
P E + PSPE+LK +I+I K
Sbjct: 120 LTPPLDENPVQLPSPEQLKGKILIKGKK 147
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 1e-53
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Query: 113 MTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLH 172
M PLSHYFI + HN+YL G Q + S +AL G R +ELD W + V + H
Sbjct: 1 MDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDAGCRCVELDCWDGPDGEPV-IYH 59
Query: 173 GRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSP 232
G T T P++L + L AIK+ AF SPYPVIL+ E+H +P QAK+AQM + FG MLY+P
Sbjct: 60 GHTFTLPIKLSEVLEAIKDFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTP 119
Query: 233 ESECLKE-FPSPEELKYRIIISTK 255
E PSPE+L+ +I++ +
Sbjct: 120 PLTSSLEVLPSPEQLRGKILLKVR 143
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 143 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-50
Identities = 106/326 (32%), Positives = 141/326 (43%), Gaps = 68/326 (20%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
QDMT PLSHYFI + HN+YLI +Q S +AL+RG R +ELD W + + ++
Sbjct: 2 QDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCW-DGPNGEPVI 60
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLY 230
HG TLT+ + + AI E AF AS YP+IL E+H + Q +AQ + + FG LY
Sbjct: 61 YHGHTLTSKISFRSVIEAINEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLY 120
Query: 231 -SPESECLKEFPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPP 289
P +E PSP +LK +III K K R+ L KE
Sbjct: 121 TEPPNEGESYLPSPHDLKGKIIIKGKKLKRRK----------------------LCKELS 158
Query: 290 DLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEE 349
DL + D+ TS NQ E C
Sbjct: 159 DLVSLCKSVRFQDFPTSAQNQKYW---EVC------------------------------ 185
Query: 350 LNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIH 409
S SE + A + D V + +K + R+YP RV+SSNY P W
Sbjct: 186 -----------SFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNC 234
Query: 410 GAQMVALNMQGYGKSLWLMHGMFRAN 435
G Q+VA+N Q G + L G F N
Sbjct: 235 GCQIVAMNYQTPGLMMDLNTGKFLEN 260
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-48
Identities = 50/116 (43%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 332 KRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYP 391
L+ + + S SE K +K TD VR+ Q+ + R+YP
Sbjct: 1 SDLVIYCAPVKFRSFESAESKN-PFYEMSSFSETKAKKLLKKSPTDFVRYNQRQLSRVYP 59
Query: 392 KQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFL 447
K TRV+SSNY P + W HG QMVALN Q K + L GMFRAN GCGYV KP+FL
Sbjct: 60 KGTRVDSSNYNPQVFWNHGCQMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 115 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 3e-45
Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
+D++ PL+ YFI + HN+YL+G Q + D S +AL+RG R +E+D+W + V
Sbjct: 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPV- 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
V HG TLT+ V RAIK+ AF SPYP+IL+ E H + Q ++ +++ +TFG +L
Sbjct: 60 VTHGYTLTSSVPFRDVCRAIKKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLL 119
Query: 230 YS-PESECLKEFPSPEELKYRIIISTK 255
+ P E PSPEEL+ +I+I K
Sbjct: 120 VTEPLDGLEDELPSPEELRGKILIKVK 146
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 6e-39
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLW--PNSAKDD 167
YQDMT PLSHYFI + HN+YL+ +Q S +ALK+G R +ELD W P+ +
Sbjct: 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDG---E 57
Query: 168 VLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227
++ HG TLT+ + ++AI+E AF SPYPVIL+ E+H + Q +AQ + G
Sbjct: 58 PIIYHGHTLTSKILFKDVIQAIREYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGD 117
Query: 228 MLYS-PESECLKEFPSPEELKYRIIISTK 255
L + P L PSPEELK +I++ K
Sbjct: 118 KLLTQPLDGVLTALPSPEELKGKILVKGK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 1e-36
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 8/153 (5%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITK-ALKRGVRVIELDLWPNSAKDDV 168
YQDM PLSHYFI + HN+YL G QF S V + + L G R IELD W +D+
Sbjct: 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLSGCRCIELDCWDGKGEDEE 59
Query: 169 -LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227
++ HG+T+ T + + AI E AF S YPVIL+FE+H + QAK+A+ + FG
Sbjct: 60 PIITHGKTMCTEILFKDVIEAIAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGD 119
Query: 228 MLYSP--ESECLK---EFPSPEELKYRIIISTK 255
+L + E L+ PSP +LK +I+I K
Sbjct: 120 LLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-36
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 356 KVRRISLSEQKFEKA-AVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMV 414
V R SLSE + +K + TD++ FTQKN+LR+YP R+ SSNY PM+ W+HGAQMV
Sbjct: 148 PVIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMV 207
Query: 415 ALNMQGYGKSLWLMHGMFRAN 435
ALNMQGY + LWL G FRAN
Sbjct: 208 ALNMQGYDRPLWLNRGKFRAN 228
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 3e-35
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
QDM PLSHY+I + HN+YL G+Q SS+ S + L+ G R IELD W + ++
Sbjct: 2 QDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCW-DGPDGMPII 60
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLY 230
HG TLT+ ++ + L+ IKE+AF S YPVIL+ E+H + Q +AQ + FG ML
Sbjct: 61 YHGHTLTSKIKFMDVLKTIKEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLL 120
Query: 231 S-PESECLKEFPSPEELKYRIIISTK 255
+ P + PSP +LK +III K
Sbjct: 121 TQPVDRNADQLPSPNQLKRKIIIKHK 146
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 8e-34
Identities = 38/88 (43%), Positives = 47/88 (53%)
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
S SE K +K + V+ ++ + R+YPK RV+SSNY P W G QMVALN Q
Sbjct: 29 SSFSETKAKKLLKESPAEFVKHNRRQLSRVYPKGLRVDSSNYDPQPFWNAGCQMVALNWQ 88
Query: 420 GYGKSLWLMHGMFRANAGCGYVKKPNFL 447
+ L MF N CGYV KP FL
Sbjct: 89 TPDLGMQLNEAMFADNGRCGYVLKPEFL 116
|
This associates with pfam00388 to form a single structural unit. Length = 117 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-33
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
YQDM PLSHY + + HN+YL+ +Q + S +AL +G R +ELD W ++ +
Sbjct: 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI- 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
+ HG T T+ + LRAI++ AF ASPYPVIL+ E+H + Q +A+ + G +L
Sbjct: 60 IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPIL 119
Query: 230 Y-SPESECLKEFPSPEELKYRIIISTKPPKERRE 262
P PSPE+LK +I++ K K E
Sbjct: 120 LDQPLDGVTTSLPSPEQLKGKILLKGKKLKLVPE 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 3e-33
Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDV- 168
YQDM PL+HYFI + HN+YL G QF S + L G R IELD W +D
Sbjct: 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEP 60
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAM 228
++ HG+ + T + ++AIK+ AF S YPVIL+FE+H + Q K+A+ + FG +
Sbjct: 61 IITHGKAMCTDILFKDVIQAIKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDL 120
Query: 229 LYSP--ESECL---KEFPSPEELKYRIIISTK 255
L + ES L PSP +LK +I+I K
Sbjct: 121 LLTKPLESHPLEPGVPLPSPNKLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 9e-33
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
+QDM+ PL+HYFI + HN+YL +Q S +A +G R +ELD W + +
Sbjct: 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCW-EGPGGEPV 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
+ HG TLT+ + ++A++++AF+ASPYPVIL+ E+H QA +A+ + G ML
Sbjct: 60 IYHGHTLTSKILFRDVIQAVRQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDML 119
Query: 230 YSP--ESECLKEFPSPEELKYRIIISTK 255
+ +S +E PSPEELK R+++ K
Sbjct: 120 VTQPLDSLNPEELPSPEELKGRVLVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 124 bits (315), Expect = 1e-32
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 355 EKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMV 414
+K S SE K K + V++ ++ + R+YPK TRV+SSNY P W G QMV
Sbjct: 146 KKYHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMV 205
Query: 415 ALNMQGYGKSLWLMHGMFRAN 435
ALN Q + L G F N
Sbjct: 206 ALNYQTPDLPMQLNQGKFEQN 226
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 4e-31
Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKD-DV 168
QDMT PLSHYFI + HN+YL G+Q S + L+ G R +E+D W D +
Sbjct: 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCW--DGPDGEP 58
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAM 228
+V HG TLT+ + + I + AF + YPVIL+ E+H + Q K+AQ + + G
Sbjct: 59 VVHHGYTLTSKILFRDVIETINKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDK 118
Query: 229 L--YSPESECLKEFPSPEELKYRIIISTKP 256
L S S K+ PSP+ LK +I+I K
Sbjct: 119 LDLSSVISGDSKQLPSPQSLKGKILIKGKK 148
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-30
Identities = 46/133 (34%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA-DKKMKSTKKKVDNW-TP 523
TL +K G S Y V I G+PA D TK +N P
Sbjct: 1 PLTLTIKIISGQQLPKPKGDKG----SIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNP 56
Query: 524 VWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEE 583
VW++ F F +T+PE+A LR V D+F GQ CLP+ LR G VPL D KGE
Sbjct: 57 VWNETFEFDVTVPELAFLRFVVYDEDS-GDDDFLGQACLPLDSLRQGYRHVPLLDSKGEP 115
Query: 584 LGSARLLMRFEFY 596
L + L + +
Sbjct: 116 LELSTLFVHIDIT 128
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-II topology. Length = 128 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-30
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
++M PLSHY+I + HN+YL G+QFSS+ S + L+ G R IELD W + ++
Sbjct: 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCW-DGPDGMPVI 60
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLY 230
HG TLTT ++ L IKE+AF S YP+IL+ EDH + Q +AQ + FG ML
Sbjct: 61 YHGHTLTTKIKFSDVLHTIKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLL 120
Query: 231 S-PESECLKEFPSPEELKYRIIISTK 255
+ P PSP +LK +I+I K
Sbjct: 121 TKPVDINADGLPSPNQLKRKILIKHK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 3e-29
Identities = 67/157 (42%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKD-DV 168
+QDMT PL+HYFI + HN+YL QFS S + L G R +ELD W D +
Sbjct: 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEP 60
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLN-PHLQAKVAQMITQTFGA 227
++ HG T+TT + + AI E+AF SPYPVIL+FE+H++ P QAK+A+ FG
Sbjct: 61 IITHGFTMTTEILFKDAIEAIAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGD 120
Query: 228 MLYSP--ESECLK---EFPSPEELKYRIIISTKPPKE 259
ML + E LK PSPE+L+ +I+I K +E
Sbjct: 121 MLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE 157
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 4e-29
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
YQDM PLS YFI + HN+YL+ +Q AL++G R +E+D W + A ++ +
Sbjct: 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCW-DGADNEPV 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFG--- 226
V HG TLT+ + + + +++ AF S YPV+L+ E+H + Q +A + G
Sbjct: 60 VYHGYTLTSKILFKEVITTVEKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKL 119
Query: 227 --AMLYSPESECLKEFPSPEELKYRIIISTK 255
A + P + E PSPE LK++I++ K
Sbjct: 120 LRAPIDDPATG---ELPSPEALKFKILVKNK 147
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 5e-28
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
QDM PLSHY+I + HN+YL G+Q S+ S + L+ G R IELD W + ++
Sbjct: 2 QDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCW-DGPDGKPII 60
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFG-AML 229
HG T TT ++ ++AIK++AF S YPVIL+ E+H + Q +A++ + FG +L
Sbjct: 61 YHGWTRTTKIKFDDVVQAIKDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLL 120
Query: 230 YSPESECLKEFPSPEELKYRIIISTK 255
P + PSP +LK +III K
Sbjct: 121 MKPLEASADQLPSPTQLKEKIIIKHK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 8e-28
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
YQDMT PL HYFI + HN+YL+ +Q S +ALKRG R +E+D+W + + +
Sbjct: 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVW-DGPNGEPI 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
V HG T T+ + + A+ + AF S YPVIL+ E+H Q +AQ +T+ G L
Sbjct: 60 VYHGHTFTSKILFKDVVAAVAQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKL 119
Query: 230 YSP--ESECLKEFPSPEELKYRIIISTK 255
S + + PSPEEL+ +I++ K
Sbjct: 120 LSTTLDGVLPTQLPSPEELRGKILLKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDD--V 168
+D+ PLS+Y+I + HN+YL G+Q + S ++ L G R +ELD W DD
Sbjct: 2 EDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDG---DDGMP 58
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAM 228
++ HG TLTT + + AI +AF S YPVIL+ E+H + Q K+A++ FG
Sbjct: 59 IIYHGHTLTTKIPFKDVVEAINRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEK 118
Query: 229 LYSP---ESECLKE--FPSPEELKYRIIISTKPPKE 259
L + ES+ + PSP +LK +I++ K E
Sbjct: 119 LVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE 154
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 8e-27
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPN-SAKDDVL 169
+DM+ PLSHYFI + HN+YL Q + + S + L G R +ELD W +A+++ +
Sbjct: 2 EDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPV 61
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLN-PHLQAKVAQMITQTFG-A 227
+ HG T+TT + + + AI E AF SP+P++L+FE+H++ P QAK+A+ FG A
Sbjct: 62 ITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDA 121
Query: 228 MLYSPESECLKE----FPSPEELKYRIIISTK 255
+L P + E PSP +L Y+I++ K
Sbjct: 122 LLMEPLEKYPLESGVPLPSPMDLMYKILVKNK 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 7e-26
Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 112 DMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKD-DVLV 170
DM PLSHYFI + HN+YL Q + S + L G R IELD W + + +
Sbjct: 3 DMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFI 62
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNP-HLQAKVAQMITQTFG-AM 228
HG T+TT + + AI E+AF SPYPVIL+FE+H++ QAK+A+ FG A+
Sbjct: 63 THGFTMTTEIPFKDVIEAIAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDAL 122
Query: 229 LYSP-ESECLK---EFPSPEELKYRIIISTK 255
L P + L + PSP+EL +I++ K
Sbjct: 123 LIDPLDKYPLVPGVQLPSPQELMGKILVKNK 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
QDMT PLSHYFI + HN+YL G+Q S L+ G R +E+D W + + +V
Sbjct: 2 QDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCW-DGPDGEPIV 60
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAM-- 228
HG TLT+ + + I + AF + YPVIL+ E+H + Q K+AQ +T+ G
Sbjct: 61 HHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLD 120
Query: 229 LYSPESECLKEFPSPEELKYRIIISTKP 256
L S S PSPE LK +I++ K
Sbjct: 121 LSSVISNDCTRLPSPEILKGKILVKGKK 148
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 95.9 bits (238), Expect = 3e-22
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVL 169
QDM PL +YFI + HN+YL G+Q S + L+ G R +E+D W + + +
Sbjct: 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCW-DGPDGEPV 59
Query: 170 VLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAML 229
V HG TLT+ + + I + AF + +PVIL+ E+H + Q K+AQ + + FG L
Sbjct: 60 VHHGYTLTSKITFRDVIETINKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKL 119
Query: 230 --YSPESECLKEFPSPEELKYRIIISTK 255
S + K+ PSP+ LK +I++ K
Sbjct: 120 DLSSVLTGDPKQLPSPQLLKGKILVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176497 cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 4e-21
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPIT-----KALKRGVRVIELDLWPNSA 164
+ T PL+HY I H++YL QF+ + L G R +++ W
Sbjct: 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDG-- 58
Query: 165 KDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDH--LNPHLQAKVAQMIT 222
K + +++ + L + + AI + P +I++ ++ QAK+A+
Sbjct: 59 KPEEPIIYHGPTFLDIFLKEVIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCR 118
Query: 223 QTFGAMLYSPESECLKEFPSPEELKYRIIISTK 255
FG ML +P + PS E+L+ +I++ K
Sbjct: 119 TIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNK 151
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 274 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
SLSE+ K + + +++++R+YP TR++SSN+ P+ W G QMVALN Q
Sbjct: 156 FSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQ 215
Query: 420 GYGKSLWLMHGMFRAN 435
Y + L MF +
Sbjct: 216 TYDLGMQLNEAMFAGS 231
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 7e-15
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 346 LKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMI 405
LK ++ ++ +K + S SE + + +RF Q+ + RIYP R++SSN+ P
Sbjct: 138 LKGKILIKGKKWQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQP 197
Query: 406 GWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
W G Q+VALN Q G+ L L FRAN
Sbjct: 198 YWNAGCQLVALNYQTEGRMLQLNRAKFRAN 227
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 8e-15
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S SE K K A G + VR ++ + RIYP R +SSNY P W G Q+VALN Q
Sbjct: 183 SFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQT 242
Query: 421 YGKSLWLMHGMFRAN 435
G+ + L G+FR N
Sbjct: 243 PGEEMDLNDGLFRQN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-13
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 361 SLSEQKFEK-AAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
S E K EK G +++ ++ + R+YPK RV+SSNY P+ W G+QMVALN Q
Sbjct: 154 SFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQ 213
Query: 420 GYGKSLWLMHGMFRAN 435
K + L +F N
Sbjct: 214 TPDKPMQLNQALFMLN 229
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|150071 pfam09279, efhand_like, Phosphoinositide-specific phospholipase C, efhand-like | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 2e-13
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRS 86
++ E+FK+Y+ +TAE+L +FL E Q ++ E A I+ +++ +R
Sbjct: 1 EIDELFKEYSSNKGVLTAEELRRFLNEEQKDPRLTEEQALAII----EKYEPNEEAKKRG 56
Query: 87 -LTVEDFHHYLFSTDLNPPL 105
L+++ F YLFS + N
Sbjct: 57 QLSLDGFTRYLFSDE-NSIF 75
|
Members of this family are predominantly found in phosphoinositide-specific phospholipase C. They adopt a structure consisting of a core of four alpha helices, in an EF like fold, and are required for functioning of the enzyme. Length = 83 |
| >gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 8e-13
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDD 527
TL VK Y +V + G P K+ K TK + PVW++
Sbjct: 1 TLTVKIISARNL------PPKDKGGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNE 52
Query: 528 EFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPL 576
F F + PE+A L +EV +D+F GQ +P+ L G L
Sbjct: 53 TFEFEVPPPELAELEIEVYDKDRFGRDDFIGQVTIPLSDLLLGGRHEKL 101
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. Length = 101 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 1e-12
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 329 LAYKRLIAIHNGKL----KGCLKEELNLQLEKVRRI-SLSEQKFEKAAVSYGTDVVRFTQ 383
+ +K+LIAI L K K + NL+ + I S E K ++++ +
Sbjct: 143 IKHKKLIAIELSDLVVYCKPTSKTKDNLENPDFKEIRSFVETKAPSIIRQKPVQLLKYNR 202
Query: 384 KNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
K + R+YPK RV+SSNY P W+ G+QMVALN Q K + L H +F N
Sbjct: 203 KGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 3e-12
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 112 DMTAPLSHYFIYTGHNSY-------LIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSA 164
PLS I HNSY S D+ IT L GVR ++L + +
Sbjct: 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPD 63
Query: 165 KDDVLVLHGRTLTTPVELIKCLRAIKENAFSAS-PY-PVILTFEDHLNPH---LQAKVAQ 219
D+ V HG L L L +K F + P VIL E ++
Sbjct: 64 DGDLYVCHGLFLLNGQTLEDVLNEVK--DFLDAHPSEVVILDLEHEYGGDNGEDHDELDA 121
Query: 220 MITQTFGAMLYSP 232
++ G LY P
Sbjct: 122 LLRDVLGDPLYRP 134
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD). They are distinct from the typical eukaryotic phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11), which have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, which is closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be distinct from that of typical eukaryotic PI-PLCs. This family also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host's immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 271 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 7e-12
Identities = 37/75 (49%), Positives = 42/75 (56%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S+ E K K S G D V TQ+ I RIYPK TR +SSNY P W G QMVALN Q
Sbjct: 183 SIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQT 242
Query: 421 YGKSLWLMHGMFRAN 435
G + L +G F N
Sbjct: 243 LGAPMDLQNGKFLDN 257
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 9e-12
Identities = 33/75 (44%), Positives = 39/75 (52%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S SE K + +RF Q+ + RIYP RV+SSNY P W G QMVALN Q
Sbjct: 180 SFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQS 239
Query: 421 YGKSLWLMHGMFRAN 435
G+ L L F AN
Sbjct: 240 EGRMLQLNRAKFSAN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 1e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SL+E ++ Y +V+ T+ +LR YP TR++SSN P+I W+HG Q+VALN Q
Sbjct: 180 SLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQT 239
Query: 421 YGKSLWLMHGMFRAN 435
+ L MF AN
Sbjct: 240 DDLPMHLNAAMFEAN 254
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|215765 pfam00168, C2, C2 domain | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDE 528
L+V D Y +V + G D K TK + PVW++
Sbjct: 1 LRVTVISAKNL----PPKDLN--GKSDPYVKVSLGGQKKDTK--KTKVVKNTLNPVWNET 52
Query: 529 FTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTC 561
FTF +T+PE+A LR+EV Y KD+F G+
Sbjct: 53 FTFEVTLPELAELRIEVYDYDRFGKDDFIGEVT 85
|
Length = 85 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 376 TDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
+ V + ++ + RIYPK TRV+SSNY P I W G QMVALN Q + L G F N
Sbjct: 198 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 4e-11
Identities = 30/75 (40%), Positives = 38/75 (50%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S +E K K G + V+ + R+YP R +SSNY P W G QMVALN Q
Sbjct: 184 SFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQT 243
Query: 421 YGKSLWLMHGMFRAN 435
G + L G+FR N
Sbjct: 244 AGLEMDLNDGLFRQN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 376 TDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
+ V + ++ + RIYPK TRV+SSNY P I W G QMV+LN Q + L G F N
Sbjct: 198 IEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGKFEYN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 1e-09
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
SLSE+K +K G VR + + R+YP R+NS+NY P W G Q+VALN Q
Sbjct: 184 SLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT 243
Query: 421 YGKSLWLMHGMFRAN 435
G + L G F N
Sbjct: 244 PGYEMDLNAGRFLVN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 1e-09
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 376 TDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
+ V + +K + RIYPK TRV+SSNY P + W G QMVALN Q ++ L G+F N
Sbjct: 199 MEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 360 ISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419
+S SE + + + + QK + RIYP R++SSN+ P+ W G Q+VALN Q
Sbjct: 178 LSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ 237
Query: 420 GYGKSLWLMHGMFRAN 435
G+ + L F N
Sbjct: 238 SEGRMMQLNRAKFMVN 253
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 346 LKEELNLQLEKVRR--ISLSEQKFEK-AAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYK 402
LK ++ ++ +K+ R S E K EK S G +++ ++ + RIYPK R++SSNY
Sbjct: 137 LKRKILIKHKKLYRDMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYD 196
Query: 403 PMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
P+ WI G+Q+VALN Q K + + +F
Sbjct: 197 PLPMWICGSQLVALNFQTPDKPMQMNQALFMLG 229
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 7e-09
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 377 DVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRAN 435
+ V + + + RIYPK TRV+SSNY P + W G QMVALN Q S+ + GM+ N
Sbjct: 200 EFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S SE + + G VR + RIYP R +SSNY P+ W G Q+VALN Q
Sbjct: 184 SFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQT 243
Query: 421 YGKSLWLMHGMFRAN 435
G + + G F+ N
Sbjct: 244 PGPEMDVYLGCFQDN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 4e-08
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 361 SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQG 420
S +E K V + ++ + RIYPK TR++SSNY P + W G QMVALN Q
Sbjct: 187 SFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQT 246
Query: 421 YGKSLWLMHGMFRAN 435
+ +F N
Sbjct: 247 MDLPMQQNMALFEFN 261
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|175973 cd00030, C2, C2 domain | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-07
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQL 567
K+ TK + PVW++ F FP+ PE L VEV KD+F G+ +P+ +L
Sbjct: 30 GKQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDKDRFSKDDFLGEVEIPLSEL 89
Query: 568 RP 569
Sbjct: 90 LD 91
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 102 |
| >gnl|CDD|176498 cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 125 GHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVL-HGRTLT------ 177
H Y Q ++ +AL G R +ELD+ KD LV+ HG TL
Sbjct: 3 SHRGYSQNGQENTL---EAFYRALDAGARGLELDVRLT--KDGELVVYHGPTLDRTTAGI 57
Query: 178 TPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAK-VAQMITQ 223
P L + L I + + Y +IL+ E + + +A+++ +
Sbjct: 58 LPPTLEEVLELIADYLKN-PDYTIILSLEIKQDSPEYDEFLAKVLKE 103
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols that are major sources of carbon and phosphate. Both, PI-PLCs and GP-GDEs, can hydrolyze the 3'-5' phosphodiester bonds in different substrates, and utilize a similar mechanism of general base and acid catalysis with conserved histidine residues, which consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81, glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs). The residues essential for enzyme activities and metal binding are not conserved in these sequence homologs, which might suggest that the function of catalytic domains in these proteins might be distinct from those in typical PLC-like phosphodiesterases. Length = 179 |
| >gnl|CDD|176532 cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 41/155 (26%)
Query: 108 QVYQDMTAPLSHYFIYTGHNSY----------------LIGNQFSSDCSDVPITKALKRG 151
Q D APL I HNSY L NQ S IT L G
Sbjct: 1 QRNLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELS------ITDQLDLG 54
Query: 152 VRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAF-----------SASPYP 200
R +ELD+ D+ + HG + + ++ F +A+P
Sbjct: 55 ARFLELDVH--WTTGDLRLCHGGDHGY-----LGVCSSEDRLFEDGLNEIADWLNANPDE 107
Query: 201 VI-LTFEDHLNPHLQAKVAQMITQTFGAMLYSPES 234
V+ L EDH + ++ ++ FG +LY+P
Sbjct: 108 VVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSD 142
|
This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity. Length = 267 |
| >gnl|CDD|176530 cd08588, PI-PLCc_At5g67130_like, Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 30/147 (20%)
Query: 124 TGHNSY--------LIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHG-R 174
T HNS+ L NQ ITK L GVR + LD+ + + + H
Sbjct: 19 TTHNSFANSEDAFFLAPNQEDD------ITKQLDDGVRGLMLDIHDAN--GGLRLCHSVC 70
Query: 175 TLTTPVELIKCLRAIKENAF-SASPYPVI-LTFEDHLN--PHLQAKVAQMITQTFGAMLY 230
L L LR + F A+P V+ L ED+++ P L++K+ ++ ++Y
Sbjct: 71 GLGDGGPLSDVLREV--VDFLDANPNEVVTLFLEDYVSPGPLLRSKLFRV--AGLTDLVY 126
Query: 231 SPESE--CLKEFPSPEEL---KYRIII 252
P++ ++P+ E+ R+++
Sbjct: 127 VPDAMPWAGSDWPTLGEMIDANKRLLV 153
|
This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Length = 270 |
| >gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 7e-04
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVRKYSMPEKDEFAGQTCLPVF 565
+K+ TK PVW++ F P +P A+L+VEV + KD+ G + +
Sbjct: 30 GEKVFKTKTIKKTLNPVWNESFEVP--VPSRVRAVLKVEVYDWDRGGKDDLLGSAYIDLS 87
Query: 566 QLRPGIHA---VPLFDRKGEELGSARL 589
L P +PL + G +LG+ L
Sbjct: 88 DLEPEETTELTLPLDGQGGGKLGAVFL 114
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the fifth C2 repeat, C2E, and has a type-II topology. Length = 115 |
| >gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.001
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 523 PVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLF----- 577
P W++ F F L + L VEV + + K++F G+ + L+ F
Sbjct: 45 PRWNEVFEFELMEGADSPLSVEVWDWDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPD 104
Query: 578 ----DRKGEELGSARLLMR 592
+ G LGS RL +R
Sbjct: 105 PRAEEESGGNLGSLRLKVR 123
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 123 |
| >gnl|CDD|176041 cd08395, C2C_Munc13, C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.002
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 508 DKKMK-STKKKVDNWTPVWDDEFTFPLTI---PEMALLRVEVRKYSMPEKDEFAGQTCLP 563
DKK K +TK K +NW+P +++ F F L PE L + V+ Y D G T
Sbjct: 35 DKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELHICVKDYCFARDDRLVGVT--- 91
Query: 564 VFQLR 568
V QLR
Sbjct: 92 VLQLR 96
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevin, and synaptotagmin suggesting a role for these as scaffolding proteins.C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. Length = 120 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 602 | |||
| PLN02230 | 598 | phosphoinositide phospholipase C 4 | 100.0 | |
| PLN02222 | 581 | phosphoinositide phospholipase C 2 | 100.0 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 100.0 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 100.0 | |
| PLN02228 | 567 | Phosphoinositide phospholipase C | 100.0 | |
| PLN02223 | 537 | phosphoinositide phospholipase C | 100.0 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| cd08629 | 258 | PI-PLCc_delta1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08633 | 254 | PI-PLCc_eta2 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08624 | 261 | PI-PLCc_beta2 Catalytic domain of metazoan phospho | 100.0 | |
| cd08630 | 258 | PI-PLCc_delta3 Catalytic domain of metazoan phosph | 100.0 | |
| cd08632 | 253 | PI-PLCc_eta1 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08595 | 257 | PI-PLCc_zeta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08631 | 258 | PI-PLCc_delta4 Catalytic domain of metazoan phosph | 100.0 | |
| cd08596 | 254 | PI-PLCc_epsilon Catalytic domain of metazoan phosp | 100.0 | |
| cd08626 | 257 | PI-PLCc_beta4 Catalytic domain of metazoan phospho | 100.0 | |
| cd08623 | 258 | PI-PLCc_beta1 Catalytic domain of metazoan phospho | 100.0 | |
| cd08591 | 257 | PI-PLCc_beta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08625 | 258 | PI-PLCc_beta3 Catalytic domain of metazoan phospho | 100.0 | |
| cd08593 | 257 | PI-PLCc_delta Catalytic domain of metazoan phospho | 100.0 | |
| cd08594 | 227 | PI-PLCc_eta Catalytic domain of metazoan phosphoin | 100.0 | |
| cd08628 | 254 | PI-PLCc_gamma2 Catalytic domain of metazoan phosph | 100.0 | |
| cd08597 | 260 | PI-PLCc_PRIP_metazoa Catalytic domain of metazoan | 100.0 | |
| cd08558 | 226 | PI-PLCc_eukaryota Catalytic domain of eukaryotic p | 100.0 | |
| cd08627 | 229 | PI-PLCc_gamma1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08598 | 231 | PI-PLC1c_yeast Catalytic domain of putative yeast | 100.0 | |
| cd08592 | 229 | PI-PLCc_gamma Catalytic domain of metazoan phospho | 100.0 | |
| cd08599 | 228 | PI-PLCc_plant Catalytic domain of plant phosphatid | 100.0 | |
| cd00137 | 274 | PI-PLCc Catalytic domain of prokaryotic and eukary | 100.0 | |
| smart00149 | 115 | PLCYc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00387 | 118 | PI-PLC-Y: Phosphatidylinositol-specific phospholip | 100.0 | |
| smart00148 | 135 | PLCXc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00388 | 146 | PI-PLC-X: Phosphatidylinositol-specific phospholip | 100.0 | |
| cd08589 | 324 | PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc | 99.86 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 99.79 | |
| cd08590 | 267 | PI-PLCc_Rv2075c_like Catalytic domain of uncharact | 99.76 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 99.71 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 99.66 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 99.65 | |
| cd08677 | 118 | C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a | 99.65 | |
| cd08557 | 271 | PI-PLCc_bacteria_like Catalytic domain of bacteria | 99.64 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 99.63 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 99.63 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 99.62 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 99.61 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 99.61 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 99.61 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 99.61 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 99.6 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 99.59 | |
| cd08692 | 135 | C2B_Tac2-N C2 domain second repeat found in Tac2-N | 99.59 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 99.58 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 99.58 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 99.57 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 99.57 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 99.56 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 99.56 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 99.56 | |
| cd08407 | 138 | C2B_Synaptotagmin-13 C2 domain second repeat prese | 99.56 | |
| cd04039 | 108 | C2_PSD C2 domain present in Phosphatidylserine dec | 99.56 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 99.55 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 99.54 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 99.54 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 99.54 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 99.54 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 99.53 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 99.53 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 99.52 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 99.52 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 99.52 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 99.51 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 99.51 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 99.51 | |
| KOG1030 | 168 | consensus Predicted Ca2+-dependent phospholipid-bi | 99.51 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 99.51 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 99.5 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 99.49 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 99.49 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 99.49 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 99.49 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 99.48 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 99.48 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 99.48 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 99.48 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 99.48 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 99.48 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 99.48 | |
| cd08410 | 135 | C2B_Synaptotagmin-17 C2 domain second repeat prese | 99.48 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 99.47 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 99.47 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 99.47 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 99.46 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 99.46 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 99.46 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 99.46 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 99.46 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 99.45 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 99.45 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 99.45 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 99.44 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 99.44 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 99.44 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 99.43 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 99.42 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 99.42 | |
| cd04048 | 120 | C2A_Copine C2 domain first repeat in Copine. There | 99.42 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 99.41 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 99.41 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 99.41 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 99.41 | |
| PF09279 | 83 | EF-hand_like: Phosphoinositide-specific phospholip | 99.41 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 99.41 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 99.4 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 99.39 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 99.39 | |
| cd04037 | 124 | C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli | 99.38 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 99.37 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 99.36 | |
| cd08686 | 118 | C2_ABR C2 domain in the Active BCR (Breakpoint clu | 99.34 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 99.33 | |
| PLN03008 | 868 | Phospholipase D delta | 99.33 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 99.3 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 99.3 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.28 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 99.27 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 99.27 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 99.26 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 99.26 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 99.25 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 99.24 | |
| cd08555 | 179 | PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi | 99.24 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 99.18 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.14 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 99.1 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 99.05 | |
| cd08374 | 133 | C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli | 99.01 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.99 | |
| PLN02270 | 808 | phospholipase D alpha | 98.9 | |
| cd08586 | 279 | PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce | 98.87 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 98.85 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 98.84 | |
| cd08588 | 270 | PI-PLCc_At5g67130_like Catalytic domain of Arabido | 98.83 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.63 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 98.44 | |
| PLN02352 | 758 | phospholipase D epsilon | 98.43 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 98.29 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.01 | |
| cd08689 | 109 | C2_fungal_Pkc1p C2 domain found in protein kinase | 97.9 | |
| KOG1031 | 1169 | consensus Predicted Ca2+-dependent phospholipid-bi | 97.81 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.8 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 97.68 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 97.67 | |
| cd08622 | 276 | PI-PLCXDc_CG14945_like Catalytic domain of Drosoph | 97.58 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.52 | |
| cd08587 | 288 | PI-PLCXDc_like Catalytic domain of phosphatidylino | 97.51 | |
| cd04012 | 171 | C2A_PI3K_class_II C2 domain first repeat present i | 97.14 | |
| cd08398 | 158 | C2_PI3K_class_I_alpha C2 domain present in class I | 97.12 | |
| cd08616 | 290 | PI-PLCXD1c Catalytic domain of phosphatidylinosito | 97.08 | |
| cd08693 | 173 | C2_PI3K_class_I_beta_delta C2 domain present in cl | 97.03 | |
| cd08683 | 143 | C2_C2cd3 C2 domain found in C2 calcium-dependent d | 96.97 | |
| cd08380 | 156 | C2_PI3K_like C2 domain present in phosphatidylinos | 96.96 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 96.81 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 96.67 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 96.64 | |
| cd08397 | 159 | C2_PI3K_class_III C2 domain present in class III p | 96.59 | |
| cd08556 | 189 | GDPD Glycerophosphodiester phosphodiesterase domai | 96.59 | |
| cd08582 | 233 | GDPD_like_2 Glycerophosphodiester phosphodiesteras | 96.57 | |
| cd08562 | 229 | GDPD_EcUgpQ_like Glycerophosphodiester phosphodies | 96.54 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 96.43 | |
| cd08399 | 178 | C2_PI3K_class_I_gamma C2 domain present in class I | 96.29 | |
| cd08684 | 103 | C2A_Tac2-N C2 domain first repeat found in Tac2-N | 96.28 | |
| cd08579 | 220 | GDPD_memb_like Glycerophosphodiester phosphodieste | 96.25 | |
| PF03009 | 256 | GDPD: Glycerophosphoryl diester phosphodiesterase | 96.17 | |
| cd08563 | 230 | GDPD_TtGDE_like Glycerophosphodiester phosphodiest | 96.04 | |
| cd08567 | 263 | GDPD_SpGDE_like Glycerophosphodiester phosphodiest | 95.9 | |
| cd08577 | 228 | PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic | 95.79 | |
| cd08619 | 285 | PI-PLCXDc_plant Catalytic domain of phosphatidylin | 95.72 | |
| PF00792 | 142 | PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I | 95.61 | |
| cd08620 | 281 | PI-PLCXDc_like_1 Catalytic domain of uncharacteriz | 95.6 | |
| cd08565 | 235 | GDPD_pAtGDE_like Glycerophosphodiester phosphodies | 95.54 | |
| cd08566 | 240 | GDPD_AtGDE_like Glycerophosphodiester phosphodiest | 95.35 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 95.2 | |
| cd08573 | 258 | GDPD_GDE1 Glycerophosphodiester phosphodiesterase | 95.13 | |
| cd08568 | 226 | GDPD_TmGDE_like Glycerophosphodiester phosphodiest | 95.05 | |
| cd08564 | 265 | GDPD_GsGDE_like Glycerophosphodiester phosphodiest | 94.61 | |
| cd08584 | 192 | PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic | 94.37 | |
| cd08575 | 264 | GDPD_GDE4_like Glycerophosphodiester phosphodieste | 94.23 | |
| KOG3837 | 523 | consensus Uncharacterized conserved protein, conta | 94.01 | |
| cd08561 | 249 | GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste | 93.99 | |
| cd08574 | 252 | GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste | 93.47 | |
| cd08601 | 256 | GDPD_SaGlpQ_like Glycerophosphodiester phosphodies | 92.94 | |
| cd08580 | 263 | GDPD_Rv2277c_like Glycerophosphodiester phosphodie | 92.8 | |
| cd08607 | 290 | GDPD_GDE5 Glycerophosphodiester phosphodiesterase | 92.8 | |
| cd08581 | 229 | GDPD_like_1 Glycerophosphodiester phosphodiesteras | 92.69 | |
| cd08612 | 300 | GDPD_GDE4 Glycerophosphodiester phosphodiesterase | 92.63 | |
| PRK11143 | 355 | glpQ glycerophosphodiester phosphodiesterase; Prov | 92.51 | |
| KOG2060 | 405 | consensus Rab3 effector RIM1 and related proteins, | 92.37 | |
| cd08605 | 282 | GDPD_GDE5_like_1_plant Glycerophosphodiester phosp | 92.34 | |
| cd08600 | 318 | GDPD_EcGlpQ_like Glycerophosphodiester phosphodies | 92.31 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 92.15 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 92.03 | |
| cd08559 | 296 | GDPD_periplasmic_GlpQ_like Periplasmic glycerophos | 91.83 | |
| cd08571 | 302 | GDPD_SHV3_plant Glycerophosphodiester phosphodiest | 91.8 | |
| cd08609 | 315 | GDPD_GDE3 Glycerophosphodiester phosphodiesterase | 91.8 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 91.65 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 91.53 | |
| cd08606 | 286 | GDPD_YPL110cp_fungi Glycerophosphodiester phosphod | 91.49 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 91.47 | |
| PRK09454 | 249 | ugpQ cytoplasmic glycerophosphodiester phosphodies | 91.26 | |
| cd08570 | 234 | GDPD_YPL206cp_fungi Glycerophosphodiester phosphod | 90.96 | |
| cd08602 | 309 | GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie | 90.69 | |
| cd08583 | 237 | PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic | 90.31 | |
| PF10358 | 143 | NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; | 90.29 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 90.28 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 90.27 | |
| cd08604 | 300 | GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi | 89.99 | |
| smart00142 | 100 | PI3K_C2 Phosphoinositide 3-kinase, region postulat | 89.66 | |
| cd08695 | 189 | C2_Dock-B C2 domains found in Dedicator Of CytoKin | 89.38 | |
| PTZ00268 | 380 | glycosylphosphatidylinositol-specific phospholipas | 89.35 | |
| cd08572 | 293 | GDPD_GDE5_like Glycerophosphodiester phosphodieste | 89.27 | |
| cd08610 | 316 | GDPD_GDE6 Glycerophosphodiester phosphodiesterase | 88.84 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 87.95 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 87.77 | |
| cd08694 | 196 | C2_Dock-A C2 domains found in Dedicator Of CytoKin | 86.8 | |
| PF14429 | 184 | DOCK-C2: C2 domain in Dock180 and Zizimin proteins | 86.68 | |
| PF01023 | 44 | S_100: S-100/ICaBP type calcium binding domain; In | 86.46 | |
| COG0584 | 257 | UgpQ Glycerophosphoryl diester phosphodiesterase [ | 86.28 | |
| cd08578 | 300 | GDPD_NUC-2_fungi Putative glycerophosphodiester ph | 86.16 | |
| cd08585 | 237 | GDPD_like_3 Glycerophosphodiester phosphodiesteras | 85.79 | |
| cd08613 | 309 | GDPD_GDE4_like_1 Glycerophosphodiester phosphodies | 85.69 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 85.51 | |
| PF15627 | 156 | CEP76-C2: CEP76 C2 domain | 85.51 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 84.95 | |
| cd08608 | 351 | GDPD_GDE2 Glycerophosphodiester phosphodiesterase | 84.93 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 84.77 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 84.67 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 84.23 | |
| cd08679 | 178 | C2_DOCK180_related C2 domains found in Dedicator O | 84.06 | |
| cd08560 | 356 | GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi | 83.8 | |
| KOG2258 | 341 | consensus Glycerophosphoryl diester phosphodiester | 83.51 | |
| PF09069 | 90 | EF-hand_3: EF-hand; InterPro: IPR015154 Like other | 82.72 | |
| PTZ00183 | 158 | centrin; Provisional | 82.11 | |
| PTZ00184 | 149 | calmodulin; Provisional | 81.97 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 80.22 | |
| PF05386 | 30 | TEP1_N: TEP1 N-terminal domain; InterPro: IPR00885 | 80.19 |
| >PLN02230 phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-166 Score=1358.84 Aligned_cols=590 Identities=61% Similarity=1.010 Sum_probs=506.3
Q ss_pred CCceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHhhhcccc
Q 007473 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHG-GVSIEDAEQIVDQVLQRWHHI 79 (602)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~~~ 79 (602)
||+|++|+ ||.|+|+...+.+|+||..||.+|+++...||+++|.+||+++|+++ ..+.++|++||++|++...+.
T Consensus 7 m~~~~~~~---~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (598)
T PLN02230 7 MGSYKFCL---IFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHI 83 (598)
T ss_pred CccceEEE---EecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhcccc
Confidence 78999999 99999999999999999999999998779999999999999999654 457899999999998654333
Q ss_pred ccccCCCcCHHHHHHHhcCCCCCCCCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEe
Q 007473 80 ARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDL 159 (602)
Q Consensus 80 ~~~~~~~l~~~gF~~~L~S~~~n~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~ 159 (602)
....++.|+++||++||+|.+.|.|.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 84 ~~~~~~~~~~~~F~~yL~s~~~~~~~~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~ 163 (598)
T PLN02230 84 AKFTRRNLTLDDFNYYLFSTDLNPPIADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDL 163 (598)
T ss_pred ccccccccCHHHHHHHHcCcccCCcccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEec
Confidence 33445679999999999998878888889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 007473 160 WPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKE 239 (602)
Q Consensus 160 WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~ 239 (602)
|||++ ++|+||||||||++|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||.++.+....
T Consensus 164 wdg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~ 242 (598)
T PLN02230 164 WPRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQE 242 (598)
T ss_pred cCCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCC
Confidence 99876 67999999999999999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcc-hhh
Q 007473 240 FPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDN-TEA 318 (602)
Q Consensus 240 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (602)
||||++||||||||+|++++.++....... +.......++++.|+.+...+.....+.+.. .......+...++ .+.
T Consensus 243 lpsP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~ 320 (598)
T PLN02230 243 FPSPEELKEKILISTKPPKEYLEANDAKEK-DNGEKGKDSDEDVWGKEPEDLISTQSDLDKV-TSSVNDLNQDDEERGSC 320 (598)
T ss_pred CCChHHHcCCEEEEecCCcccccccccccc-cccccccccchhhhccccccccccccccccc-cccccccccchhccccc
Confidence 999999999999999998765544321111 0111112233334444333222211110000 0000000000000 000
Q ss_pred hccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCC
Q 007473 319 CDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNS 398 (602)
Q Consensus 319 ~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidS 398 (602)
...++...++++|++||+|+.+++++++..+.+..+.+++++||+|+++.++++.++.+|++||++||+||||+|+||||
T Consensus 321 ~~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdS 400 (598)
T PLN02230 321 ESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNS 400 (598)
T ss_pred cccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCC
Confidence 11112335678999999999999999999888877878899999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccC
Q 007473 399 SNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478 (602)
Q Consensus 399 SN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~ 478 (602)
|||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|||....+.+.+|+|+|++|++
T Consensus 401 SNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~ 480 (598)
T PLN02230 401 SNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDG 480 (598)
T ss_pred CCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999976655689998877677889999999999
Q ss_pred cccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccE
Q 007473 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAG 558 (602)
Q Consensus 479 L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lG 558 (602)
|++++++...+.++++||||+|+|+|.|.|..+++|+++.|++||+|||+|+|.+..||+|+|||.|+|+|...+++|+|
T Consensus 481 ~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiG 560 (598)
T PLN02230 481 WLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGG 560 (598)
T ss_pred ccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEE
Confidence 98776666667788999999999999999999999998888899999999999999999999999999999888899999
Q ss_pred EEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 559 QTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 559 q~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|+|+||.+|++|||||||+|..|+++.+++|||||+|.
T Consensus 561 Q~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 561 QTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 99999999999999999999999999999999999873
|
|
| >PLN02222 phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-162 Score=1325.84 Aligned_cols=575 Identities=55% Similarity=0.994 Sum_probs=493.9
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|++|+ ||.|+|+.....+|+||..||.+|++ ...||.++|.+||+++|++..++.++|.+||++|+.. .
T Consensus 5 ~~~~~~---~~~~~~~~~~~~~~~ei~~if~~~~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~------~ 74 (581)
T PLN02222 5 TYKVCF---CFRRRFRYTASEAPREIKTIFEKYSE-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL------L 74 (581)
T ss_pred ceeEEE---EeccccccccCCCcHHHHHHHHHhcC-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh------h
Confidence 799999 99999999999999999999999987 4799999999999999999888899999999998621 1
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCC-CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeec
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPL-GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWP 161 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wd 161 (602)
.++.|+++||++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++|||||||||||
T Consensus 75 ~~~~~~~~gF~~yL~s~-~n~~~~~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wd 153 (581)
T PLN02222 75 HRNGLHLDAFFKYLFGD-NNPPLALHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWP 153 (581)
T ss_pred hccCcCHHHHHHHhcCC-CCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEecc
Confidence 24679999999999985 67777 55789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCC
Q 007473 162 NSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEF 240 (602)
Q Consensus 162 G~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~l 240 (602)
|+++++|+||||||||++|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||+++. +....|
T Consensus 154 g~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~l 233 (581)
T PLN02222 154 NSDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEF 233 (581)
T ss_pred CCCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCC
Confidence 9887778999999999999999999999999999999999999999999999999999999999999999874 446799
Q ss_pred CChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhc
Q 007473 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACD 320 (602)
Q Consensus 241 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (602)
|||++||||||||+|++++..+..... ........+++..++.+.++........+.++ .... ++++++++.
T Consensus 234 psP~~Lk~kilik~K~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~ 305 (581)
T PLN02222 234 PSPNSLKKRIIISTKPPKEYKEGKDDE---VVQKGKDLGDEEVWGREVPSFIQRNKSVDKND--SNGD---DDDDDDDGE 305 (581)
T ss_pred CChHHHCCCEEEEecCCcccccccccc---cccccccccccccccccccccccccccccccc--cccc---ccccccccc
Confidence 999999999999999987654432100 00001111122233444333222111111100 0000 000111112
Q ss_pred cccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCC
Q 007473 321 RVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSN 400 (602)
Q Consensus 321 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 400 (602)
.+.+...++++++|++++.+++++++...++..+.+++++||+|+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 306 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSN 385 (581)
T PLN02222 306 DKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSN 385 (581)
T ss_pred cccccccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCC
Confidence 22333456889999999999988888777766677788999999999999999999999999999999999999999999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+....+..|||....|++.+|+|+|++|++|+
T Consensus 386 ynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~ 465 (581)
T PLN02222 386 YNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWY 465 (581)
T ss_pred CCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999987655557999988787889999999999987
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQT 560 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 560 (602)
++.++...+..+++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|....++|+||+
T Consensus 466 l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~ 545 (581)
T PLN02222 466 FDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQT 545 (581)
T ss_pred CCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEE
Confidence 76555556667889999999999999999999999999999999999999999999999999999999987789999999
Q ss_pred EEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 561 CLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 561 ~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
++||++|++|||||||+|..|+++.+++|||||++.
T Consensus 546 ~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 546 CLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred EcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 999999999999999999999999999999999873
|
|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-159 Score=1308.43 Aligned_cols=578 Identities=62% Similarity=1.040 Sum_probs=494.3
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|..|. ||+|.++...+++|+||..||.+|++++..||+++|.+||+++|++..++.++|++|+++|.+...+...+
T Consensus 18 ~f~~f~---~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~ 94 (599)
T PLN02952 18 NYKMFN---LFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTRY 94 (599)
T ss_pred CHHHHH---HHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccccc
Confidence 577788 99999999999999999999999998889999999999999999998889999999999886443333334
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecC
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPN 162 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG 162 (602)
.+..|+++||++||+|.+.|.|.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||
T Consensus 95 ~~~~l~~~~F~~~l~s~~~~~p~~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 174 (599)
T PLN02952 95 TRHGLNLDDFFHFLLYDDLNGPITPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPG 174 (599)
T ss_pred cccCcCHHHHHHHHcCccccccccccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecC
Confidence 45679999999999998888889889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 007473 163 SAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPS 242 (602)
Q Consensus 163 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPS 242 (602)
+++++|||||||||||+|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||.|+.+....|||
T Consensus 175 ~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~lps 254 (599)
T PLN02952 175 STKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQFPS 254 (599)
T ss_pred CCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCC
Confidence 98888999999999999999999999999999999999999999999999999999999999999999987666779999
Q ss_pred hhhccccEEEecCCCCccccccccCc-ccc--ccc-cCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhh
Q 007473 243 PEELKYRIIISTKPPKERREKKGINN-RKD--ISA-KGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEA 318 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~~~~~~~~~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (602)
|++||||||||+|++++.++...... .+. ... ....++++. +...+.......+ .. ...+...
T Consensus 255 P~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~~--~~~~~~~ 321 (599)
T PLN02952 255 PESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETE---EAQTLESMLFEQE--------AD--SRSDSDQ 321 (599)
T ss_pred hHHhCCCEEEEecCCchhccccccccccccccCCcccccCCcccc---ccccccccccccc--------cc--ccccccc
Confidence 99999999999999876554321100 000 000 000000000 0000000000000 00 0000000
Q ss_pred hccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCC
Q 007473 319 CDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNS 398 (602)
Q Consensus 319 ~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidS 398 (602)
.+.+.....++++++|+.|+.+++++.+.+.+...+.+++++||||+++.+++++++.+|++||++||+||||+|+|+||
T Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dS 401 (599)
T PLN02952 322 DDNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITS 401 (599)
T ss_pred hhhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcC
Confidence 01122234567899999999998888777766655666788999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccC
Q 007473 399 SNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478 (602)
Q Consensus 399 SN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~ 478 (602)
|||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||...+.++.|||....|++++|+|+||+|++
T Consensus 402 sNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~ 481 (599)
T PLN02952 402 SNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDG 481 (599)
T ss_pred CCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECcc
Confidence 99999999999999999999999999999999999999999999999999865545679999888888899999999999
Q ss_pred cccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccE
Q 007473 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAG 558 (602)
Q Consensus 479 L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lG 558 (602)
|+++......+.++++||||+|.+.|.|.|..+++|+++.||+||+|||+|+|.+..||+|+|+|.|+|+|..+.++|+|
T Consensus 482 l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiG 561 (599)
T PLN02952 482 WRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGG 561 (599)
T ss_pred cCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEE
Confidence 98764444567778899999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 559 QTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 559 q~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 562 q~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 562 QTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 99999999999999999999999999999999999873
|
|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-159 Score=1299.26 Aligned_cols=557 Identities=43% Similarity=0.697 Sum_probs=486.0
Q ss_pred CCceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccc
Q 007473 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIA 80 (602)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~ 80 (602)
+++|++|+ |++++|+....+ ||||.++|.+|+.+..+|+.++|.+||+++|++..++.+.|++||++|+....
T Consensus 184 ~~~~k~~~---~~~~~~~~~~~~-rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--- 256 (746)
T KOG0169|consen 184 SQTGKLEE---EEFVKFRKELTK-RPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--- 256 (746)
T ss_pred hccceehH---HHHHHHHHhhcc-CchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh---
Confidence 46899999 999999887665 55999999999998999999999999999999999999999999999985432
Q ss_pred cccCCCcCHHHHHHHhcCCCCCC--CCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEE
Q 007473 81 RFTRRSLTVEDFHHYLFSTDLNP--PLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELD 158 (602)
Q Consensus 81 ~~~~~~l~~~gF~~~L~S~~~n~--~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD 158 (602)
....+.|+++||++||+|+++|. |.+..|||||++|||||||+||||||||||||.|+||+|+||+||++||||||||
T Consensus 257 ~~~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD 336 (746)
T KOG0169|consen 257 FRRHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELD 336 (746)
T ss_pred ccccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEe
Confidence 11235699999999999988776 7799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CC
Q 007473 159 LWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CL 237 (602)
Q Consensus 159 ~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~ 237 (602)
||||++ ++|+|||||||||+|.|++||+||++|||++|+|||||||||||+++||++||++|++||||+||+++.+ ..
T Consensus 337 ~Wdg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~ 415 (746)
T KOG0169|consen 337 CWDGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSL 415 (746)
T ss_pred cccCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcc
Confidence 999988 6899999999999999999999999999999999999999999999999999999999999999998865 68
Q ss_pred CCCCChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchh
Q 007473 238 KEFPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTE 317 (602)
Q Consensus 238 ~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (602)
..||||++||||||||+|++++.+..... ++.+.. ..+++++.+.+.+ .+....
T Consensus 416 ~~lPSPe~LK~KILik~Kk~~~~~~~~~~--------------------~~~~~~--~~d~~~~~e~s~e----~~~~~~ 469 (746)
T KOG0169|consen 416 KELPSPEELKNKILIKGKKLKELLEADSK--------------------EPSSFE--VTDEDEDKESSTE----NDKSET 469 (746)
T ss_pred ccCcCHHHHhcCEEEecCCCCcccccccc--------------------cccccc--ccccccccccccc----cccccc
Confidence 99999999999999999998765543210 000000 0000000000000 000000
Q ss_pred hhccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCC
Q 007473 318 ACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVN 397 (602)
Q Consensus 318 ~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~Rid 397 (602)
..+.+....++++|++||.|+.+++++++...++.+ .+++++||+|+++.|+++..+.+|++||+++|+||||+|+|+|
T Consensus 470 ~~~~~~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~d 548 (746)
T KOG0169|consen 470 DGQKKSRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVD 548 (746)
T ss_pred ccccchhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccC
Confidence 112223336889999999999999999888877765 5788999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCC-CCcceeEEEEEEec
Q 007473 398 SSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEK-LPVKKTLKVKAYMG 476 (602)
Q Consensus 398 SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~~L~V~Visa 476 (602)
||||||+.||++|||||||||||+|++||||+|||++||||||||||.+||+++ ..|+|... .|+..+|+|+|++|
T Consensus 549 SSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~---~~F~P~~~~~~~~~tL~IkI~sG 625 (746)
T KOG0169|consen 549 SSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSG---STFDPKSNLPPVKKTLKIKIISG 625 (746)
T ss_pred CCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCC---CccCCCCCCCCCCceeEEEEEec
Confidence 999999999999999999999999999999999999999999999999999943 58999665 44555899999999
Q ss_pred cCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCC
Q 007473 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDE 555 (602)
Q Consensus 477 ~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd 555 (602)
++++.++..+.. ...+||||.|+|.|.|.|+.+++|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++||
T Consensus 626 q~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~dd 703 (746)
T KOG0169|consen 626 QGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDD 703 (746)
T ss_pred CcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCccc
Confidence 999876544432 355799999999999999999999977655 89999999999999999999999999999999999
Q ss_pred ccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 556 FAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 556 ~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|+||+|+|+.+|++|||||||+|..|+.+..++|||||+|.+
T Consensus 704 F~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~~ 745 (746)
T KOG0169|consen 704 FIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIVE 745 (746)
T ss_pred ccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEec
Confidence 999999999999999999999999999999999999999976
|
|
| >PLN02228 Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-157 Score=1288.36 Aligned_cols=558 Identities=48% Similarity=0.830 Sum_probs=480.2
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|..|. ||.|+++..-..+|+||..||.+|+++ ..||.++|.+||+++|++...+.+.|++||++|++... ..
T Consensus 4 ~~~~~~---~~~~~~~~~~~~~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~---~~ 76 (567)
T PLN02228 4 SFKVCF---CCSRSFKEKTREPPVSIKRLFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNV---FH 76 (567)
T ss_pred cceEEE---EeCCcCCcCCCCCcHHHHHHHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchh---hc
Confidence 689998 999999999999999999999999976 58999999999999999987888999999999984311 11
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCC--CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEee
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPL--GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLW 160 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~--~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 160 (602)
.++.|+++||++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 77 ~~~~~~~~gF~~yl~s~-~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 155 (567)
T PLN02228 77 HHGLVHLNAFYRYLFSD-TNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLW 155 (567)
T ss_pred ccCccCHHHHHHHhcCc-ccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEec
Confidence 23569999999999985 57665 5679999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCC
Q 007473 161 PNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240 (602)
Q Consensus 161 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~l 240 (602)
||+++++|||||||||||+|+|+|||+||++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+....|
T Consensus 156 dg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~l 235 (567)
T PLN02228 156 PNPSGNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHF 235 (567)
T ss_pred cCCCCCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCC
Confidence 99887889999999999999999999999999999999999999999999999999999999999999999886667899
Q ss_pred CChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhc
Q 007473 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACD 320 (602)
Q Consensus 241 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (602)
|||++||||||||+|++++..+...... . ..+++++..+.. .. +. ..... + .
T Consensus 236 psP~~Lk~kilik~Kk~~~~~~~~~~~~---~--~~~~~~~~~~~~-~~---------~~-----------~~~~~-~-~ 287 (567)
T PLN02228 236 PSPEELKNKILISTKPPKEYLESKTVQT---T--RTPTVKETSWKR-VA---------DA-----------ENKIL-E-E 287 (567)
T ss_pred CChHHHCCCEEEEecCCccccccccccc---c--cccccccccccc-cc---------cc-----------hhhcc-c-c
Confidence 9999999999999999754433211000 0 000000000000 00 00 00000 0 0
Q ss_pred cccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCC
Q 007473 321 RVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSN 400 (602)
Q Consensus 321 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 400 (602)
.+.....+++|++|++++..++++++.......+...+++||||+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 288 ~~~~~~~~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSN 367 (567)
T PLN02228 288 YKDEESEAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSN 367 (567)
T ss_pred ccccchhhhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCC
Confidence 01112346789999999887776666655444455667999999999999999999999999999999999999999999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.||++|||||||||||+|++||||+|||++||+|||||||++||+.. ..|+|....|++.+|+|+||+|++|+
T Consensus 368 y~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~ViSGq~l~ 444 (567)
T PLN02228 368 YDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWD 444 (567)
T ss_pred CCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEEEECCccC
Confidence 999999999999999999999999999999999999999999999999853 47999887777778999999999987
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCee-ccEEEEEeecCCccEEEEEEEecCCCCCCCccEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQ 559 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 559 (602)
+++.....+..+++||||+|++.|.|.|..++||+++.|++||+| ||+|+|.+..||+|+|||.|+|+|..+.++|+||
T Consensus 445 lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq 524 (567)
T PLN02228 445 LDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQ 524 (567)
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEE
Confidence 654444445567899999999999999999999999999999999 9999999999999999999999997778999999
Q ss_pred EEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 560 TCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 560 ~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
+++||++|++|||||||+|..|+++.+++|||||.+.+..
T Consensus 525 ~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~~~~ 564 (567)
T PLN02228 525 TCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALDPPY 564 (567)
T ss_pred EEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEcCcc
Confidence 9999999999999999999999999999999999998754
|
|
| >PLN02223 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-152 Score=1228.71 Aligned_cols=524 Identities=43% Similarity=0.757 Sum_probs=454.1
Q ss_pred cccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHH---HHHhCCCCCCHHHHHHHHHHHhhhcccccccc-CCCc
Q 007473 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFL---VEVQGHGGVSIEDAEQIVDQVLQRWHHIARFT-RRSL 87 (602)
Q Consensus 12 ~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~~l 87 (602)
-|.|+|+.+.+.+++||..+|.+|+++...|+.++|.+|| .++|+|..++.++|+.|++++.+...++..+. .+.|
T Consensus 2 ~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l 81 (537)
T PLN02223 2 LLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCL 81 (537)
T ss_pred ccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhcccc
Confidence 4789999999999999999999999888999999999999 99999999999999999999986554444443 3779
Q ss_pred CHHHHHHHhcCCCCCCCCCCCC-CcCCCCcccccccccCCcccccCCccCCC-CChHHHHHHHhcCCcEEEEEeecCCCC
Q 007473 88 TVEDFHHYLFSTDLNPPLGNQV-YQDMTAPLSHYFIYTGHNSYLIGNQFSSD-CSDVPITKALKRGVRVIELDLWPNSAK 165 (602)
Q Consensus 88 ~~~gF~~~L~S~~~n~~~~~~v-~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~WdG~~~ 165 (602)
+++||++||+|++.|.|.+..| +|||++|||||||||||||||+||||.|+ ||+|+|++||++||||||||||||+.
T Consensus 82 ~~~~f~~~L~s~~~n~~~~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~~- 160 (537)
T PLN02223 82 ELDHLNEFLFSTELNPPIGDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGK- 160 (537)
T ss_pred CHHHHHHHhcCcccCCccccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCCC-
Confidence 9999999999988888887778 99999999999999999999999999999 99999999999999999999998754
Q ss_pred CCceEeecccccccchHHHHHHHHhhcccccC-CCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCCh
Q 007473 166 DDVLVLHGRTLTTPVELIKCLRAIKENAFSAS-PYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSP 243 (602)
Q Consensus 166 ~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP 243 (602)
++|+|+|||||||+|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....||||
T Consensus 161 ~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~lPSP 240 (537)
T PLN02223 161 DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPSP 240 (537)
T ss_pred CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccCCCh
Confidence 67899999999999999999999999999998 9999999999999999999999999999999999774 557899999
Q ss_pred hhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhcccc
Q 007473 244 EELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVT 323 (602)
Q Consensus 244 ~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (602)
++||||||||+|++++.++... ++ +. . . . +++ .+..
T Consensus 241 ~~Lk~kIlik~K~~~~~~~~~~--------------~~---~~-~-~----~--~~~-------------~~~~------ 276 (537)
T PLN02223 241 AELQNKILISRRPPKELLYAKA--------------DD---GG-V-G----V--RNE-------------LEIQ------ 276 (537)
T ss_pred HHhCCCEEEEcCCCcccccccc--------------cc---cc-c-c----c--ccc-------------cccc------
Confidence 9999999999998765433210 00 00 0 0 0 000 0000
Q ss_pred ccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHh--cchhHHHhhccceeeEecCCcC-CCCCC
Q 007473 324 RASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVS--YGTDVVRFTQKNILRIYPKQTR-VNSSN 400 (602)
Q Consensus 324 ~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~--~~~~~~~~~~~~l~RvYP~g~R-idSSN 400 (602)
.....++|.+++.++..++++.+ .+++|.++.++.+. ++.++++||++||+||||+|+| +||||
T Consensus 277 ~~~~~~~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 277 EGPADKNYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred ccccccceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 01224678899999887765432 33445555555432 4678999999999999999999 59999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.+|++|||||||||||+|++||||+|||++||+|||||||++||+.++. ..|||....+.+.+|+|+||+|++|+
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~-~~FdP~~~~~~~~~L~V~Visgq~~~ 422 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPS-GVFYPTENPVVVKILKVKIYMGDGWI 422 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcc-cccCCCCCcccceEEEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999987654 37999765556788999999999997
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQT 560 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 560 (602)
.+++++. +..+++||||+|+|.|.|.|+.+++|++..|++||+|||+|+|.+.+||+|+|||.|+|+|....++|+||+
T Consensus 423 ~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~ 501 (537)
T PLN02223 423 VDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQT 501 (537)
T ss_pred CCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEE
Confidence 5443332 445789999999999999999988998777779999999999999999999999999999988889999999
Q ss_pred EEeCCCccCccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 561 CLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 561 ~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
++||.+|++|||||||+|..|+++..++|||||+|
T Consensus 502 ~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~ 536 (537)
T PLN02223 502 CLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 536 (537)
T ss_pred ecchHHhcCCceeEeccCCCcCCCCCceEEEEEEe
Confidence 99999999999999999999999999999999997
|
|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-142 Score=1158.79 Aligned_cols=555 Identities=30% Similarity=0.464 Sum_probs=441.4
Q ss_pred CCCCchhHHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCC--------CHHHHHHHHHHHhhhccccccccCCCcCHHH
Q 007473 21 EAGPPADVKEMFKKYAEGG-THMTAEQLWQFLVEVQGHGGV--------SIEDAEQIVDQVLQRWHHIARFTRRSLTVED 91 (602)
Q Consensus 21 ~~~~r~el~~if~~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~--------~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~g 91 (602)
.++.|+||+.||.+++++. ++||.++|.+||++.|+++.+ +..++..||++|++.... ..++.|+.+|
T Consensus 216 klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~---a~~gqms~dg 292 (1189)
T KOG1265|consen 216 KLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN---AEKGQMSTDG 292 (1189)
T ss_pred hcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh---hhccccchhh
Confidence 4688999999999999886 999999999999999999864 468899999999965321 2468899999
Q ss_pred HHHHhcCCCCCCCC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCC
Q 007473 92 FHHYLFSTDLNPPL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSA-KDD 167 (602)
Q Consensus 92 F~~~L~S~~~n~~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~-~~~ 167 (602)
|.+||++ +.|.++ ....++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+ .+|
T Consensus 293 f~ryl~g-dEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~E 371 (1189)
T KOG1265|consen 293 FVRYLMG-DENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEE 371 (1189)
T ss_pred hHHHhhC-CccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCC
Confidence 9999997 568776 45578999999999999999999999999999999999999999999999999999943 357
Q ss_pred ceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCC
Q 007473 168 VLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPS 242 (602)
Q Consensus 168 piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPS 242 (602)
|||+||.|+|+.|.|+|||+||+++||+|||||||||+|||||+.||.+||+||++||||+|++.|.+ +...|||
T Consensus 372 PvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPs 451 (1189)
T KOG1265|consen 372 PVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPS 451 (1189)
T ss_pred ceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996633 3478999
Q ss_pred hhhccccEEEecCCCCcc-cccc--ccCc--cccccccCCCCc--cc----ccC-----CC----CCCCCCCcCCCCCCc
Q 007473 243 PEELKYRIIISTKPPKER-REKK--GINN--RKDISAKGKIST--ED----VLG-----KE----PPDLTANQADDERSD 302 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~-~~~~--~~~~--~~~~~~~~~~~~--~~----~~~-----~~----~~~~~~~~~~~~~~~ 302 (602)
|++||+|||||+||..-. .+.. .... .++.+.....+. ++ ..+ .+ -+.+..+....++..
T Consensus 452 P~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~ 531 (1189)
T KOG1265|consen 452 PEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAH 531 (1189)
T ss_pred HHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccc
Confidence 999999999999975311 1110 0000 000000000000 00 000 00 000000000000000
Q ss_pred -c--ccCcCCCCCCc-c---hhhhccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcc
Q 007473 303 -Y--DTSEHNQCDED-N---TEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYG 375 (602)
Q Consensus 303 -~--~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~ 375 (602)
+ +.+....+.++ + .++........++++.|+||.|.....+.+|.-+-+ ...+++|+||+|+++..++++++
T Consensus 532 ~E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~ 610 (1189)
T KOG1265|consen 532 PELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSP 610 (1189)
T ss_pred hhhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCc
Confidence 0 00000000000 0 000000112245678899998865444555544433 34688999999999999999999
Q ss_pred hhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCC
Q 007473 376 TDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQ 455 (602)
Q Consensus 376 ~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~ 455 (602)
.+||+||++||+||||+|+|||||||+||.|||+|||||||||||+|.+||||.|||..||+|||+|||+|||++. +
T Consensus 611 iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r 687 (1189)
T KOG1265|consen 611 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---R 687 (1189)
T ss_pred hHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---c
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984 5
Q ss_pred cCCCCCCCCc----ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCccc--ccccCCCCC-CCCeecc-
Q 007473 456 VFDPKEKLPV----KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKM--KSTKKKVDN-WTPVWDD- 527 (602)
Q Consensus 456 ~f~p~~~~p~----~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k--~kTkvi~nn-~nPvWNE- 527 (602)
.|||+...++ ..++.|+|||||-|.- . .+..||+|.+.|.|.|..+ +||+++.+| +||+|+|
T Consensus 688 ~fdPFse~~VdgvIA~t~sV~VISgqFLSd------r----kvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~ee 757 (1189)
T KOG1265|consen 688 QFDPFSESPVDGVIAATLSVTVISGQFLSD------R----KVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEE 757 (1189)
T ss_pred CcCCcccCcccceEEeeEEEEEEeeeeccc------c----ccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccC
Confidence 8999987554 5689999999998731 1 1346999999999999764 589998866 8999985
Q ss_pred EEEEE-eecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 528 EFTFP-LTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 528 tf~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
.|.|. |..|++|+|||.|+++. ..||||..+||+.|+.|||||.|++..|+++..+.|||.|.+..
T Consensus 758 pfvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~kd 824 (1189)
T KOG1265|consen 758 PFVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVLKD 824 (1189)
T ss_pred CcccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEeec
Confidence 59995 88999999999999965 67999999999999999999999999999999999999998764
|
|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-131 Score=1066.28 Aligned_cols=538 Identities=29% Similarity=0.431 Sum_probs=415.2
Q ss_pred CCccCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCCCCC---CCCCCcC-C
Q 007473 39 GTHMTAEQLWQFLVEVQGHGGVSI-EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPL---GNQVYQD-M 113 (602)
Q Consensus 39 ~~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n~~~---~~~v~qd-M 113 (602)
...++..+|.+||..+|++.++++ ..+++++.+|-++ .......+.|++++|..||+|. .|+.| ...|..| |
T Consensus 235 ~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D--~~re~~EPyl~v~EFv~fLFSr-eNslWd~k~d~V~~d~M 311 (1267)
T KOG1264|consen 235 ASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD--TMRETAEPYLFVDEFVTFLFSR-ENSLWDSKYDAVDMDDM 311 (1267)
T ss_pred ceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh--hhhhccCcceeHHHHHHHHhhc-ccccccccccccchhhh
Confidence 367899999999999999987664 3456677776543 1122346799999999999985 68877 3557655 9
Q ss_pred CCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcc
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENA 193 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~A 193 (602)
+.|||||||+||||||||||||.++||+|+|+|||++||||||||||||++ +.||||||||+||||.|+||+++||+||
T Consensus 312 n~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd-~~pvIyHG~T~TtKIkf~DVlhtIkdhA 390 (1267)
T KOG1264|consen 312 NNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPD-GKPVIYHGHTRTTKIKFDDVLHTIKDHA 390 (1267)
T ss_pred cCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCC-CCceEEeccceeeeeehHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998 5799999999999999999999999999
Q ss_pred cccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCcccc--ccc--cCc
Q 007473 194 FSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERRE--KKG--INN 268 (602)
Q Consensus 194 F~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~--~~~--~~~ 268 (602)
|++|+||||||||.|||++||+.||+.+|+||||+|++.|.+ +...||||.+||+|||||+||.+...+ ... .++
T Consensus 391 FvtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~ed 470 (1267)
T KOG1264|consen 391 FVTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKED 470 (1267)
T ss_pred eeccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccc
Confidence 999999999999999999999999999999999999998854 478999999999999999999753211 000 000
Q ss_pred c------------------------------------ccccccCCCCcccccCCCCCC-------------CCCCc----
Q 007473 269 R------------------------------------KDISAKGKISTEDVLGKEPPD-------------LTANQ---- 295 (602)
Q Consensus 269 ~------------------------------------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~---- 295 (602)
+ +..+.....+++ .....+|+ +.+..
T Consensus 471 d~~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee-~~kd~s~s~ElH~~E~WFHgkle~R~eAek 549 (1267)
T KOG1264|consen 471 DHKNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEE-VPKDISPSTELHFGEKWFHGKLEGRTEAEK 549 (1267)
T ss_pred cchhhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCccc-ccccCCcchhhccchhhhhcccccchHHHH
Confidence 0 000000000111 00000000 00000
Q ss_pred ------C------------CCCC--Cc-----------------------------------------------------
Q 007473 296 ------A------------DDER--SD----------------------------------------------------- 302 (602)
Q Consensus 296 ------~------------~~~~--~~----------------------------------------------------- 302 (602)
. +++. .|
T Consensus 550 ll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~a 629 (1267)
T KOG1264|consen 550 LLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCA 629 (1267)
T ss_pred HHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhcccccc
Confidence 0 0000 00
Q ss_pred -------------------------------cccC---------------------------------------------
Q 007473 303 -------------------------------YDTS--------------------------------------------- 306 (602)
Q Consensus 303 -------------------------------~~~~--------------------------------------------- 306 (602)
++++
T Consensus 630 eF~m~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~ 709 (1267)
T KOG1264|consen 630 EFEMRLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLG 709 (1267)
T ss_pred ceEEEecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEec
Confidence 0000
Q ss_pred -----------------------------------------------cCCC-------CCCcch---------------h
Q 007473 307 -----------------------------------------------EHNQ-------CDEDNT---------------E 317 (602)
Q Consensus 307 -----------------------------------------------~~~~-------~~~~~~---------------~ 317 (602)
+.+. .+..+. +
T Consensus 710 t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~D 789 (1267)
T KOG1264|consen 710 TSAFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSD 789 (1267)
T ss_pred cHHHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcc
Confidence 0000 000000 0
Q ss_pred h------------------------------------------------------------------------------h
Q 007473 318 A------------------------------------------------------------------------------C 319 (602)
Q Consensus 318 ~------------------------------------------------------------------------------~ 319 (602)
+ +
T Consensus 790 ELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~ 869 (1267)
T KOG1264|consen 790 ELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQG 869 (1267)
T ss_pred cccccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccc
Confidence 0 0
Q ss_pred c--------------------------------------------cc--------cccccccccccceEEecccccC--c
Q 007473 320 D--------------------------------------------RV--------TRASGTLAYKRLIAIHNGKLKG--C 345 (602)
Q Consensus 320 ~--------------------------------------------~~--------~~~~~~~~~~~li~~~~~~~~~--~ 345 (602)
. .+ ....++.|+|+||+|+...|+. .
T Consensus 870 ~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~~~ 949 (1267)
T KOG1264|consen 870 KNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTKDN 949 (1267)
T ss_pred cCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcccc
Confidence 0 00 0012334455555555444421 1
Q ss_pred hhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcce
Q 007473 346 LKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSL 425 (602)
Q Consensus 346 ~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m 425 (602)
+. ++....|+||.|+||.|++...+.+|+.||+++|+||||+|.|+|||||||+++|+||||||||||||.|++|
T Consensus 950 ~~-----n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpM 1024 (1267)
T KOG1264|consen 950 LE-----NPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPM 1024 (1267)
T ss_pred cc-----cHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchh
Confidence 11 1122347899999999999888889999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccccceeeecCCccCCCCCCCCcCCCCCCC---C-cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEE
Q 007473 426 WLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKL---P-VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVG 501 (602)
Q Consensus 426 ~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~---p-~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~ 501 (602)
|||+|+|+.||+|||||||++||.. .|||.... . .+.+|.|+||.|+.|+.. ..+..-|||+|+
T Consensus 1025 QmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevE 1092 (1267)
T KOG1264|consen 1025 QMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVE 1092 (1267)
T ss_pred hhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEE
Confidence 9999999999999999999999974 68887531 1 246799999999988632 113345899999
Q ss_pred EecCCCCcccccccCCC-CCCCCeec-cEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCC
Q 007473 502 IAGVPADKKMKSTKKKV-DNWTPVWD-DEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDR 579 (602)
Q Consensus 502 i~G~p~d~~k~kTkvi~-nn~nPvWN-Etf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~ 579 (602)
|.|.+.|..+++|++|. |++||+|| |+|+|.|.+|++|+|||.|+|.|+++...||||+++||.+|+.|||.|||+|.
T Consensus 1093 iiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ 1172 (1267)
T KOG1264|consen 1093 IIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNG 1172 (1267)
T ss_pred EeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccC
Confidence 99999999888877665 55899999 99999999999999999999999999888999999999999999999999999
Q ss_pred CCCccCCeEEEEEEEEEEc
Q 007473 580 KGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 580 ~g~~l~~asL~v~i~~~e~ 598 (602)
+.+.++.++|||.|++..+
T Consensus 1173 ySEdlELaSLLv~i~m~~~ 1191 (1267)
T KOG1264|consen 1173 YSEDLELASLLVFIEMRPV 1191 (1267)
T ss_pred chhhhhhhhheeeeEeccc
Confidence 9999999999999998653
|
|
| >cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-110 Score=832.05 Aligned_cols=257 Identities=33% Similarity=0.524 Sum_probs=236.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +|||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999773 446799999999999999999752
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+++++++|+.|..++.++++..
T Consensus 150 ----------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~ 171 (258)
T cd08629 150 ----------------------------------------------------------LVPELSDMIIYCKSVHFGGFSS 171 (258)
T ss_pred ----------------------------------------------------------ccHHHHHHHHHhcCCCCCCccc
Confidence 1244666666666666666766
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
....++..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 172 ~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN 251 (258)
T cd08629 172 PGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVY 251 (258)
T ss_pred hhhcCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhh
Confidence 55434456789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 252 ~G~F~~N 258 (258)
T cd08629 252 LGCFQDN 258 (258)
T ss_pred hchhcCC
Confidence 9999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain |
| >cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-109 Score=822.61 Aligned_cols=252 Identities=36% Similarity=0.510 Sum_probs=223.0
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC--CCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES--ECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~L------ 153 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRAL------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhh------
Confidence 999999999999999999999999999999999999999998652 345789999999999999999853211
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++|+.+..+..+.++.
T Consensus 154 ----------------------------------------------------------------s~l~~y~~~~~~~~~~ 169 (254)
T cd08633 154 ----------------------------------------------------------------SDLVKYTKSVRVHDIE 169 (254)
T ss_pred ----------------------------------------------------------------hHHhhhcccCCcCccc
Confidence 1111111111111121
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
... ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 170 ~~~---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~l 246 (254)
T cd08633 170 TEA---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQL 246 (254)
T ss_pred ccc---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHh
Confidence 110 12468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 247 N~g~F~~N 254 (254)
T cd08633 247 NRAKFSAN 254 (254)
T ss_pred hcccccCC
Confidence 99999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-109 Score=824.87 Aligned_cols=254 Identities=36% Similarity=0.547 Sum_probs=224.2
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCcccc
Q 007473 189 IKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977432 47899999999999999997421
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
+++|+.|..+..
T Consensus 158 --------------------------------------------------------------------ls~lv~y~~~~k 169 (261)
T cd08624 158 --------------------------------------------------------------------MSSLVNYIQPTK 169 (261)
T ss_pred --------------------------------------------------------------------chhhhcccCCcC
Confidence 122222222222
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCC
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYG 422 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D 422 (602)
+.+|....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|
T Consensus 170 f~~f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D 248 (261)
T cd08624 170 FVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMD 248 (261)
T ss_pred CCCcccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCC
Confidence 22332222111 23468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccc
Q 007473 423 KSLWLMHGMFRAN 435 (602)
Q Consensus 423 ~~m~lN~~~F~~N 435 (602)
++||||+|||++|
T Consensus 249 ~~M~LN~G~F~~n 261 (261)
T cd08624 249 LPMQQNMALFEFN 261 (261)
T ss_pred hhhhhhcccccCC
Confidence 9999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-109 Score=825.25 Aligned_cols=256 Identities=35% Similarity=0.561 Sum_probs=236.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998741
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
+++++++|+.|+.++.+++|.
T Consensus 151 -----------------------------------------------------------i~~els~L~~y~~~~~~~~~~ 171 (258)
T cd08630 151 -----------------------------------------------------------ISPELSALAVYCQATRLRTLE 171 (258)
T ss_pred -----------------------------------------------------------chHHHHhhHhhcccccCCCcc
Confidence 135678888887777777776
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..... ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 172 ~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~L 250 (258)
T cd08630 172 PAPVQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDL 250 (258)
T ss_pred hhhhc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhh
Confidence 55321 23458999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 251 N~G~F~~N 258 (258)
T cd08630 251 NAGRFLVN 258 (258)
T ss_pred hcccccCC
Confidence 99999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh |
| >cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-109 Score=817.61 Aligned_cols=251 Identities=31% Similarity=0.511 Sum_probs=221.7
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++ .+....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 99999999999999999999999999999999999999998765 2346789999999999999999852111
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++|+.+..+..+.++.
T Consensus 154 ----------------------------------------------------------------s~l~~~~~~~~~~~~~ 169 (253)
T cd08632 154 ----------------------------------------------------------------SDLVVYTNSVAAQDIV 169 (253)
T ss_pred ----------------------------------------------------------------HhhhhhccCcccccch
Confidence 1111111111111111
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
+. ....+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 170 ~~----~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~L 245 (253)
T cd08632 170 DD----GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQL 245 (253)
T ss_pred hc----CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHh
Confidence 10 11347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 246 N~g~F~~n 253 (253)
T cd08632 246 NRAKFMVN 253 (253)
T ss_pred hcccccCC
Confidence 99999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-109 Score=822.86 Aligned_cols=255 Identities=35% Similarity=0.550 Sum_probs=226.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+.-
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998620
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++++++|+.|..+..+.++.
T Consensus 151 ------------------------------------------------------------~~els~L~~y~~~~~~~~~~ 170 (257)
T cd08595 151 ------------------------------------------------------------AKALSDLVIYTKSEKFCSFT 170 (257)
T ss_pred ------------------------------------------------------------ChhHHHHhhhcCCcCCCCcc
Confidence 11234444443332223332
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..... ...++++||+|+++.++++.++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 171 ~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~L 249 (257)
T cd08595 171 HSRDN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDL 249 (257)
T ss_pred ccccc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhh
Confidence 21111 12357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 250 N~G~F~~N 257 (257)
T cd08595 250 QNGKFLDN 257 (257)
T ss_pred hcCcccCC
Confidence 99999987
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) |
| >cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-109 Score=822.51 Aligned_cols=256 Identities=34% Similarity=0.536 Sum_probs=229.1
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999751
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
+.+++++|+.|..+..+.++.
T Consensus 151 -----------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~ 171 (258)
T cd08631 151 -----------------------------------------------------------LSPELSDCVIYCKSVSFRSFT 171 (258)
T ss_pred -----------------------------------------------------------ccHHHHHhHhhhcccccCCcc
Confidence 123345555554444333343
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..-.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 172 ~~~~~-~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 250 (258)
T cd08631 172 HSREH-YHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDL 250 (258)
T ss_pred ccccc-CccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHh
Confidence 22111 12357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 251 N~G~F~~N 258 (258)
T cd08631 251 NDGLFRQN 258 (258)
T ss_pred hcchhcCC
Confidence 99999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which |
| >cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-108 Score=818.09 Aligned_cols=249 Identities=34% Similarity=0.521 Sum_probs=223.8
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999977 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC---C--CCCCCCChhhccccEEEecCCCCcccccc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES---E--CLKEFPSPEELKYRIIISTKPPKERREKK 264 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 264 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+.+
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998752 1 24689999999999999998731
Q ss_pred ccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccC
Q 007473 265 GINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKG 344 (602)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 344 (602)
++++|+.|..+..+.
T Consensus 154 -----------------------------------------------------------------els~l~~y~~~~k~~ 168 (254)
T cd08596 154 -----------------------------------------------------------------ELSDLVIYCQAVKFP 168 (254)
T ss_pred -----------------------------------------------------------------HHHHHHHHhcCccCC
Confidence 122333332222223
Q ss_pred chhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcc
Q 007473 345 CLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKS 424 (602)
Q Consensus 345 ~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~ 424 (602)
++. .+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++
T Consensus 169 ~~~-----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~ 243 (254)
T cd08596 169 GLS-----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLP 243 (254)
T ss_pred CCC-----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChH
Confidence 332 123568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccccc
Q 007473 425 LWLMHGMFRAN 435 (602)
Q Consensus 425 m~lN~~~F~~N 435 (602)
||||+|||++|
T Consensus 244 m~LN~G~F~~N 254 (254)
T cd08596 244 MHLNAAMFEAN 254 (254)
T ss_pred HHhhhchhcCC
Confidence 99999999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core |
| >cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-108 Score=815.75 Aligned_cols=251 Identities=35% Similarity=0.522 Sum_probs=220.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCccccc
Q 007473 189 IKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
|++|||++|+||||||||||||++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+..+..
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L~-- 158 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSLV-- 158 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhhh--
Confidence 999999999999999999999999999999999999999999976432 4689999999999999999731100
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
+|..+..+
T Consensus 159 ------------------------------------------------------------------------~y~~~~~~ 166 (257)
T cd08626 159 ------------------------------------------------------------------------NYAQPVKF 166 (257)
T ss_pred ------------------------------------------------------------------------cccccCCC
Confidence 00000000
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++....+. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|+
T Consensus 167 ~~~~~~~~~-~~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08626 167 QGFDVAEER-NIHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDL 245 (257)
T ss_pred CCcCchhhc-CCCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCCh
Confidence 111111111 1135789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||+.|
T Consensus 246 ~m~LN~G~F~~n 257 (257)
T cd08626 246 GMQLNQGKFEYN 257 (257)
T ss_pred hHHhhhccccCC
Confidence 999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-107 Score=814.72 Aligned_cols=251 Identities=34% Similarity=0.554 Sum_probs=221.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSA-KDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhccccEEEecCCCCcccc
Q 007473 189 IKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
|++|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~--- 157 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSN--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhc---
Confidence 999999999999999999999 59999999999999999999997743 346899999999999999997411
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
|++|..+..
T Consensus 158 -----------------------------------------------------------------------Lv~y~~~v~ 166 (258)
T cd08623 158 -----------------------------------------------------------------------LVNYIQPVK 166 (258)
T ss_pred -----------------------------------------------------------------------ccccccCcc
Confidence 111111111
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCC
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYG 422 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D 422 (602)
+.+|...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|
T Consensus 167 f~~f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d 245 (258)
T cd08623 167 FESFEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVD 245 (258)
T ss_pred cCCccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCC
Confidence 2222211111 123578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccc
Q 007473 423 KSLWLMHGMFRAN 435 (602)
Q Consensus 423 ~~m~lN~~~F~~N 435 (602)
++||||+|||+.|
T Consensus 246 ~~M~LN~G~F~~~ 258 (258)
T cd08623 246 LSMQINMGMYEYN 258 (258)
T ss_pred cchhhhcccccCC
Confidence 9999999999986
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-107 Score=811.25 Aligned_cols=251 Identities=37% Similarity=0.542 Sum_probs=221.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCC-CCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAK-DDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~-~~piv~HG~Tlts~i~f~dvi~a 188 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCccccc
Q 007473 189 IKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
|++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+. ...||||++||||||||+|+..+..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L~-- 158 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSLV-- 158 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhhh--
Confidence 999999999999999999999999999999999999999999987432 3689999999999999999732100
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
+|..+..+
T Consensus 159 ------------------------------------------------------------------------~y~~~~~f 166 (257)
T cd08591 159 ------------------------------------------------------------------------NYIQPVKF 166 (257)
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 00000000
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|+
T Consensus 167 ~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08591 167 QGFEVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDL 245 (257)
T ss_pred CCccchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCCh
Confidence 111111111 1235789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||++|
T Consensus 246 ~m~lN~g~F~~N 257 (257)
T cd08591 246 PMQLNQGKFEYN 257 (257)
T ss_pred hHHhhcccccCC
Confidence 999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod |
| >cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-107 Score=815.55 Aligned_cols=250 Identities=36% Similarity=0.540 Sum_probs=221.8
Q ss_pred cCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHHH
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||+ .+++||||||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999995 24689999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhccccEEEecCCCCccccc
Q 007473 190 KENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd---- 157 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST---- 157 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc----
Confidence 99999999999999999999 79999999999999999999997744 246899999999999999997421
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
|++|+.+.++
T Consensus 158 ----------------------------------------------------------------------Lvvy~~~vkf 167 (258)
T cd08625 158 ----------------------------------------------------------------------LVNYIEPVKF 167 (258)
T ss_pred ----------------------------------------------------------------------ccceeccccc
Confidence 1111111112
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++.+.... ...++++||+|+|+.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|+
T Consensus 168 ~~f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~ 246 (258)
T cd08625 168 KSFEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDL 246 (258)
T ss_pred CCchhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCc
Confidence 222222111 1245789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||+.|
T Consensus 247 ~M~LN~G~F~~n 258 (258)
T cd08625 247 AMQLNMGVFEYN 258 (258)
T ss_pred chhhhcccccCC
Confidence 999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-107 Score=815.09 Aligned_cols=256 Identities=38% Similarity=0.587 Sum_probs=231.4
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 335799999999999999999741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+.+++++|+.+..+..++++.+
T Consensus 150 ----------------------------------------------------------i~~els~L~~~~~~~k~~~~~~ 171 (257)
T cd08593 150 ----------------------------------------------------------LAKELSDLVIYCKSVHFKSFEH 171 (257)
T ss_pred ----------------------------------------------------------ccHHHHhhhhhcccccCCChhh
Confidence 1234556655544333455554
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
... .....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 172 ~~~-~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN 250 (257)
T cd08593 172 SKE-NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLN 250 (257)
T ss_pred hcc-cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhh
Confidence 432 2345689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||+.|
T Consensus 251 ~G~F~~N 257 (257)
T cd08593 251 DGLFRQN 257 (257)
T ss_pred hchhcCC
Confidence 9999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is |
| >cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-106 Score=790.31 Aligned_cols=225 Identities=38% Similarity=0.598 Sum_probs=215.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999751
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 ---------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 219 (227)
T cd08594 149 ---------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQL 219 (227)
T ss_pred ---------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHh
Confidence 25789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 220 N~g~F~~N 227 (227)
T cd08594 220 NRAKFRAN 227 (227)
T ss_pred hcccccCC
Confidence 99999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, |
| >cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-106 Score=806.07 Aligned_cols=253 Identities=35% Similarity=0.561 Sum_probs=225.8
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++||||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||+||+++|||+|++++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 446799999999999999998741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
++|+++|+.|+.+..+. +..
T Consensus 150 -----------------------------------------------------------~~eLs~l~~y~~~~~~~-~~~ 169 (254)
T cd08628 150 -----------------------------------------------------------AIELSDLVVYCKPTSKT-KDN 169 (254)
T ss_pred -----------------------------------------------------------CHHHHhhHhhhcccccc-cCC
Confidence 23345555554332211 000
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
+ .++...+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 170 -~-~~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN 247 (254)
T cd08628 170 -L-ENPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLN 247 (254)
T ss_pred -c-ccccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhh
Confidence 1 11223478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 248 ~G~F~~n 254 (254)
T cd08628 248 HALFSLN 254 (254)
T ss_pred hhhccCC
Confidence 9999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-104 Score=795.82 Aligned_cols=259 Identities=36% Similarity=0.530 Sum_probs=232.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999874 4567999999999999999997521
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
.++++++++|+.|..+..+.++..
T Consensus 151 --------------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~ 174 (260)
T cd08597 151 --------------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPT 174 (260)
T ss_pred --------------------------------------------------------ccccHHHHhhhhhhcCcccCCccc
Confidence 012345666666654444444433
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
... ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 175 ~~~-~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN 253 (260)
T cd08597 175 SAQ-NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLN 253 (260)
T ss_pred ccc-ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhh
Confidence 211 2234678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 254 ~g~F~~N 260 (260)
T cd08597 254 TGKFLEN 260 (260)
T ss_pred cccccCC
Confidence 9999987
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment |
| >cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-103 Score=772.78 Aligned_cols=225 Identities=43% Similarity=0.681 Sum_probs=216.4
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-CCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
|+|||++|+||||||||||||.+||.+||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 47999999999999999751
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||
T Consensus 148 --------~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN 219 (226)
T cd08558 148 --------YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLN 219 (226)
T ss_pred --------ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhh
Confidence 257899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||+.|
T Consensus 220 ~g~F~~n 226 (226)
T cd08558 220 QGKFEQN 226 (226)
T ss_pred cccccCC
Confidence 9999976
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki |
| >cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-103 Score=768.20 Aligned_cols=226 Identities=39% Similarity=0.643 Sum_probs=211.3
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I 79 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTI 79 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------- 149 (229)
T cd08627 80 KEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------- 149 (229)
T ss_pred HHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------
Confidence 9999999999999999999999999999999999999999997744 46789999999999999998620
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
.
T Consensus 150 ------------------------------------------------------------~------------------- 150 (229)
T cd08627 150 ------------------------------------------------------------R------------------- 150 (229)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred HhhhcccceEEeeccHHHHHHHHHh-cchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVS-YGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~-~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
+++||+|+++.+++++ .+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 151 ---------~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~L 221 (229)
T cd08627 151 ---------DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQM 221 (229)
T ss_pred ---------ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhh
Confidence 1357889999998754 568999999999999999999999999999999999999999999999999999
Q ss_pred ecccccc
Q 007473 428 MHGMFRA 434 (602)
Q Consensus 428 N~~~F~~ 434 (602)
|+|||+.
T Consensus 222 N~G~F~~ 228 (229)
T cd08627 222 NQALFML 228 (229)
T ss_pred hcCcccC
Confidence 9999984
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-103 Score=772.47 Aligned_cols=229 Identities=37% Similarity=0.640 Sum_probs=216.0
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999975 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3579999999999999999850 0
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+
T Consensus 150 ------------------------------------------------------------~------------------- 150 (231)
T cd08598 150 ------------------------------------------------------------K------------------- 150 (231)
T ss_pred ------------------------------------------------------------C-------------------
Confidence 0
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||
T Consensus 151 ------~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN 224 (231)
T cd08598 151 ------TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLN 224 (231)
T ss_pred ------CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhh
Confidence 01257899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 007473 429 HGMFRA 434 (602)
Q Consensus 429 ~~~F~~ 434 (602)
+|||+.
T Consensus 225 ~G~F~~ 230 (231)
T cd08598 225 EAMFAG 230 (231)
T ss_pred cccccC
Confidence 999985
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro |
| >cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-102 Score=762.40 Aligned_cols=227 Identities=40% Similarity=0.646 Sum_probs=214.9
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999997643 4679999999999999998741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHH-HhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAA-VSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~-~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 -------~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~l 221 (229)
T cd08592 149 -------FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQL 221 (229)
T ss_pred -------cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHh
Confidence 0135789999999998 47889999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 222 N~g~F~~N 229 (229)
T cd08592 222 NQALFMLN 229 (229)
T ss_pred hcccccCC
Confidence 99999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl |
| >cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-101 Score=757.38 Aligned_cols=226 Identities=62% Similarity=1.021 Sum_probs=215.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+||||+|+||+|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-CCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||++|+++|||+||+|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999998631
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHHH-hcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAV-SYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~-~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
++++||+|+++.++.+ .++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 --------~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 220 (228)
T cd08599 149 --------VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWL 220 (228)
T ss_pred --------ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhh
Confidence 2467999999999996 8899999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 221 N~G~F~~N 228 (228)
T cd08599 221 NRGKFRAN 228 (228)
T ss_pred hcccccCC
Confidence 99999987
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi |
| >cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-63 Score=512.31 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=212.1
Q ss_pred CcCCCCcccccccccCCcccccCCccC-----CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFS-----SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
++||++||+||||++||||||+|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 689999999999999999999999998 9999999999999999999999999876 579999999999 999999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCH--HHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhccccEEEecCCCCcccc
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNP--HLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
||++|+++||..++||||||||+||+. +||.+||++|+++||++|++|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521000
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
. ..+...|.. . ..+. .
T Consensus 159 ~--------------~~~~~~~~~---------------------~--------------------~~~~--------~- 174 (274)
T cd00137 159 T--------------GSSNDTGFV---------------------S--------------------FEFS--------T- 174 (274)
T ss_pred c--------------ccccccCcC---------------------C--------------------cccc--------c-
Confidence 0 000000000 0 0000 0
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHH----HHHhcchhHHHhhccceeeEecCCcC---------CCCCCCCCcccccc
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEK----AAVSYGTDVVRFTQKNILRIYPKQTR---------VNSSNYKPMIGWIH 409 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~k----l~~~~~~~~~~~~~~~l~RvYP~g~R---------idSSN~~P~~~W~~ 409 (602)
......+++|++|.++.+ +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 175 ---------~~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~ 245 (274)
T cd00137 175 ---------QKNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNA 245 (274)
T ss_pred ---------ccCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhcc
Confidence 000123568888888854 34445667899999999999999999 99999999999999
Q ss_pred ---cceEeeccccCCCcceeeeccccccc
Q 007473 410 ---GAQMVALNMQGYGKSLWLMHGMFRAN 435 (602)
Q Consensus 410 ---G~QmVALN~QT~D~~m~lN~~~F~~N 435 (602)
|||||||||||.|++|+||+|+|+.|
T Consensus 246 ~~~g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 246 NPAGCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred ccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence 99999999999999999999999976
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a |
| >smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=328.47 Aligned_cols=115 Identities=43% Similarity=0.614 Sum_probs=106.0
Q ss_pred ccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccc
Q 007473 332 KRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGA 411 (602)
Q Consensus 332 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~ 411 (602)
++||+|+.+.++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47899998888877776654322 56899999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCCcceeeecccccccccceeeecCCcc
Q 007473 412 QMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFL 447 (602)
Q Consensus 412 QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~l 447 (602)
|||||||||.|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=334.16 Aligned_cols=118 Identities=33% Similarity=0.552 Sum_probs=90.9
Q ss_pred ccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccc
Q 007473 330 AYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIH 409 (602)
Q Consensus 330 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~ 409 (602)
||++||+|+.+..+.++...-.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 57899998877776666553332 22678999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccccCCCcceeeecccccccccceeeecCCccC
Q 007473 410 GAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLL 448 (602)
Q Consensus 410 G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr 448 (602)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
|
1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=306.36 Aligned_cols=134 Identities=48% Similarity=0.825 Sum_probs=128.2
Q ss_pred cCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 5699999999999999999999999
Q ss_pred hcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhh
Q 007473 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEE 245 (602)
Q Consensus 191 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~ 245 (602)
++||..+.+||||+||+||+.++|.+||++|+++||++|+.++.. ..+.+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=288.64 Aligned_cols=143 Identities=29% Similarity=0.549 Sum_probs=129.1
Q ss_pred CCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhc
Q 007473 113 MTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKEN 192 (602)
Q Consensus 113 M~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 192 (602)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ +++.||||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 469999999999999999999999999
Q ss_pred ccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhccccEEEecCC
Q 007473 193 AFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE---CLKEFPSPEELKYRIIISTKP 256 (602)
Q Consensus 193 AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 256 (602)
+|..+.+||||++++||+.++|..+|++|+++||++|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999998754 467999999999999999875
|
1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B .... |
| >cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=202.42 Aligned_cols=146 Identities=23% Similarity=0.377 Sum_probs=127.7
Q ss_pred cCCCCcccccccccCCcccccC------------Ccc--CCCCChHHHHHHHhcCCcEEEEEeecCCC------------
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIG------------NQF--SSDCSDVPITKALKRGVRVIELDLWPNSA------------ 164 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~------------ 164 (602)
.+.+.||+||+|-.|||+|..| +|+ ....+-.....+|..|+|-+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3568999999999999999998 777 34455667789999999999999996443
Q ss_pred -------CCCceEeecccc---cccchHHHHHHHHhhcccc-cCCCceEEEecCCCCH------------HHHHHHHHHH
Q 007473 165 -------KDDVLVLHGRTL---TTPVELIKCLRAIKENAFS-ASPYPVILTFEDHLNP------------HLQAKVAQMI 221 (602)
Q Consensus 165 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~ma~~l 221 (602)
+...-|+|+.++ |+..+|.+||..||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 344689999998 9999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-ccCCCCC-----CC------CCCCCChhhccccEEEecCC
Q 007473 222 TQTFGA-MLYSPES-----EC------LKEFPSPEELKYRIIISTKP 256 (602)
Q Consensus 222 ~~~~Gd-~L~~~~~-----~~------~~~lPSP~~Lk~KIlik~K~ 256 (602)
+++||+ +|++|+. .. ...+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 22 26899999999999999875
|
This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy |
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=158.53 Aligned_cols=124 Identities=37% Similarity=0.555 Sum_probs=108.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC-CcccccccCCCCCC-CCeeccEEEEEeecCCccEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA-DKKMKSTKKKVDNW-TPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~-d~~k~kTkvi~nn~-nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
.+|+|+|++|++|+... .+..+..||||+|.+.+.+. +..+.||+++.++. ||+|||+|.|.+..++.++|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 46999999999997421 01345679999999988665 56778999988775 99999999999998888899999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|||++.. ++++||++.++++.|..||++++|++..|++...++|+|+|++
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~ 127 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDI 127 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEE
Confidence 9999877 7999999999999999999999999999998888999999987
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking |
| >cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-18 Score=176.92 Aligned_cols=143 Identities=25% Similarity=0.337 Sum_probs=121.2
Q ss_pred CcCCCCcccccccccCCcccccCCccC----------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFS----------SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT- 178 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts- 178 (602)
..||+.||++|+|-.|||+|..+..-. +....-.+...|.+|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 369999999999999999999876532 233334578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC----CCCCCCChhhcc-
Q 007473 179 ------PVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE----CLKEFPSPEELK- 247 (602)
Q Consensus 179 ------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~----~~~~lPSP~~Lk- 247 (602)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++||.|+.. .....|+.++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888999999999999999998642 146789999996
Q ss_pred -ccEEEec
Q 007473 248 -YRIIIST 254 (602)
Q Consensus 248 -~KIlik~ 254 (602)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 8877764
|
This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity. |
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-17 Score=147.22 Aligned_cols=103 Identities=24% Similarity=0.371 Sum_probs=84.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCC--CCcccccccCCCCCCCCeeccEEEEEeec---CCccEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP--ADKKMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALLR 542 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p--~d~~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~Lr 542 (602)
+|+|+|++|++|+.. + .+.+||||+|.+.|.. ....+++|+++.+++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 489999999999642 2 2668999999998732 22345689999999999999999999974 3447899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~ 577 (602)
|.|+|+|..+++++||++++|+.++..+- .|+||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998764 566774
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=137.73 Aligned_cols=113 Identities=21% Similarity=0.351 Sum_probs=92.7
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~~------~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITKG------DLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCcc------CCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 78999999999642 335678999999986532 3567999999999999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCccE---EEEccCCCCCccCCeEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGIH---AVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~GyR---~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.. ++++||++.+|++.+..|.+ +++|.+. ..+.|.++|.+
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998865 5666543 24678887765
|
A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o |
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=139.48 Aligned_cols=115 Identities=21% Similarity=0.308 Sum_probs=94.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-----CCccEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-----PEMALLRV 543 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-----pela~Lrf 543 (602)
++|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~~------d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLCK------GKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcCC------CCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 57999999999632 3446689999999853 56799999999999999999999876 34568999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc--Cc---cEEEEccCCCCCcc-CCeEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR--PG---IHAVPLFDRKGEEL-GSARLLMRFE 594 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~--~G---yR~ipL~d~~g~~l-~~asL~v~i~ 594 (602)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..++.. ..|.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 45 47899987666433 4578888763
|
Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member |
| >cd08677 C2A_Synaptotagmin-13 C2 domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-16 Score=139.59 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=83.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4579999999999851 134799999999642 22457799999999999999999999987666 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCc--cCccEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQL--RPGIHAV 574 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L--~~GyR~i 574 (602)
+|||+|.++++++||++.+|++.+ ..|.+|+
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 999999999999999999999975 6777764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain |
| >cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.4e-16 Score=159.13 Aligned_cols=144 Identities=25% Similarity=0.295 Sum_probs=124.5
Q ss_pred CCCCcccccccccCCcccccCCccC-------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 112 DMTAPLSHYFIYTGHNSYLIGNQFS-------SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 112 dM~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
+.+.||+++.|-.|||+|..+.... +...-..+...|.+|+|++|||||...+.++..|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5789999999999999998876642 233344567999999999999999875446789999988887899999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCHHH---HHHHHHHHHHHhhcccCCCCCCCCCCCCChhhcc-ccEEEecCC
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNPHL---QAKVAQMITQTFGAMLYSPESECLKEFPSPEELK-YRIIISTKP 256 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 256 (602)
|++.|+++.......+|||+||.+++... +..+++.|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999989999999999998875 89999999999999999875 3346789999999 999998654
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X |
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-15 Score=134.91 Aligned_cols=117 Identities=21% Similarity=0.305 Sum_probs=97.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~~------d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAAR------DRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCCc------CCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 389999999999642 3446789999999864 24679999999999999999999986553 679999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
++..+++++||++.+++..+..| ..+++|.+..+.. ..|+|.+.+++.
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~~ 120 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTLT 120 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEEC
Confidence 99888899999999999999855 4589999887643 468999998875
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein |
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-15 Score=136.78 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=82.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEe-ec--CCccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL-TI--PEMALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v-~~--pela~Lrf 543 (602)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~~------~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPLL------D-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCCC------C-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 4699999999999742 3 4668999999998766666788999999999999999999987 32 23468999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|||+|..+++++||++.+||+.+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999999755
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut |
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.1e-15 Score=133.98 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=93.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
++|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 46789999999954 5679999876 58999999999998654 35699999
Q ss_pred EecCCCCCCCccEEEEEeCC-CccCcc---EEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVF-QLRPGI---HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~-~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||+|..++|++||.+.+||. .+.+|. .|.+|...+|++. .+.|.+.++|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~-~g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDK-EGMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCC-ceEEEEEEeC
Confidence 99999998999999999995 677774 6889988777764 4677777654
|
Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian |
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-15 Score=140.98 Aligned_cols=112 Identities=15% Similarity=0.152 Sum_probs=91.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
..|+|+|+.|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.|...++ ..|+|.
T Consensus 15 ~~L~V~Vi~A~nL~~~------~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~~ 88 (136)
T cd08406 15 ERLTVVVVKARNLVWD------NGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRVT 88 (136)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEEE
Confidence 4699999999999642 34466899999999875555557799999999999999999999876554 679999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
|+|+|..+++++||++.++..+..+|++|+ .+.+.-++++
T Consensus 89 V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 89 VAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 999998888999999999998888888876 3555445543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl |
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.8e-15 Score=139.12 Aligned_cols=119 Identities=18% Similarity=0.271 Sum_probs=98.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
.|+|+|++|++|+.. +.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|+|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~~------d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVPS------DKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCCC------CCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 389999999999642 4456789999999975 5778998877 599999999999987665678999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc-------cEEEEccCCCC-----Cc-cCCeEEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG-------IHAVPLFDRKG-----EE-LGSARLLMRFEFYE 597 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G-------yR~ipL~d~~g-----~~-l~~asL~v~i~~~e 597 (602)
|++..+++++||++.+||+.+..| -+|+||.+..| ++ ...+.|.|+|.|..
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~~~ 133 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCLDG 133 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEecC
Confidence 999877899999999999998654 58899998765 22 35689999998864
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-15 Score=135.19 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=93.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-c--cEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE-M--ALLRVE 544 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe-l--a~Lrf~ 544 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ + ..|+|.
T Consensus 1 ~L~V~vi~A~~L~~~------d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMPK------DGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 489999999999642 3345689999999875 4679999999999999999999987543 2 579999
Q ss_pred EEecCCCC-CCCccEEEEEeCCCcc-Cc---cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 545 VRKYSMPE-KDEFAGQTCLPVFQLR-PG---IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 545 V~D~d~~~-~dd~lGq~~lpL~~L~-~G---yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|||.+... ++++||++.+|++.+. .| .+|.+|.......-..|.|.+++.+.
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 126 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYIT 126 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEEc
Confidence 99998775 7999999999999986 44 56788875432223467899888875
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.9e-15 Score=137.85 Aligned_cols=108 Identities=26% Similarity=0.269 Sum_probs=88.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-----------C
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-----------P 536 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-----------p 536 (602)
+|+|+|+.|++|+. ..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999963 2356899999999876555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEecCCCCCCCccEEEEEeCCCccCc----cEEEEccCCCCCc
Q 007473 537 --E--MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG----IHAVPLFDRKGEE 583 (602)
Q Consensus 537 --e--la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G----yR~ipL~d~~g~~ 583 (602)
+ ...|.|.|||++..++++|||++.||+..+..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 257999999999877899999999999999876 3578887655443
|
RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.8e-15 Score=133.84 Aligned_cols=114 Identities=19% Similarity=0.230 Sum_probs=90.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|.|+|++|++++.- ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 389999999994211 1124457789999999753 5779999999999999999999997654 489999999
Q ss_pred cCCCC------CCCccEEEEEeCCCccCccE---EEEccCCCCCcc-CCeEEE
Q 007473 548 YSMPE------KDEFAGQTCLPVFQLRPGIH---AVPLFDRKGEEL-GSARLL 590 (602)
Q Consensus 548 ~d~~~------~dd~lGq~~lpL~~L~~GyR---~ipL~d~~g~~l-~~asL~ 590 (602)
++... ++++||++.+||..+..|.+ ++||.+.++... ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98763 79999999999999998854 789987665443 445553
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.8e-15 Score=134.00 Aligned_cols=106 Identities=14% Similarity=0.232 Sum_probs=85.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|++|++|+... ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 356999999999996421 12356899999999754443457799999999999999999999876544 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC---ccEEEEc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP---GIHAVPL 576 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~---GyR~ipL 576 (602)
.|||+|..+++++||++.++|+++.. .-.|+||
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l 124 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPL 124 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEEC
Confidence 99999988889999999999999854 3567776
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2 |
| >cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.9e-15 Score=136.45 Aligned_cols=114 Identities=13% Similarity=0.163 Sum_probs=90.0
Q ss_pred CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCC-CCeeccEEEEEeecCCcc-EE
Q 007473 464 PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNW-TPVWDDEFTFPLTIPEMA-LL 541 (602)
Q Consensus 464 p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~-nPvWNEtf~F~v~~pela-~L 541 (602)
|..++|+|+|+.|++|+.. .....+||||+|.+.+.+.+..|+||++++++. ||+|||+|.|+|..++.. .|
T Consensus 11 p~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 3456799999999999742 123446999999999888887889999999995 799999999999876553 68
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCcc-CccEEE-EccCCCCCc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLR-PGIHAV-PLFDRKGEE 583 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~-~GyR~i-pL~d~~g~~ 583 (602)
.+.|||+|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 888999988888999999999998754 456665 344444444
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho |
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
Probab=99.58 E-value=3e-14 Score=130.28 Aligned_cols=118 Identities=18% Similarity=0.294 Sum_probs=95.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||+|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 3599999999999631 2479999999964 234678874 5799999999999977676667889999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCC-CccCCeEEEEEEEEEEc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKG-EELGSARLLMRFEFYEA 598 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g-~~l~~asL~v~i~~~e~ 598 (602)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|.++
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~~~ 125 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYSHE 125 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEEcc
Confidence 9998888999999999999998886 4778876543 23356899999999874
|
RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki |
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-14 Score=135.88 Aligned_cols=125 Identities=20% Similarity=0.288 Sum_probs=100.0
Q ss_pred ceeEEEEEEeccCcccCccC--------------c----------CCCCCCCCCceEEEEEecCCCCcccccccCCCCCC
Q 007473 466 KKTLKVKAYMGDGWYLDFKQ--------------M----------DCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNW 521 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~--------------~----------~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~ 521 (602)
.++|.|+|+.|++|+..... . .....+.+||||+|.+.+. ...||++++++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCC
Confidence 46799999999999853210 0 0013456899999999752 346999999999
Q ss_pred CCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccC-CeEEEEEEEEE
Q 007473 522 TPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELG-SARLLMRFEFY 596 (602)
Q Consensus 522 nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~-~asL~v~i~~~ 596 (602)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++.. ++.|.|+++|.
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999775 789999999999998775 68999999899875 58999999873
|
PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic |
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.4e-14 Score=127.72 Aligned_cols=117 Identities=21% Similarity=0.330 Sum_probs=96.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~ 68 (119)
T cd08377 1 GFLQVKVIRASGLAAA------DIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVY 68 (119)
T ss_pred CEEEEEEEeeeCCCCC------CCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEE
Confidence 3689999999999642 3345689999999864 356999999999999999999997532 357999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|++..+++++||++.+++..+..|. ++.+|.+..+..-..++|.+.++|
T Consensus 69 d~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~ 118 (119)
T cd08377 69 DEDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDV 118 (119)
T ss_pred ECCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEe
Confidence 9998778999999999999998774 577898877666667899988876
|
MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran |
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-14 Score=133.72 Aligned_cols=108 Identities=20% Similarity=0.196 Sum_probs=87.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+. ..-..|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999999631 12345689999999986554446889999999999999999999998 44568999999
Q ss_pred -ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCC
Q 007473 547 -KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRK 580 (602)
Q Consensus 547 -D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~ 580 (602)
|++...++++||++.++|+.+..+. .|.+|.+..
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 5777778999999999999996553 566777543
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=132.29 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=82.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..|.|+|+.|++|+.. +.. +.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 4699999999999742 222 46899999999865555567899999999999999999999875444 48999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|||+|..+++++||++.+||..+..+
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccC
Confidence 999999888899999999999998654
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety |
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=131.99 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=81.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCC-CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKF-WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~-~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..|.|+|+.|++|+.. +. .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 5699999999999642 22 256799999999866555567899999999999999999999876554 58999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
.|||.+..+++++||++.|||+.+.-
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCccc
Confidence 99999988889999999999998853
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids |
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-14 Score=130.59 Aligned_cols=121 Identities=20% Similarity=0.289 Sum_probs=94.6
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+... ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~~------d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAKK------DIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCcc------cCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 389999999999642 3446789999999986421 22356899999999999999999998643 45789999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc---------cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG---------IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G---------yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||++..+++++||++.++++.+..+ -++.+|....+..-..+.|.+.+.|
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~ 132 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAY 132 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEee
Confidence 9999888899999999999998643 2567887544333346889888876
|
Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.2e-15 Score=136.93 Aligned_cols=115 Identities=18% Similarity=0.220 Sum_probs=90.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..+|+|+|+.|++|+.. ..+....+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 35699999999999642 1112233799999999865444457799999999999999999999886655 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
+|+|+|..+++++||++.+++.+-.++.+|+ .+++.-++++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 9999999999999999999999866666665 4555445543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy |
| >cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=128.50 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=79.3
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEVR 546 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V~ 546 (602)
.|.|+|++|++|+.... .......+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 58999999999974211 111123479999999842 46789999999999999999999876554 47999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998876
|
PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM |
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-14 Score=128.98 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=86.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
+.|+|+|++|++|+.. +.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.
T Consensus 1 G~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~ 72 (111)
T cd04041 1 GVLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLS 72 (111)
T ss_pred CEEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEE
Confidence 3689999999999642 333 568999999986532 34579999999999999999999887653 35899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCccEEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~ 577 (602)
|.|||+|..+++++||++.+++..|.+--+|.|++
T Consensus 73 ~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 73 CRLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 99999998888999999999999998777788776
|
C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan |
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-14 Score=127.14 Aligned_cols=110 Identities=23% Similarity=0.303 Sum_probs=92.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 89999999999631 479999999854 477999999999999999999998766667899999999
Q ss_pred CCCCCCCccEEEEEeCCCccC--------ccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRP--------GIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~--------GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.. ++++||++.++++.+.. .-+|.+|.+..+.. ..+.|.+.|.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 876 68999999999999854 24899998877643 34788888876
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.7e-14 Score=125.47 Aligned_cols=111 Identities=18% Similarity=0.221 Sum_probs=90.9
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||++.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 3345689999999854 567999999999999999999998766567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
+..+++++||++.++|+.+..+- .+++|.+. .|.|++++.+.
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~~ 115 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTLT 115 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEec
Confidence 98888999999999999987653 35677654 36777777663
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei |
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.6e-14 Score=126.89 Aligned_cols=114 Identities=20% Similarity=0.245 Sum_probs=90.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+++|+++.+ +.||+|||+|.|.+..+....|.|.|
T Consensus 1 g~L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v 69 (118)
T cd08681 1 GTLVVVVLKARNLPNK------RKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAV 69 (118)
T ss_pred CEEEEEEEEccCCCCC------CcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 3699999999999642 3456789999999865 4678988765 68999999999999876667899999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||++..+ +++||++.++++.+..| -.+.+|.+. |+ ..+.|.++++|
T Consensus 70 ~d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~~-~~--~~G~i~l~l~f 118 (118)
T cd08681 70 FDDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTLK-GR--YAGEVYLELTF 118 (118)
T ss_pred EeCCCCC-CcceEEEEEecHHHhhcCCCCCcEEeccC-Cc--EeeEEEEEEEC
Confidence 9998766 89999999999987554 456788643 33 34788888764
|
Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr |
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.2e-14 Score=127.18 Aligned_cols=113 Identities=19% Similarity=0.322 Sum_probs=94.9
Q ss_pred EEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCC
Q 007473 473 AYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSM 550 (602)
Q Consensus 473 Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~ 550 (602)
|++|++|+. ..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888853 245689999999865 467999999999999999999998754 45689999999998
Q ss_pred CCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 551 PEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 551 ~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
.+++++||++.++++.+..+. .++||.+..+.++. +.|.+.++|.+.+
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~~~~ 119 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQPPD 119 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEeCCC
Confidence 888999999999999998664 47899998887765 7999999988754
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.7e-14 Score=126.53 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=83.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-CC--ccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-PE--MALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-pe--la~Lr 542 (602)
.+.|+|+|++|++|+.. +..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. .+ ...|+
T Consensus 15 ~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPPR------DDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 35699999999999642 33466899999999865555567899999999999999999998643 22 36899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc--CccEEEEc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR--PGIHAVPL 576 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~--~GyR~ipL 576 (602)
|.|||++..+++++||++.++|+... .+-.|.+|
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 23445555
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-14 Score=133.20 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=91.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~~------d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPKM------DVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------ccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 34699999999999642 34567899999999754433456799999999999999999999875443 46899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||+|..+++++||++.+++.+...|.+++ +|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999998888999999999999977777765 4566667765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s |
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=125.87 Aligned_cols=121 Identities=23% Similarity=0.312 Sum_probs=96.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|++|++|+. ..+.+||||++.+.+ ...++||++++++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999963 245689999999853 1246799999999999999999999853 345799999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCC-ccCCeEEEEEEEEEEcccc
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGE-ELGSARLLMRFEFYEADVL 601 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~-~l~~asL~v~i~~~e~~~~ 601 (602)
+..+++++||++.++++.+..+ -.++||....++ .-..|+|.+.+.|.+..=+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~~~~~~ 125 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFMEPAEL 125 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEeccccC
Confidence 9888899999999999998754 456788755442 2246899999999886543
|
The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a |
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-14 Score=128.01 Aligned_cols=97 Identities=16% Similarity=0.240 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|.|+|+.|++|+.. +..+.+||||+|.+.+.... ..++||++++++.||+|||+|+|.+...++ ..|+
T Consensus 13 ~~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~ 86 (124)
T cd08680 13 DSSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQ 86 (124)
T ss_pred CCEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEE
Confidence 34699999999999642 23356899999999865443 357899999999999999999999877665 4899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|+||+.+..+++++||++.++|+.+.
T Consensus 87 ~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 87 VDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 99999998888999999999999884
|
Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom |
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=127.86 Aligned_cols=113 Identities=19% Similarity=0.278 Sum_probs=90.3
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~~------d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKPC------NSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 6799999999999642 3456789999999843 4689999999999999999999998776788999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccC------c--cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRP------G--IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~------G--yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|+|..+++++||++.+++..+.. + +++++|.. ...+.+.+.|.+
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~-----~~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLHE-----VPTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEecccc-----ccceeEEEEEEe
Confidence 99988889999999999999864 1 24455532 233566666654
|
A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro |
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-14 Score=131.78 Aligned_cols=113 Identities=15% Similarity=0.176 Sum_probs=90.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.++|+|+|++|++|+.. +..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~~------d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKKM------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------cCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999642 34567899999999754444456789999999999999999999875554 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||++..+++++||++.+++.+...++.|+ +|....++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 9999998888999999999999987777554 6666655554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: |
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=123.17 Aligned_cols=111 Identities=22% Similarity=0.369 Sum_probs=91.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++++.. +..+.+||||+|.+.| ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57999999999642 2345679999999865 2347899999999999999999998765567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLM 591 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v 591 (602)
+..+++++||++.+++..+..| ..+++|....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6889998766654 456764
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-13 Score=124.61 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=90.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 1 ~L~v~vi~a~~L~~~------d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAPK------DRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCCC------CCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 389999999999632 3345689999999854 45789999999999999999999887666789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCc----cCCeEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEE----LGSARLLMRF 593 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~----l~~asL~v~i 593 (602)
++..+++++||++.+++..+..+ ..|..|.....++ -..++|.+.|
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 99888899999999999998654 3566776533221 1346666655
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a |
| >KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.6e-14 Score=133.06 Aligned_cols=92 Identities=23% Similarity=0.404 Sum_probs=80.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|+.|.+|.. .|..+.+||||.+.+.+ ++.||+++++|.||+|||+|+|.+..| ...|++.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 569999999999843 34446789999999875 688999999999999999999999887 457999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|+|.+++|||+|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
|
|
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=122.32 Aligned_cols=96 Identities=26% Similarity=0.340 Sum_probs=81.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 88999999999742 2345689999999975 577899999999999999999999988888999999998
Q ss_pred CCCCCCCccEEEEEeCCCccCc-----cEEEEccC
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFD 578 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d 578 (602)
+. +++||++.++|..+..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 36778764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=124.62 Aligned_cols=98 Identities=20% Similarity=0.283 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..+|+|+|++|++|+.. +..+.+||||+|.+.+. ...++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~~------d~~~~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPAM------DMGGTSDPYVKVYLLPD--KKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCCc------cCCCCCCCEEEEEEEcC--CCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 35699999999999642 33456899999999743 3356799999999999999999999876544 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.|||+|..+++++||++.+|++.+..|.
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCC
Confidence 9999998888999999999999986653
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and |
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-13 Score=124.88 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=78.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEe-ecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL-TIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v-~~pela~Lrf~ 544 (602)
.++|+|+|++|++|+. +..+.+||||+|.+.| .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 4689999999999953 2346689999999865 378999999999999999999974 34456789999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|||+|..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999988899999999999876544
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few |
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
Probab=99.49 E-value=1e-13 Score=125.63 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=80.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~~------~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRST------N-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCCC------C-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 4699999999999642 3 356899999999876555567799999999999999999999865443 4688999
Q ss_pred EecCCCC-CCCccEEEEEeCCCccCcc
Q 007473 546 RKYSMPE-KDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 546 ~D~d~~~-~dd~lGq~~lpL~~L~~Gy 571 (602)
||.+... ++++||.+.||+..+..|-
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~ 111 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQK 111 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence 9988764 4789999999999986553
|
This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho |
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.3e-14 Score=123.81 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=83.0
Q ss_pred EEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCee-ccEEEEEeecCCc--cEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pel--a~Lrf~ 544 (602)
|+|+|++|++|+.. + ..+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 68999999999642 2 235679999999854 5789999999999999 9999999977654 589999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccC---cc---EEEEccC
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRP---GI---HAVPLFD 578 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~---Gy---R~ipL~d 578 (602)
|||++..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 5778876
|
The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a |
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.1e-14 Score=128.53 Aligned_cols=113 Identities=12% Similarity=0.174 Sum_probs=88.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|++|++|+.. +..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~~------d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAAM------DANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCCc------CCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 45799999999999642 33466899999999865444456799999999999999999999876654 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l 584 (602)
.|||+|..+++++||++.+++.+..+.. .|..++..-++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 9999998888999999999998754433 3345655555554
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai |
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-13 Score=123.29 Aligned_cols=113 Identities=15% Similarity=0.319 Sum_probs=90.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999963 24456789999999864 356799999999999999999999854 56899999999
Q ss_pred CCCCC--CCccEEEEEeCCCccC----ccEEEEccCCCCCc--cCCeEEEEEE
Q 007473 549 SMPEK--DEFAGQTCLPVFQLRP----GIHAVPLFDRKGEE--LGSARLLMRF 593 (602)
Q Consensus 549 d~~~~--dd~lGq~~lpL~~L~~----GyR~ipL~d~~g~~--l~~asL~v~i 593 (602)
+..++ +++||++.++++.|.. +..|++|++..... ...++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87664 5799999999999742 37899997766532 2357777764
|
A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are |
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=129.71 Aligned_cols=107 Identities=18% Similarity=0.341 Sum_probs=83.2
Q ss_pred eEEEEEEeccCcccCccCc--------CCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-
Q 007473 468 TLKVKAYMGDGWYLDFKQM--------DCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM- 538 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~--------~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel- 538 (602)
+|.|+|+.|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|+.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999998531100 001224579999999876 35689999999999999999999877765
Q ss_pred cEEEEEEEecCCCCCCCccEEEEEeCCCccC-c---------cEEEEccCC
Q 007473 539 ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRP-G---------IHAVPLFDR 579 (602)
Q Consensus 539 a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~-G---------yR~ipL~d~ 579 (602)
..|.|+|||+|..+++++||++.+++..+.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998743 2 266666643
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-13 Score=123.61 Aligned_cols=99 Identities=22% Similarity=0.300 Sum_probs=81.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 35699999999999642 33567899999999765544567899999999999999999999865443 57999
Q ss_pred EEEecCCC--CCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMP--EKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~--~~dd~lGq~~lpL~~L~~G 570 (602)
.|||.+.. +++++||++.++|..|..+
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEEECCcccCCCCceEEEEEEeccccccc
Confidence 99998864 5799999999999998654
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1 |
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=4e-13 Score=122.26 Aligned_cols=117 Identities=13% Similarity=0.204 Sum_probs=94.0
Q ss_pred eEEEEEEeccCcccCccCcCCCC--CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKF--WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~--~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.|+|+|++|++|+.. +. .+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 589999999999642 23 46689999999743 567999999999999999999999875567899999
Q ss_pred EecCCCCCCCccEEEEEeCCCcc----Cc--cEEEEccCCCCC--ccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLR----PG--IHAVPLFDRKGE--ELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~----~G--yR~ipL~d~~g~--~l~~asL~v~i~~ 595 (602)
||++..+++++||++.+++..+. .| -.+++|.+.... ....++|.+++.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998878999999999999885 22 367888766322 3356889888865
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu |
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-13 Score=122.62 Aligned_cols=99 Identities=13% Similarity=0.191 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
.+.|+|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35699999999999642 2 2356899999998754433356899999999999999999999876543 5799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|.|||++..+++++||++.++|+.+..|
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEeccccccc
Confidence 9999999888899999999999999654
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into |
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-13 Score=120.28 Aligned_cols=117 Identities=18% Similarity=0.229 Sum_probs=89.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+...........+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999996421000000124689999999864 56899999999999999999999876556789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
++.. ++++||++.++++.+..+ -.|++|.+. ..+.|.++++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 799999999999988654 267888754 34667777664
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular |
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.1e-13 Score=120.98 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=90.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+. .....||++++++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~~------~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKAD------SSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCCC------CCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 589999999999642 33567899999986532 1245799999999999999999999877656789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccC---cc---EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRP---GI---HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~---Gy---R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
++..+++++||++.++|+.+.. |. ++++|.. .+.+.+++.+..
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-------~g~i~l~~~~~~ 122 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-------QGRLLLRVSMEG 122 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-------CCeEEEEEEEee
Confidence 9988789999999999987642 32 5677752 357777777754
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap |
| >cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.2e-14 Score=128.55 Aligned_cols=112 Identities=13% Similarity=0.207 Sum_probs=86.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 234567899999998542222345789999999999999999999866555 369999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc--cEEEEccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG--IHAVPLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G--yR~ipL~d~~g~~l 584 (602)
|||+|..+++++||++.|........ -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555442 23445666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta- |
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.1e-14 Score=128.12 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=89.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 234567899999998754333456789999999999999999999864433 46999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||++..+++++||++.+|+.....|++|+ .+....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 9999998888999999999999777787654 5666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind |
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.9e-13 Score=122.91 Aligned_cols=98 Identities=20% Similarity=0.282 Sum_probs=80.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|+|+|++|++|+.. +..+.+||||+|.+.. ....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~~------d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i 86 (124)
T cd08387 15 MGILNVKLIQARNLQPR------DFSGTADPYCKVRLLP--DRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEV 86 (124)
T ss_pred CCEEEEEEEEeeCCCCC------CCCCCCCCeEEEEEec--CCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEE
Confidence 35699999999999632 3346689999999953 33456799999999999999999999875543 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.|||++..+++++||++.++++.+..+-
T Consensus 87 ~V~d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 87 LLYDFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred EEEECCCCCCCceeEEEEEecccccCCC
Confidence 9999998888999999999999997553
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv |
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-13 Score=120.58 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=81.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC----ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE----MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe----la~Lr 542 (602)
..|+|+|+.|++|+ .+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+. -..|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 46999999999984 24479999999975 4678999999999999999999986543 25799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc------EEEEccCC
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI------HAVPLFDR 579 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy------R~ipL~d~ 579 (602)
|.|||++..+++++||++.++|+.+..+. +|++|.|+
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999998888999999999999996652 46777653
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-13 Score=127.63 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=88.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.++|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~v~vi~a~~L~~~------~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKAM------DINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------ccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 35699999999999632 34567899999998643333346799999999999999999999864433 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccE-EEEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIH-AVPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR-~ipL~d~~g~~l 584 (602)
.|||.+..+++++||++.+++.....+.+ |..|....++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 99999988889999999999998755443 446666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.9e-13 Score=123.94 Aligned_cols=96 Identities=21% Similarity=0.332 Sum_probs=79.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeecC----CccE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTIP----EMAL 540 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~p----ela~ 540 (602)
..|+|+|++|++|+.. +..+.+||||+|.+.+... +..++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 4699999999999642 3346689999999975432 24578999999999999999999998652 2468
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s |
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.4e-13 Score=122.96 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=76.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCC-CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEE-EeecCCc--cEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKF-WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTF-PLTIPEM--ALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~-~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F-~v~~pel--a~Lr 542 (602)
.+|+|+|++|++|+.. +. .+.+||||+|.+.+ .+..++||++++++.||+|||+|.| .+...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 4699999999999742 22 25679999999864 3345679999999999999999999 4443222 3699
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
|.|||+|..+++++||++.+||+.+..
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccCC
Confidence 999999988889999999999999853
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence |
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-12 Score=118.31 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=93.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|+|+|++|++|+. .+.++.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 23457789999998765 467999999999999999999987654 457999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccC-ccEEEEccCCCC--CccCCeEEEEEEEEEEc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRP-GIHAVPLFDRKG--EELGSARLLMRFEFYEA 598 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~-GyR~ipL~d~~g--~~l~~asL~v~i~~~e~ 598 (602)
|++... +++||.+.++++.+.. .+++++|..... .-...|+|.+++...++
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~i~~~~~~~~~ 124 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVPGTISVKVTSSDD 124 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCCCEEEEEEEEccc
Confidence 998765 8999999999987654 478899953221 12234788888877653
|
A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic |
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.7e-13 Score=121.62 Aligned_cols=117 Identities=22% Similarity=0.378 Sum_probs=91.4
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-C--------Cc
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-P--------EM 538 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-p--------el 538 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +-
T Consensus 2 ~l~v~V~~a~~L~~~------d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLAA------DKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcCC------CCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 489999999999642 4456789999999864 47799999999999999999997532 1 12
Q ss_pred cEEEEEEEecCCCCCCCccEEEEE-eCCCccC------ccEEEEccCCCCCccCCeEEEEEEEEEEc
Q 007473 539 ALLRVEVRKYSMPEKDEFAGQTCL-PVFQLRP------GIHAVPLFDRKGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 539 a~Lrf~V~D~d~~~~dd~lGq~~l-pL~~L~~------GyR~ipL~d~~g~~l~~asL~v~i~~~e~ 598 (602)
..|.|.|||+|..+++++||++.+ |+..++. --+|++|... |. ..|.|+|.|++.++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~~-~~--~~Geil~~~~~~~~ 134 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYKG-GQ--SAGELLAAFELIEV 134 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeecC-CC--chhheeEEeEEEEe
Confidence 469999999998888999999986 6555542 2378888733 32 45899999999875
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.6e-13 Score=120.70 Aligned_cols=114 Identities=22% Similarity=0.295 Sum_probs=90.6
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~~------d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIAK------DKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcCC------CCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 589999999999642 3456689999999843 467999999999999999999988655 3579999999
Q ss_pred cCCC-----------CCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEE
Q 007473 548 YSMP-----------EKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRF 593 (602)
Q Consensus 548 ~d~~-----------~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i 593 (602)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.+++
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 9852 46899999999999886554 5678876666655577888764
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev |
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=123.17 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=91.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC--------ccE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE--------MAL 540 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe--------la~ 540 (602)
..++|..+.+++++ ..+..+.+||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 34556666654332 122334579999999743234456889999999999999999999986442 135
Q ss_pred EEEEEEecCCC-CCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 541 LRVEVRKYSMP-EKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 541 Lrf~V~D~d~~-~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|.|||++.+ .+|++||++.++|+.+..+ -.+++|++ |....+|.|-|+|.+.+
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~r~ 138 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRLRE 138 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEecC
Confidence 99999999875 4699999999999999544 34678885 66667899999988754
|
Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha |
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-13 Score=120.24 Aligned_cols=115 Identities=14% Similarity=0.172 Sum_probs=89.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|+.|++|+.. +..+..||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPAK------DITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcCC------CCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 78999999999642 3456689999999864 2346999999999999999999998543 46899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc----cEEEEccCCCCCccCCeEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG----IHAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G----yR~ipL~d~~g~~l~~asL~v~i~ 594 (602)
+..+++++||++.+++..+..+ -.|++|....+..-..+.|.+.++
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999998877643 368898653322223467776654
|
Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. |
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=122.00 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=87.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCC----ccEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPE----MALLR 542 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pe----la~Lr 542 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 489999999999642 3346689999999975 24678998764 689999999999998775 47899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc--------EEEEccCCCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI--------HAVPLFDRKGEEL 584 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy--------R~ipL~d~~g~~l 584 (602)
|.|||++..+++++||++.+|+..+..+. .+.+|.+..|++-
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~ 120 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQ 120 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcC
Confidence 99999988777999999999999987654 3578888888764
|
SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such |
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=118.72 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=88.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|+.|.+|+.. . +..+.+||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~----~-~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR----S-GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC----C-CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999642 1 1134679999999843 2357899999999999999999998643 36899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~ 594 (602)
+..+++++||.+.++++.+..| -.|++|.-.....-..|.|.+.+.
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELR 120 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEE
Confidence 9888899999999999999644 357777632211113577776654
|
RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p |
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=122.45 Aligned_cols=121 Identities=20% Similarity=0.334 Sum_probs=99.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
...|.|.|+.|++||.. .++||+|.+.| ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~~-----------~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPPK-----------KRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCCc-----------CCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 35699999999999741 27899999987 2335999999999999999999975443 45689999
Q ss_pred EecCC-CC---CCCccEEEEEeCCCccCc---cEEEEccCCCCCc--------cCCeEEEEEEEEEEccccC
Q 007473 546 RKYSM-PE---KDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEE--------LGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 546 ~D~d~-~~---~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~--------l~~asL~v~i~~~e~~~~~ 602 (602)
+..+. .+ ++++||.+.||+..+..| -+|.||.+.+|.+ -.+++|.|++.|..+.|+|
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~~~~~lP 145 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQSTRVLP 145 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEEEeeeCC
Confidence 75442 21 478999999999999887 4799999999886 5678999999999999998
|
SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas |
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=119.83 Aligned_cols=118 Identities=19% Similarity=0.157 Sum_probs=90.6
Q ss_pred eeEEEEEEeccCcccCccCcC--C--CCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMD--C--KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~--~--d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lr 542 (602)
+.|+|+|+.|++|+....... . ...+..||||+|.+.+ ....+|++++++.||+|||+|+|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 569999999999963210000 0 0124579999999864 23468999889999999999999986 457899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC-----ccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP-----GIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~-----GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|+|++..+.+++||++.++|+.+.. +-.|++|. +.+.|.|++.+.-
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~~~ 130 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIELKG 130 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEEec
Confidence 999999887789999999999998876 25778885 3468888888763
|
A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.2e-13 Score=125.79 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=80.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC-Cc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP-EM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p-el--a~Lr 542 (602)
.+.|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 46799999999999742 334668999999997544445678999999999999999999985432 23 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|||++..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin |
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.5e-13 Score=120.03 Aligned_cols=101 Identities=19% Similarity=0.209 Sum_probs=80.3
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCC--ccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPE--MALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pe--la~Lrf 543 (602)
..|+|+|+.|++|+.. +..+..||||++.+.+. ...++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp~--~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLPS--KKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCch------hcCCCCCcEEEEEEccC--CcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 5699999999999642 23455799999887653 346789999887 999999999998 55433 357999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPL 576 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL 576 (602)
.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997653 34454
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd04048 C2A_Copine C2 domain first repeat in Copine | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.5e-13 Score=119.34 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=82.1
Q ss_pred EEeccCcccCccCcCCCCCCCCCceEEEEEecCC--CCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCC
Q 007473 473 AYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP--ADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSM 550 (602)
Q Consensus 473 Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p--~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~ 550 (602)
.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888863 2345678999999998754 23346799999999999999999999777777789999999997
Q ss_pred ----CCCCCccEEEEEeCCCccCc---cEEEEccCCCC
Q 007473 551 ----PEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKG 581 (602)
Q Consensus 551 ----~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g 581 (602)
.+++++||++.++++.|..+ ..+++|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 67899999999999999754 24567744443
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma |
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.1e-13 Score=123.02 Aligned_cols=97 Identities=21% Similarity=0.254 Sum_probs=79.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
.+|+|+|+.|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 15 ~~L~V~V~~a~nL~~~------~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~~ 87 (137)
T cd08409 15 NRLTVVVLRARGLRQL------D-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSLS 87 (137)
T ss_pred CeEEEEEEEecCCCcc------c-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEEE
Confidence 5699999999999642 3 456899999999864433346799999999999999999999865444 589999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
||+.+...++++||++.++......|
T Consensus 88 V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 88 VMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEeCCCCCCcceEEEEEECCcccCCC
Confidence 99999888899999999997655443
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id |
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.3e-12 Score=119.80 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=88.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-ccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE-MALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe-la~Lrf~V 545 (602)
..|+|+|++|++|+.. +..+..||||+|.+.+.+.+..+++|+++.++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 4699999999999642 2235689999999987666667889999999999999999999987654 35799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc--cEEEEccCCC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG--IHAVPLFDRK 580 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G--yR~ipL~d~~ 580 (602)
||++..+++++||++.++++.+..+ -.|.+|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9999877899999999999988643 4577887644
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd |
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-12 Score=116.78 Aligned_cols=119 Identities=18% Similarity=0.246 Sum_probs=92.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. . ...+.+||||+|.+.+. ....+|+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~--~---~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS--D---IIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc--c---ccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 4699999999999631 0 11245799999999752 35679999999999999999999987 44568999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCccEE---EEccCCCCCccCCeEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGIHA---VPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~GyR~---ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|++..+++++||++.+++..+..+..+ ..+....|++ .++|.|.++|.
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 999887899999999999998765332 2333455554 47888888875
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-12 Score=118.12 Aligned_cols=97 Identities=20% Similarity=0.277 Sum_probs=78.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC---CccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP---EMALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p---ela~Lr 542 (602)
...|+|+|++|++|+.. +..+..||||+|.+.+ .+..+.+|++++++.||+|||+|.|.+... ....|+
T Consensus 15 ~~~L~v~v~~a~~L~~~------d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 35699999999999642 3345689999999853 234567999999999999999999975321 235799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|.|||+|..+++++||++.++++.+..|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~ 114 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLT 114 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCC
Confidence 9999999888899999999999998765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-13 Score=114.73 Aligned_cols=75 Identities=31% Similarity=0.516 Sum_probs=64.7
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCCCCC
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPL 105 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n~~~ 105 (602)
||..||.+|++++..||+++|++||+++|++..++.++|.+||.+|++... ...+..||++||++||+|+ .|.++
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~---~~~~~~lt~~gF~~fL~S~-~N~~~ 75 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDER---NRQKGQLTLEGFTRFLFSD-ENSIF 75 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHH---HHCTTEEEHHHHHHHHHST-TCBSS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchh---hcccCCcCHHHHHHHHCCC-cCCCC
Confidence 799999999998899999999999999999988899999999999985431 1245789999999999996 57766
|
It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.9e-13 Score=122.55 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=90.2
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC--ccEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE--MALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe--la~Lrf~ 544 (602)
++|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 5699999999999642 2346689999999987544445679999999999999999999987654 3689999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccE-EEEccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIH-AVPLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR-~ipL~d~~g~~l 584 (602)
|||.+..+++++||++.++++....+.. |.+|.+..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999987789999999999999444443 457887767764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin |
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=117.70 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=82.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|+|+|++|++|+.. + ..+.+||||+|.+.+ .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 35699999999999642 2 345689999999863 23346789999999999999999999876544 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPL 576 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL 576 (602)
|.|||.+..+++++||++.++|+.+.... .|+||
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 99999998778999999999999987654 45565
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat |
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=121.22 Aligned_cols=113 Identities=14% Similarity=0.191 Sum_probs=86.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
..+|.|+|+.|.+|+.. +..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~~------~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKNL------AMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCcc------ccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 35699999999999642 34456899999999753222 246799999999999999999999876554 5899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC-ccE-EEEccCCCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP-GIH-AVPLFDRKGEEL 584 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~-GyR-~ipL~d~~g~~l 584 (602)
|.|||.+..+++++||++.+++..... +.. |..+....++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 999999988889999999999987654 333 334555555543
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-12 Score=117.56 Aligned_cols=99 Identities=17% Similarity=0.246 Sum_probs=80.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lr 542 (602)
..+|+|+|++|++|+.. +..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|. +...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKAM------DANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCCC------CCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 35699999999999642 33466899999999765555567899999999999999999996 333333 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
|.|||++.. ++++||++.++++.|.++-
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 999999877 7899999999999998763
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=117.38 Aligned_cols=91 Identities=15% Similarity=0.249 Sum_probs=77.6
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|.|++|++|+.. +..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++...|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~~------d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQPK------DPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCCC------CCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 34567899999998653 2346788888999999999999998878778999999999
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
|..+++++||++.++++...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
Probab=99.37 E-value=6e-12 Score=116.83 Aligned_cols=116 Identities=20% Similarity=0.289 Sum_probs=85.3
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--------CcccccccCCCCCCCCee-ccEEEEEeecCCcc
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--------DKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMA 539 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--------d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pela 539 (602)
++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+... .
T Consensus 3 ~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~--~ 73 (137)
T cd08691 3 FSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT--D 73 (137)
T ss_pred EEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--C
Confidence 6899999999952 3457899999999975332 134789999999999999 99999998543 3
Q ss_pred EEEEEEEecCCCCC---CCccEEEEEeCCCccCc------cEEEEccCCCCCccCCeEEEEEE
Q 007473 540 LLRVEVRKYSMPEK---DEFAGQTCLPVFQLRPG------IHAVPLFDRKGEELGSARLLMRF 593 (602)
Q Consensus 540 ~Lrf~V~D~d~~~~---dd~lGq~~lpL~~L~~G------yR~ipL~d~~g~~l~~asL~v~i 593 (602)
.|.|.|||++..++ +++||++.+|++.|..| ..+.+|.-......-.+.|.+++
T Consensus 74 ~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 74 VLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred EEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 79999999875433 69999999999999755 23456653333333335555554
|
NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C |
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.7e-12 Score=120.32 Aligned_cols=91 Identities=25% Similarity=0.392 Sum_probs=78.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|.+|+.. +. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~~------d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAVR------DF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCCC------CC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 4699999999999642 23 5689999999853 578999999999999999999999776 567999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|++..+++++||++.+++..+..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999887654
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i |
| >cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.1e-12 Score=113.65 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=72.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|.+|++|. +.+||||++.+.+......+.||++++++.||+|||+|+|.+.. -..|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 23799999988754332457899999999999999999999863 44899999997
Q ss_pred -------CCCCCCCccEEEEEeCC--Ccc-CccEE
Q 007473 549 -------SMPEKDEFAGQTCLPVF--QLR-PGIHA 573 (602)
Q Consensus 549 -------d~~~~dd~lGq~~lpL~--~L~-~GyR~ 573 (602)
|..+.|+++|.+.+.|+ .+. .|++-
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 45577999988877765 343 36644
|
The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr |
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.8e-12 Score=116.10 Aligned_cols=104 Identities=29% Similarity=0.318 Sum_probs=84.8
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC------------
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP------------ 536 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p------------ 536 (602)
|+|+|+.|++|+.. ..+..||||+|.+.+. ....+++|+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~~-~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNYS-SKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEecC-CcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999999631 2356899999998753 444678999999999999999999998764
Q ss_pred ---CccEEEEEEEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCC
Q 007473 537 ---EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRK 580 (602)
Q Consensus 537 ---ela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~ 580 (602)
.-..|.|.|||.+..++++|||++.+++..+..+ ..|++|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3357999999999887899999999999998654 5778887654
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin |
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=141.35 Aligned_cols=105 Identities=18% Similarity=0.371 Sum_probs=90.9
Q ss_pred CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 492 SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 492 s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. ..|.|.|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4579999999953 23559999999999999999999998764 58999999999887 699999999999999995
Q ss_pred ---EEEEccCCCCCcc-CCeEEEEEEEEEEccccC
Q 007473 572 ---HAVPLFDRKGEEL-GSARLLMRFEFYEADVLP 602 (602)
Q Consensus 572 ---R~ipL~d~~g~~l-~~asL~v~i~~~e~~~~~ 602 (602)
+|++|.+..|++. .++.|.|.++|.++.-.|
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~pv~~~~ 183 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIH 183 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEEEccccc
Confidence 7899999999998 458999999999876543
|
|
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=112.79 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=75.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|+.|++++. + + ..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.+.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~--~---~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P--D---KFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C--C---CCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 369999999999842 1 1 248999999954 57789988774 999999999999765544 999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc-----cEEEEcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLF 577 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~ 577 (602)
|+|.. +||++|++.+||+.+..+ -.|++|.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99965 699999999999998643 3567774
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-11 Score=112.31 Aligned_cols=91 Identities=19% Similarity=0.290 Sum_probs=75.8
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCC---ccEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999963 13346789999999854 4568888775 799999999999998773 467999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
.|||.+..+++++||++.+++..+..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988889999999999999854
|
In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.3e-12 Score=133.87 Aligned_cols=96 Identities=20% Similarity=0.349 Sum_probs=84.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|+|+|..|.+|-. .|.++.+||||++.+...+....|+||++++.++||+|||+|+|++...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 358888999988843 356788999999999998888899999999999999999999999976554 5799999
Q ss_pred EecCCCCCCCccEEEEEeCCCcc
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
||+|..+++||+|...+.++.|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998885
|
|
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=111.40 Aligned_cols=92 Identities=23% Similarity=0.267 Sum_probs=77.5
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++++.. +..+.+||||+|.+.+ ..+.+|+++.++.||+|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKNL------EGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCCc------cCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 589999999998642 3456789999999854 24578999999999999999999886653 589999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
++..+++++||++.+++..+..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999988765
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.8e-11 Score=114.35 Aligned_cols=94 Identities=23% Similarity=0.356 Sum_probs=76.1
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC------------------------cccccccCCCCC
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD------------------------KKMKSTKKKVDN 520 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d------------------------~~k~kTkvi~nn 520 (602)
....|+|+|++|++|+. .+..+.+||||+|.+.+.... ...++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 35679999999999853 244567899999998532110 123689999999
Q ss_pred CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 521 WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 521 ~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
.||+|||+|.|.+..+....|.|.|||++ +++||++.++++.+.
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 99999999999997655678999999987 789999999999987
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy |
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.4e-11 Score=106.00 Aligned_cols=113 Identities=18% Similarity=0.285 Sum_probs=84.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVR 546 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~V~ 546 (602)
|+|+|+.|.+|+.. +.+||||+|.+.+ ...++|+++++ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 78999999999631 4579999999865 23468999988 999999999999876554 35778888
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.+...++.++|.+.+....+..+. .|++|....+.....++|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8776555677777665555554443 578998766655556788888764
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 |
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-11 Score=101.70 Aligned_cols=85 Identities=31% Similarity=0.436 Sum_probs=73.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||+|.+.+... ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999642 2345679999999998544 568999999999999999999999888888899999999
Q ss_pred CCCCCCCccEEEE
Q 007473 549 SMPEKDEFAGQTC 561 (602)
Q Consensus 549 d~~~~dd~lGq~~ 561 (602)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999874
|
C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A .... |
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.7e-11 Score=107.31 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=80.6
Q ss_pred CCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 489 KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 489 d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
..++.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 3456689999999964 2356899988899999999999998766556799999999988 7999999999999873
Q ss_pred -C---ccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 569 -P---GIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 569 -~---GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
. +.+|.+|.+ ...++|.+++.|..
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~~p 110 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALWKP 110 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEEec
Confidence 2 357888865 24588999988875
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.6e-11 Score=108.47 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=84.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|.|+|++|+.+.. +..+.+||||+|.+.+. .+.+|++++++.||+|||+|.|.+. +...|.|.|||
T Consensus 3 ~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~d 69 (125)
T cd04021 3 QLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVWS 69 (125)
T ss_pred eEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEEe
Confidence 58999999983321 22456899999998652 3679999999999999999999974 34689999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc-------c-EEEEccCCCC-CccCCeEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG-------I-HAVPLFDRKG-EELGSARLLMRF 593 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G-------y-R~ipL~d~~g-~~l~~asL~v~i 593 (602)
++..+.+++||++.++|+.+..+ + -+++|....- .-...+.|.+.+
T Consensus 70 ~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 70 HHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred CCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 99888899999999999988642 2 2567764331 222345665544
|
E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e |
| >cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Probab=99.24 E-value=4e-11 Score=116.18 Aligned_cols=98 Identities=28% Similarity=0.394 Sum_probs=84.5
Q ss_pred cCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc------ccchHHHHHHHHhhcccccC
Q 007473 124 TGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT------TPVELIKCLRAIKENAFSAS 197 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 197 (602)
.+|+-|-...+ +.+..+|..||..|||.||+|||...| +.|||+|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888866554 889999999999999999999999876 579999999986 56889999999999999 88
Q ss_pred CCceEEEecCCCCH----HHHHHHHHHHHHHhh
Q 007473 198 PYPVILTFEDHLNP----HLQAKVAQMITQTFG 226 (602)
Q Consensus 198 ~yPvILSlE~Hcs~----~qQ~~ma~~l~~~~G 226 (602)
.+|++|.||.+++. .++.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999974 666777877776654
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph |
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.7e-11 Score=104.30 Aligned_cols=92 Identities=17% Similarity=0.264 Sum_probs=71.9
Q ss_pred EEEeccCcccCccCcCCCCCCCCCceEEEEEecCC-CCcccccccCCCCCCCCeeccEEEEEee---cCC-ccEEEEEEE
Q 007473 472 KAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP-ADKKMKSTKKKVDNWTPVWDDEFTFPLT---IPE-MALLRVEVR 546 (602)
Q Consensus 472 ~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p-~d~~k~kTkvi~nn~nPvWNEtf~F~v~---~pe-la~Lrf~V~ 546 (602)
-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 4568888863 2445678999999987632 12345799999999999999 6777643 222 368999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|++..+++++||++.++++.|..+
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcC
Confidence 999988899999999999999854
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-10 Score=124.72 Aligned_cols=123 Identities=16% Similarity=0.229 Sum_probs=95.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
..|+|+|+.|.+|+.. +..+.+||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999753 2234589999999985 33678899999999999999999999876655 579999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCcc-CCeEEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEEL-GSARLLMRFEFYE 597 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l-~~asL~v~i~~~e 597 (602)
|||+|.++++++||++.+||..+.... .|.+|....-..- ..+.|++..+|..
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y~p 295 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCYLP 295 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEeec
Confidence 999999999999999999999887655 4666654321111 1157777666654
|
|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.7e-10 Score=94.90 Aligned_cols=99 Identities=29% Similarity=0.430 Sum_probs=81.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999998532 122457999999998632 3467899998889999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCccEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGIHAVP 575 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~GyR~ip 575 (602)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 877678999999999999999987654
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. |
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.6e-10 Score=122.79 Aligned_cols=117 Identities=19% Similarity=0.275 Sum_probs=89.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
.+++++|++||||.. .|..+.+||||.+++. +.++||++|..++||+|||.|+|.+.+. -..|+++||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 468999999999953 2455778999999986 3788999999999999999999999865 346999999
Q ss_pred ecCCC-----------CCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMP-----------EKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~-----------~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|+|.. ..|||+||..|-+..|.... -|..|-....+....+.+.+||.+
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhisv 423 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHISV 423 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEEE
Confidence 98853 35899999999998886553 244554444444444555555544
|
|
| >cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-09 Score=99.14 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=78.9
Q ss_pred EEEEEEeccCcccCccCcCCCCCC--CCCceEEEEEecCCCCcccccccCCCCCCC--CeeccEEEEEeec---------
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWS--PPQFYTRVGIAGVPADKKMKSTKKKVDNWT--PVWDDEFTFPLTI--------- 535 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s--~~DpyV~V~i~G~p~d~~k~kTkvi~nn~n--PvWNEtf~F~v~~--------- 535 (602)
|+|.|..+++++... .+..+ .+||||++.+.|. ...+++|.++.++.| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 789999999976431 11123 3899999999875 346789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 536 ------------PEM--ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 536 ------------pel--a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.++ ..|.++|||.|..++|++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999998765
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-09 Score=133.91 Aligned_cols=115 Identities=14% Similarity=0.236 Sum_probs=92.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~ 544 (602)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 478999999999984 2245689999999873 236799999999999999999999987764 459999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCcc---EEEEccC---CCCCccCCeEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFD---RKGEELGSARLLMRFEFY 596 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d---~~g~~l~~asL~v~i~~~ 596 (602)
|||+|.++ ++.+|.+.+++..+..+- -+++|.+ +.|++ -+|-++|+|.
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w~ 2100 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQWS 2100 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEec
Confidence 99999885 569999999999987553 3678875 33432 4688998885
|
|
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.1e-09 Score=117.63 Aligned_cols=131 Identities=15% Similarity=0.234 Sum_probs=104.5
Q ss_pred ceeEEEEEEeccCcccCc-----c-------CcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDF-----K-------QMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFP 532 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~-----~-------~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~ 532 (602)
.++|.|+|+.|.+||... . .+-......+||||.|.+.+ ....||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 467999999999887410 0 00001123579999999986 245699999886 699999999988
Q ss_pred eecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCcc-CCeEEEEEEEEEEccccC
Q 007473 533 LTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEEL-GSARLLMRFEFYEADVLP 602 (602)
Q Consensus 533 v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l-~~asL~v~i~~~e~~~~~ 602 (602)
+..+ .+-|.|+|+|.|.++ ..+||.+.+|+..|..|- +|+|+.+.+|+|+ ++++|.|+++|.++...|
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~~~~~~~ 154 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYFEVTKDR 154 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEEEcccCc
Confidence 8766 477999999999877 679999999999999884 7899999999998 558999999999876543
|
|
| >cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.5e-09 Score=108.31 Aligned_cols=138 Identities=18% Similarity=0.242 Sum_probs=108.8
Q ss_pred CCCcccccccccCCcccccCCc--cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 113 MTAPLSHYFIYTGHNSYLIGNQ--FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 113 M~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
-+.||++.-|-.|||++-...- -.+++....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|+
T Consensus 6 d~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~ 83 (279)
T cd08586 6 DDTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECY 83 (279)
T ss_pred CCCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHH
Confidence 3789999999999998754332 34556666788899999999999999864 24688999976555 89999999999
Q ss_pred hcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhccccEEEecC
Q 007473 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE---CLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 191 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 255 (602)
++.-..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 84 ~FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 84 SFLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 98877777889999999998864 3444666666666665432 24789999999999999865
|
This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which |
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=85.15 Aligned_cols=90 Identities=29% Similarity=0.462 Sum_probs=74.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46899999988642 1234579999999876 3567899988889999999999998764456799999998
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
+....+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87766899999999999887
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-09 Score=112.38 Aligned_cols=183 Identities=15% Similarity=0.158 Sum_probs=118.7
Q ss_pred cCCCCCCCCCcccccccceE-eecc-ccCCCcceeee-cccccccccceeeecCCccCCCCCCC----CcCC-----CC-
Q 007473 394 TRVNSSNYKPMIGWIHGAQM-VALN-MQGYGKSLWLM-HGMFRANAGCGYVKKPNFLLKEGPDD----QVFD-----PK- 460 (602)
Q Consensus 394 ~RidSSN~~P~~~W~~G~Qm-VALN-~QT~D~~m~lN-~~~F~~NG~cGYVLKP~~lr~~~~~~----~~f~-----p~- 460 (602)
||+.--..||. |+-.-.. |+.+ .|+.-+-+.+. ..+|..|+--|.|.=|....+..... .... ..
T Consensus 206 T~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~ 283 (421)
T KOG1028|consen 206 TRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEEL 283 (421)
T ss_pred eeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccc
Confidence 44545555563 4433333 2333 44444555544 46798888889988773222211100 0000 00
Q ss_pred C-C-------CCcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE
Q 007473 461 E-K-------LPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP 532 (602)
Q Consensus 461 ~-~-------~p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~ 532 (602)
. + +|....|+|.|+.|++|+. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.
T Consensus 284 ~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~ 357 (421)
T KOG1028|consen 284 AGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD 357 (421)
T ss_pred cceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe
Confidence 0 1 2445789999999999963 245567899999999865544567899999999999999999998
Q ss_pred eecCCc--cEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 533 LTIPEM--ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 533 v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
|....+ +.|.++|||+|..+++++||++.+...+-..|-+|+ .+.+.-++++
T Consensus 358 vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~~~~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 358 VPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDSTGEEVRHWQEMLNSPRKPV 412 (421)
T ss_pred CCHHHhheeEEEEEEEEcccccccceeeEEEecCCCCchHHHHHHHHHhCccCce
Confidence 875544 569999999999999999999888877633344443 3444334443
|
|
| >cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.5e-09 Score=105.97 Aligned_cols=138 Identities=21% Similarity=0.265 Sum_probs=104.6
Q ss_pred CCCCcccccccccCCcccccCCcc--CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-cchHHHHHHH
Q 007473 112 DMTAPLSHYFIYTGHNSYLIGNQF--SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT-PVELIKCLRA 188 (602)
Q Consensus 112 dM~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts-~i~f~dvi~a 188 (602)
--++||++|.+-.+||+|..+..- .+...-......|.+|.|-++||++..+ +...++||..... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999887653 3333334567889999999999998753 4578999875544 7899999999
Q ss_pred HhhcccccCCCc-eEEEecCCCCHHHHHHHHHHHH-HHhhcccCCCCCCC--CCCCCChhhcc--ccEEEe
Q 007473 189 IKENAFSASPYP-VILTFEDHLNPHLQAKVAQMIT-QTFGAMLYSPESEC--LKEFPSPEELK--YRIIIS 253 (602)
Q Consensus 189 I~~~AF~~S~yP-vILSlE~Hcs~~qQ~~ma~~l~-~~~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIlik 253 (602)
|+++.= +.|.- |||.||++.+...+ ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||-
T Consensus 85 i~~fL~-~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 85 VVDFLD-ANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHH-hCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 999864 34444 88999999987764 3344443 68999999886433 46899999998 554443
|
This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). |
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1e-07 Score=110.90 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=88.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|.+++|++|+. .+.++-+||||++.+.+ +.-++|++++.++||+|||.+..+|.+.....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 568899999999963 45667789999999986 23689999999999999999999998877778999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCC
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRK 580 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~ 580 (602)
|+|...+++.||++.++|..|.+|. ..|||-.+.
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 9999999999999999999999874 346765443
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.8e-08 Score=106.04 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=77.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeec----CCccE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTI----PEMAL 540 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~----pela~ 540 (602)
++|.|+|+-|.++.. .|.++.+||||.|++.+... -...+||++++.++||+|+|+|+|.|.. .+-|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 468888888887632 36678899999999874211 1235799999999999999999999863 24589
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|+|.|+|..+.+||-|++.+-|+.+.
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~vp 1048 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDVP 1048 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCCC
Confidence 9999999999999999999998887763
|
|
| >PLN02352 phospholipase D epsilon | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.4e-06 Score=99.84 Aligned_cols=124 Identities=19% Similarity=0.323 Sum_probs=93.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.++|.++|..|.-+...+.. ........||||+|.+.+. ...|| .|.-||+|||+|...+..+-.+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 56799999998732111110 0001122399999999862 34567 4456999999999888776446799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCcc----EEEEccCCCCCccCCeEEEEEEEEEEccccC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGI----HAVPLFDRKGEELGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~Gy----R~ipL~d~~g~~l~~asL~v~i~~~e~~~~~ 602 (602)
+| ...+||.+.+|+..|..|- +|+|+.+.+|+|+.+++|.|+++|.+++..|
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 136 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFRPAELEP 136 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEEEhhhCc
Confidence 98 2679999999999998883 6899999999999889999999999987654
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.7e-06 Score=96.27 Aligned_cols=109 Identities=28% Similarity=0.360 Sum_probs=84.7
Q ss_pred CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC---------------CccEEEEEEEe-cCCCCCCC
Q 007473 492 SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP---------------EMALLRVEVRK-YSMPEKDE 555 (602)
Q Consensus 492 s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 555 (602)
+..|||++|...|.-.. ..++|++++.+.+|.|||.|.|.+..+ ++.-|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~-~~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKL-KEKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchh-hccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 44799999999874332 237899999999999999999998766 56679999999 55566699
Q ss_pred ccEEEEEeCCCccC-----ccEEEEccCCCCCc----cCCeEEEEEEEEEEccccC
Q 007473 556 FAGQTCLPVFQLRP-----GIHAVPLFDRKGEE----LGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 556 ~lGq~~lpL~~L~~-----GyR~ipL~d~~g~~----l~~asL~v~i~~~e~~~~~ 602 (602)
|+|+..+|+..+++ |+-.+.-++ +|+. -..++|.+++.+.++.|||
T Consensus 228 FlGevrv~v~~~~~~s~p~~W~~Lqp~~-~g~~~~~~~~lGslrl~v~y~~D~Vlp 282 (800)
T KOG2059|consen 228 FLGEVRVPVDVLRQKSSPAAWYYLQPRP-NGEKSSDGGDLGSLRLNVTYTEDHVLP 282 (800)
T ss_pred hceeEEeehhhhhhccCccceEEEecCC-CcccCCCCCCccceeeeEEeeeceecc
Confidence 99999999999873 333444443 3332 2448999999999999998
|
|
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.5e-05 Score=93.38 Aligned_cols=93 Identities=20% Similarity=0.304 Sum_probs=73.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|.|+|.+|.++.. ...-..+.+||||.+...+ ....||++++|.+||+|||+|-..+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 579999999999843 2212456789999999764 3455999999999999999988776521 125899999
Q ss_pred ecCCCCCCCccEEEEEeCCCcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.+....|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9887888999999999998875
|
|
| >cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae | Back alignment and domain information |
|---|
Probab=97.90 E-value=3e-05 Score=68.26 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=62.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++ +-||.|||+|+|.|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~---srnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKP---SRNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccC---CCCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889999888432 1111345689999999875 34778887 479999999999994 245699999997
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
... ..-.+|..-++++.|.
T Consensus 69 ~~~-~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GGD-QPVPVGLLWLRLSDIA 87 (109)
T ss_pred CCC-eecceeeehhhHHHHH
Confidence 532 2446777777766654
|
This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=6e-05 Score=82.20 Aligned_cols=121 Identities=16% Similarity=0.253 Sum_probs=91.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeec-cEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWD-DEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWN-Etf~F~v~~pel--a~Lrf 543 (602)
++|.|+|..|+.||...+.. ...|.||+|.+.. ..+||.+...++||.|| +-|.|.|...++ .-|.+
T Consensus 3 gkl~vki~a~r~lpvmdkas-----d~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDKAS-----DLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccccccc-----ccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 46899999999998653221 2368899999874 57899999999999998 569999987776 36999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc----------Cc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR----------PG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~----------~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
++.|+|..+.+|-||.+.|.++-|. .| --|+|.+|.--..-..-.+.|++++..
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlfn 139 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLFN 139 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeehh
Confidence 9999999888999999999988663 23 247888874322222346677776543
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.4e-05 Score=83.20 Aligned_cols=119 Identities=19% Similarity=0.246 Sum_probs=90.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|..|++||.. +..+..|||+.|.+.. ....||.+|..++-|.|.|.|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~~------~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPSY------GPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCCC------CCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 4589999999999742 3345689999999864 356789999999999999999998853 3556999999
Q ss_pred ecCCCCCCCccEEEEEeCCCcc--CccE-EEEc--cCCCCCccCCeEEEEEEEEEEcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLR--PGIH-AVPL--FDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~--~GyR-~ipL--~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
|.| .++|+.||.++|.-..|. +|.- |+.| -|++-+. .+.+-+.+++.|+.
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEV--QG~v~l~l~~~e~~ 128 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEV--QGKVHLELALTEAI 128 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhh--ceeEEEEEEecccc
Confidence 999 788999999999877664 4543 3445 3555554 35777777777653
|
|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=81.05 Aligned_cols=103 Identities=28% Similarity=0.409 Sum_probs=81.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC-Cc-ccccccCCCCCCCCeeccEEEEEeec---CCccEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA-DK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALL 541 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~-d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~L 541 (602)
.+++|+|+.|.+|.+. + .+.-.|||+|.+.|... |+ .|+.|++..||..|.+||+|+|-+.. |+---|
T Consensus 1125 hkvtvkvvaandlkwq---t----sgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ---T----SGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch---h----ccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 5689999999998663 1 23346799999998543 32 34578888899999999999998763 555679
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCcc-Ccc--EEEEc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLR-PGI--HAVPL 576 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~-~Gy--R~ipL 576 (602)
.|+|+|+.....|..+|.++++|.++. .|- -|+||
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 999999998777899999999999884 352 57787
|
|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.67 E-value=3.7e-05 Score=89.62 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=79.2
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lrf 543 (602)
.+|+|-|.-+++|+.- ..+..+||||+.++.+.|....|+||++++.+.||.|||.+.+. +....+ ..|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4688888888888531 22355899999999998888899999999999999999999987 332222 46899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
.||..+....+.|+|.+++||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988888999999999998864
|
|
| >cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00049 Score=71.48 Aligned_cols=136 Identities=18% Similarity=0.270 Sum_probs=95.1
Q ss_pred CCcccccccccCCcccccCCccC---------CCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFS---------SDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELI 183 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~ 183 (602)
+.||++=+|--|||+.--+-... +..--.....=|..|.|-+.|.|.-.+ +++.-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875432211 111122345678899999999996432 2245678887543 38999
Q ss_pred HHHHHHhhcccccCCCceEEEecCCCC------HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhc--cccEEEec
Q 007473 184 KCLRAIKENAFSASPYPVILTFEDHLN------PHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEEL--KYRIIIST 254 (602)
Q Consensus 184 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik~ 254 (602)
+|++.|+++.=.. .=-|||.+ .|.. ++.-..+.+++.+.|||.|+.+.. ....-|+.++| +||.+|-.
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv~ 159 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVIIC 159 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEEE
Confidence 9999999975444 55678877 4443 577888999999999999998753 23456899996 56665543
|
This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00014 Score=75.19 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=77.8
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCcc--EEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA--LLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela--~Lrf~V 545 (602)
.|.|+++.+..+ ..+|.++-+||||.+.+...-....++||.+.+++.||+||+.|.|.+...+|+ -+.+.|
T Consensus 234 ~l~vt~iRc~~l------~ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHL------ASSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeee------eccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 377888876655 235677789999999887433334577999999999999999999999888886 488899
Q ss_pred EecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCc
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEE 583 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~ 583 (602)
||++....++++|-.. ..+||--++++..|.+
T Consensus 308 gd~~~G~s~d~~GG~~------~g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSM------LGGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCccc------ccccccchhhcCcccc
Confidence 9999776788888532 3345655666655554
|
|
| >cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00075 Score=70.45 Aligned_cols=136 Identities=18% Similarity=0.232 Sum_probs=94.5
Q ss_pred CCcccccccccCCcccccCCccCCC---------------------CChHHHHHHHhcCCcEEEEEeecCC-CCCCceEe
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSD---------------------CSDVPITKALKRGVRVIELDLWPNS-AKDDVLVL 171 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~---------------------Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~ 171 (602)
+.||.+..|-.|||+.--+-.-.+. .--.....=|..|+|-+.|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 5799999999999986433221111 1111235667899999999995432 12456788
Q ss_pred ecccccccchHHHHHHHHhhcccccCCCceEEEecC-----CCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhc
Q 007473 172 HGRTLTTPVELIKCLRAIKENAFSASPYPVILTFED-----HLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEEL 246 (602)
Q Consensus 172 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L 246 (602)
||-. +-.+|.+|++.|+++.=....=-|||.++. .++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 8732 238899999999997544444568888863 3345788889999999999999975 223466789999
Q ss_pred c--ccEEEe
Q 007473 247 K--YRIIIS 253 (602)
Q Consensus 247 k--~KIlik 253 (602)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 775443
|
This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be |
| >cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0031 Score=60.87 Aligned_cols=107 Identities=22% Similarity=0.266 Sum_probs=72.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCC--CCCC--CCeeccEEEEEeec---CC
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKK--VDNW--TPVWDDEFTFPLTI---PE 537 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi--~nn~--nPvWNEtf~F~v~~---pe 537 (602)
...+.|+|.++.+++..... ...|.||++.+.-....- ....|+.. .+.+ .+.|||.++|++.. |-
T Consensus 7 ~~~~~i~v~~~h~~~~~~~~------~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWVQ------SFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHhh------ccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 34589999999988753211 125779999887422111 12234432 2332 57899999999764 44
Q ss_pred ccEEEEEEEecCCCC---------CCCccEEEEEeCC----CccCccEEEEccC
Q 007473 538 MALLRVEVRKYSMPE---------KDEFAGQTCLPVF----QLRPGIHAVPLFD 578 (602)
Q Consensus 538 la~Lrf~V~D~d~~~---------~dd~lGq~~lpL~----~L~~GyR~ipL~d 578 (602)
.|.|.|++|+..... ....||++.++|- .|++|...+.|.-
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~ 134 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWP 134 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEecc
Confidence 489999999966433 3568999999985 4789999998863
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c |
| >cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0057 Score=58.27 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=68.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
..++|+|+++.++... ...|.||++++......- ....|+.+.. -++.|||.++|++...+ .|.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 3589999999987542 124779999887421111 1123443332 46899999999987544 48999
Q ss_pred EEEEecCCCC----CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 543 VEVRKYSMPE----KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~----~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
|+||+..... ....+|.+.++|- .|++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999965321 1246999999975 478898777664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c |
| >cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1 | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0052 Score=64.34 Aligned_cols=135 Identities=23% Similarity=0.280 Sum_probs=89.0
Q ss_pred CCcccccccccCCcccc---cCCccCCC------------------------CChHHHHHHHhcCCcEEEEEeecCCCCC
Q 007473 114 TAPLSHYFIYTGHNSYL---IGNQFSSD------------------------CSDVPITKALKRGVRVIELDLWPNSAKD 166 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL---~g~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~WdG~~~~ 166 (602)
+.||.+..|--|||+-- ..+.-.|. .--.....-|..|.|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 36999999999999642 22211111 1111234567899999999996433234
Q ss_pred CceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCC---CHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCh
Q 007473 167 DVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL---NPHLQAKVAQMITQTFGAMLYSPESECLKEFPSP 243 (602)
Q Consensus 167 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP 243 (602)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 568899842 22 99999999999753333445788875 43 3455567888999999999985432 1345789
Q ss_pred hhcc--c-cEEEec
Q 007473 244 EELK--Y-RIIIST 254 (602)
Q Consensus 244 ~~Lk--~-KIlik~ 254 (602)
++|. | +|||-.
T Consensus 161 ~~l~~~~krVIi~y 174 (290)
T cd08616 161 EYLWEKGYQVIVFY 174 (290)
T ss_pred HHHHhCCCEEEEEE
Confidence 9997 3 355544
|
This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to |
| >cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0079 Score=58.20 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=69.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeec---CCccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~Lr 542 (602)
..++|+|+++.++... ....+.||++.+......- ....|+.+.-+-.+.|||.++|++.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~~--------~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNAA--------ERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCccC--------CCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 3589999999988530 1225668988876321111 12345444434569999999998865 4458999
Q ss_pred EEEEecCCCC----------------CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 543 VEVRKYSMPE----------------KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~----------------~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
|.||+..... ....||++.++|- .|++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999965321 1368999999875 478898777664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty |
| >cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0018 Score=59.01 Aligned_cols=73 Identities=19% Similarity=0.373 Sum_probs=54.6
Q ss_pred CCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec----C-----------CccEEEEEEEecCCCC------
Q 007473 494 PQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI----P-----------EMALLRVEVRKYSMPE------ 552 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~----p-----------ela~Lrf~V~D~d~~~------ 552 (602)
.++||+|.+.-.+.+ ..++|+++.++|-|.|+..++|.+.. . +.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998766543 46789999999999999999998641 0 2256889999876432
Q ss_pred ----CCCccEEEEEeCCCc
Q 007473 553 ----KDEFAGQTCLPVFQL 567 (602)
Q Consensus 553 ----~dd~lGq~~lpL~~L 567 (602)
+|-+||.+.||+..|
T Consensus 112 ~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 112 IETSGDILLGTVKIPLRDL 130 (143)
T ss_pred cCcCCcEEEEEEEeeHHHH
Confidence 344678888887766
|
C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc |
| >cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0083 Score=56.80 Aligned_cols=103 Identities=25% Similarity=0.273 Sum_probs=69.3
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-cccccCCCCCCCCeeccEEEEEeecCC---ccEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-MKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
.++|+|....+.... .....+.||++++.-...... ...|+.+...-++.|||.++|++...+ .|.|.|
T Consensus 9 ~~~i~i~~~~~~~~~-------~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINLL-------DSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeecccccc-------CCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 478888877766420 112356789988774221112 223433333357999999999976544 489999
Q ss_pred EEEecCCCC--CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 544 EVRKYSMPE--KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 544 ~V~D~d~~~--~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
+||+.+... ....||++.+||- .|++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999976443 3579999999986 478999988885
|
C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.00034 Score=72.48 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=76.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
..+..+|..|.+|.. .+.++..||||+..+...-....+.+|++..|+.||.|||+..+.....+ ...+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457888888888632 35567789999998875444455688999999999999998877654333 246899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|.|.+....++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999998888653
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.00087 Score=75.28 Aligned_cols=83 Identities=18% Similarity=0.381 Sum_probs=58.2
Q ss_pred ccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCC---------------------------------C---CCC
Q 007473 512 KSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMP---------------------------------E---KDE 555 (602)
Q Consensus 512 ~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd 555 (602)
+-|.+.+.++||.|+|.|.|.|..-.--.+.+-+||+|.- + .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 4577778889999999999998755455688999998742 1 289
Q ss_pred ccEEEEEeCCCccC-cc-EEEEccCCCCCccCCeEEEEEEE
Q 007473 556 FAGQTCLPVFQLRP-GI-HAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 556 ~lGq~~lpL~~L~~-Gy-R~ipL~d~~g~~l~~asL~v~i~ 594 (602)
|+|...+||..+.+ |. +|.-|--.+.+.-..+.+-+++.
T Consensus 259 FLGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lklw 299 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKLW 299 (1103)
T ss_pred cccccccchhcCCcchHHHHhccCcccccccccceEEEEEE
Confidence 99999999999975 53 56666444433333334444433
|
|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0015 Score=75.95 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=75.9
Q ss_pred CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEE
Q 007473 464 PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRV 543 (602)
Q Consensus 464 p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf 543 (602)
|+...++|-|+.|.+|.. .|.++..||||.+.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 455567788888888753 355677899999998752 12346677889999999999999988887778999
Q ss_pred EEEecCCCCCCCccEEEEEeCCC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQ 566 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~ 566 (602)
.|+|+|..+.++.+|+..+.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999989999999988764
|
|
| >cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.008 Score=57.38 Aligned_cols=84 Identities=18% Similarity=0.252 Sum_probs=59.8
Q ss_pred CCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCCc---cEEEEEEEecCCCCCCCccEEEEEeCCC---
Q 007473 494 PQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVEVRKYSMPEKDEFAGQTCLPVFQ--- 566 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~lpL~~--- 566 (602)
+|.||++.+......- ....|+.+.-+-.+.|||.++|+|...++ |.|+|+||+.+..+....+|.+.++|-.
T Consensus 30 ~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~g 109 (159)
T cd08397 30 SDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKDG 109 (159)
T ss_pred CCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCCC
Confidence 5779999887422111 11244444334468899999999876554 8999999998755556789999999864
Q ss_pred -ccCccEEEEcc
Q 007473 567 -LRPGIHAVPLF 577 (602)
Q Consensus 567 -L~~GyR~ipL~ 577 (602)
|+.|.+.+.|.
T Consensus 110 ~Lr~G~~~l~lw 121 (159)
T cd08397 110 TLRRGRQKLRVW 121 (159)
T ss_pred cEecCCEEEEEE
Confidence 77898888875
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty |
| >cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0093 Score=57.30 Aligned_cols=64 Identities=23% Similarity=0.216 Sum_probs=51.5
Q ss_pred ccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCH
Q 007473 134 QFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNP 211 (602)
Q Consensus 134 Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 211 (602)
+...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|.||++..++ -+.|.||.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999995444 46999998 7789999998776 345677766653
|
The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho |
| >cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0083 Score=60.41 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45789999999999999999999996545 46999999887
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0068 Score=60.63 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=34.7
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999997555 56999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG) |
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0064 Score=69.70 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=75.9
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEE
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
..+...|++++|. + . -.|+|..+-..| .+.+||.+.+++.||+||+.-.|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~-~--~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE-M--K----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh-h--c----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3466888999886 1 1 136776655556 367899999999999999999999988788888999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc-----cEEEEccCCCC
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFDRKG 581 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d~~g 581 (602)
|+|.+..+.++++|-+.+++..+-.- ++...++|++|
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dg 156 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSS 156 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999877655321 22234666654
|
|
| >cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.026 Score=54.83 Aligned_cols=102 Identities=19% Similarity=0.159 Sum_probs=64.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc---cEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVE 544 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel---a~Lrf~ 544 (602)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||.++|++...++ |.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 48888888763211 11122345888877642111123345555445579999999999876554 889999
Q ss_pred EEecCCC----------------CCCCccEEEEEeCC----CccCccEEEEc
Q 007473 545 VRKYSMP----------------EKDEFAGQTCLPVF----QLRPGIHAVPL 576 (602)
Q Consensus 545 V~D~d~~----------------~~dd~lGq~~lpL~----~L~~GyR~ipL 576 (602)
||+.... ...-.||++.++|- .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 9985211 12457888888875 47888776655
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir |
| >cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.007 Score=51.64 Aligned_cols=90 Identities=12% Similarity=0.225 Sum_probs=60.2
Q ss_pred EEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEEEEec
Q 007473 471 VKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVRKY 548 (602)
Q Consensus 471 V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~V~D~ 548 (602)
|+|+.+.++..+. .+ ...+..||+=-+. .+ .....||.+.+...||+|+|+|.|.+....+ ..|.|.|+.
T Consensus 3 itv~~c~d~s~~~---~~--~e~~~i~ikg~~t-l~-kpv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~- 74 (103)
T cd08684 3 ITVLKCKDLSWPS---SC--GENPTIYIKGILT-LP-KPVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT- 74 (103)
T ss_pred EEEEEeccccccc---cc--CcCCeeEEEEEEe-cC-CCccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence 5677777765431 11 1123334442222 12 2356788888888999999999999876555 357788887
Q ss_pred CCCCCCCccEEEEEeCCCccC
Q 007473 549 SMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~ 569 (602)
...+.+.||++.+.++++.+
T Consensus 75 -~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 75 -QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred -cCCccceeeEEEeecccCCH
Confidence 34568899999999988754
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos |
| >cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=58.95 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+.|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999997555 56999999886
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor. |
| >PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0068 Score=60.66 Aligned_cols=41 Identities=24% Similarity=0.297 Sum_probs=32.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
..+.|.+++..|+..|+++||+|||=-.| +.|||+|..++-
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l~ 48 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTLD 48 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBST
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCeee
Confidence 34899999999999999999999996555 579999986543
|
; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B .... |
| >cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.018 Score=57.93 Aligned_cols=40 Identities=25% Similarity=0.435 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999996555 46999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE. |
| >cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.028 Score=57.45 Aligned_cols=40 Identities=30% Similarity=0.370 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
=+-|.++|..|+..||..||+||+=-.| +.|||+|..||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999996555 579999999873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.034 Score=56.21 Aligned_cols=98 Identities=21% Similarity=0.305 Sum_probs=67.9
Q ss_pred cCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------cchHHHHHHHHhhc--cc-
Q 007473 124 TGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT------PVELIKCLRAIKEN--AF- 194 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 194 (602)
-|||-|.- --....||..||-.||+|||=- + ++.+|.|-..+.+ ++.+..+.+.++.. +|
T Consensus 4 hsHNDY~r---------~~Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWR---------KRPLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccc---------ccchHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 59999984 2246679999999999999953 2 4578888766543 35566677666544 23
Q ss_pred ccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCC
Q 007473 195 SASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSP 232 (602)
Q Consensus 195 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~ 232 (602)
....-|++|-||..-+...--.++.-.-+-+.+..+..
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~~ 110 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYLS 110 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCcee
Confidence 34567999999999987654444445555566666553
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.046 Score=56.66 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=89.2
Q ss_pred cCCCCcccccccccCCccccc---CCccC---CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 111 QDMTAPLSHYFIYTGHNSYLI---GNQFS---SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~---g~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
-+-+.||++=.|--||||.-. +..+. +..--.....=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 356789999999999998743 22211 1122223566789999999999854 257999963 2468999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhcccc-EEEecCC
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYR-IIISTKP 256 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 256 (602)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998642333344999996554332222355788999999998753 222222 67777654 4544543
|
The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u |
| >PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.035 Score=51.78 Aligned_cols=82 Identities=27% Similarity=0.372 Sum_probs=53.9
Q ss_pred ceEEEEEecCCCCcc--cccccCCCCC-CCCeeccEEEEEeec---CCccEEEEEEEecCCCCCC----CccEEEEEeCC
Q 007473 496 FYTRVGIAGVPADKK--MKSTKKKVDN-WTPVWDDEFTFPLTI---PEMALLRVEVRKYSMPEKD----EFAGQTCLPVF 565 (602)
Q Consensus 496 pyV~V~i~G~p~d~~--k~kTkvi~nn-~nPvWNEtf~F~v~~---pela~Lrf~V~D~d~~~~d----d~lGq~~lpL~ 565 (602)
.||++.+.-....-. ...|+.+.-+ .++.|||.++|++.. |-.|.|.|+|+..+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 366666652111111 2245555444 689999999999864 5558999999997755444 68999999976
Q ss_pred C----ccCccEEEEcc
Q 007473 566 Q----LRPGIHAVPLF 577 (602)
Q Consensus 566 ~----L~~GyR~ipL~ 577 (602)
. |++|...+.|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 4 67888888775
|
7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A .... |
| >cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.099 Score=54.49 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=88.1
Q ss_pred CCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEe---ecC----CCCCCceEeecccccccchHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDL---WPN----SAKDDVLVLHGRTLTTPVELIKCL 186 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---WdG----~~~~~piv~HG~Tlts~i~f~dvi 186 (602)
++||++..|-.|||+.-.+---.+..--.....=|..|.|-+.|=| ++. ....+-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987554221122222335667899999988866 221 01123234454 44567999999
Q ss_pred HHHhhcccccCCCceEEEecC-----CCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccc---cEEEecC
Q 007473 187 RAIKENAFSASPYPVILTFED-----HLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKY---RIIISTK 255 (602)
Q Consensus 187 ~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 255 (602)
+.|+.+.=....=-|||+|-+ ||-.+.+..+.+.+.++|++.-+.+. ......-|+.++|.+ ++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSAQEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhHHHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999986544455669999942 44334446778889999998544432 111233578999944 4555443
|
This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl |
| >cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.068 Score=54.16 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|-.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999995444 46999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.058 Score=54.78 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
+-|..+|..|+..||+.||+|+.=-.| +.|||.|-.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 778999999999999999999997555 46999998776
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.088 Score=45.14 Aligned_cols=63 Identities=10% Similarity=0.292 Sum_probs=49.9
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHH--hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEV--QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|-.+|.+|++. ..+|+.++|+..|.++ .++. .+.+++.+++...... +.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~d-------~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDRN-------KDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCC-------CCCCCcHHHHHHHHH
Confidence 477899999973 3599999999999752 4664 6889999999876422 346899999998885
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.082 Score=54.35 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|..+|.+|+..||..||+|+|=-.| +.|||.|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996555 46999998765
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G |
| >cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.09 Score=52.72 Aligned_cols=79 Identities=22% Similarity=0.350 Sum_probs=54.9
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------------------------cc-hHHHHHHHH
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT------------------------PV-ELIKCLRAI 189 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------------------------~i-~f~dvi~aI 189 (602)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+.. +| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345889999999999999999999995544 4699999877631 24 589999876
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHH
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQ 223 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~ 223 (602)
+.. +.|-||.-.. .....+++.+++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~~ 114 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVEK 114 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHHH
Confidence 441 2466666542 223445555543
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form. |
| >cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.16 Score=52.28 Aligned_cols=39 Identities=26% Similarity=0.487 Sum_probs=33.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 175 (602)
.-+-|..+|..|+..|+..||+|||=-.| +.|||+|..|
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45789999999999999999999995444 4699999863
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.17 Score=49.69 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=42.0
Q ss_pred ChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 140 SDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 140 s~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
+..++.+|+.. .-||+|++.- | +.+||.|-.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 58899999998 9999999986 5 5799999999988888999998874
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.049 Score=56.16 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=35.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
-+-|.+++..|+..||++||+|++=-.| +.|||.|-.|+..
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 4778999999999999999999997655 5799999998643
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4. |
| >KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.054 Score=58.02 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=88.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-CCc-------
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-PEM------- 538 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-pel------- 538 (602)
..|.+.|.+++.++.+....+ .|.||+++..-......+.+|.+|+++-+|.|+|.|...+.. +.+
T Consensus 367 ~elel~ivrg~~~pvp~gp~h------ld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGPMH------LDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCchh------HHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 347778888888775421111 467999887643323356789999999999999999988753 211
Q ss_pred ---cEEEEEEEecCCC-CCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 539 ---ALLRVEVRKYSMP-EKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 539 ---a~Lrf~V~D~d~~-~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
--++|.|+....+ .+|.++|.+-+-+.-|..- ...++|+| |+...++.|-|+|.+.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRiR~ 504 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRIRQ 504 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEEec
Confidence 2488999997654 4588999999988877654 34688875 56667889999998865
|
|
| >cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.056 Score=55.00 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45789999999999999999999995444 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.079 Score=54.26 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 4778999999999999999999996555 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo |
| >cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.11 Score=53.01 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+-|..++..|+..||..||+|||=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999997555 569999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.14 Score=52.87 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=35.5
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999995544 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated. |
| >cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.13 Score=53.58 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=39.7
Q ss_pred cccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 129 YLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 129 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
|+.+.-..=+.+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996545 4799999988753
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism. |
| >cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.12 Score=52.06 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..+|.+|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 579999999874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.13 Score=53.96 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|.+++..|+..||+.||+|+|=-.| +.|||+|-.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4778999999999999999999996545 579999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family. |
| >PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.16 Score=54.75 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=36.0
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||+|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999996555 469999998764
|
|
| >KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.11 Score=55.14 Aligned_cols=107 Identities=22% Similarity=0.245 Sum_probs=78.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.+.+.|+||.|.+|... ....+.++|||+|++.+...-..+++|+...++..|.+-..+.|.=..| -..|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k-----~~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK-----PGSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEeccccccc-----CCcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 35699999999999642 1223468999999999766656688999999999999988888875433 45788888
Q ss_pred Ee-cCCCCCCCccEEEEEeCCCcc----CccEEEEccC
Q 007473 546 RK-YSMPEKDEFAGQTCLPVFQLR----PGIHAVPLFD 578 (602)
Q Consensus 546 ~D-~d~~~~dd~lGq~~lpL~~L~----~GyR~ipL~d 578 (602)
|. +.....+.|+|.+.+-+..|. ++.-|.+|+.
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlfg 379 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLFG 379 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeeccC
Confidence 86 344455778998888777764 4455666653
|
|
| >cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5 | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.14 Score=53.20 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=34.0
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
|-+..++.+|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996555 57999999988
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs. |
| >cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.15 Score=54.06 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=36.0
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|..+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 455889999999999999999999996555 469999999873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.55 Score=40.31 Aligned_cols=64 Identities=13% Similarity=0.263 Sum_probs=46.4
Q ss_pred hHHHHHHHhhCC-C--CccCHHHHHHHHHHHhC---CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG-G--THMTAEQLWQFLVEVQG---HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~-~--~~l~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-|..+|.+|++. + ..|+.++|+.||..+-. ....+...+.+++..+-.. +.+.+++++|..+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d-------~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLN-------SDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHH
Confidence 467899999853 2 38999999999998631 1123567788888865421 346899999998875
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.03 E-value=0.31 Score=54.46 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=68.5
Q ss_pred ccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCC----CCCCccEEEEEeCCCcc-CccEEEEccCCCCCccCC
Q 007473 512 KSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMP----EKDEFAGQTCLPVFQLR-PGIHAVPLFDRKGEELGS 586 (602)
Q Consensus 512 ~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~----~~dd~lGq~~lpL~~L~-~GyR~ipL~d~~g~~l~~ 586 (602)
.+|.++.+..||.|-++|.....+.+.-.|+|.|+|-+.. ...+|+|++..-++.+. ...+.++|.-..++.-..
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4788999999999999998888888888999999997754 34789999988888764 456677776666666667
Q ss_pred eEEEEEEEEEE
Q 007473 587 ARLLMRFEFYE 597 (602)
Q Consensus 587 asL~v~i~~~e 597 (602)
+++.++++-.+
T Consensus 123 g~iti~aee~~ 133 (529)
T KOG1327|consen 123 GTITISAEEDE 133 (529)
T ss_pred ccEEEEeeccc
Confidence 88888776544
|
|
| >cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.16 Score=53.20 Aligned_cols=41 Identities=22% Similarity=0.238 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.=+.|..+|..|+..||..||+||+=-.| +.|||+|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34789999999999999999999996555 469999998774
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), |
| >cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.17 Score=53.37 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
-+.+..+|..|+..|+..||+|++=-.| +.+||.|-.+|..
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~r 54 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLDN 54 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhcC
Confidence 4778999999999999999999996555 4699999998743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv |
| >cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.18 Score=53.48 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=39.2
Q ss_pred CCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 125 GHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 125 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.|.-| .-..-+.|..+|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 55553 22345889999999999999999999997655 579999998864
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia |
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.84 Score=39.48 Aligned_cols=64 Identities=9% Similarity=0.166 Sum_probs=46.1
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-|..+|.+||++...|+..+|+..|+.+=.. ...+++.+..|+...-. -+.+.++|.+|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~-------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD-------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC-------CCCCcCcHHHHHHHHH
Confidence 4678999999888999999999999765321 01235566777766532 1346799999998875
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.86 Score=39.29 Aligned_cols=65 Identities=11% Similarity=0.217 Sum_probs=47.8
Q ss_pred hhHHHHHHHhhC-CC-C-ccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE-GG-T-HMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~-~~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|+.|+. ++ . .||.++|+..|..+.++ ...+.+.+.+|+..+-.. +.+.+++++|..+|.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n-------~dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSN-------KDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCC-------CCCCCCHHHHHHHHH
Confidence 357788999994 33 3 59999999999876432 123567889999886421 346899999998875
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins | Back alignment and domain information |
|---|
Probab=91.49 E-value=0.18 Score=52.40 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=34.8
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
|-+..++..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996555 579999999875
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp |
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.57 Score=39.99 Aligned_cols=64 Identities=11% Similarity=0.222 Sum_probs=48.1
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHGGVS----IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.|..+|.+|+.. ...|+.++|+.+|...-++ ..+ .+++..++..+-.. +.+.++++.|..++.+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~d-------~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDTN-------QDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHHH
Confidence 477899999965 4699999999999754433 244 67888888876421 3468999999988763
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.19 Score=51.26 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=35.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-|-|.+++..|+..|+..||+||.=-.| +.|||+|=.|+.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 34778999999999999999999996555 569999998875
|
|
| >cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins | Back alignment and domain information |
|---|
Probab=90.96 E-value=0.3 Score=49.17 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+.|.+||.+|+..|++.||+|++=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip |
| >cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins | Back alignment and domain information |
|---|
Probab=90.69 E-value=0.26 Score=52.17 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=36.6
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
+.-+.+..+|..|+..||..||+||+=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 445889999999999999999999996555 5799999988743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. |
| >cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=90.31 E-value=0.37 Score=48.69 Aligned_cols=40 Identities=25% Similarity=0.224 Sum_probs=34.5
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..++..|+..|++-||+|++=-.| +.+||+|-.|++
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~~ 53 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDES 53 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcCc
Confidence 3788999999999999999999996555 579999998763
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] | Back alignment and domain information |
|---|
Probab=90.29 E-value=7.4 Score=35.72 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=73.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeec---C-----C
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTI---P-----E 537 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~---p-----e 537 (602)
..+.|+|....++|. .+..|.|.+...........|.... .+..-.||++|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 457778888777753 1224445544321111123444332 34567899999998652 1 1
Q ss_pred ccEEEEEEEecCCCCCCCccEEEEEeCCCccCc-----cEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 538 MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 538 la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
-..+.|.|+.....++...+|.+.|.|...-.- .+.++|... +...|+|.|.|.+.++.
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~~~~~ 138 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISLSELR 138 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEEEECc
Confidence 136889998875333336899999999987542 345666655 45568999999998765
|
Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1). |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.75 Score=34.98 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=41.0
Q ss_pred CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 39 GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 39 ~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 2 ~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~-------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD-------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS-------SSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC-------CCCCCCHHHHHHHHH
Confidence 3679999999999 55666437889999999998633 357899999999885
|
... |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=90.27 E-value=1.1 Score=38.58 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=50.0
Q ss_pred hHHHHHHHhhC--CCCccCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 27 DVKEMFKKYAE--GGTHMTAEQLWQFLVEVQGHGGVSI-EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 27 el~~if~~~~~--~~~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.|..+|+.|.. +..+|+..+|+..|..+=++ .++. +++.++|...-.. +.+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~d-------~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDVN-------QDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHH
Confidence 57889999997 46899999999999975344 3566 7899998775421 3568999999988864
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.35 Score=50.94 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=36.2
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|-.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999996555 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP |
| >smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain | Back alignment and domain information |
|---|
Probab=89.66 E-value=1.5 Score=38.44 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=44.6
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-cccccCCCCCCCCeeccEEEEEeecCC---ccEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-MKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRVE 544 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf~ 544 (602)
+.+.+....+.+... ..+..+.||++++......-. ...|+.+.-...+.|||.++|++...+ .|.|.|+
T Consensus 13 ~~~~~~~~~~~~l~~------~~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~ 86 (100)
T smart00142 13 LVITIALIHGIPLNW------SRDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCIT 86 (100)
T ss_pred eEEEEEEeeCCCccc------ccCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEE
Confidence 455555555554321 111147799998874221111 224444333345899999999987544 4899999
Q ss_pred EEecC
Q 007473 545 VRKYS 549 (602)
Q Consensus 545 V~D~d 549 (602)
||+..
T Consensus 87 i~~~~ 91 (100)
T smart00142 87 IYEVK 91 (100)
T ss_pred EEEee
Confidence 99854
|
Outlier of C2 family. |
| >cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins | Back alignment and domain information |
|---|
Probab=89.38 E-value=2 Score=42.15 Aligned_cols=55 Identities=24% Similarity=0.430 Sum_probs=37.0
Q ss_pred ccccccCCCCCCCCeeccEEEEEeecCC--ccEEEEEEEecCCCCCC--CccEEEEEeC
Q 007473 510 KMKSTKKKVDNWTPVWDDEFTFPLTIPE--MALLRVEVRKYSMPEKD--EFAGQTCLPV 564 (602)
Q Consensus 510 ~k~kTkvi~nn~nPvWNEtf~F~v~~pe--la~Lrf~V~D~d~~~~d--d~lGq~~lpL 564 (602)
..++|-+..-+-+|.|+|++...+.... -+.|+|.++......+. ..+|-+.+||
T Consensus 53 se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL 111 (189)
T cd08695 53 SEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL 111 (189)
T ss_pred ceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence 4567888888899999999988876543 47899988775432211 3345444544
|
Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int |
| >PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional | Back alignment and domain information |
|---|
Probab=89.35 E-value=3.8 Score=44.39 Aligned_cols=107 Identities=19% Similarity=0.257 Sum_probs=69.1
Q ss_pred HHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHHHhhccccc--CCCceEEEecC---CCCHHHHHHH
Q 007473 144 ITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRAIKENAFSA--SPYPVILTFED---HLNPHLQAKV 217 (602)
Q Consensus 144 Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvILSlE~---Hcs~~qQ~~m 217 (602)
...=|..|.|-+.|=|=-.+ +.++-.++||.- .++|.||++.|+++.=.. ..=-|||.+-. +=....|.++
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 34557889999888884322 223456666642 378999999999864221 23457777743 2234555567
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCChhhcc-----ccEEEecCCC
Q 007473 218 AQMITQTFGAMLYSPESECLKEFPSPEELK-----YRIIISTKPP 257 (602)
Q Consensus 218 a~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 257 (602)
.+.|+. |||+|. |..... . -+.++|- .+|||-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 777777 999987 333322 2 3788887 6788887543
|
|
| >cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins | Back alignment and domain information |
|---|
Probab=89.27 E-value=0.43 Score=50.03 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=36.3
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++..
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~r 61 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTISV 61 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCccee
Confidence 345789999999999999999999996555 5799999987743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins | Back alignment and domain information |
|---|
Probab=88.84 E-value=0.47 Score=50.38 Aligned_cols=43 Identities=19% Similarity=0.279 Sum_probs=36.6
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
..-|-|..+|..|+..||.-||+||+=-.| +.|||.|-.|+..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445888999999999999999999996555 5799999998743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=87.95 E-value=1.9 Score=36.75 Aligned_cols=65 Identities=8% Similarity=0.167 Sum_probs=48.6
Q ss_pred hhHHHHHHHhh-CC-CC-ccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EG-GT-HMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~-~~-~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|. .+ .. .|+.++|+..|+..-+.. ..+.+++.+|+..+... ..+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 57889999996 54 35 499999999998643331 24678899999987522 246799999998875
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=87.77 E-value=0.33 Score=57.21 Aligned_cols=98 Identities=19% Similarity=0.283 Sum_probs=68.7
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eec--------CCcc
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTI--------PEMA 539 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~--------pela 539 (602)
+++-|..|..|..+ ++.+..|||+.|...| +.+.|-++.+++||.|+.+..|. +.. ...-
T Consensus 208 lR~yiyQar~L~a~------dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~pp 276 (1105)
T KOG1326|consen 208 LRSYIYQARALGAP------DKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPP 276 (1105)
T ss_pred hHHHHHHHHhhcCC------CcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCC
Confidence 44445555555432 3445679999999887 56789999999999999999885 321 1124
Q ss_pred EEEEEEEecCCCCCCCccEEEEEeCCCc-c-CccEEEEcc
Q 007473 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQL-R-PGIHAVPLF 577 (602)
Q Consensus 540 ~Lrf~V~D~d~~~~dd~lGq~~lpL~~L-~-~GyR~ipL~ 577 (602)
.+.|.|+|.|..+.++|.|.......-+ . +--.++|+.
T Consensus 277 i~v~e~yd~dr~g~~ef~gr~~~~p~V~~~~p~lkw~p~~ 316 (1105)
T KOG1326|consen 277 IRVFEVYDLDRSGINEFKGRKKQRPYVMVQCPALKWVPTM 316 (1105)
T ss_pred eEEEEeehhhhhchHHhhcccccceEEEecCCccceEEee
Confidence 6889999999999999999864433322 2 335667765
|
|
| >cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins | Back alignment and domain information |
|---|
Probab=86.80 E-value=3.9 Score=40.33 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=49.3
Q ss_pred ccccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCC-C---CCccEEEEEeCC-----CccCccEEEEcc
Q 007473 510 KMKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPE-K---DEFAGQTCLPVF-----QLRPGIHAVPLF 577 (602)
Q Consensus 510 ~k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~lGq~~lpL~-----~L~~GyR~ipL~ 577 (602)
..++|-+..-+-+|.|+|++...+... +-+.|+|.++...... + ...+|-+.+||- .|+.|-..++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 456777777788999999998887644 3478999997754321 1 246788888884 377888888886
|
Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A | Back alignment and domain information |
|---|
Probab=86.68 E-value=2.5 Score=41.06 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=37.5
Q ss_pred cccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCCCC---CccEEEEEeCCC----ccCccEEEEcc
Q 007473 511 MKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPEKD---EFAGQTCLPVFQ----LRPGIHAVPLF 577 (602)
Q Consensus 511 k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d---d~lGq~~lpL~~----L~~GyR~ipL~ 577 (602)
...|.+...+-+|.|+|+|..++..+ +-..|.|++++.....+. ..+|.+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999998887643 346899999986543211 577777777764 33456667765
|
|
| >PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain [] | Back alignment and domain information |
|---|
Probab=86.46 E-value=0.93 Score=33.73 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=24.2
Q ss_pred hHHHHHHHhh---CCCCccCHHHHHHHHHHH
Q 007473 27 DVKEMFKKYA---EGGTHMTAEQLWQFLVEV 54 (602)
Q Consensus 27 el~~if~~~~---~~~~~l~~~~~~~Fl~~~ 54 (602)
-|..+|.+|| ++...|+..+|+..|+++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 567999999999999864
|
S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B .... |
| >COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.28 E-value=0.78 Score=46.70 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=32.9
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 175 (602)
+-|.++|..|+..|+.+||+|+.=-.| +.+||+|=+|
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 778999999999999999999997666 5799999883
|
|
| >cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins | Back alignment and domain information |
|---|
Probab=86.16 E-value=0.95 Score=47.69 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=38.6
Q ss_pred cccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 120 YFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 120 YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
||=|+|-.. ..|. ++...++.|...|++-||+||+=-.| +.|||||-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 777776522 1111 46789999999999999999995444 4699999998743
|
This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos |
| >cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=85.79 E-value=0.75 Score=46.69 Aligned_cols=39 Identities=28% Similarity=0.355 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-+..+|..|+..|+ -||+||+=-.| +.|||+|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678999999999999 89999997655 579999998864
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4 | Back alignment and domain information |
|---|
Probab=85.69 E-value=0.8 Score=48.38 Aligned_cols=39 Identities=28% Similarity=0.494 Sum_probs=34.5
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+-++++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 778999999999999999999997655 569999999874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet. |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=85.51 E-value=2.6 Score=33.13 Aligned_cols=64 Identities=20% Similarity=0.470 Sum_probs=42.8
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 28 VKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 28 l~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
|..+|+.|=.+ ...|+.++|..+++..... .+.+...+.++..-+... .-+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~D---~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFREFD---TDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHHHT---TTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhC---CCCcCCCcHHHHhccC
Confidence 67899999544 6899999999999987643 234444555444322111 1135789999999875
|
... |
| >PF15627 CEP76-C2: CEP76 C2 domain | Back alignment and domain information |
|---|
Probab=85.51 E-value=12 Score=35.75 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=83.1
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC------c
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE------M 538 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe------l 538 (602)
....|.|+|+.|+-..... .+.-+..+..+.+.++- ..++++|+.+.-..+|.|+|.|-|++.... .
T Consensus 7 ~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~~ 79 (156)
T PF15627_consen 7 GRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGSTA 79 (156)
T ss_pred CceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccch
Confidence 4567999999987442110 00002234444555442 137889999999999999999999986442 1
Q ss_pred -------cEEEEEEEecCCCCCCCccEEEEEeCCCc-cCccE----EEEccCCCCC-ccCCeEEEEEEEEEE
Q 007473 539 -------ALLRVEVRKYSMPEKDEFAGQTCLPVFQL-RPGIH----AVPLFDRKGE-ELGSARLLMRFEFYE 597 (602)
Q Consensus 539 -------a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L-~~GyR----~ipL~d~~g~-~l~~asL~v~i~~~e 597 (602)
.-|.+.|--.|..+...++|...+.-..+ ..|+. .|.|....++ ..+-+.|-+++++..
T Consensus 80 ~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELlP 151 (156)
T PF15627_consen 80 TTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELLP 151 (156)
T ss_pred hHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEeec
Confidence 23677777767666568999988877654 56664 4677776655 456677878887653
|
|
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=84.95 E-value=4.5 Score=29.97 Aligned_cols=60 Identities=18% Similarity=0.406 Sum_probs=45.2
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 28 VKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 28 l~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
+..+|..|-.+ ...|+.++|...++... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~-------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD-------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHh
Confidence 67789988755 46899999999998643 3 35677788888887532 23579999998876
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins | Back alignment and domain information |
|---|
Probab=84.93 E-value=0.99 Score=48.61 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-|-+..+|..|+..||.-||+|++=-.| +.|||.|-.|+.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996555 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=84.77 E-value=4 Score=35.10 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=46.9
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..+-.+ ...|+.++|..+|+. . ..+.+++..|+..+... ..+.+++++|..+|.
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~---~~~~~ev~~i~~~~d~~-------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK-S---GLPQTLLAKIWNLADID-------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHH-c---CCCHHHHHHHHHHhcCC-------CCCCcCHHHHHHHHH
Confidence 4677788888654 578999999999987 2 25778888888876521 246799999998775
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.67 E-value=1.3 Score=49.75 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=59.1
Q ss_pred CCCCCCCceEEEEEe-cCCCCcccccccCCCCCCCCeeccEE-EEE-eecCC-ccEEEEEEEecCCCCCCCccEEEEEeC
Q 007473 489 KFWSPPQFYTRVGIA-GVPADKKMKSTKKKVDNWTPVWDDEF-TFP-LTIPE-MALLRVEVRKYSMPEKDEFAGQTCLPV 564 (602)
Q Consensus 489 d~~s~~DpyV~V~i~-G~p~d~~k~kTkvi~nn~nPvWNEtf-~F~-v~~pe-la~Lrf~V~D~d~~~~dd~lGq~~lpL 564 (602)
+.++.+|||.++.-. +.......++|.+++++.||.|-... ... +...+ -+.+.+.+||++..++++++|++..++
T Consensus 152 d~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt~ 231 (529)
T KOG1327|consen 152 DFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTTL 231 (529)
T ss_pred cccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEecccH
Confidence 567889999887644 33333345799999999999997532 221 22222 356889999999888789999999999
Q ss_pred CCccC
Q 007473 565 FQLRP 569 (602)
Q Consensus 565 ~~L~~ 569 (602)
..++.
T Consensus 232 ~~~~~ 236 (529)
T KOG1327|consen 232 SELQE 236 (529)
T ss_pred HHhcc
Confidence 98864
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=84.23 E-value=5.2 Score=34.19 Aligned_cols=64 Identities=8% Similarity=0.185 Sum_probs=47.1
Q ss_pred hHHHHHHHhhC-C-CC-ccCHHHHHHHHHHHh---CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAE-G-GT-HMTAEQLWQFLVEVQ---GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~-~-~~-~l~~~~~~~Fl~~~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+|..+|+.|.+ + .. .|+.++|+..|+.+= .....+.+++.+++...-.. +.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-------~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-------GDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 68899999973 4 45 599999999998611 11235778899999876421 346899999998875
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins | Back alignment and domain information |
|---|
Probab=84.06 E-value=2.4 Score=41.05 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=47.6
Q ss_pred cccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCC-----CCCccEEEEEeCCC-----ccCccEEEEccC
Q 007473 513 STKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPE-----KDEFAGQTCLPVFQ-----LRPGIHAVPLFD 578 (602)
Q Consensus 513 kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-----~dd~lGq~~lpL~~-----L~~GyR~ipL~d 578 (602)
-|.++..+-+|.|+|++...+... +...|.|++++.+... ....+|-+.+||-. ++.|...+|++-
T Consensus 55 ~~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k 132 (178)
T cd08679 55 YTSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYK 132 (178)
T ss_pred EEEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEe
Confidence 344444458899999998887543 3468999999865332 25678888899887 677888888763
|
Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo |
| >cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins | Back alignment and domain information |
|---|
Probab=83.80 E-value=1.2 Score=48.17 Aligned_cols=40 Identities=15% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecc-cc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGR-TL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~-Tl 176 (602)
.-|-|.++|..|+.+|+.-||+|++=-.| +.|||.|-. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34788999999999999999999996555 469999995 44
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.51 E-value=1.5 Score=47.12 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+.|..+|.+|...|+.|||+|+-...| +.+|+.|--|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 578999976655
|
|
| >PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions | Back alignment and domain information |
|---|
Probab=82.72 E-value=2.5 Score=36.50 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCCccCHHHHHHHHHHHhCCCC-----C----CHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 28 VKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGG-----V----SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 28 l~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~-----~----~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+++|+.+++....|+...|..||.+..+-+. . .+..+++.++.- ..+..++.+.|+.+|++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~---------~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV---------QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT---------TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc---------CCCCccCHHHHHHHHHh
Confidence 57899999988899999999999998775431 1 122233333321 02467999999999997
Q ss_pred C
Q 007473 99 T 99 (602)
Q Consensus 99 ~ 99 (602)
.
T Consensus 76 e 76 (90)
T PF09069_consen 76 E 76 (90)
T ss_dssp -
T ss_pred C
Confidence 3
|
The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A. |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=82.11 E-value=5.4 Score=36.71 Aligned_cols=66 Identities=12% Similarity=0.315 Sum_probs=50.7
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|..+|...+ . .++.+++..++..+... +.+.++++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN-------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHhc
Confidence 346788999988654 47899999999998654 3 36788899999887632 2456999999998864
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=81.97 E-value=5.2 Score=36.20 Aligned_cols=65 Identities=15% Similarity=0.354 Sum_probs=47.1
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+..+..+|..|-.+ ...|+.++|..+|..... ..+.+.+..++.++... +.+.+++++|..+|.+
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD-------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC-------CCCcCcHHHHHHHHhc
Confidence 45677888888654 477999999999987532 35677788888765421 2457999999998875
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=80.22 E-value=7.5 Score=33.29 Aligned_cols=66 Identities=12% Similarity=0.220 Sum_probs=49.2
Q ss_pred hhHHHHHHHhhC-C--CCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAE-G--GTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~-~--~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++...|..|.. + ...|+.++|+..|+...+. ...+.+++..++..+... +.+.++++.|..++.+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~-------~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN-------RDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHH
Confidence 578889999975 4 3799999999999863321 134678889999876522 3468999999988753
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase | Back alignment and domain information |
|---|
Probab=80.19 E-value=0.39 Score=32.16 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=12.8
Q ss_pred cCCCceEEEecCCC
Q 007473 196 ASPYPVILTFEDHL 209 (602)
Q Consensus 196 ~S~yPvILSlE~Hc 209 (602)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
|
Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 602 | ||||
| 1qas_A | 622 | 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies | 3e-49 | ||
| 1djg_A | 624 | Phosphoinositide-Specific Phospholipase C-Delta1 Fr | 3e-49 | ||
| 2fju_B | 799 | Activated Rac1 Bound To Its Effector Phospholipase | 2e-44 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 9e-24 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 7e-22 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 2e-23 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 5e-22 | ||
| 3qr0_A | 816 | Crystal Structure Of S. Officinalis Plc21 Length = | 8e-22 | ||
| 3qr1_A | 813 | Crystal Structure Of L. Pealei Plc21 Length = 813 | 5e-20 |
| >pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622 | Back alignment and structure |
|
| >pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624 | Back alignment and structure |
|
| >pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 | Back alignment and structure |
|
| >pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 602 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 1e-141 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 1e-125 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 1e-123 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 1e-118 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 2e-21 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 6e-07 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 9e-06 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 1e-05 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 5e-05 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 6e-05 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 6e-05 | |
| 2plc_A | 274 | PI-PLC, phosphatidylinositol-specific phospholipas | 1e-04 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 2e-04 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 2e-04 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 3e-04 | |
| 3v1h_A | 306 | 1-phosphatidylinositol phosphodiesterase; PI-catio | 3e-04 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 9e-04 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 423 bits (1088), Expect = e-141
Identities = 153/578 (26%), Positives = 237/578 (41%), Gaps = 35/578 (6%)
Query: 24 PPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFT 83
A++ F++ A ++ E+L FL Q A ++++
Sbjct: 78 QRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETA---KA 134
Query: 84 RRSLTVEDFHHYLFSTDLNP--PLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSD 141
+R +T + F YL S D N +VYQDM PLSHY + + HN+YL+ +Q + S
Sbjct: 135 QRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSST 194
Query: 142 VPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPV 201
+AL +G R +ELD W ++ ++ HG T T+ + LRAI++ AF ASPYPV
Sbjct: 195 EAYIRALCKGCRCLELDCWDGPNQEPIIY-HGYTFTSKILFCDVLRAIRDYAFKASPYPV 253
Query: 202 ILTFEDHLNPHLQAKVAQMITQTFGAMLYS-PESECLKEFPSPEELKYRIIISTKPPKER 260
IL+ E+H + Q +A+ + G +L P PSPE+LK +I++ K
Sbjct: 254 ILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGL 313
Query: 261 REKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACD 320
G N + D ++ +
Sbjct: 314 LPAGGENGSEAT------------------------DVSDEVEAAEMEDEAVRSQVQHKP 349
Query: 321 RVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVR 380
+ + +I G S SE + + G VR
Sbjct: 350 KEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVR 409
Query: 381 FTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGY 440
+ RIYP R +SSNY P+ W G Q+VALN Q G + + G F+ N GCGY
Sbjct: 410 HNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGY 469
Query: 441 VKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRV 500
V KP FL + P + +++ + G L + P V
Sbjct: 470 VLKPAFLRDPNTTFNSRALTQ-GPWWRPERLRVRIISGQQLPKVNKNKNSIVDP--KVIV 526
Query: 501 GIAGVPADKKMKSTKKKVDNWT-PVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQ 559
I GV D + T +N P WD EF F +T+P++AL+R V Y K++F GQ
Sbjct: 527 EIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQ 586
Query: 560 TCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
+ +P L+ G V L + G++ SA L ++ +
Sbjct: 587 STIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISIQD 624
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
Score = 388 bits (996), Expect = e-125
Identities = 151/596 (25%), Positives = 252/596 (42%), Gaps = 35/596 (5%)
Query: 24 PPADVKEMFKKY-AEGGTHMTAEQLWQFLVEVQGHGGVSIE-----DAEQIVDQVLQRWH 77
P ++ E+F Y A+ +MT E L +F+ + Q ++ +Q+ + +
Sbjct: 217 PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEP 276
Query: 78 HIARFTRRSLTVEDFHHYLFSTD--LNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQF 135
R L+ E +L + + ++ DMT PL+HYFI + HN+YL QF
Sbjct: 277 SGINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQF 336
Query: 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVL-HGRTLTTPVELIKCLRAIKENAF 194
S S + L G R +ELD W D+ ++ HG T+TT + + + AI E+AF
Sbjct: 337 SGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAIAESAF 396
Query: 195 SASPYPVILTFEDHLN-PHLQAKVAQMITQTFGAMLYSPESECLK-----EFPSPEELKY 248
SPYP+IL+FE+H++ P QAK+A+ FG ML + E PSPE+L+
Sbjct: 397 KTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRG 456
Query: 249 RIIISTKPPKERREKKGINNR-KDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSE 307
+I+I K + + + S V E + +E + ++
Sbjct: 457 KILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEVEEEEEEESGN 516
Query: 308 HNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRI-SLSEQK 366
++ + ++ + T + ++ + + E + Q + I S +E K
Sbjct: 517 LDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKNRSYVISSFTELK 576
Query: 367 FEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLW 426
V + ++ + RIYPK TR++SSNY P + W G QMVALN Q +
Sbjct: 577 AYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQ 636
Query: 427 LMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQM 486
+F N GY+ K F+ D+ F+P + + +
Sbjct: 637 QNMAVFEFNGQSGYLLKHEFMR---RPDKQFNPFSVDRIDVVVATT------LSITVISG 687
Query: 487 DCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV---DNWTPVWDDE-FTF-PLTIPEMALL 541
+ Y V + G+P D K + K ++ PVW +E F F + +PE+A L
Sbjct: 688 QFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASL 747
Query: 542 RVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
RV V + E ++F G +P+ L G H + L L L + E +
Sbjct: 748 RVAVME----EGNKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEMKD 799
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
Score = 383 bits (984), Expect = e-123
Identities = 138/594 (23%), Positives = 238/594 (40%), Gaps = 69/594 (11%)
Query: 24 PPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVS--------IEDAEQIVDQVLQR 75
++++ +FK+ ++ ++T FL ++Q H + E +++
Sbjct: 227 ERSEIEGIFKELSKNKGNITTVMFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESA 286
Query: 76 WHHIARFTRRSLTVEDFHHYLFSTD--LNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGN 133
+ + + LT E ++L + L P + +M L+ Y+I + HN+YL G+
Sbjct: 287 VNKKGK-KKGQLTKEGLLYFLMCEENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGH 345
Query: 134 QFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENA 193
Q + S + L G R +ELD W + + + HG T+ T V + AI E+A
Sbjct: 346 QLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPI-ITHGFTMCTEVLFKDVVYAIAESA 404
Query: 194 FSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECL-----KEFPSPEELKY 248
F S YPVIL+FE+H + Q +AQ + FG +L + P+P +L+
Sbjct: 405 FKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRK 464
Query: 249 RIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEH 308
+I+I K + D+E + E
Sbjct: 465 KILIKNKKMHKGTGD---------------------------------DEELAGLTDEEK 491
Query: 309 NQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFE 368
+ +++ +A A L+ ++ S+ E +
Sbjct: 492 KKIEKEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQKKDRHYEMS-SMVETQAL 550
Query: 369 KAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428
D V + +K I RIYPK TRV+SSNY P I W G Q+VALN Q + ++ +
Sbjct: 551 NKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVN 610
Query: 429 HGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDC 488
G+F N GY+ KP F+ K D+ FDP + V + +
Sbjct: 611 LGVFEYNGCSGYLLKPEFMRKL---DKRFDPFTESTVDGVVAGT------IEIKIISAQF 661
Query: 489 KFWSPPQFYTRVGIAGVPAD--KKMKSTKKKVDNWT-PVWDDEFTFPLTI--PEMALLRV 543
Y V + G+P D +K TK +N P +D++ + P++A++R+
Sbjct: 662 LSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721
Query: 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
V + E +F G +P+ ++PG VPL + LG A + +
Sbjct: 722 IVSE----ENGKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVAKD 771
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
Score = 371 bits (952), Expect = e-118
Identities = 158/638 (24%), Positives = 252/638 (39%), Gaps = 77/638 (12%)
Query: 24 PPADVKEMFKKY-AEGGTHMTAEQLWQFLVEVQGHGGVSIEDAE----QIVDQVLQRWHH 78
D+ ++ + A+G ++T EQL F+ + Q ++ +++++
Sbjct: 221 LRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEP 280
Query: 79 IARFTRRSL-TVEDFHHYLFSTD--LNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQF 135
+F R ++E F YL + + P + DMT PLS YFI + HN+YL Q
Sbjct: 281 NQQFLERDQMSMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQL 340
Query: 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDV-LVLHGRTLTTPVELIKCLRAIKENAF 194
+ S +AL G R +ELD+W ++ + HG T+TT V L L AI E AF
Sbjct: 341 AGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAF 400
Query: 195 SASPYPVILTFEDHLN-PHLQAKVAQMITQTFGAMLYSPESECL-----KEFPSPEELKY 248
SPYPVIL+FE+H++ QAK+A+ FG L + PSP++L
Sbjct: 401 KTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQDLMG 460
Query: 249 RIIISTK-------------------------------------PPKERREKKGINNRKD 271
RI++ K P +
Sbjct: 461 RILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPGLSN 520
Query: 272 ISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAY 331
G K D N+ D + + +E+ + + A
Sbjct: 521 GEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEEEDEEEEEQTDPKKPTTDEGTAS 580
Query: 332 KRL--------IAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQ 383
+ + + +K E + + S E K + + V + +
Sbjct: 581 SEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNK 640
Query: 384 KNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKK 443
+ + RIYPK TRV+SSNY P + W G Q+VALN Q ++ L G+F N GY+ K
Sbjct: 641 QQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLK 700
Query: 444 PNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIA 503
P F+ + D+ FDP ++ V + + Y V +
Sbjct: 701 PEFMRR---PDKSFDPFTEVIVDGIVANA------LRVKVISGQFLSDRKVGIYVEVDMF 751
Query: 504 GVPADKKMKSTKKKVDN--WTPVWDDE-FTFP-LTIPEMALLRVEVRKYSMPEKDEFAGQ 559
G+P D + K + + PVWD+E F FP + +P +A LR+ + E +F G
Sbjct: 752 GLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE----EGGKFVGH 807
Query: 560 TCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597
LPV +R G H V L + + L LL+ E +
Sbjct: 808 RILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTEASD 845
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339 | Back alignment and structure |
|---|
Score = 94.9 bits (235), Expect = 2e-21
Identities = 48/271 (17%), Positives = 73/271 (26%), Gaps = 65/271 (23%)
Query: 93 HHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGV 152
HH+ S+ L P + HN+Y AL G
Sbjct: 6 HHHHHSSGLVP--RGSHMEPAATTYGTSTSVGVHNAY-------EKEKYRYFADALDSGA 56
Query: 153 RVIELDLWPNSAKDDVLVLHG------------------RTLTTPVELIKCLRAIKE-NA 193
++ELDLW N+ V H RT + + CL ++ +
Sbjct: 57 ALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANASELRTKSRDQDFAGCLSDMRAWHD 116
Query: 194 FSASPYPVILTFE--DHLNPHLQAKVAQ---MITQTFGAMLYSP-----------ESECL 237
P++L E D N A+ +I Q G +Y P E+
Sbjct: 117 AHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEAVRA 176
Query: 238 KEFPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGK------EPPDL 291
+PS +L + + P + D+ G + GK P
Sbjct: 177 GGWPSRADLAGKFLFELIPGTVEEKNPFDKLWTDVEYAGHLKDLAAQGKLAQSTAFPAVH 236
Query: 292 TANQADDE---------------RSDYDTSE 307
A D D T
Sbjct: 237 GAAPGDPRERYADPALRPWFVVFDGDAATYL 267
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-07
Identities = 44/366 (12%), Positives = 100/366 (27%), Gaps = 107/366 (29%)
Query: 290 DLTANQADDERSDYDTSEHNQCDE-----DNTEACDR---VTRASGTLAYKRLIAIHNGK 341
+ D + E + D D R + ++ +
Sbjct: 32 NFDCKDVQDMPKSILSKE--EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFV------ 83
Query: 342 LKGCLKEELNLQLEKVRRI----SLSEQKFEKAAVSYGTDVVRFTQKNILRIYP-KQTRV 396
+ L+ + ++ S+ + + + D F + N+ R+ P + R
Sbjct: 84 -EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142
Query: 397 NSSNYKPMIG-WIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQ 455
+P I G + G GK+ W+ A C ++ ++ D +
Sbjct: 143 ALLELRPAKNVLIDG-------VLGSGKT-WV------ALDVCL-----SYKVQCKMDFK 183
Query: 456 VF--------DPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA 507
+F P+ L + + L Q+D + S + + +
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKL-------------LYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 508 DKK----MKSTKKK-----VDNWTPVWD----DEFTFP----LT---------IPEMALL 541
+ +KS + + N V + + F LT +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLN---VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 542 RVEVRKYSMP-EKDE----FAGQTCLPVFQLRP---GIH--AVPLFDRKGEELGSARLLM 591
+ + +SM DE L + + + E + L
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII---AESI--RDGLA 342
Query: 592 RFEFYE 597
++ ++
Sbjct: 343 TWDNWK 348
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 4e-05
Identities = 58/430 (13%), Positives = 122/430 (28%), Gaps = 99/430 (23%)
Query: 38 GGTHMTAEQLWQFLVEVQGHGGV------SIEDAEQIVDQVLQRWHHIARFTRRSLTVED 91
G T + + + V+ + + + E +++ + + + I + T
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI----DPNWTSRS 217
Query: 92 FHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGH-NSYLIGNQFSSDCSDVPITKALKR 150
H N L + A L + N L+ + + A
Sbjct: 218 DHSS------NIKLR---IHSIQAELRRLLKSKPYENCLLV----LLNVQNAKAWNAFNL 264
Query: 151 GVRV--------IELDLWPNSAKDDVLVLHGRTLTTPVE----LIKCLR----AIKENAF 194
++ + L + L H TLT E L+K L +
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD-EVKSLLLKYLDCRPQDLPREVL 323
Query: 195 SASPYPVIL---TFEDHLN-----PHLQAKVAQMITQTFGAMLYSPE-SECLKE---FPS 242
+ +P + + + D L H+ I ++ +L E + FP
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 243 ----PEELKYRIIISTKPPKERRE------KKGINNRKDISAKGKISTEDV---LGKEPP 289
P L +I + K + ++ + IS + L +
Sbjct: 384 SAHIPTIL-LSLIWFDVIKSDVMVVVNKLHKYSLVEKQ--PKESTISIPSIYLELKVKLE 440
Query: 290 DLTAN-----QADDERSDYDTSEHNQCDEDN------------TEACDRVTRASGTLAYK 332
+ A + +D+ + D E +R+T
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 333 RLIA---IHNGKLKGCLKEELNL--QLEKVRR-ISLSEQKFEKAAVSY-------GTDVV 379
R + H+ LN QL+ + I ++ K+E+ + +++
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560
Query: 380 RFTQKNILRI 389
++LRI
Sbjct: 561 CSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 3e-04
Identities = 73/488 (14%), Positives = 132/488 (27%), Gaps = 140/488 (28%)
Query: 201 VILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRIIISTKPPKER 260
++ FED + K Q + + ++L E + + R+ + +E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPK---SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 261 REKKGINN--RKDIS-AKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTE 317
+K + R + I TE Q Y + ++ DN
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQ-----------RQPSMMTRMY-IEQRDRLYNDNQV 125
Query: 318 ACDR-VTRASGTLAYKR---------LIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKF 367
V+R L ++ + I G + G K + L + ++ + K
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLID-G-VLGSGKTWVALDVCLSYKV---QCKM 180
Query: 368 EKAA--VSYG-----TDVVRFTQKNILRIYPKQTRV--NSSNYKPMIGWIHGAQMVALNM 418
+ ++ V+ QK + +I P T +SSN K I I L
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 419 QGYGKSL---------WLMHGMFRANAGC---------------GYVKKPNFLLKEGPDD 454
+ Y L + N C + L
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAF---NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM- 296
Query: 455 QVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMD-----CKFWSP---------------- 493
P E +L +K YLD + D +P
Sbjct: 297 -TLTPDEVK----SLLLK-------YLDCRPQDLPREVLTT-NPRRLSIIAESIRDGLAT 343
Query: 494 PQFYTRVGIAGVPADKKMKSTKKKVDNWTP-----VWDDEFTFP--LTIPEMALLRV--- 543
+ V DK + ++ P ++D FP IP + L +
Sbjct: 344 WDNWKHVNC-----DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 544 -----------EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGS--ARLL 590
++ KYS+ EK +P L K E + ++
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE--------LKVKLENEYALHRSIV 450
Query: 591 MRFEFYEA 598
+ +
Sbjct: 451 DHYNIPKT 458
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-07
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 506 PADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVF 565
K T+ ++ PVW++ F F L + +L + + + DE G V
Sbjct: 37 TTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY-VMDETLGTATFTVS 95
Query: 566 QLRPGI---HAVPLFDRKGEEL 584
++ G L
Sbjct: 96 SMKVGEKKEVPFIFNQVTEMVL 117
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 9e-06
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL---LRVEVRKYSMPEKDEFAGQTCLPV 564
D+K K TKK + PVW++ F L + L + V+ + +++ G + +
Sbjct: 37 DEKKK-TKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVAL 95
Query: 565 FQLRPG------IHAVPLFDRKGEELGSARLLMRFEF 595
L + L + KG++ G A + + +
Sbjct: 96 KDLTGDQSRSLPYKLISLLNEKGQDTG-ATIDLVIGY 131
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-05
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 508 DKKMKS-TKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQ 566
+ ++++ T K N P W+ FTFP+ +L V V + +F G+ +P+
Sbjct: 44 NDRLQTHTVYK--NLNPEWNKVFTFPIKDIH-DVLEVTVFDEDGDKPPDFLGKVAIPLLS 100
Query: 567 LRPGI-HAVPLFDRKGEELGSARLLMRFEF 595
+R G + L ++ E+ + + +
Sbjct: 101 IRDGQPNCYVLKNKDLEQAFKGVIYLEMDL 130
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 5e-05
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQL 567
D ++ T K +P W DEF + + + V + D+F + +L
Sbjct: 48 DSRIGQTATKQKTNSPAWHDEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEEL 105
Query: 568 RPG 570
Sbjct: 106 LQN 108
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 6e-05
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQL 567
++ T K P +++EF + + L + V + D F L +L
Sbjct: 70 QVRVGQTSTKQKTNKPTYNEEFCAN--VTDGGHLELAVFHETPLGYDHFVANCTLQFQEL 127
Query: 568 RPGIHAVPLFDR 579
A F+
Sbjct: 128 LRTTGASDTFEG 139
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-05
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLP---V 564
+ KS + TP W++ F F ++ L+ ++ + +D+ G+ +P V
Sbjct: 41 TQDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPV 99
Query: 565 FQLRPGIHAVPLFDRKGEELGSARLLMRF 593
F + E G + + F
Sbjct: 100 FVEGSIPPTAYNVVKDEEYKGEIWVALSF 128
|
| >2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* Length = 274 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 21/149 (14%)
Query: 116 PLSHYFIYTGHNSYLIGNQFSS-------DCSDVPITKALKRGVRVIELDLWPNSAKDDV 168
L+ I H++ + + + + L+ G+R +D+ D++
Sbjct: 15 NLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRY--IDIRAK---DNL 69
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYP---VILTFEDHLNPHL-QAKVAQMITQT 224
+ HG L L I + F P +I+ +D N + Q +
Sbjct: 70 NIYHGPIFLN-ASLSGVLETITQ--FLKK-NPKETIIMRLKDEQNSNDSFDYRIQPLINI 125
Query: 225 FGAMLYSPESECLK-EFPSPEELKYRIII 252
+ Y+ + P+ ++++ +I++
Sbjct: 126 YKDYFYTTPRTDTSNKIPTLKDVRGKILL 154
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 497 YTRVGIAGVPADKKMK---STKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEK 553
Y RV + + T KK N P W++E F + P+ + EV + +
Sbjct: 32 YVRVTLYDPMSGILTSVQTKTIKKSLN--PKWNEEILFRVL-PQRHRILFEVFDENRLTR 88
Query: 554 DEFAGQTCLPVFQLRPG 570
D+F GQ +P++ L
Sbjct: 89 DDFLGQVDVPLYPLPTE 105
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQL 567
D + K T+K + +P W T + ++ L V + + D G L +++
Sbjct: 66 DGQSKKTEKCNNTNSPKWKQPLTVI--VTPVSKLHFRVWSHQTLKSDVLLGTAALDIYET 123
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 509 KKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPV 564
+ +KST V P W+ +F F + ++ L VEV + D G +P+
Sbjct: 32 QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLT-VEVWNKGLI-WDTMVGTVWIPL 85
|
| >3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 3v18_A 3v16_A* Length = 306 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 3e-04
Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 15/148 (10%)
Query: 116 PLSHYFIYTGHNSYLIGNQFS-----SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLV 170
L+ I H+S + + D +K GVR D+ ++ D+++
Sbjct: 18 HLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRF--FDIRGRASADNMIS 75
Query: 171 LHGRTLTTPVELIKCLRAIKENAF-SASPYPVILTFEDHLNP---HLQAKVAQMITQTFG 226
+H + EL K L K + SA P I+ + ++ + +
Sbjct: 76 VHHGMVYLHHELGKFLDDAKY--YLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYY 133
Query: 227 AMLYSPESECLKEFPSP--EELKYRIII 252
+P +E K +I++
Sbjct: 134 NNPQYQNLFYTGSNANPTLKETKGKIVL 161
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 9e-04
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 499 RVGIAGVPADKKMKS-TKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFA 557
+ +++ T KK N P W++E F + P+ L EV + +D+F
Sbjct: 48 TLYDPMNGVLTSVQTKTIKKSLN--PKWNEEILFRVH-PQQHRLLFEVFDENRLTRDDFL 104
Query: 558 GQTCLPVFQLRPG 570
GQ +P++ L
Sbjct: 105 GQVDVPLYPLPTE 117
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 602 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 100.0 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 100.0 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 100.0 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 100.0 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 99.94 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 99.7 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 99.68 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 99.68 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 99.67 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 99.66 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 99.66 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 99.62 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 99.6 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 99.6 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 99.59 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 99.59 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 99.57 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 99.57 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 99.56 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 99.56 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 99.56 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 99.55 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 99.55 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 99.55 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 99.55 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 99.55 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 99.55 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 99.55 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 99.54 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 99.54 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 99.54 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 99.53 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 99.53 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 99.52 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 99.51 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 99.51 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 99.51 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 99.48 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.46 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 99.43 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 99.4 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.38 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.37 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 99.36 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 99.34 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 99.3 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 99.27 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.22 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 99.13 | |
| 2plc_A | 274 | PI-PLC, phosphatidylinositol-specific phospholipas | 98.95 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.92 | |
| 3ea1_A | 298 | 1-phosphatidylinositol phosphodiesterase; phosphat | 97.47 | |
| 3v1h_A | 306 | 1-phosphatidylinositol phosphodiesterase; PI-catio | 97.44 | |
| 1yrk_A | 126 | NPKC-delta, protein kinase C, delta type; C2 domai | 97.34 | |
| 2enj_A | 138 | NPKC-theta, protein kinase C theta type; beta-sand | 97.08 | |
| 3no3_A | 238 | Glycerophosphodiester phosphodiesterase; structura | 96.5 | |
| 3qvq_A | 252 | Phosphodiesterase OLEI02445; structural genomics, | 96.49 | |
| 1vd6_A | 224 | Glycerophosphoryl diester phosphodiesterase; glyce | 96.43 | |
| 2otd_A | 247 | Glycerophosphodiester phosphodiesterase; structura | 96.19 | |
| 3ks6_A | 250 | Glycerophosphoryl diester phosphodiesterase; struc | 96.04 | |
| 1o1z_A | 234 | GDPD, glycerophosphodiester phosphodiesterase; TM1 | 96.01 | |
| 2o55_A | 258 | Putative glycerophosphodiester phosphodiesterase; | 95.95 | |
| 3i10_A | 278 | Putative glycerophosphoryl diester phosphodiester; | 95.85 | |
| 2pz0_A | 252 | Glycerophosphoryl diester phosphodiesterase; glyce | 95.71 | |
| 3ch0_A | 272 | Glycerophosphodiester phosphodiesterase; YP_677622 | 95.5 | |
| 3l12_A | 313 | Putative glycerophosphoryl diester phosphodiester; | 95.34 | |
| 3mz2_A | 292 | Glycerophosphoryl diester phosphodiesterase; struc | 95.32 | |
| 3hhm_A | 1091 | Phosphatidylinositol-4,5-bisphosphate 3-kinase cat | 94.76 | |
| 1zcc_A | 248 | Glycerophosphodiester phosphodiesterase; NYSGXRC, | 94.07 | |
| 2wxf_A | 940 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 93.69 | |
| 1xx1_A | 285 | Smase I, sphingomyelinase I; structure, quick cryo | 93.17 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 93.07 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 92.98 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 92.97 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 92.83 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 92.73 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 92.44 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 92.27 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 91.98 | |
| 1ydy_A | 356 | Glycerophosphoryl diester phosphodiesterase; struc | 91.94 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 91.92 | |
| 2oog_A | 287 | Glycerophosphoryl diester phosphodiesterase; phosp | 91.63 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 91.53 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 91.5 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 91.46 | |
| 2y3a_A | 1092 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 91.28 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 91.26 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 91.14 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 90.76 | |
| 1e7u_A | 961 | Phosphatidylinositol 3-kinase catalytic subunit; p | 90.35 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 89.95 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 89.77 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 89.56 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 89.05 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 88.99 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 88.81 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 88.78 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 88.75 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 88.62 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 88.58 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 88.5 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 88.1 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 88.0 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 87.97 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 87.8 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 87.55 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 87.54 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 87.34 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 87.23 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 87.15 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 87.14 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 87.02 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 86.89 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 86.88 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 86.88 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 86.86 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 86.82 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 86.62 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 86.58 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 86.55 | |
| 3l4c_A | 220 | Dedicator of cytokinesis protein 1; DOCK180, DOCK1 | 86.48 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 86.45 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 86.31 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 86.12 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 86.0 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 85.97 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 85.86 | |
| 1pul_A | 125 | Hypothetical protein C32E8.3 in chromosome I; alph | 85.84 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 85.81 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 85.66 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 85.58 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 85.54 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 85.5 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 85.43 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 85.27 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 85.23 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 85.03 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 84.96 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 84.92 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 84.56 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 84.44 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 84.36 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 84.17 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 84.07 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 83.87 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 83.59 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 83.52 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 83.45 | |
| 1psr_A | 100 | Psoriasin, S100A7; EF-hand protein, MAD phasing, p | 83.29 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 83.13 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 83.05 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 82.98 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 82.93 | |
| 3rlg_A | 302 | Sphingomyelin phosphodiesterase D lisictox-alphai; | 82.82 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 82.75 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 82.64 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 82.17 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 81.71 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 81.57 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 81.52 | |
| 2jrf_A | 184 | Tubulin polymerization-promoting protein family me | 81.51 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 81.41 | |
| 1wlm_A | 151 | Protein CGI-38; structural genomics, NPPSFA, natio | 81.35 | |
| 1qls_A | 99 | S100C protein, calgizzarin; metal-binding protein/ | 81.25 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 81.19 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 81.15 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 80.97 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 80.75 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 80.28 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 80.26 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 80.25 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 80.21 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-148 Score=1257.97 Aligned_cols=538 Identities=29% Similarity=0.450 Sum_probs=449.4
Q ss_pred CchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCCC
Q 007473 24 PPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNP 103 (602)
Q Consensus 24 ~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n~ 103 (602)
.|+||..+|+.|..+...|+.++|++||.++|++..++.++|.+||++|..... ..+.+.|++++|.+||+|. .|.
T Consensus 78 ~~~el~~aF~~fD~~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~---~~~dG~Is~deF~~~L~s~-~~~ 153 (624)
T 1djx_A 78 QRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET---AKAQRQMTKDGFLMYLLSA-DGN 153 (624)
T ss_dssp CCHHHHHHHHHHHTTSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHH---HHHTTEECHHHHHHHHHST-TTB
T ss_pred cHHHHHHHHHHhcCCCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChh---hccCCCCCHHHHHHHhcCc-ccc
Confidence 478999999999877889999999999999999976899999999999973210 1134689999999999986 466
Q ss_pred CC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccc
Q 007473 104 PL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPV 180 (602)
Q Consensus 104 ~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i 180 (602)
++ +..|+|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++|||||||||||+|
T Consensus 154 ~~~p~~~~v~~dm~~pLs~Yfi~SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlts~i 232 (624)
T 1djx_A 154 AFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKI 232 (624)
T ss_dssp SBCGGGGSCCSCTTSCGGGEEECEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEECCTTSCCCCE
T ss_pred ccCcccccccccccCcchhheeecccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEecCCcccccc
Confidence 55 56799999999999999999999999999999999999999999999999999999977 579999999999999
Q ss_pred hHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCc
Q 007473 181 ELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKE 259 (602)
Q Consensus 181 ~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~ 259 (602)
+|+|||+||++|||++|+||||||||||||++||.+||+||++||||+|++++.+ ....||||++||||||||+|+++.
T Consensus 233 ~f~~v~~~I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik~k~~~~ 312 (624)
T 1djx_A 233 LFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGG 312 (624)
T ss_dssp EHHHHHHHHHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEEECCC--
T ss_pred cHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEEecCCCc
Confidence 9999999999999999999999999999999999999999999999999998744 468999999999999999999864
Q ss_pred cccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEec
Q 007473 260 RREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHN 339 (602)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~ 339 (602)
..+...... .++. + ..++++. .+. +.. ..........++...+++++|++|++|+.
T Consensus 313 ~~~~~~~~~----------~~~~----~-------~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~i~~~ls~l~~y~~ 368 (624)
T 1djx_A 313 LLPAGGENG----------SEAT----D-------VSDEVEA-AEM-EDE-AVRSQVQHKPKEDKLKLVPELSDMIIYCK 368 (624)
T ss_dssp ------------------------------------------------------------------CCCHHHHTTEEEEE
T ss_pred ccccccccC----------cccc----c-------CCccccc-ccc-ccc-ccccccccccccccccccHHHhhhhhhhc
Confidence 332211000 0000 0 0000000 000 000 00000001112234578899999999998
Q ss_pred ccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeecccc
Q 007473 340 GKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQ 419 (602)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~Q 419 (602)
+.++++|..........++++||||+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Q 448 (624)
T 1djx_A 369 SVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ 448 (624)
T ss_dssp EECCCCCCSSSSSSCCTTEEEEEEHHHHHHHHHHHHHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTT
T ss_pred CccCCCcchhhhcCCccceEeeccHHHHHHHHHHhHHHHHHHhhhcceeeccCCccCCCCCCCchHHhhccceeeeeccc
Confidence 88888777654332114789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCC--C--cceeEEEEEEeccCcccCccCcCCCCCCCCC
Q 007473 420 GYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKL--P--VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQ 495 (602)
Q Consensus 420 T~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~--p--~~~~L~V~Visa~~L~~~~~~~~~d~~s~~D 495 (602)
|+|++||||+|||+.||+|||||||++||+.. ..|+|.... + ...+|+|+|++|++|+... ....+.+|
T Consensus 449 t~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~d----~~~~~~~D 521 (624)
T 1djx_A 449 TPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPN---TTFNSRALTQGPWWRPERLRVRIISGQQLPKVN----KNKNSIVD 521 (624)
T ss_dssp CCSHHHHHHHHHHHSGGGCSEEECCGGGGCTT---CCCCTTSCCSSTTCCCEEEEEEEEEEESCCCCS----SCSSSCCC
T ss_pred CCchHHhHHHHHhhcCCCCccEECCHHHcCCC---CCcCcccccccCCccceEEEEEEEEcCCCCccc----ccccCCCC
Confidence 99999999999999999999999999999874 358886543 2 4578999999999997531 11246789
Q ss_pred ceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEE
Q 007473 496 FYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV 574 (602)
Q Consensus 496 pyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i 574 (602)
|||+|.+.|.+.|..++||+++++| +||+|||+|+|.+..|++++|+|.|||+|..+++++||++++||.+|++|||||
T Consensus 522 PYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~r~v 601 (624)
T 1djx_A 522 PKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHV 601 (624)
T ss_dssp EEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEEEEE
T ss_pred cEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCcEEE
Confidence 9999999998888888999999998 999999999999999999999999999998888999999999999999999999
Q ss_pred EccCCCCCccCCeEEEEEEEEEE
Q 007473 575 PLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 575 pL~d~~g~~l~~asL~v~i~~~e 597 (602)
||+|.+|+++.+++|||+|++.+
T Consensus 602 ~L~d~~g~~~~~~~L~v~i~~~~ 624 (624)
T 1djx_A 602 HLLSKNGDQHPSATLFVKISIQD 624 (624)
T ss_dssp EEECTTSCEEEEEEEEEEEEEEC
T ss_pred eCCCCCcCCCCceEEEEEEEEEC
Confidence 99999999999999999999863
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-147 Score=1268.69 Aligned_cols=518 Identities=27% Similarity=0.419 Sum_probs=441.2
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCC--------CCHHHHHHHHHHHhh--hccccccccCCCcCHHH
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGG--------VSIEDAEQIVDQVLQ--RWHHIARFTRRSLTVED 91 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~--~~~~~~~~~~~~l~~~g 91 (602)
+.|+||++||+.|+++ ...||. +|++||+++|++.. ++.++|.+||++|+. ... ....+.|+++|
T Consensus 226 ~~R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~---~~~~g~Lsldg 301 (816)
T 3qr0_A 226 LERSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKK---GKKKGQLTKEG 301 (816)
T ss_dssp CCCTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGG---GCBTTEECHHH
T ss_pred CCHHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchh---hhccCCccHHH
Confidence 5799999999999976 479999 99999999998863 678999999999985 211 11346799999
Q ss_pred HHHHhcCCCCCCCC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 007473 92 FHHYLFSTDLNPPL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDV 168 (602)
Q Consensus 92 F~~~L~S~~~n~~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~p 168 (602)
|++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|
T Consensus 302 F~~yL~S~-~~~~~~~~~~~v~~dm~~Pl~~YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~-~eP 379 (816)
T 3qr0_A 302 LLYFLMCE-ENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKD-GEP 379 (816)
T ss_dssp HHHHHHSG-GGCSSCHHHHSSCSCCCSCGGGEEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTT-SSC
T ss_pred HHHHhhcc-cccccchhhcccccccCCchhhheecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCC-CCc
Confidence 99999986 46666 56799999999999999999999999999999999999999999999999999999987 579
Q ss_pred eEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCCh
Q 007473 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSP 243 (602)
Q Consensus 169 iv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP 243 (602)
||||||||||+|+|+|||+||++|||++|+||||||||||||++||.+||+||++||||+|++++.+. ...||||
T Consensus 380 vv~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP 459 (816)
T 3qr0_A 380 IITHGFTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTP 459 (816)
T ss_dssp EECCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSTTCCCCCT
T ss_pred eEccCCcccccccHHHHHHHHHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhhhccCCccccccccCCcCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999976432 2689999
Q ss_pred hhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhcccc
Q 007473 244 EELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVT 323 (602)
Q Consensus 244 ~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (602)
++||||||||+|+++..... ++++.+. ++++ ++ . ...........+.
T Consensus 460 ~~Lk~kIlik~K~~~~~~~~---------------~~~~~~~------------~~~~-~~---~--~~~~~~~~~~~~~ 506 (816)
T 3qr0_A 460 YDLRKKILIKNKKMHKGTGD---------------DEELAGL------------TDEE-KK---K--IEKEKKDAGTAAK 506 (816)
T ss_dssp TTTTTCEEEECCCCC-------------------------CC------------CHHH-HH---H--HHHHHHHHGGGGS
T ss_pred HHHcCCEEEEeCCCCCcCCC---------------ccccccc------------ccch-hh---c--ccccccccccccc
Confidence 99999999999987531100 0000000 0000 00 0 0000000111122
Q ss_pred ccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCC
Q 007473 324 RASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKP 403 (602)
Q Consensus 324 ~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P 403 (602)
..+++++|++|++|+.+..+.+|....... ..++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||
T Consensus 507 ~~~i~~eLs~Lv~y~~~v~f~~f~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P 585 (816)
T 3qr0_A 507 EAEAAEEMSALVNYIQPVHFTTFEQAQKKD-RHYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVP 585 (816)
T ss_dssp CCCCCHHHHTTCSSSEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHCHHHHHHHTTTSCEEEECCTTCTTCCCCCT
T ss_pred hhhhHHHHHHHHhhhCCcCCCCcccchhcC-CcceEecccHHHHHHHHHhhhHHHHHhhhcccceeCCCccccCCCCCCc
Confidence 346789999999998777777777654433 3457899999999999999999999999999999999999999999999
Q ss_pred cccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCC----cceeEEEEEEeccCc
Q 007473 404 MIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLP----VKKTLKVKAYMGDGW 479 (602)
Q Consensus 404 ~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p----~~~~L~V~Visa~~L 479 (602)
++||++|||||||||||+|++||||+|||+.||+|||||||++||+.. ..|||....+ .+.+|+|+|++|++|
T Consensus 586 ~~~W~~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L 662 (816)
T 3qr0_A 586 QIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLD---KRFDPFTESTVDGVVAGTIEIKIISAQFL 662 (816)
T ss_dssp HHHHTTTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCHHHHCTT---CCCCTTCCSCCTTSCCEEEEEEEEEEECC
T ss_pred hhhcccCceEEeecCcCCChhhhhhhhhhccCCceeeeecChHhcCCC---cccCCCCCCCcCCccceEEEEEEEEcccC
Confidence 999999999999999999999999999999999999999999999864 4799876443 247899999999999
Q ss_pred ccCccCcCCCCCCCCCceEEEEEecCCCCc--ccccccCCCCC-CCCeeccE-EEEE-eecCCccEEEEEEEecCCCCCC
Q 007473 480 YLDFKQMDCKFWSPPQFYTRVGIAGVPADK--KMKSTKKKVDN-WTPVWDDE-FTFP-LTIPEMALLRVEVRKYSMPEKD 554 (602)
Q Consensus 480 ~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~--~k~kTkvi~nn-~nPvWNEt-f~F~-v~~pela~Lrf~V~D~d~~~~d 554 (602)
+. ..+||||+|.+.|.|.|. .++||+++++| +||+|||+ |+|. |..|++++|+|.|||++ +
T Consensus 663 ~~----------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----d 728 (816)
T 3qr0_A 663 SD----------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----G 728 (816)
T ss_dssp CS----------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----S
T ss_pred CC----------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----C
Confidence 52 136999999999988877 67799999876 99999998 9998 88999999999999975 7
Q ss_pred CccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 555 EFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 555 d~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
+|||++++||++|++|||||||+|..|+++..++|||+|.+.+
T Consensus 729 dfiG~~~ipL~~L~~GyR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 729 KFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp CEEEEEEEESTTCCCEEEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CeeeEEEEEHHHcCCcceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 9999999999999999999999999999999999999999986
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-146 Score=1267.02 Aligned_cols=547 Identities=28% Similarity=0.419 Sum_probs=425.3
Q ss_pred CCchhHHHHHHHhh-CCCCccCHHHHHHHHHHHhCCCC--------CCHHHHHHHHHHHhhhccccccccCCCcCHHHHH
Q 007473 23 GPPADVKEMFKKYA-EGGTHMTAEQLWQFLVEVQGHGG--------VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFH 93 (602)
Q Consensus 23 ~~r~el~~if~~~~-~~~~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~ 93 (602)
..|+||..+|..|. ++...||.++|++||++.|++.. ++.++|++||++|+... ...+.+.|++++|.
T Consensus 216 ~~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~---~~~~dg~is~eeF~ 292 (799)
T 2zkm_X 216 CPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSG---INAQRGQLSPEGMV 292 (799)
T ss_dssp SCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC-----------CCHHHHH
T ss_pred cCHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhccc---ccccCCccchhhhh
Confidence 35899999999995 45689999999999999999863 67788999999997321 11235789999999
Q ss_pred HHhcCCCCCCCC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC--CCCCc
Q 007473 94 HYLFSTDLNPPL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS--AKDDV 168 (602)
Q Consensus 94 ~~L~S~~~n~~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~--~~~~p 168 (602)
+||+|. .|.++ +..|+|||++||||||||||||||||||||.|+||+|||++||++||||||||||||+ + ++|
T Consensus 293 ~~L~S~-~n~~~~~~~~~v~~dm~~PLshYfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~-~ep 370 (799)
T 2zkm_X 293 WFLCGP-ENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPD-EEP 370 (799)
T ss_dssp HHHHST-TSCSBCGGGGSSCSCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTC-CSC
T ss_pred hcccCc-cccccchhhcccccccCCchhhheEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCC-CCC
Confidence 999985 57766 5679999999999999999999999999999999999999999999999999999997 4 579
Q ss_pred eEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCC
Q 007473 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPS 242 (602)
Q Consensus 169 iv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPS 242 (602)
||||||||||+|+|+|||+||++|||++|+||||||||||| |++||.+||+||++||||+|++++.+. ...|||
T Consensus 371 ~v~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lPS 450 (799)
T 2zkm_X 371 IITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPS 450 (799)
T ss_dssp EECCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCC
T ss_pred EEEeCCcccccccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhhheecCCccccccccCCCCCC
Confidence 99999999999999999999999999999999999999999 999999999999999999999977542 378999
Q ss_pred hhhccccEEEecCCCCccccccccCc-cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcch-----
Q 007473 243 PEELKYRIIISTKPPKERREKKGINN-RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNT----- 316 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 316 (602)
|++||||||||+|+++...+...... ..+.......+....|+.+...-.. ..++++++++. .. ..+++.
T Consensus 451 P~~Lk~kIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~-~~~~~~~~~~~ 526 (799)
T 2zkm_X 451 PEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELE-EEEVEEEEEEE--SG-NLDEEEIKKMQ 526 (799)
T ss_dssp TTTTTTCEEEECCCC------------------------------------------------------CCSHHHHHHHH
T ss_pred HHHHCCCEEEEecCCCcccccccccccccccccccccCccccccCccccccc-ccccccccccc--cc-ccchhhhhccc
Confidence 99999999999999764321110000 0000000000111122211110000 00000000000 00 000000
Q ss_pred -hhhccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcC
Q 007473 317 -EACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTR 395 (602)
Q Consensus 317 -~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~R 395 (602)
.+...+....++++|++|++|+.+..+.+|....+.. ..++|+||+|+++.+++++++.+|++||++||+||||+|+|
T Consensus 527 ~~~~~~~~~~~~~~els~Lv~y~~~~~f~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R 605 (799)
T 2zkm_X 527 SDEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTR 605 (799)
T ss_dssp HTTGGGGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTC
T ss_pred ccccccccccchhhhhcceeEEecCcCCCchhhhhhcC-CccceecCCHHHHHHHHHHCHHHHHHHhhhcceeeccCCCc
Confidence 0011112345778999999987766667787765543 35679999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCC----CcceeEEE
Q 007473 396 VNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKL----PVKKTLKV 471 (602)
Q Consensus 396 idSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V 471 (602)
||||||||++||++|||||||||||+|++||||+|||+.||+|||||||++||+.. ..|||.... .+.++|+|
T Consensus 606 ~~SSN~~P~~~W~~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V 682 (799)
T 2zkm_X 606 MDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPD---KQFNPFSVDRIDVVVATTLSI 682 (799)
T ss_dssp TTCCCCCSHHHHHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTCTT---SCCCTTSCCTTTTTTCEEEEE
T ss_pred CCCCCCCcHHHHhccceEeeeccccCchHHHHHHhhhhccCCCCceECCHHHhCCC---ccCCCcccccccceeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999864 468987533 24678999
Q ss_pred EEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-ccccc-CCCCC-CCCeecc-EEEE-EeecCCccEEEEEEE
Q 007473 472 KAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-MKSTK-KKVDN-WTPVWDD-EFTF-PLTIPEMALLRVEVR 546 (602)
Q Consensus 472 ~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k~kTk-vi~nn-~nPvWNE-tf~F-~v~~pela~Lrf~V~ 546 (602)
+|++|++|+. ..+||||+|.+.|.|.|.. ++||+ ++++| +||+||| +|+| .|..|++++|+|.|+
T Consensus 683 ~Visa~~L~~----------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 683 TVISGQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp EEEEEESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred EEEeccccCc----------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 9999999962 2379999999999887764 67999 88765 8999999 7999 899999999999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|+| +++||++++||++|++|||||||+|..|+++.+++|||+|++.
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EeC----CCccceEeeehhhcCCCcEEEeccCCCCCCCCceEEEEEEEEE
Confidence 986 7999999999999999999999999999999999999999986
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-144 Score=1251.32 Aligned_cols=554 Identities=29% Similarity=0.438 Sum_probs=439.6
Q ss_pred CCCchhHHHHHHHhh-CCCCccCHHHHHHHHHHHhCCC--------CCCHHHHHHHHHHHhhhccccccccCCCcCHHHH
Q 007473 22 AGPPADVKEMFKKYA-EGGTHMTAEQLWQFLVEVQGHG--------GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDF 92 (602)
Q Consensus 22 ~~~r~el~~if~~~~-~~~~~l~~~~~~~Fl~~~Q~~~--------~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF 92 (602)
++.|+||+.||..|. +++..||+++|++||+++|++. .++.++|.+||++|+.... ...++.|+++||
T Consensus 219 l~~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~---~~~~g~LsldgF 295 (885)
T 3ohm_B 219 LCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQ---FLERDQMSMEGF 295 (885)
T ss_dssp HSCCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHH---HHHTTEECHHHH
T ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChh---hhccCccchhhh
Confidence 356999999999995 4568999999999999999985 2678999999999984311 123568999999
Q ss_pred HHHhcCCCCCCCC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCc
Q 007473 93 HHYLFSTDLNPPL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDV 168 (602)
Q Consensus 93 ~~~L~S~~~n~~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~p 168 (602)
++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +.++|
T Consensus 296 ~~yL~S~-~~~~~~~~~~~v~~dm~~Pls~YfI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep 374 (885)
T 3ohm_B 296 SRYLGGE-ENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEP 374 (885)
T ss_dssp HHHHTST-TSCSSCHHHHSSCSCCCSCGGGEEECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCC
T ss_pred hhhccCc-ccCccCccccccccccCcchhhheeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCC
Confidence 9999985 56666 5679999999999999999999999999999999999999999999999999999993 23689
Q ss_pred eEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCC
Q 007473 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPS 242 (602)
Q Consensus 169 iv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPS 242 (602)
||||||||||+|+|+|||+||++|||++|+||||||||||| |++||.+||+||++||||+|++++.+. ...|||
T Consensus 375 ~v~hg~t~t~~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~~L~~~~~~~~~~~~~~~lps 454 (885)
T 3ohm_B 375 FITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPS 454 (885)
T ss_dssp EECSTTSEECCEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGGGBCCSCBTTBCSSSSCCCCC
T ss_pred EEeeCCcccCcccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhHhhccCcccccccccCCcCCC
Confidence 99999999999999999999999999999999999999999 899999999999999999999976432 368999
Q ss_pred hhhccccEEEecCCCCcccccc-c--cCcc--cccccc-CCC-------C--------ccc-cc--CCCCCC------CC
Q 007473 243 PEELKYRIIISTKPPKERREKK-G--INNR--KDISAK-GKI-------S--------TED-VL--GKEPPD------LT 292 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~~~~~-~--~~~~--~~~~~~-~~~-------~--------~~~-~~--~~~~~~------~~ 292 (602)
|++||||||||+|+++...... . ...+ +..... ... + .+. .+ |..... ..
T Consensus 455 p~~Lk~kilik~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 534 (885)
T 3ohm_B 455 PQDLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQ 534 (885)
T ss_dssp TTTTTTCEEEECCCCC----------------------------------------------------------------
T ss_pred HHHHcCcEEEEecCCCccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccc
Confidence 9999999999999976421000 0 0000 000000 000 0 000 00 000000 00
Q ss_pred CCcCCC----CC----CccccCcCCCCCCcchhh--------hccccccccccccccceEEecccccCchhHHhhhcccc
Q 007473 293 ANQADD----ER----SDYDTSEHNQCDEDNTEA--------CDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEK 356 (602)
Q Consensus 293 ~~~~~~----~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 356 (602)
...... +. +.+...+..+.++++..+ ...+....++++|++|++|+.+..+.+|...... ...
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~eLS~LvvY~~~vkf~~f~~~~~~-~~~ 613 (885)
T 3ohm_B 535 KSLGDEGLNRGPYVLGPADREDEEEDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKR-NKC 613 (885)
T ss_dssp ---------------------------------------CTTGGGTTCCCCCHHHHTTCSSCEECCCCCHHHHHHH-TCT
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccchhhHHHHhHHhhhcCccCCCccccccc-CCc
Confidence 000000 00 000000000000000000 0011223578899999998877777777654432 346
Q ss_pred eEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeeecccccccc
Q 007473 357 VRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANA 436 (602)
Q Consensus 357 ~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG 436 (602)
++|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.||
T Consensus 614 ~~~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~QT~d~~m~lN~g~F~~nG 693 (885)
T 3ohm_B 614 FEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNG 693 (885)
T ss_dssp TEEEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHHTTGG
T ss_pred ceECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccCCCCCCchhhcccCceeeeecCCCCCcccchhhhhhccCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeecCCccCCCCCCCCcCCCCCCC----CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-c
Q 007473 437 GCGYVKKPNFLLKEGPDDQVFDPKEKL----PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-M 511 (602)
Q Consensus 437 ~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k 511 (602)
+|||||||++||+.. ..|||.... +++.+|+|+|++|++|+. ..+||||+|.+.|.|.|.. +
T Consensus 694 ~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~----------~~~DPYV~V~l~g~p~D~~~k 760 (885)
T 3ohm_B 694 RSGYLLKPEFMRRPD---KSFDPFTEVIVDGIVANALRVKVISGQFLSD----------RKVGIYVEVDMFGLPVDTRRK 760 (885)
T ss_dssp GCSEEECCGGGTCTT---CCCCTTCSSCCTTCCCEEEEEEEEEEESCCS----------SCCCEEEEEEEESSTTTCBCC
T ss_pred ceeeeecCHHHcCCC---cCcCCCcCcccCcccceEEEEEEEEeccCcc----------cCCCcEEEEEEeCCCcccccc
Confidence 999999999999864 469987532 245689999999999962 1379999999999888864 5
Q ss_pred ccccCCCCC-CCCeecc-EEEEE-eecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeE
Q 007473 512 KSTKKKVDN-WTPVWDD-EFTFP-LTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSAR 588 (602)
Q Consensus 512 ~kTkvi~nn-~nPvWNE-tf~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~as 588 (602)
+||+++++| +||+||| +|.|. |..|++++|+|.|||+| ++|||++++||++|++|||||||+|..|+++..++
T Consensus 761 ~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~GyR~vpL~~~~g~~l~~at 836 (885)
T 3ohm_B 761 YRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPA 836 (885)
T ss_dssp CCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCCEEEEEEEECTTSCEEEEEE
T ss_pred eeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCCCceEEEecCCCCCccCceE
Confidence 799999876 9999999 69998 88999999999999987 79999999999999999999999999999999999
Q ss_pred EEEEEEEEE
Q 007473 589 LLMRFEFYE 597 (602)
Q Consensus 589 L~v~i~~~e 597 (602)
|||+|++.+
T Consensus 837 Lfv~i~~~~ 845 (885)
T 3ohm_B 837 LLIYTEASD 845 (885)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999986
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-28 Score=244.56 Aligned_cols=138 Identities=21% Similarity=0.336 Sum_probs=119.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc-------------
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL------------- 176 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl------------- 176 (602)
...+++||+||+|..+||||++|+ ...+++||.+|||+||||||+++.++...|+||.++
T Consensus 21 ~~~~~~pls~~T~~g~HNSY~~g~-------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~as~~~ 93 (339)
T 3h4x_A 21 MEPAATTYGTSTSVGVHNAYEKEK-------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANAS 93 (339)
T ss_dssp ----CCBTTSEEEEEETTTTCTTT-------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCSSGG
T ss_pred CCcccCccccceEeeccccccccC-------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccccccccccccccc
Confidence 457899999999999999999997 356789999999999999999876677999999875
Q ss_pred -----cccchHHHHHHHHhhcc-cccCCCceEEEecCCCCHHHH-----HHHHHHHHHHhhcccCCCCC-----CCC---
Q 007473 177 -----TTPVELIKCLRAIKENA-FSASPYPVILTFEDHLNPHLQ-----AKVAQMITQTFGAMLYSPES-----ECL--- 237 (602)
Q Consensus 177 -----ts~i~f~dvi~aI~~~A-F~~S~yPvILSlE~Hcs~~qQ-----~~ma~~l~~~~Gd~L~~~~~-----~~~--- 237 (602)
|+.++|.+||+.||+++ |..++|||||.||+|++...| .++++.++++|||+||+|+. +.+
T Consensus 94 dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL~eA 173 (339)
T 3h4x_A 94 ELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEA 173 (339)
T ss_dssp GTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSHHHH
T ss_pred ccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCHHHH
Confidence 67899999999999999 889999999999999987665 88999999999999999863 122
Q ss_pred ---CCCCChhhccccEEEec
Q 007473 238 ---KEFPSPEELKYRIIIST 254 (602)
Q Consensus 238 ---~~lPSP~~Lk~KIlik~ 254 (602)
..+|||++|||||||.-
T Consensus 174 Vla~GWPSl~slRGKVlf~L 193 (339)
T 3h4x_A 174 VRAGGWPSRADLAGKFLFEL 193 (339)
T ss_dssp HHHHCCCBTGGGTTCEEEEE
T ss_pred HhcCCCCChHHhCCCEEEEE
Confidence 34899999999999964
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=146.46 Aligned_cols=120 Identities=19% Similarity=0.296 Sum_probs=101.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
.+.|+|+|++|++|+.. +. +.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ...|+
T Consensus 6 ~g~L~v~v~~a~~L~~~------~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~ 73 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKT------KF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLG 73 (140)
T ss_dssp CCEEEEEEEEEESCCCC------SS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEE
T ss_pred CcEEEEEEEEeeCCCCC------CC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEE
Confidence 46799999999999642 33 6689999999875 4689999999999999999999997653 47899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc------cEEEEccCCCCCccCCeEEEEEEEEEEc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG------IHAVPLFDRKGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G------yR~ipL~d~~g~~l~~asL~v~i~~~e~ 598 (602)
|.|||+|..+++++||++.++|..|..| |+++||.+..++.. .++|.|++.|...
T Consensus 74 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~-~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 74 IIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDT-GATIDLVIGYDPP 134 (140)
T ss_dssp EEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEE-EEEEEEEEEECCC
T ss_pred EEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCC-CCEEEEEEEEECC
Confidence 9999999888899999999999999776 45567998877654 4899999998764
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=144.36 Aligned_cols=119 Identities=18% Similarity=0.321 Sum_probs=101.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ..|+|.|
T Consensus 12 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~-~~l~i~V 79 (133)
T 2ep6_A 12 VGILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTV 79 (133)
T ss_dssp SEEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEE
T ss_pred ceEEEEEEEeeECCCC------CCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEEecCCC-CEEEEEE
Confidence 5679999999999964 23456789999999865 4679999999999999999999997543 6799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
||+|..+++++||++.+++..+..|. ++++|.+..++....++|.|.++|.
T Consensus 80 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 80 FDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 99998878999999999999999886 5679988777666678999999875
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=141.28 Aligned_cols=121 Identities=17% Similarity=0.234 Sum_probs=96.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+... ..+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..++...|+|.||
T Consensus 3 ~~L~v~v~~a~~L~~~~---~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~ 77 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGA---FGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSCH---HHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEeeeCCCCCC---ccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEE
Confidence 57999999999996410 01334668999999997643 36789999999999999999999998788889999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|+|... +++||++.++|..|..|+++..+++..+ .+++.|+|.+..
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~----~~~g~i~~~le~ 123 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ----VTEMVLEMSLEV 123 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT----TEEEEEEEEEEC
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCC----CceEEEEEEEEe
Confidence 999775 8999999999999999987644433222 367777777643
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7e-16 Score=143.31 Aligned_cols=125 Identities=19% Similarity=0.278 Sum_probs=98.7
Q ss_pred CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC--cccccccCCCCCCCCeeccEEEEEeecCCccEE
Q 007473 464 PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD--KKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALL 541 (602)
Q Consensus 464 p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d--~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~L 541 (602)
+....|+|+|++|++|+. .+..+.+||||+|.+.+. .+ ..++||++++++.||+|||+|.|.+..+ ...|
T Consensus 17 ~~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l 88 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAK------KDILGASDPYVRVTLYDP-MNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRL 88 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------------CCEEEEEEEEET-TTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEE
T ss_pred CCccEEEEEEEEeeCCCC------CCCCCCCCcEEEEEEECC-CCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEE
Confidence 345789999999999964 234467899999999852 22 2467999999999999999999998765 4689
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCccCcc---------EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---------HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---------R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
+|.|||+|..+++++||++.++|..|..+- ++++|....+..-..++|.|.+.|.
T Consensus 89 ~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 89 LFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 999999998888999999999999986542 7899987655545568999999874
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
Probab=99.66 E-value=8.9e-16 Score=139.18 Aligned_cols=119 Identities=12% Similarity=0.237 Sum_probs=97.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
...|+|+|++|++|+. .+..+.+||||+|.+.+. ..+++|++++++.||+|||+|.|.+..++ .|.|.|
T Consensus 4 ~~~L~V~v~~a~~L~~------~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v 72 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAK------KDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISV 72 (132)
T ss_dssp EEEEEEEEEEEESCCC------CSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEE
T ss_pred eEEEEEEEEEeECCCC------CCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEE
Confidence 3569999999999963 244567899999998642 35789999999999999999999997765 399999
Q ss_pred EecCCCCC---CCccEEEEEeCCCc----cCccEEEEccCCCC--CccCCeEEEEEEEE
Q 007473 546 RKYSMPEK---DEFAGQTCLPVFQL----RPGIHAVPLFDRKG--EELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~---dd~lGq~~lpL~~L----~~GyR~ipL~d~~g--~~l~~asL~v~i~~ 595 (602)
||+|..++ +++||++.+|+..| ..|+++++|....+ ..-..++|.|.+..
T Consensus 73 ~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 73 WNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 99998765 79999999999998 77899999987633 22346789888764
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=140.22 Aligned_cols=119 Identities=21% Similarity=0.275 Sum_probs=99.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.++|+|+|++|++|+.. +..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..++ ..|+|.|
T Consensus 16 ~~~L~V~v~~a~~L~~~------d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v 83 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAK------DKTGSSDPYVTVQVGK-----TKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRV 83 (148)
T ss_dssp CEEEEEEEEEEESCCCC------STTSCCCEEEEEEETT-----EEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEE
T ss_pred ccEEEEEEEeeeCCCCC------CCCCCcCeEEEEEECC-----EEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEE
Confidence 46799999999999642 3456789999999843 5789999999999999999999997765 6799999
Q ss_pred EecCCC-----------CCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 546 RKYSMP-----------EKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 546 ~D~d~~-----------~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
||+|.. +++++||++.+||..+..+. +|++|....+..-..+.|.|+++|.
T Consensus 84 ~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 84 LDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp EECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred EECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 999975 67999999999999997665 5789986665555668999999875
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-15 Score=141.83 Aligned_cols=125 Identities=19% Similarity=0.272 Sum_probs=97.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+... ...|+|.
T Consensus 7 ~g~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~ 79 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAK------KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFE 79 (176)
T ss_dssp CEEEEEEEEEEESCC---------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEE
T ss_pred cEEEEEEEEEeeCCCC------cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEE
Confidence 4679999999999964 234567899999999863221 1467999999999999999999998743 4689999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCcc---------EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGI---------HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~Gy---------R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|||+|..+++++||++.++|..|..+. ++++|....+..-..++|.|.+.|..
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp EEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 999998888999999999999997542 68899876665556789999999865
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.6e-16 Score=140.90 Aligned_cols=113 Identities=12% Similarity=0.176 Sum_probs=94.0
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+.+....+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~ 88 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAM------DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIII 88 (138)
T ss_dssp TTEEEEEEEEEESCCCC------BTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEE
T ss_pred CCeEEEEEEEeeCCCCc------CCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEE
Confidence 35799999999999642 34567899999999875444457899999999999999999999887765 68999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEE-EEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHA-VPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~-ipL~d~~g~~l 584 (602)
.|||+|..+++++||++.++++++..|++| .+|.+..|+++
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 89 TVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPV 130 (138)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCE
T ss_pred EEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeE
Confidence 999999888899999999999999888765 46776666654
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-15 Score=142.75 Aligned_cols=122 Identities=17% Similarity=0.224 Sum_probs=98.3
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEE
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
...+|+|+|++|++|+.. .+. +.+||||+|.+.+ .++||++++++.||+|||+|.|.+. +...|+|.
T Consensus 34 ~~~~L~V~V~~A~~L~~~-----~~~-~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~ 100 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENK-----KNW-FGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFR 100 (173)
T ss_dssp CCEEEEEEEEEEEECCCC-------C-CCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEE
T ss_pred CceEEEEEEEEeECCCCc-----ccC-CCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEE
Confidence 356799999999999621 122 3389999999865 6789999999999999999999884 36789999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc--------cEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG--------IHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G--------yR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
|||+|..+++++||++.++|..+..| ..+++|....+..-..+.|.|.+++..++
T Consensus 101 V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 101 VWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp EEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred EEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 99999888899999999999998654 24788887654444568999999887654
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.8e-15 Score=135.42 Aligned_cols=119 Identities=16% Similarity=0.263 Sum_probs=98.0
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++ ++.||+|||+|.|.+.. ....|+|.
T Consensus 9 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~ 76 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEE
T ss_pred cEEEEEEEEeccCCCC------cccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEE
Confidence 4679999999999964 23456789999999875 357999998 78999999999999875 45689999
Q ss_pred EEecCCCCCCCccEEEEEeCCCc-cCc---cEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQL-RPG---IHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L-~~G---yR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
|||+|..+++++||++.++|..+ ..| .++++|. ..++ ..++|.+.+.|....
T Consensus 77 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~--~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE--YKGEIWVALSFKPSG 132 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE--EEEEEEEEEEEEECC
T ss_pred EEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc--cCEEEEEEEEEEeCC
Confidence 99999888899999999999999 555 4678887 3333 358999999998643
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.59 E-value=5e-15 Score=135.05 Aligned_cols=105 Identities=13% Similarity=0.114 Sum_probs=87.2
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCC--ccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPE--MALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pe--la~Lrf 543 (602)
..|+|+|++|++|+. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...+ ...|+|
T Consensus 20 ~~L~V~V~~a~~L~~-------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~ 92 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-------EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL 92 (134)
T ss_dssp TEEEEEEEEEECCCC-------TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred CEEEEEEEEeeCCCC-------CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence 569999999999963 23466899999999764444567899999999999999999999 76543 368999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFD 578 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d 578 (602)
.|||+|..+++++||++.+||..+..|. +|.+|.+
T Consensus 93 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 93 SVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999998888999999999999998765 4566654
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-14 Score=135.66 Aligned_cols=106 Identities=20% Similarity=0.225 Sum_probs=88.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 41 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 112 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 112 (152)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEeECCCC------ccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEE
Confidence 4579999999999964 23456789999999974 23457899999999999999999999876544 68999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDR 579 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~ 579 (602)
.|||+|..+++++||++.++|..+..|. +|.+|.+.
T Consensus 113 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 113 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred EEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 9999998888999999999999998874 56677653
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.8e-15 Score=141.44 Aligned_cols=112 Identities=13% Similarity=0.161 Sum_probs=89.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCcc--EEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA--LLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela--~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 36 ~~~L~V~v~~a~~L~~~------d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 109 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAM------DANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 109 (166)
T ss_dssp TTEEEEEEEEEESCCCC------STTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeECCCCc------cCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEE
Confidence 35799999999999642 345678999999998755445678999999999999999999999776654 8999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccE-EEEccCCCCCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIH-AVPLFDRKGEE 583 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR-~ipL~d~~g~~ 583 (602)
.|||+|..+++++||++.+++..+..+++ |.+|.+..+++
T Consensus 110 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~ 150 (166)
T 2cm5_A 110 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 150 (166)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred EEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCc
Confidence 99999988889999999999999866654 33555544443
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-15 Score=140.48 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=88.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 29 ~~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v 102 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKS------DVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 102 (153)
T ss_dssp TTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred CCEEEEEEEEeECCCCc------CCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEE
Confidence 45799999999999642 34466899999999763322346799999999999999999999987765 68999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEE-EEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHA-VPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~-ipL~d~~g~~l 584 (602)
.|||+|..+++++||++.+++.....|+++ .+|.+..++++
T Consensus 103 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~ 144 (153)
T 1w15_A 103 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 144 (153)
T ss_dssp EEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCee
Confidence 999999888899999999999997777654 35666555543
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.1e-15 Score=138.22 Aligned_cols=119 Identities=17% Similarity=0.088 Sum_probs=92.1
Q ss_pred cceeEEEEEEeccCcccCccC-c--CCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccE
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQ-M--DCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~-~--~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~ 540 (602)
..+.|+|+|+.|++|+..... . .+. ..+.+||||+|.+.+ ....||++++++.||+|||+|.|.+.. ...
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~ 100 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCANVTD--GGH 100 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEE--ECE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEEcCC--CCE
Confidence 357899999999999742100 0 000 124589999999854 234689999999999999999999864 358
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCccCc-------cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPG-------IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G-------yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|.|.|||+|..+++++||++.|||..|..| -.|++|.. .+.|.|+++|.
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 999999999888899999999999998754 36788853 57889988874
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-14 Score=132.55 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=90.3
Q ss_pred ceeEEEEEEeccCcccCccCcC--C---CCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMD--C---KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~--~---d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~ 540 (602)
.+.|+|+|++|++|+....... . .....+||||+|.+.+ ....+|++++++.||+|||+|+|.+..+ ..
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~ 78 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEEecCC--CE
Confidence 4679999999999974210000 0 0012389999999853 2346899999999999999999998755 78
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCccCc-c----EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPG-I----HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G-y----R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|+|.|||+|..+++++||++.+||..+..+ . .|++|. +.+.|.|+++|..
T Consensus 79 L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE-------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB-------SSCEEEEEEEEEE
T ss_pred EEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC-------CCeEEEEEEEEEe
Confidence 999999999888899999999999998753 2 355554 2478999998864
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=133.04 Aligned_cols=100 Identities=18% Similarity=0.271 Sum_probs=84.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lr 542 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...++ ..|+
T Consensus 28 ~~~L~V~v~~a~~L~~~------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 101 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPM------DSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLR 101 (142)
T ss_dssp GTEEEEEEEEEESCCCC------CTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEE
T ss_pred CCEEEEEEEEecCCCCC------CCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEE
Confidence 45799999999999642 34567899999999864444567899999999999999999998 654443 5899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
|.|||+|..+++++||++.++|..+..|.
T Consensus 102 i~V~d~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 102 ISVCDEDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp EEEEEECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHcCCCC
Confidence 99999998888999999999999998764
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=132.04 Aligned_cols=111 Identities=16% Similarity=0.183 Sum_probs=89.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEe-ecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL-TIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v-~~pel--a~Lr 542 (602)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+ ...++ ..|+
T Consensus 20 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 93 (141)
T 1v27_A 20 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 93 (141)
T ss_dssp TTEEEEEEEEEESCCC------CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEE
T ss_pred CCEEEEEEEEccCCCC------cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEE
Confidence 3579999999999964 2445678999999987644445678999999999999999999994 43443 6899
Q ss_pred EEEEecCCCCC--CCccEEEEEeCCCccC-c-cEEEEccCCCCC
Q 007473 543 VEVRKYSMPEK--DEFAGQTCLPVFQLRP-G-IHAVPLFDRKGE 582 (602)
Q Consensus 543 f~V~D~d~~~~--dd~lGq~~lpL~~L~~-G-yR~ipL~d~~g~ 582 (602)
|.|||+|..++ +++||++.++|..+.. + -+|.+|.+....
T Consensus 94 i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g 137 (141)
T 1v27_A 94 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSG 137 (141)
T ss_dssp EEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSC
T ss_pred EEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccC
Confidence 99999998876 8999999999998753 2 467899876543
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.3e-15 Score=139.10 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=86.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 97 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (159)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence 4579999999999964 244567899999999864333356799999999999999999999877665 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV 574 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i 574 (602)
.|||+|..+++++||++.+++.++..|++|+
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w 128 (159)
T 1tjx_A 98 TVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 128 (159)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHH
T ss_pred EEEECCCCCCCceEEEEEECCCCCCcHHHHH
Confidence 9999998888999999999999987777665
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.3e-15 Score=135.86 Aligned_cols=112 Identities=14% Similarity=0.193 Sum_probs=89.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 22 ~~~L~V~v~~a~~L~~~------d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~ 95 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYA------DEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQ 95 (148)
T ss_dssp TTEEEEEEEEEESCCCS------BTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEE
T ss_pred CCEEEEEEEEecCCCCc------ccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEE
Confidence 45799999999999642 2 3466899999999864444457899999999999999999999887765 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEE 583 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~ 583 (602)
|.|||+|..+++++||++.+||..+..+ -+|++|....+..
T Consensus 96 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~ 139 (148)
T 3fdw_A 96 FSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAE 139 (148)
T ss_dssp EEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC----
T ss_pred EEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccccc
Confidence 9999999888899999999999999754 3678888766554
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=133.08 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=89.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|.|
T Consensus 31 ~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 104 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM------DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 104 (149)
T ss_dssp SEEEEEEEEEESCCCC------STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEEeeCCCCC------CCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEE
Confidence 4699999999999642 34567899999999875545567899999999999999999999876554 5899999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCcc--EEEEccCC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGI--HAVPLFDR 579 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~Gy--R~ipL~d~ 579 (602)
||+|..+++++||++.++|..|..+- +|.+|.+.
T Consensus 105 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 105 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred EECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 99998888999999999999987653 56788763
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-14 Score=132.23 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=87.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+ +||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 23 ~~~L~v~v~~a~~L~~~------d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 95 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAF------SEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDV 95 (142)
T ss_dssp TTEEEEEEEEEECCCCS------STTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEE
T ss_pred CCEEEEEEEEeECCCCC------CCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEE
Confidence 45799999999999642 3456 899999999864444467899999999999999999999876554 38999
Q ss_pred EEEecCCCCC--CCccEEEEEeCCCccCc---cEEEEccCCCCC
Q 007473 544 EVRKYSMPEK--DEFAGQTCLPVFQLRPG---IHAVPLFDRKGE 582 (602)
Q Consensus 544 ~V~D~d~~~~--dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~ 582 (602)
.|||+|..++ +++||++.++|..+..+ -+|.+|.+..++
T Consensus 96 ~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 96 AVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp EEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred EEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 9999997653 57999999999998654 346677765443
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=8e-15 Score=137.48 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=85.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|+|+|+.|++|+.. +..+.+||||+|.+.+...+ ..++||+++++++||+|||+|.|.+...++ ..|+
T Consensus 42 ~~~L~V~Vi~a~~L~~~------d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~ 115 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSAL------LQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLR 115 (155)
T ss_dssp TTEEEEEEEEEECGGGT------CCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEE
T ss_pred CCEEEEEEEEccCcCCc------ccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEE
Confidence 35799999999999642 34567899999999864333 246899999999999999999999876554 5799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC-c---cEEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP-G---IHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~-G---yR~ipL~ 577 (602)
|.|||+|..+++++||++.++|..+.. | -+|.+|.
T Consensus 116 ~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 116 VDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999998889999999999999852 2 2455553
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=132.24 Aligned_cols=104 Identities=20% Similarity=0.222 Sum_probs=86.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 104 (143)
T 3f04_A 33 NNQLLVGIIQAAELPAL------DMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEECCCCB------GGGBCCCEEEEEEEES--CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEecCCCCC------CCCCCcCcEEEEEEEC--CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence 45799999999999642 3446689999999964 23457899999999999999999999876654 68999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLF 577 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~ 577 (602)
.|||+|..+++++||++.++|..+..|. .|.+|.
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred EEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 9999998888999999999999998874 355664
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=7.6e-15 Score=134.42 Aligned_cols=109 Identities=13% Similarity=0.167 Sum_probs=88.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC---------cccccccCCCCCCCCeeccEEEEE-eecC
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD---------KKMKSTKKKVDNWTPVWDDEFTFP-LTIP 536 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d---------~~k~kTkvi~nn~nPvWNEtf~F~-v~~p 536 (602)
+.|+|+|++|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|. +...
T Consensus 18 ~~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 91 (142)
T 1rh8_A 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEecCCCC------CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH
Confidence 469999999999964 244567899999999865432 246799999999999999999997 6543
Q ss_pred C--ccEEEEEEEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCC
Q 007473 537 E--MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKG 581 (602)
Q Consensus 537 e--la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g 581 (602)
+ ...|+|.|||+|..+++++||++.+||..+..+ -+|.+|.+..+
T Consensus 92 ~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred HccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 3 358999999999888899999999999998654 57889987653
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=5e-14 Score=128.93 Aligned_cols=106 Identities=17% Similarity=0.123 Sum_probs=85.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|+.|++. +..+.+||||+|.+.+. ....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~~---------d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~ 94 (138)
T 1wfm_A 25 KAELFVTRLEAVTS---------NHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECC---------CCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEEEcC---------CCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEE
Confidence 35799999999832 34567899999999642 12346799999999999999999999887665 58999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKG 581 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g 581 (602)
.|||+|..+++++||++.+||..+..+ -.|.+|.....
T Consensus 95 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred EEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 999999988899999999999999643 35778876543
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-14 Score=130.08 Aligned_cols=106 Identities=19% Similarity=0.242 Sum_probs=86.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC-C--ccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP-E--MALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p-e--la~Lr 542 (602)
...|+|+|++|++|+.. +..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+ + ...|+
T Consensus 25 ~~~L~v~v~~a~~L~~~------d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 96 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILY 96 (141)
T ss_dssp SCCEEEEEEEEESCCCC------SSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEE
T ss_pred CCEEEEEEEEeECCCCC------CCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEE
Confidence 35699999999999642 3456789999999974 234578999999999999999999985322 2 36899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCC
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDR 579 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~ 579 (602)
|.|||+|..+++++||++.++|..+..|. +|++|...
T Consensus 97 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 97 LQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 99999998888999999999999998774 46677644
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.2e-14 Score=127.93 Aligned_cols=97 Identities=16% Similarity=0.258 Sum_probs=81.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALL 541 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~L 541 (602)
...|.|+|++|++|+.. +.. +.+||||+|.+.+. ...++||++++++.||+|||+|.|. +...++ ..|
T Consensus 21 ~~~L~v~v~~a~~L~~~------d~~~~~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l 92 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAM------DEQSMTSDPYIKMTILPE--KKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCCC------BTTTTBCEEEEEEEEETT--TCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEeeCCCCC------CCCCCCCCCEEEEEEecC--CCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEE
Confidence 45799999999999642 332 56899999999752 2367899999999999999999996 766554 589
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
+|.|||+|..+++++||++.++|..+..+
T Consensus 93 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 93 HFTILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred EEEEEECCCCCCCcEEEEEEEehhHccCC
Confidence 99999999888899999999999999865
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=6e-14 Score=129.41 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=84.9
Q ss_pred ceeEEEEEEeccCcccC-ccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLD-FKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~-~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|.|+|++|++|+.. ......+..+.+||||+|.+.+. ...++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPD--QKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETC--CSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeC--CCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 35799999999999741 00000123457899999999742 2357799999999999999999999876554 3899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~ 577 (602)
|.|||+|..+++++||++.++|..+..+- .|.+|.
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 99999998888999999999999986543 344554
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.9e-14 Score=131.19 Aligned_cols=109 Identities=16% Similarity=0.180 Sum_probs=88.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~ 544 (602)
...|.|+|++|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 26 ~~~L~V~v~~a~~L~~~------d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~ 98 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISK------Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVT 98 (153)
T ss_dssp SSEEEEEEEEEESCCCC------S-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEE
T ss_pred CCEEEEEEEEeeCCCCC------C-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEE
Confidence 46799999999999642 2 366899999999865555677899999999999999999999865444 469999
Q ss_pred EEecCCCCC-CCccEEEEEeCCCccC-c---cEEEEccCCCC
Q 007473 545 VRKYSMPEK-DEFAGQTCLPVFQLRP-G---IHAVPLFDRKG 581 (602)
Q Consensus 545 V~D~d~~~~-dd~lGq~~lpL~~L~~-G---yR~ipL~d~~g 581 (602)
|||+|..++ +++||++.++|..|.. + -.|.+|.+...
T Consensus 99 V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 99 VWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp EEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred EEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 999998766 8999999999999874 3 35778876543
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=6.6e-14 Score=125.91 Aligned_cols=105 Identities=17% Similarity=0.189 Sum_probs=79.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEee-cCC--ccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLT-IPE--MALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~-~pe--la~Lr 542 (602)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+. ..+ ...|+
T Consensus 17 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 90 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 90 (129)
T ss_dssp TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEE
Confidence 3569999999999964 23456789999999976444456789999999999999999999953 332 36899
Q ss_pred EEEEecCCCCC--CCccEEEEEeCCCccC-c-cEEEEc
Q 007473 543 VEVRKYSMPEK--DEFAGQTCLPVFQLRP-G-IHAVPL 576 (602)
Q Consensus 543 f~V~D~d~~~~--dd~lGq~~lpL~~L~~-G-yR~ipL 576 (602)
|.|||+|..++ +++||++.+||..+.. | -+|.+|
T Consensus 91 ~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 91 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 99999998876 9999999999998753 3 245555
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.3e-14 Score=133.11 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=86.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCC-CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKF-WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~-~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
..|.|+|++|++|+.. +. .+.+||||+|.+.+......++||++++++.||+|||+|.|.+.. +...|+|.|
T Consensus 30 ~~L~V~v~~a~~L~~~------d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V 102 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK------PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIV 102 (171)
T ss_dssp TEEEEEEEEEESCCCC------C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEE
T ss_pred CEEEEEEEEeeCCCCC------CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEE
Confidence 4699999999999642 32 466899999999864332347799999999999999999999854 357899999
Q ss_pred E-ecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCC
Q 007473 546 R-KYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRK 580 (602)
Q Consensus 546 ~-D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~ 580 (602)
| |+|..+++++||++.++|..+..| -+|.+|....
T Consensus 103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 103 WGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp EEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred EEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 9 999888899999999999999755 3577887543
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=6.4e-13 Score=135.49 Aligned_cols=123 Identities=18% Similarity=0.211 Sum_probs=97.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|++|++|+. .+..+.+||||+|.+.+. +..+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 18 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~--~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~ 89 (284)
T 2r83_A 18 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVM 89 (284)
T ss_dssp TTEEEEEEEEEECCCC------CSSSSSCCEEEEEEEETC--TTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCeEEEEEEEcC--CCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEE
Confidence 3579999999999964 234567899999998752 2346789999999999999999999877665 58999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCC-ccCCeEEEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGE-ELGSARLLMRFEFY 596 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~-~l~~asL~v~i~~~ 596 (602)
.|||+|..+++++||++.++|..+..|. .|.+|.+..+. ....+.|.+.+.+.
T Consensus 90 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~ 146 (284)
T 2r83_A 90 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV 146 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE
T ss_pred EEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec
Confidence 9999998888999999999999997763 56788876543 22346676666553
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-13 Score=123.54 Aligned_cols=115 Identities=13% Similarity=0.150 Sum_probs=98.3
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
.+-|+|.|.++.+|| +.+|||++|.+-| .++||++++ ++.||+|||+|+|++..+-. .+|.
T Consensus 20 ~msL~V~l~~a~~Lp-----------g~~Dp~akv~FRg-----~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~ 83 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----------GRADRIAKVTFRG-----QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLE 83 (144)
T ss_dssp CEEEEEEEEEEESCC-----------SCEEEEEEEEETT-----EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEE
T ss_pred cEEEEEEEEEecCCC-----------CCCCCeEEEEEec-----cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEE
Confidence 456999999999996 2379999999976 689999998 57999999999999876543 5899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCccE---EEEccCCCCCccCCeEEEEEEEEEE
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGIH---AVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~GyR---~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|+|++...++++||++++||..+..+-+ ..+|.|.+++++. |++-+.+.|..
T Consensus 84 v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~-a~I~l~l~Y~p 140 (144)
T 3l9b_A 84 IQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK-TSLSMEVRYQA 140 (144)
T ss_dssp EEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE-EEEEEEEEEEE
T ss_pred EEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc-cEEEEEEEecC
Confidence 999999999999999999999998865432 3589999999976 89999988865
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=118.88 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=79.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
..|+|+|+.|++++. .+.+||||+|. + .+.||++++ ++.||+|||+|.|.+..++. .|+|.|
T Consensus 5 ~~L~V~V~~A~~l~~---------~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V 67 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV 67 (131)
T ss_dssp EEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCCSS-EEEEEE
T ss_pred eEEEEEEEEeECCCC---------CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCCCC-eEEEEE
Confidence 579999999997631 24579999999 2 244566665 57999999999999986544 599999
Q ss_pred EecCCCCCCCccEEEEEeCCCccC----c-cEEEEcc----CCCCCc-----cCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRP----G-IHAVPLF----DRKGEE-----LGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~----G-yR~ipL~----d~~g~~-----l~~asL~v~i~~ 595 (602)
||+| .++|++||++.+||..+.. | +++.|+. ..+|+. ....++++.+.|
T Consensus 68 ~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 68 WNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 9999 7789999999999999842 3 2454443 233332 234668877766
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=133.44 Aligned_cols=123 Identities=17% Similarity=0.249 Sum_probs=94.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCcc--EEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA--LLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela--~Lrf 543 (602)
...|.|+|++|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 19 ~~~L~v~v~~a~~L~~------~d~~g~~dPyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 90 (296)
T 1dqv_A 19 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 90 (296)
T ss_dssp SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCcCeEEEEEEEc--CCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence 3569999999999964 24456789999999852 334678999999999999999999998776654 7999
Q ss_pred EEEecCCCCCCCccEEEEEe-CCCcc---Cc-cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLP-VFQLR---PG-IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lp-L~~L~---~G-yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
.|||+|..+++++||++.++ +..+. .+ -.|.+|....+.....+.|.+.+.+.
T Consensus 91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~ 148 (296)
T 1dqv_A 91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL 148 (296)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE
T ss_pred EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec
Confidence 99999988889999999996 43332 22 34678876655554556777666553
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.5e-13 Score=136.00 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=85.3
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 149 ~~~l~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 222 (284)
T 2r83_A 149 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 222 (284)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEE
T ss_pred CCceEEEEEEeECCCC------cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEE
Confidence 3569999999999964 244567899999999753333356799999999999999999999987765 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV 574 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i 574 (602)
.|||+|..+++++||++.+++.++..|++|+
T Consensus 223 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w 253 (284)
T 2r83_A 223 TVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 253 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCHHHHHHH
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCCcHHHHH
Confidence 9999999888999999999999877666554
|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=142.42 Aligned_cols=115 Identities=18% Similarity=0.275 Sum_probs=95.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+....|+|.|
T Consensus 386 ~~~l~v~v~~a~~L~~------~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v 454 (510)
T 3jzy_A 386 IGRLMVHVIEATELKA------CKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTL 454 (510)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEE
T ss_pred CceEEEEeceeecCCC------CCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 4679999999999963 24457789999999843 578999999999999999999999877778899999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCcc-------EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGI-------HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~Gy-------R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
||+|..+++++||++.+||..+..|. .+++|.+. ..++|.|++++.
T Consensus 455 ~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 455 FDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDLQ 507 (510)
T ss_dssp EECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEEE
T ss_pred EeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEEE
Confidence 99999888999999999999998653 46777644 346777777653
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-12 Score=121.89 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=81.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
...|+|+|+.|++++. .+.+||||+|. + .+.||++++ ++.||+|||+|.|.+..++. .|+|.
T Consensus 13 ~~~L~V~V~~A~~l~~---------~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~ 75 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRLDL-GLTVE 75 (167)
T ss_dssp CCEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCTTS-EEEEE
T ss_pred eEEEEEEEEEEECCCC---------CCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCCCC-EEEEE
Confidence 3579999999997631 24579999999 2 245677776 57999999999999986544 69999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccC----c-cEEEEc----cCCCCCc-----cCCeEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRP----G-IHAVPL----FDRKGEE-----LGSARLLMRFEFY 596 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~----G-yR~ipL----~d~~g~~-----l~~asL~v~i~~~ 596 (602)
|||+| ..+|++||++.+||..+.. | +++.|+ ...+|+. ...+.+++++.+.
T Consensus 76 V~D~d-~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 76 VWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEECC-SSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred EEECC-CCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999 7789999999999999842 2 133333 3334441 1234577777763
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-12 Score=149.67 Aligned_cols=117 Identities=18% Similarity=0.281 Sum_probs=89.5
Q ss_pred cCCCCCCC----CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEE
Q 007473 456 VFDPKEKL----PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTF 531 (602)
Q Consensus 456 ~f~p~~~~----p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F 531 (602)
.|||.... +....|+|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|
T Consensus 3 ~fdP~~~~~ve~~~~g~L~V~Vi~A~nL~~~---~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F 77 (749)
T 1cjy_A 3 FIDPYQHIIVEHQYSHKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEF 77 (749)
T ss_dssp ----------CCCCCEEEEEEEEEEECCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEE
T ss_pred CCCCCccccccCCCccEEEEEEEEEECCCCc---cccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEE
Confidence 47776432 2346899999999999631 001345678999999988643 35789999999999999999999
Q ss_pred EeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccE---EEEccC
Q 007473 532 PLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIH---AVPLFD 578 (602)
Q Consensus 532 ~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR---~ipL~d 578 (602)
.+..+....|+|.|||+|..+ +++||++.++|..|..|++ |++|..
T Consensus 78 ~v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 78 ILDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 998877788999999999888 9999999999999999874 556653
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.2e-11 Score=134.01 Aligned_cols=134 Identities=19% Similarity=0.255 Sum_probs=97.0
Q ss_pred ccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCccccc
Q 007473 434 ANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKS 513 (602)
Q Consensus 434 ~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~k 513 (602)
..+.|==|-||...... |........+.|+|+|+.|++|+. |.++.+||||+|.+.+ .++|
T Consensus 368 ~g~~C~C~C~~~~~t~~-------~~C~~~~~~~~L~V~V~~A~~L~~-------D~~g~sDPYV~v~l~~-----~~~k 428 (540)
T 3nsj_A 368 SHDSCQCECQDSKVTNQ-------DCCPRQRGLAHLVVSNFRAEHLWG-------DYTTATDAYLKVFFGG-----QEFR 428 (540)
T ss_dssp SSCTTCEEESCTTTBCG-------GGCBSSTTEEEEEEEEEEEESCCC-------SSCSCCCEEEEEEETT-----EEEE
T ss_pred CCCceEeeCCCCCCccc-------ccccccCcccEEEEEEEEccCCCc-------ccCCCcCeEEEEEECC-----Eeee
Confidence 34557667777643322 111111124679999999999952 4567799999999965 4689
Q ss_pred ccCCCCCCCCeeccEEEEEee-cCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEE
Q 007473 514 TKKKVDNWTPVWDDEFTFPLT-IPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMR 592 (602)
Q Consensus 514 Tkvi~nn~nPvWNEtf~F~v~-~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~ 592 (602)
|++++++.||+|||+|.|.+. .+....|+|.|||+|..++||+||++.++|. .|-...-. ++..++|.+.
T Consensus 429 Tkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g~~~~~~------~l~~G~l~~~ 499 (540)
T 3nsj_A 429 TGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SGFHEVTC------ELNHGRVKFS 499 (540)
T ss_dssp CCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SEEEEEEE------ECSSSEEEEE
T ss_pred eeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CCcEEEEE------EcCCeEEEEE
Confidence 999999999999999999864 4456789999999999888999999999987 46432221 1334677776
Q ss_pred EEE
Q 007473 593 FEF 595 (602)
Q Consensus 593 i~~ 595 (602)
++.
T Consensus 500 ~~~ 502 (540)
T 3nsj_A 500 YHA 502 (540)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-12 Score=134.22 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=82.3
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|+|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 151 ~~~l~v~v~~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 224 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 224 (296)
T ss_dssp TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred cceeEEEEEEeecCCc------cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEE
Confidence 3579999999999964 234566799999998753333457799999999999999999999876654 46999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC-cc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP-GI 571 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~-Gy 571 (602)
.|||+|..+++++||++.+++..+.. |+
T Consensus 225 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~ 253 (296)
T 1dqv_A 225 AVVDYDCIGHNEVIGVCRVGPEAADPHGR 253 (296)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCHHHH
T ss_pred EEEeCCCCCCCceEEEEEECCccCCchhH
Confidence 99999998889999999999998754 44
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.4e-12 Score=138.93 Aligned_cols=121 Identities=18% Similarity=0.292 Sum_probs=21.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC---CCCeeccEEEEEeecCCccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN---WTPVWDDEFTFPLTIPEMALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn---~nPvWNEtf~F~v~~pela~Lr 542 (602)
.+.|+|+|+.|++|+.. .||||+|.+.+ ....||++++++ .||+|||+|+|.+. +....|.
T Consensus 10 ~~~L~V~VieAk~L~~~-----------ddpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~ 73 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPK-----------KRYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALR 73 (483)
T ss_dssp EECC------------------------------------------------------------CCEECC----------
T ss_pred ccEEEEEEEEcCCcCCC-----------CCCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEE
Confidence 45799999999999531 18999999865 235689999988 99999999999975 3357899
Q ss_pred EEEEec-C---CCCCCCccEEEEEeCCCccCcc---EEEEccCCCCC----------------------ccCCeEEEEEE
Q 007473 543 VEVRKY-S---MPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGE----------------------ELGSARLLMRF 593 (602)
Q Consensus 543 f~V~D~-d---~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~----------------------~l~~asL~v~i 593 (602)
|.|||+ | ..+++++||.+.+|++.+..|. .|.||.+..+. .-..++|.+++
T Consensus 74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v 153 (483)
T 3bxj_A 74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKA 153 (483)
T ss_dssp ---------------------------------CCEECC--------------------------------------CEE
T ss_pred EEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEE
Confidence 999994 4 2567999999999999998763 46788654431 12357899999
Q ss_pred EEEEccccC
Q 007473 594 EFYEADVLP 602 (602)
Q Consensus 594 ~~~e~~~~~ 602 (602)
.|.+..|+|
T Consensus 154 ~~~~~~vlP 162 (483)
T 3bxj_A 154 RYQTMSILP 162 (483)
T ss_dssp EEEECCBCC
T ss_pred Eeeeeeecc
Confidence 999999987
|
| >2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=7.2e-10 Score=113.24 Aligned_cols=136 Identities=15% Similarity=0.273 Sum_probs=101.9
Q ss_pred CCcccccccccCCcccccCCcc-------CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQF-------SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCL 186 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql-------~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi 186 (602)
+.||+++.|-.|||++-.+... .+..-......-|..|+|.++|+|++ +..++||... ...+|.||+
T Consensus 13 ~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~~-----~~~~~H~~~~-~~~~~~~~L 86 (274)
T 2plc_A 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIF-LNASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEE-EEEEHHHHH
T ss_pred CCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEECC-----cEEEEEcCCC-CCCCHHHHH
Confidence 4799999999999997655321 12233344678899999999999992 3689999764 467999999
Q ss_pred HHHhhcccccCCCceEEEecCCCCHHHH-HHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecC
Q 007473 187 RAIKENAFSASPYPVILTFEDHLNPHLQ-AKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 187 ~aI~~~AF~~S~yPvILSlE~Hcs~~qQ-~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 255 (602)
..|+++.=..-.=.|||+|+++.+.+.. ..+++.+.+.||+.++.++. ......|++.++||||+|-..
T Consensus 87 ~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~pTL~e~rGK~vlv~~ 157 (274)
T 2plc_A 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHHHHhhceeecCcccccCCCCCCHHHhCCCEEEEEe
Confidence 9999985555344899999998754222 22345566899999998652 224678999999999999754
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.7e-09 Score=123.73 Aligned_cols=106 Identities=17% Similarity=0.284 Sum_probs=87.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|.|+|+.|++|+. .+..+.+||||++.+.+.+....+++|++++++.||+|||+|.|.+...+. ..|.|.|
T Consensus 172 ~~L~V~v~~a~~L~~------~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v 245 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEI 245 (674)
T ss_dssp SEEEEEEEEEESCCC------CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEE
T ss_pred ceeeeeeecccccCC------CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEE
Confidence 468999999999964 245677899999999876666678899999999999999999999876554 4599999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc--cEEEEccC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG--IHAVPLFD 578 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G--yR~ipL~d 578 (602)
||+|..+++++||++.++++.+..+ -.|.+|.+
T Consensus 246 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 246 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp EECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred eecccccccccccccccchhhhccCCcccceeecc
Confidence 9999999999999999999988643 23455554
|
| >3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0001 Score=75.60 Aligned_cols=136 Identities=12% Similarity=0.143 Sum_probs=90.0
Q ss_pred CCcccccccccCCcccccCCc--c---CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQ--F---SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Q--l---~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
+.||+++.|=-|||++-..-. + .+..-......=|..|+|-+.|+|-..++ +...++||-..+ ..+|.||+..
T Consensus 20 ~~pl~~lsiPGTHdS~a~~~~~~~~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~e 97 (298)
T 3ea1_A 20 NIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPLYL-YVTLHEFINE 97 (298)
T ss_dssp TSBTTTSCEEEETTTTCTTCCSHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEECTT-SCEEEEETTEEE-EEEHHHHHHH
T ss_pred CCeeeeeeeccccccccccCCCchhhhcccCccccHHHHHhcCCeEEEEEeEecCC-CcEEEECCcccc-cCCHHHHHHH
Confidence 679999999999998654321 0 00111112345688999999999975433 356789984332 4679999999
Q ss_pred HhhcccccCCCceEEEecCCCCH---HHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhccccEEEecC
Q 007473 189 IKENAFSASPYPVILTFEDHLNP---HLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~---~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 255 (602)
|+++.=....==|||+|.+-=+. ....-.+.+++.+|++.++.+ ....|+..++||||+|-.+
T Consensus 98 i~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~~----~~~~ptLge~RGKivll~r 163 (298)
T 3ea1_A 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFLK----TEGNIKLGDARGKIVLLKR 163 (298)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBCC----CCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCccccc----CCCCCcHHHhcCCEEEEEe
Confidence 99865333334478888663321 122334556677888866543 2456899999999999865
|
| >3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=9e-05 Score=76.40 Aligned_cols=136 Identities=16% Similarity=0.228 Sum_probs=87.6
Q ss_pred CCcccccccccCCcccccCCc--cC---CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQ--FS---SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Q--l~---g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
+.||+++.|=-|||++-..-. +. +..-......=|..|+|-+.|+|...++ +...++||-..+ ..+|.|||+.
T Consensus 16 ~~~l~~lsiPGTHdS~~~~~~~p~~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~~ 93 (306)
T 3v1h_A 16 GKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASAD-NMISVHHGMVYL-HHELGKFLDD 93 (306)
T ss_dssp TSBGGGSCEEEETTGGGGGCCCHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEEEET-TEEEEEETTEEE-EEEHHHHHHH
T ss_pred CCEeecceeccccchhhccCCCcccchhhccCCCCHHHHHHhCcceEEEEeeecCC-CcEEEEccCccc-CCcHHHHHHH
Confidence 689999999999998754311 00 0111112456788999999999964322 346789985332 5799999999
Q ss_pred HhhcccccCCCceEEEecCCCCH--HHHHHHHHHHHHH-h-----hcccCCCCCCCCCCCCChhhccccEEEecC
Q 007473 189 IKENAFSASPYPVILTFEDHLNP--HLQAKVAQMITQT-F-----GAMLYSPESECLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~-~-----Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 255 (602)
|+++.=....=-|||+|+..-+. ..+...++++++. + .++.++. ...+|+..++||||+|-.+
T Consensus 94 i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~----~~~~PtLge~RGKIvll~r 164 (306)
T 3v1h_A 94 AKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG----SNANPTLKETKGKIVLFNR 164 (306)
T ss_dssp HHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC----SCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC----CCCCCchHHhcCcEEEEEe
Confidence 99865333334578888766543 1233444444432 1 2222222 2468999999999999865
|
| >1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.001 Score=59.26 Aligned_cols=90 Identities=16% Similarity=0.226 Sum_probs=63.0
Q ss_pred CCCceEEEEEecCCCCcccccc-cCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCc-
Q 007473 493 PPQFYTRVGIAGVPADKKMKST-KKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG- 570 (602)
Q Consensus 493 ~~DpyV~V~i~G~p~d~~k~kT-kvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G- 570 (602)
..|||+.|.+.-.... .+.+| .+.+.+..|+||++|.-.|... ..|.+.|+... .+|++.+++++..|...
T Consensus 26 ~lDPy~aV~vdE~~~~-e~g~t~~~K~kT~~P~Wne~Fd~~V~~G--r~l~i~Vfh~a----~~fvAn~tV~~edL~~~c 98 (126)
T 1yrk_A 26 ANQPFCAVKMKEALST-ERGKTLVQKKPTMYPEWKSTFDAHIYEG--RVIQIVLMRAA----EEPVSEVTVGVSVLAERC 98 (126)
T ss_dssp SCCCEEEEEEEEEEEE-TTEEEEECCSCCBCCCTTCEEEEECCTT--CEEEEEEEEET----TEEEEEEEEEHHHHHHHH
T ss_pred cCCceEEEEeeeeEEc-ccceeecccCCCCCcCccceEEeeeeCC--EEEEEEEEcCC----CCeeeEEEEEHHHHHhhh
Confidence 3699999987521110 12344 5667789999999999887643 47888998654 38999999999998632
Q ss_pred -------cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 571 -------IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 571 -------yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
--||.|. +.+.|++.|++.
T Consensus 99 ~~~~g~~e~WvdLe-------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 99 KKNNGKAEFWLDLQ-------PQAKVLMSVQYF 124 (126)
T ss_dssp HTTTTEEEEEEECB-------SSCEEEEEEEEE
T ss_pred ccCCCceEEEEecc-------cCcEEEEEEEEe
Confidence 2356665 246788888775
|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0018 Score=58.36 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=70.3
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccc-cCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKST-KKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kT-kvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
|+|.+.+..--+.. .. .....||||.|.+.-... ..+.+| .+.+.++.|+||++|.-.|.. -..|.+.|+.
T Consensus 12 lRi~l~~~~~~~~~--~~---~~~~lDPY~aV~VdE~~~-te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh 83 (138)
T 2enj_A 12 LRIGLSNFDCGSCQ--SC---QGEAVNPYCAVLVKEYVE-SENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKG 83 (138)
T ss_dssp EEEEEEEEECCCCC--CS---CCCCCCCEEEEEEEEEEE-ETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEEC
T ss_pred eEEEeeccccCCCC--Cc---ccccCCceEEEEeeeeee-ccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEc
Confidence 77777655432211 00 012369999998753110 012345 445567899999999888754 3578899985
Q ss_pred cCCCCCCCccEEEEEeCCCccCc--------cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG--------IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G--------yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
.. .+|++.+++++..|... --||.|. +.+.|++.|++.
T Consensus 84 ~a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe-------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 84 KN----VDLISETTVELYSLAERCRKNNGKTEIWLELK-------PQGRMLMNARYF 129 (138)
T ss_dssp SS----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB-------SSCEEEEEEEEC
T ss_pred CC----CCeeeEEEEEHHHHHhhhccCCCceEEEEecc-------cCcEEEEEEEEE
Confidence 43 38999999999998632 2356665 246788888875
|
| >3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.012 Score=58.17 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=52.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc--------------------cc-chHHHHHHHHhhccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT--------------------TP-VELIKCLRAIKENAF 194 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--------------------s~-i~f~dvi~aI~~~AF 194 (602)
.-+-|.++|..|+..||..||+||+--.| +.|||.|-.|+. .+ -+|.||++.++++.
T Consensus 19 ~pENTl~Af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~~iptL~evl~~~~~~~- 96 (238)
T 3no3_A 19 SAQNSIRSLERASEIGAYGSEFDVHLTAD-NVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLK- 96 (238)
T ss_dssp CCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEETTEEGGGSCHHHHTTCBCTTSCBCCBHHHHHHHHHHCT-
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCCCCCChHhCCHHHHhhCCCCCCCcCCcHHHHHHHHhhcC-
Confidence 34789999999999999999999997555 479999998873 23 46999999998641
Q ss_pred ccCCCceEEEecCCCC
Q 007473 195 SASPYPVILTFEDHLN 210 (602)
Q Consensus 195 ~~S~yPvILSlE~Hcs 210 (602)
. +.|-||.-..
T Consensus 97 ---~--~~l~iEiK~~ 107 (238)
T 3no3_A 97 ---N--IRLIFELKSH 107 (238)
T ss_dssp ---T--CEEEEEECCC
T ss_pred ---C--ceEEEEeCCC
Confidence 1 4566676554
|
| >3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0061 Score=60.78 Aligned_cols=67 Identities=15% Similarity=0.243 Sum_probs=51.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc--------------------------------cc-chH
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT--------------------------------TP-VEL 182 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--------------------------------s~-i~f 182 (602)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+. -+ .+|
T Consensus 22 ~pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~~iptL 100 (252)
T 3qvq_A 22 APENTLASLHLAGQQGIKWVEIDVMLSGD-GIPVIFHDDYLSRTTDGDGLIYKTPLAELKQLDAGSWKGQEYQQETIPTL 100 (252)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECCCSBSTTTSSCCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBH
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CcEEEECCCccccccCCCceeecCcHHHHhcCCCCCccCccCCCCcCcCH
Confidence 44788999999999999999999996555 469999988763 12 459
Q ss_pred HHHHHHHhhcccccCCCceEEEecCCCC
Q 007473 183 IKCLRAIKENAFSASPYPVILTFEDHLN 210 (602)
Q Consensus 183 ~dvi~aI~~~AF~~S~yPvILSlE~Hcs 210 (602)
+||++.++++ .+.|-||.-..
T Consensus 101 ~evl~~~~~~-------~~~l~iEiK~~ 121 (252)
T 3qvq_A 101 LEAIEVISQY-------GMGLNLELKPC 121 (252)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCC
T ss_pred HHHHHHHhcc-------CcEEEEEecCC
Confidence 9999988753 24566666654
|
| >1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.005 Score=60.25 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc-----------------ccchHHHHHHHHhhcccccCC
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT-----------------TPVELIKCLRAIKENAFSASP 198 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt-----------------s~i~f~dvi~aI~~~AF~~S~ 198 (602)
.-+-|.++|.+|+..||..||+|++=-.| +.|||.|-.|+. .--+|+||++.+++ .
T Consensus 20 ~PENTl~Af~~A~~~G~d~iE~DV~lT~D-g~lVv~HD~~l~~g~v~~~t~~eL~~l~~~iptL~evl~~~~~------~ 92 (224)
T 1vd6_A 20 AKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEA------F 92 (224)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGT------C
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEecC-CcEEEECCCccCCCChhhCCHHHHHhcCCCCCCHHHHHHhhhc------c
Confidence 34789999999999999999999995445 469999999984 22359999987763 1
Q ss_pred CceEEEecCCC
Q 007473 199 YPVILTFEDHL 209 (602)
Q Consensus 199 yPvILSlE~Hc 209 (602)
.-+.|-||.-.
T Consensus 93 ~~~~l~iEiK~ 103 (224)
T 1vd6_A 93 PQAVFNVELKS 103 (224)
T ss_dssp TTCEEEEEECC
T ss_pred CCceEEEEECC
Confidence 23556666544
|
| >2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.012 Score=58.40 Aligned_cols=80 Identities=20% Similarity=0.228 Sum_probs=56.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc--------------------------------c-chHH
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT--------------------------------P-VELI 183 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts--------------------------------~-i~f~ 183 (602)
=+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+.. + -+|+
T Consensus 20 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~g~~~~~~~~~~~iptL~ 98 (247)
T 2otd_A 20 PENTLAAIDVGAKYGHKMIEFDAKLSKD-GEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLS 98 (247)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBSSTTSSCCSBGGGSCHHHHTTCCSSTTTCGGGTTCCCCBHH
T ss_pred CchhHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCccccCCCCccHhhCcHHHHhhCCCCCccCCCCCCCcCCCHH
Confidence 4789999999999999999999996545 4699999988621 1 3699
Q ss_pred HHHHHHhhcccccCCCceEEEecCCCCHH----HHHHHHHHHHHH
Q 007473 184 KCLRAIKENAFSASPYPVILTFEDHLNPH----LQAKVAQMITQT 224 (602)
Q Consensus 184 dvi~aI~~~AF~~S~yPvILSlE~Hcs~~----qQ~~ma~~l~~~ 224 (602)
||++.+++. .+.|-||.--... --..+++.+++.
T Consensus 99 evl~~~~~~-------~~~l~iEiK~~~~~~~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 99 QVAERCREH-------GMMANIEIKPTTGTGPLTGKMVALAARQL 136 (247)
T ss_dssp HHHHHHHHT-------TCEEEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-------CCEEEEEECCCCCcchHHHHHHHHHHHHH
Confidence 999988753 2455666543321 123556666654
|
| >3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.016 Score=57.65 Aligned_cols=65 Identities=22% Similarity=0.261 Sum_probs=51.2
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc----------------------------ccchHHHHHHH
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT----------------------------TPVELIKCLRA 188 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt----------------------------s~i~f~dvi~a 188 (602)
-+-|.+++..|+..||+.||+||+=-.| +.+||.|-.|+. .--+|+||++.
T Consensus 16 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~iptL~evl~~ 94 (250)
T 3ks6_A 16 GDSTPHGFTATAAMALEEVEFDLHPTAD-GAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRYGAGSHPMTLEELCAL 94 (250)
T ss_dssp CTTCHHHHHHHHTSSSSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHHHCCBTTSTTCCCEEHHHHHHH
T ss_pred CcchHHHHHHHHHcCCCEEEEEEeEccC-CCEEEECCCccccccCCCCeeecCcHHHHhcCCCCCCCCccCcCHHHHHHH
Confidence 4788999999999999999999996445 469999998873 12358899988
Q ss_pred HhhcccccCCCceEEEecCCC
Q 007473 189 IKENAFSASPYPVILTFEDHL 209 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hc 209 (602)
+++ ..+.|-||.-.
T Consensus 95 ~~~-------~~~~l~iEiK~ 108 (250)
T 3ks6_A 95 YVD-------SHVNFRCEIKP 108 (250)
T ss_dssp HTT-------CSCEEEEEECC
T ss_pred Hhc-------cCcEEEEEeCC
Confidence 875 24677777765
|
| >1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0081 Score=59.27 Aligned_cols=64 Identities=20% Similarity=0.310 Sum_probs=50.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc----------------------ccc-hHHHHHHHHhhc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT----------------------TPV-ELIKCLRAIKEN 192 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt----------------------s~i-~f~dvi~aI~~~ 192 (602)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .+| +|+||++.++..
T Consensus 25 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~Rtt~~~g~v~d~T~~eL~~l~~~~iptL~evL~~~~~~ 103 (234)
T 1o1z_A 25 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDLKRLFGLDVKIRDATVSELKELTDGKITTLKEVFENVSDD 103 (234)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEEHHHHCEEEEGGGSCHHHHHHHTTTCCCBHHHHHHHSCTT
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeEecC-CCEEEEcCCcHHhcCCcCcCcccCcHHHHhcCCCCCCCCHHHHHHhcccC
Confidence 34779999999999999999999997555 579999999873 133 599999988762
Q ss_pred ccccCCCceEEEecCC
Q 007473 193 AFSASPYPVILTFEDH 208 (602)
Q Consensus 193 AF~~S~yPvILSlE~H 208 (602)
+.|-||.-
T Consensus 104 --------~~l~iEiK 111 (234)
T 1o1z_A 104 --------KIINIEIK 111 (234)
T ss_dssp --------SEEEEEEC
T ss_pred --------CeEEEEeC
Confidence 34556654
|
| >2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.014 Score=58.29 Aligned_cols=66 Identities=21% Similarity=0.335 Sum_probs=50.9
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecc---cccc-------------------------c-chHHHHHH
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGR---TLTT-------------------------P-VELIKCLR 187 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~---Tlts-------------------------~-i~f~dvi~ 187 (602)
=+-|.++|..|+..||..||+||+=-.| +.|||.|-. |+.. + .+|+||++
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~ 100 (258)
T 2o55_A 22 PENTLRSFVLCMERNIPYIETDLRVCKT-GEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFV 100 (258)
T ss_dssp CTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHH
T ss_pred CccHHHHHHHHHHcCcCEEEEEEEEecC-CeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHH
Confidence 4778999999999999999999996445 469999999 8731 2 36899999
Q ss_pred HHhhcccccCCCceEEEecCC
Q 007473 188 AIKENAFSASPYPVILTFEDH 208 (602)
Q Consensus 188 aI~~~AF~~S~yPvILSlE~H 208 (602)
.++++. .-+.|-||.-
T Consensus 101 ~~~~~~-----~~~~l~iEiK 116 (258)
T 2o55_A 101 AIEEQK-----FNLKLNLELK 116 (258)
T ss_dssp HHHHSC-----SCCEEEEEEC
T ss_pred Hhhhhc-----CceEEEEEEc
Confidence 988752 2355666653
|
| >3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.02 Score=58.20 Aligned_cols=64 Identities=19% Similarity=0.352 Sum_probs=50.9
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc--------------------------------ccchH
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT--------------------------------TPVEL 182 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--------------------------------s~i~f 182 (602)
..-+.|.++|..|+..||..||+||+=-.| +.|||.|-.|+. .--+|
T Consensus 29 ~~pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL 107 (278)
T 3i10_A 29 SAPENSTAAIDSAIAMKVDIVEIDIQKTKD-GQLILMHDNTLDRTTTGKGEIKNWTLADIKKLKLKDKDGKVTNYVVPTL 107 (278)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHTTSCBBCTTSCBCSCCCCBH
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CeEEEecCcchhhcCCCCceeecCcHHHHhcCCCCCCCcccCCCCCCCH
Confidence 345889999999999999999999997655 469999988773 12358
Q ss_pred HHHHHHHhhcccccCCCceEEEecC
Q 007473 183 IKCLRAIKENAFSASPYPVILTFED 207 (602)
Q Consensus 183 ~dvi~aI~~~AF~~S~yPvILSlE~ 207 (602)
+||++.++. .++|-||.
T Consensus 108 ~evl~~~~~--------~~~~nie~ 124 (278)
T 3i10_A 108 EEALLTAKG--------KIMVNLDK 124 (278)
T ss_dssp HHHHHHHTT--------TSEEEEES
T ss_pred HHHHHHhcC--------CeEEEEec
Confidence 888887764 37888885
|
| >2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.01 Score=59.03 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+
T Consensus 24 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 63 (252)
T 2pz0_A 24 VPENTIAAFKRAMELGADGIELDVQLTKD-GHLVVIHDETV 63 (252)
T ss_dssp SCTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEecC-CeEEEEcCCcc
Confidence 34778999999999999999999995445 46999999886
|
| >3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.035 Score=55.62 Aligned_cols=41 Identities=29% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.=+-|.++|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 21 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 61 (272)
T 3ch0_A 21 LPENTIAAFTKALLLGVTTLEFDLVISKD-NRVVVSHDTFFH 61 (272)
T ss_dssp SSTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBCC
T ss_pred CCcccHHHHHHHHHcCCCEEEEeeeEcCC-CcEEEeCCCccc
Confidence 34789999999999999999999996555 469999998873
|
| >3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.057 Score=55.43 Aligned_cols=41 Identities=22% Similarity=0.261 Sum_probs=34.9
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
..-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 29 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~~Vv~HD~~l 69 (313)
T 3l12_A 29 VMPENTLEGFAFTLAAGVRALEFDVVMTAD-GVPVVTHNHHL 69 (313)
T ss_dssp TSCTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECSSSBC
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEECCchh
Confidence 344789999999999999999999996555 46999998875
|
| >3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.032 Score=57.00 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|.++|..|+..||..||+|||--.| +.+||.|-.|+.
T Consensus 46 pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~Vv~HD~~l~ 85 (292)
T 3mz2_A 46 PENSMETFENTLSYTPATFEIDPRLTKD-SVIVLFHDDTLE 85 (292)
T ss_dssp CTTCHHHHHHHHHHCCCEEEECEEECTT-CCEEECCSSSST
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeECCC-CcEEEECCchhc
Confidence 4788999999999999999999997655 469999988763
|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A | Back alignment and structure |
|---|
Probab=94.76 E-value=0.18 Score=59.85 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=68.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeec---CCccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~Lr 542 (602)
..++|+|+++.++..+ .....+.||++.+......- ...+|+.+. ..+|.|||.++|++.. |-.|.|.
T Consensus 355 ~~f~v~i~~~~~~n~~-------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~ 426 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-------IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLC 426 (1091)
T ss_dssp SEEEEEEEEESCCCCC-------CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEE
T ss_pred CCEEEEEEEecCCCCC-------ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEE
Confidence 4689999999877532 11235679999987422222 223444332 3478899999999874 5568999
Q ss_pred EEEEecCCC----CCCCccEEEEEeCC----CccCccEEEEcc
Q 007473 543 VEVRKYSMP----EKDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~----~~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
|+||+.... .....||++.++|- .|++|-..+.|.
T Consensus 427 ~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW 469 (1091)
T 3hhm_A 427 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 469 (1091)
T ss_dssp EEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECE
T ss_pred EEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEee
Confidence 999986532 12357999999985 577897766653
|
| >1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=94.07 E-value=0.041 Score=54.53 Aligned_cols=40 Identities=28% Similarity=0.388 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
=+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 54 (248)
T 1zcc_A 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETLD 54 (248)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBTT
T ss_pred CchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCccc
Confidence 4778999999999999999999995445 469999999874
|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.21 Score=58.68 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=68.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeec---CCccEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALL 541 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~L 541 (602)
...++|+|.++.++... ...+.||++.+......- ....|+.+.-..+|.|||.++|++.. |-.|.|
T Consensus 216 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L 286 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL 286 (940)
T ss_dssp CSEEEEEEEEEECCCC------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred CCceEEEEEEecccCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence 34699999999887531 225679999887322111 12344444435679999999999875 545899
Q ss_pred EEEEEecCCC--C----------CCCccEEEEEeCCC----ccCccEEEEcc
Q 007473 542 RVEVRKYSMP--E----------KDEFAGQTCLPVFQ----LRPGIHAVPLF 577 (602)
Q Consensus 542 rf~V~D~d~~--~----------~dd~lGq~~lpL~~----L~~GyR~ipL~ 577 (602)
.|+||+.... + ....+|++.+||-. |++|...+.|.
T Consensus 287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 338 (940)
T 2wxf_A 287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMW 338 (940)
T ss_dssp EEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECE
T ss_pred EEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEe
Confidence 9999996321 1 13489999999764 67897776664
|
| >1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A* | Back alignment and structure |
|---|
Probab=93.17 E-value=0.042 Score=55.45 Aligned_cols=42 Identities=14% Similarity=0.040 Sum_probs=36.6
Q ss_pred cccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007473 129 YLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175 (602)
Q Consensus 129 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 175 (602)
|.+|+. +-|.++|..|+..||..||+||+= .| +.|||.|-.|
T Consensus 8 ~iiaHr---ENTl~Af~~A~~~Gad~IE~DV~l-kD-G~lVv~HD~~ 49 (285)
T 1xx1_A 8 WNLAHM---VNAVAQIPDFLDLGANALEADVTF-KG-SVPTYTYHGT 49 (285)
T ss_dssp EEEESC---CCSTTHHHHHHHHTCSEEEEEEEE-ET-TEEEEEECCS
T ss_pred EEEEeh---hccHHHHHHHHHhCCCEEEEEEEE-EC-CEEEEEcCCc
Confidence 445554 889999999999999999999998 77 5799999998
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=93.07 E-value=0.31 Score=40.17 Aligned_cols=64 Identities=8% Similarity=0.200 Sum_probs=49.2
Q ss_pred hhHHHHHHHhhCCCC---ccCHHHHHHHHHHH----hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEGGT---HMTAEQLWQFLVEV----QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~~~---~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|..+.. .|+.++|+.+|+.+ -+. ..+.+.+.+++..+-.. +.+.+++++|..++.
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~d-------~dG~I~f~EF~~~~~ 79 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDSN-------GDGECDFQEFMAFVA 79 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHHHHHHHHHHCTT-------SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHHHHHHHHHHcCC-------CCCCCcHHHHHHHHH
Confidence 578899999984333 99999999999873 123 35788899999887522 346899999998875
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.98 E-value=0.098 Score=49.05 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=56.6
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLN 102 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n 102 (602)
...++..+|..|-.+ ...|+.++|..+|....+. .++.+++..++...-+... .-+.+.+++++|..+|.+....
T Consensus 112 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~~D---~d~dG~Is~~EF~~~~~~~~~~ 187 (202)
T 2bec_A 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV-QVTEEQLENIADRTVQEAD---EDGDGAVSFVEFTKSLEKMDVE 187 (202)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCS-CCCHHHHHHHHHHHHHHHC---SSCSSSEEHHHHHHTTTTSCHH
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcC---CCCCCcCcHHHHHHHHHHhCcc
Confidence 356788999999655 5789999999999986455 3688889999887321100 1134679999999999753211
Q ss_pred CCCCCCCCcCCCCcc
Q 007473 103 PPLGNQVYQDMTAPL 117 (602)
Q Consensus 103 ~~~~~~v~qdM~~PL 117 (602)
.......-+++++|+
T Consensus 188 ~~~~~~~~~~~~~~~ 202 (202)
T 2bec_A 188 QKMSIRILKHHHHHH 202 (202)
T ss_dssp HHTSCTTTC------
T ss_pred ceEEEeecCCccCCC
Confidence 111222345676664
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=92.97 E-value=0.089 Score=50.65 Aligned_cols=102 Identities=12% Similarity=0.172 Sum_probs=61.0
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHH---HHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLV---EVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~---~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
...++..+|..|-.+ ...|+.++|..+|. ...+. ..+.+++.+++.+.-+... .-+.+.+++++|..+|.+.
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~~D---~d~dG~I~~~EF~~~~~~~ 195 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTVIEDIIDKTFEEAD---TKHDGKIDKEEWRSLVLRH 195 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHHC---SSCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHhC---CCCCCcCcHHHHHHHHHhC
Confidence 345789999999655 58899999999997 34565 4688888888764332111 1134679999999999853
Q ss_pred CC-CCCCCCCCCcCCCCcccccccccCCccc
Q 007473 100 DL-NPPLGNQVYQDMTAPLSHYFIYTGHNSY 129 (602)
Q Consensus 100 ~~-n~~~~~~v~qdM~~PLs~YfI~SSHNTY 129 (602)
.. ...+.....++.+.....|...|.||||
T Consensus 196 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 226 (226)
T 2zfd_A 196 PSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 226 (226)
T ss_dssp GGGGGGGCCGGGGGHHHHC------------
T ss_pred hHHHHHhchHHhhchhhcchhHHhhhhhccC
Confidence 21 0112344567888899999999999987
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=92.83 E-value=0.35 Score=41.16 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=50.7
Q ss_pred hhHHHHHHHhh-CC-C-CccCHHHHHHHHHHHh----CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYA-EG-G-THMTAEQLWQFLVEVQ----GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~-~~-~-~~l~~~~~~~Fl~~~Q----~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+|..+|+.|. .+ . ..||.++|+.+|+.+= ++ ..+.+++.++|..+-.. +.+.+++++|..+|.+
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~-~~~~~ev~~~i~~~D~d-------gDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNKFMSVLDTN-------KDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCC-TTCHHHHHHHHHHHHHC-------CCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHH
Confidence 57899999997 33 3 7999999999998643 23 36788899999987532 3468999999988763
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.73 E-value=0.4 Score=40.96 Aligned_cols=65 Identities=11% Similarity=0.228 Sum_probs=49.6
Q ss_pred hhHHHHHHHhh-CCC--CccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG--THMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~--~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|. .++ ..|+.++|+.+|+.+=++ ...+.+++.++|..+-.. +.+.+++++|+.+|.
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d-------gDG~Idf~EF~~~m~ 83 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSN-------RDNEVDFQEYCVFLS 83 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCC-------CCCCCcHHHHHHHHH
Confidence 57889999997 333 599999999999863321 125788899999986522 346899999998875
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=92.44 E-value=0.44 Score=39.69 Aligned_cols=65 Identities=11% Similarity=0.228 Sum_probs=48.8
Q ss_pred hhHHHHHHHhh-CCC--CccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG--THMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~--~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|. .++ ..|+.++|+.+|+.+=++ ...+.+.+.++|..+-.. +.+.+++++|..+|.
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d-------~DG~Idf~EF~~~~~ 80 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN-------RDNEVDFQEYCVFLS 80 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTT-------SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCC-------CCCCCcHHHHHHHHH
Confidence 57899999997 343 599999999999863221 124778899999886522 346899999998875
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.62 Score=38.36 Aligned_cols=67 Identities=10% Similarity=0.273 Sum_probs=53.0
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
....++..+|..|-.+ ...|+.++|...|+... . ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~-~~~~~e~~~l~~~~D~d-------~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID-------GDGQVNYEEFVQMMTA 93 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHhc
Confidence 4567899999999654 57899999999998764 3 36888899999887522 2467999999998863
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=91.98 E-value=0.49 Score=41.23 Aligned_cols=65 Identities=17% Similarity=0.367 Sum_probs=52.6
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++..+|..|-.+ ...|+.++|..+|....+.. .+.+++..++..+... +.+.+++++|..+|.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~d~~-------~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQ-VGHRDIEEIIRDVDLN-------GDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC-CCHHHHHHHHHHHCSS-------SSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC-CCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHh
Confidence 46788999999654 58999999999999867664 7888999999987522 346799999999873
|
| >1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A | Back alignment and structure |
|---|
Probab=91.94 E-value=0.12 Score=53.96 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=35.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
.=+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+..
T Consensus 43 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~r 84 (356)
T 1ydy_A 43 LPEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLDR 84 (356)
T ss_dssp SSTTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCTT
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeEECCC-CcEEEeCCChHHh
Confidence 34789999999999999999999996555 4699999998743
|
| >2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A | Back alignment and structure |
|---|
Probab=91.63 E-value=0.15 Score=51.61 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=33.6
Q ss_pred CCCChHHHHHH-HhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 137 SDCSDVPITKA-LKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 137 g~Ss~e~Y~~a-L~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
=+-|.++|..| +..||..||+||+=-.| +.|||.|-.|+
T Consensus 37 PENTl~Af~~A~~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 76 (287)
T 2oog_A 37 PEHTFQAYDKSHNELKASYIEIDLQRTKD-GHLVAMHDETV 76 (287)
T ss_dssp CSSSHHHHHHHHHTSCCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CchhHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCChh
Confidence 47789999999 68999999999995445 46999999987
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=91.53 E-value=0.33 Score=44.65 Aligned_cols=70 Identities=14% Similarity=0.245 Sum_probs=50.9
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhcccccc-ccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIAR-FTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~-~~~~~l~~~gF~~~L~S 98 (602)
+.++..+|..|-.+ ...|+.++|+.+|. +. .++.+++..++..+......... -+.+.+++++|..+|.+
T Consensus 107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~---~~-~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 107 STFLKAAFNKIDKDEDGYISKSDIVSLVH---DK-VLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp -CHHHHHHHHHCTTCSSCBCHHHHHHHTT---TS-SCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHc---CC-CCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 46899999999654 58899999999998 33 57889999999988732110000 01167999999999986
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=91.50 E-value=0.54 Score=36.64 Aligned_cols=64 Identities=11% Similarity=0.297 Sum_probs=50.9
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+.++..+|..|-.+ ...|+.++|...|.... ..+.+++..++..+... +.+.+++++|..++..
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~-------~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTD-------GDGFIDFNEFISFCNA 66 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH---TCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC---CCCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHHHH
Confidence 46899999999655 57899999999999875 36788899999887522 2467999999999864
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=91.46 E-value=0.28 Score=37.89 Aligned_cols=65 Identities=17% Similarity=0.408 Sum_probs=50.1
Q ss_pred CchhHHHHHHHh-h-CCC-CccCHHHHHHHHHHHhCCCCC--CHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKY-A-EGG-THMTAEQLWQFLVEVQGHGGV--SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~-~-~~~-~~l~~~~~~~Fl~~~Q~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+..++..+|..| - .+. ..|+.++|...|..... .. +.+++..++..+... +.+.+++++|..++.
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~l~~~~D~~-------~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP--SLLKGMSTLDEMIEEVDKN-------GDGEVSFEEFLVMMK 72 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG--GSCTTSCSHHHHHHHHCTT-------CSSEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC--CcCCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHH
Confidence 457899999999 3 446 78999999999998742 24 667788888887522 246799999998875
|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=91.28 E-value=0.25 Score=58.77 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=65.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
..++|+|.++.++... ...+.||++.+......- ....|+.+.-..+|.|||.++|++...+ .|.|.
T Consensus 353 ~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~ 423 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLC 423 (1092)
T ss_dssp SEEEEEECCCCCCCCC---------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEE
T ss_pred CCEEEEEEEeccCCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEE
Confidence 4699999999887531 224678888776321111 1234554444567999999999987544 48999
Q ss_pred EEEEecCCC----------------------CCCCccEEEEEeCCC----ccCccEEEEcc
Q 007473 543 VEVRKYSMP----------------------EKDEFAGQTCLPVFQ----LRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~----------------------~~dd~lGq~~lpL~~----L~~GyR~ipL~ 577 (602)
|+||+.... .....+|++.++|-. |++|...+.|.
T Consensus 424 ~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 484 (1092)
T 2y3a_A 424 FAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSW 484 (1092)
T ss_dssp EECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCC
T ss_pred EEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEe
Confidence 999985311 012388999998764 67887776664
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.26 E-value=0.48 Score=39.95 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=50.0
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..||+..|+.|=.+ ...|+.++|+..|+.. +. ..+.+++.+++..+-.. +.+.+++++|+..|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~ei~~l~~~~D~d-------~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GY-MPNEVELEVIIQRLDMD-------GDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TC-CCCTTTHHHHHHHHCSS-------CSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHHCCC-------CCCeEeHHHHHHHhC
Confidence 45788889999544 5899999999999875 44 36788899999987522 346799999998763
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.14 E-value=0.21 Score=44.17 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=49.8
Q ss_pred hhHHHHHHHhhCCCCccCHHHHHHHHHHH----hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEGGTHMTAEQLWQFLVEV----QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~~~~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|+.|..+...||.++|+..|+.+ =+. ..+.+.+.++|...-.. +.+.+++++|..+|.
T Consensus 15 e~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~~i~~~D~d-------~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 15 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQC-------RDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHHHHHHHCTT-------CSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHHHHHHHcCC-------CCCcCcHHHHHHHHH
Confidence 46788899999888999999999998752 122 35678899999886522 346899999999875
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=90.76 E-value=0.56 Score=35.06 Aligned_cols=62 Identities=11% Similarity=0.279 Sum_probs=48.9
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
++..+|..|-.+ ...|+.++|...|.... . ..+.+++..++..+... +.+.+++++|..++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~D~~-------~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFS-P-YFTQEDIVKFFEEIDVD-------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTC-T-TSCHHHHHHHHHHHCCS-------SSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 578899999654 58899999999998753 3 36788899999887522 246799999999886
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=89.95 E-value=0.77 Score=38.21 Aligned_cols=66 Identities=11% Similarity=0.195 Sum_probs=52.2
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...++..+|..|-.+ ...|+.++|..+|.... +. ..+.+++..++..+... +.+.+++++|..++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR-ALTDAETKAFLKAGDSD-------GDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCC-CCCHHHHHHHHHHHCTT-------CSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHh
Confidence 457899999999655 57899999999999873 33 36888999999887522 246799999999875
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=89.77 E-value=1.6 Score=35.12 Aligned_cols=64 Identities=8% Similarity=0.195 Sum_probs=49.8
Q ss_pred chhHHHHHHHhh-CC-CC-ccCHHHHHHHHHH-----HhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 25 PADVKEMFKKYA-EG-GT-HMTAEQLWQFLVE-----VQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 25 r~el~~if~~~~-~~-~~-~l~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
..++..+|..|- .+ .. .|+.++|...|.. ... ..+.+++..++..+... +.+.+++++|..++
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~--~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~ 78 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV--QKDADAVDKIMKELDEN-------GDGEVDFQEFVVLV 78 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC--CCCHHHHHHHHHHHHHC-------TTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHH
Confidence 357889999996 34 46 8999999999987 443 36788899999887632 24679999999887
Q ss_pred c
Q 007473 97 F 97 (602)
Q Consensus 97 ~ 97 (602)
.
T Consensus 79 ~ 79 (93)
T 1k2h_A 79 A 79 (93)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=89.56 E-value=0.98 Score=38.12 Aligned_cols=65 Identities=11% Similarity=0.192 Sum_probs=47.9
Q ss_pred hhHHHHHHHhhCC----CCccCHHHHHHHHHHHhCCCC---CCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG----GTHMTAEQLWQFLVEVQGHGG---VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~----~~~l~~~~~~~Fl~~~Q~~~~---~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|..+ ...|+.++|+..|+..=++.. .+.+.+.++|..+-.. +.+.+++++|..+|.
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d-------~DG~Idf~EF~~~m~ 82 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDAN-------HDGRISFDEYWTLIG 82 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCC-------SSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHH
Confidence 5789999999753 489999999999987543321 1256688888775421 346899999999885
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=89.05 E-value=1 Score=36.23 Aligned_cols=64 Identities=16% Similarity=0.327 Sum_probs=49.8
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++..+|..|-.+ ...|+.++|..+|+... . ..+.+++..++..+... +.+.+++++|..++.
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~l~~~~D~~-------~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLG-Q-NPTKEELDAIIEEVDED-------GSGTIDFEEFLVMMV 83 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCTT-------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHH
Confidence 35678889998654 57899999999998753 3 46788899999887522 246799999998875
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=88.99 E-value=1.2 Score=39.12 Aligned_cols=65 Identities=14% Similarity=0.339 Sum_probs=50.1
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...|+.++|+.+|... +. .++.+++..++..+... +.+.+++++|..+|.+
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~d-------~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNL-GE-KLTDDEVDEMIREADID-------GDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS-------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHcc
Confidence 35678889888544 5789999999999865 33 47888999999887521 2467999999999875
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=88.81 E-value=1.1 Score=38.97 Aligned_cols=67 Identities=10% Similarity=0.222 Sum_probs=49.4
Q ss_pred chhHHHHHHHhh-CCC-C-ccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYA-EGG-T-HMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~-~~~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+|..+|..|. .++ . .|+.++|+.+|+.+-++ ...+.+++.++|..+-.. +.+.+++++|+.+|..
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~d-------gdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN-------RDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSS-------SSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHHH
Confidence 357889999997 444 3 89999999999863221 125677899999886522 2467999999988763
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=88.78 E-value=1.4 Score=40.75 Aligned_cols=72 Identities=14% Similarity=0.248 Sum_probs=53.8
Q ss_pred CCccCCCCchhHHHHHHHhh-CCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHH
Q 007473 17 HKVAEAGPPADVKEMFKKYA-EGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHY 95 (602)
Q Consensus 17 ~~~~~~~~r~el~~if~~~~-~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~ 95 (602)
..+....++.+|..+|..+- .+...|+.++|..+|. ..+. ..+.+.+..++..+... +.+.+++++|..+
T Consensus 18 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~~~-~~~~~~~~~l~~~~D~d-------~dG~I~~~EF~~~ 88 (191)
T 1y1x_A 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALS-SAGV-PFSLATTEKLLHMYDKN-------HSGEITFDEFKDL 88 (191)
T ss_dssp TTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHC-BTTB-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcCC-CCCHHHHHHHHHHhCCC-------CCCeEcHHHHHHH
Confidence 34455566889999999995 4468999999999993 2222 46788889998887522 2467999999988
Q ss_pred hc
Q 007473 96 LF 97 (602)
Q Consensus 96 L~ 97 (602)
+.
T Consensus 89 ~~ 90 (191)
T 1y1x_A 89 HH 90 (191)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=88.75 E-value=1.1 Score=37.17 Aligned_cols=67 Identities=15% Similarity=0.239 Sum_probs=53.1
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
....++..+|..|-.+ ...|+.++|..+|.... +. ..+.+++..++..+... +.+.+++++|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDSD-------HDGKIGADEFAKMVA 107 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 3567899999999654 58999999999999763 44 46888899999887522 346799999999885
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=88.62 E-value=1.2 Score=39.75 Aligned_cols=65 Identities=9% Similarity=0.283 Sum_probs=49.3
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+.++..+|..|-.+ ...|+.++|..+|.... . .++.+++..++..+... +.+.+++++|..+|..
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELG-E-NLTEEELQEMIAEADRN-------DDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCCS-------SSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC-C-CCCHHHHHHHHHHhCCC-------CCCCEeHHHHHHHHHh
Confidence 35677888888644 57899999999998643 3 47888899998887522 3467999999999964
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=88.58 E-value=0.69 Score=39.60 Aligned_cols=65 Identities=9% Similarity=0.189 Sum_probs=47.7
Q ss_pred hhHHHHHHHhh-CCC--CccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG--THMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|. .++ ..|+.++|..+|+..-++...+.+++.++|..+... +.+.+++++|..+|.
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d-------~dG~Idf~EF~~~~~ 89 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVN-------QDSELKFNEYWRLIG 89 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCC-------CCCCCcHHHHHHHHH
Confidence 57889999997 443 589999999999864443222345788888876522 246799999998875
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=88.50 E-value=0.8 Score=38.05 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=51.3
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...++..+|..|-.+ ...|+.++|..+|.... +. ..+.+++..++..+... +.+.+++++|..++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR-ALTDAETKAFLADGDKD-------GDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHh
Confidence 467899999999654 57899999999998652 33 46888899999887522 246799999998875
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=88.10 E-value=1 Score=37.28 Aligned_cols=67 Identities=10% Similarity=0.144 Sum_probs=50.4
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
...+|..+|..|-.+ ...|+.++|...|.... . ..+.+++..++..+... +.+.+++++|..+|.+.
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~e~~~l~~~~d~~-------~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRV-Q-ILTDEQFDRLWNEMPVN-------AKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHTTSCBC-------TTSCBCHHHHHHHHC--
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCCC-------CCCCCcHHHHHHHHhcc
Confidence 346889999999654 58899999999998764 3 36788888888765311 24679999999999754
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=88.00 E-value=1.2 Score=38.88 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=52.6
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|..+|....+. ..+.+++..++..+..... .-+.+.+++++|..+|.+
T Consensus 73 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~D---~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 73 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVDKTIINAD---KDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHHHC---TTSSSSBCHHHHHHHHGG
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHhC---CCCCCcCcHHHHHHHHhc
Confidence 346788999999655 4789999999999985555 3688889988887321110 113467999999999975
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=87.97 E-value=1.1 Score=38.70 Aligned_cols=62 Identities=16% Similarity=0.359 Sum_probs=46.9
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..|-.+ ...|+.++|..+|... +. ..+.+++..++..+. . +.+.+++++|..+|.
T Consensus 84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d-~-------~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI-GE-KLTDAEVDEMLREVS-D-------GSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHS-S-------SCSSEEHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHc-CC-CCCHHHHHHHHHHhc-C-------CCCcCcHHHHHHHHh
Confidence 5677888888543 5789999999999854 33 467888888888874 2 246799999998874
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=87.80 E-value=1.3 Score=36.77 Aligned_cols=68 Identities=15% Similarity=0.257 Sum_probs=53.0
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
....++..+|+.|-.+ ...|+.++|..+|...- +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAGDKD-------GDGKIGVEEFSTLVAE 108 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHHT
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCC-CCCHHHHHHHHHHHCCC-------CCCcCCHHHHHHHHHc
Confidence 3467899999999655 58899999999999863 33 36888899999887522 2467999999998853
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=87.55 E-value=0.55 Score=39.07 Aligned_cols=67 Identities=15% Similarity=0.332 Sum_probs=51.7
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|..+|.... +. ..+.+++..++..+... +.+.+++++|..+|.|
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~s 108 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR-ELTESETKSLMDAADND-------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCCS-------SSSSEEHHHHHHHHTC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHcC
Confidence 467889999999654 57899999999998653 33 46788899999887522 2467999999998853
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=87.54 E-value=1.2 Score=38.32 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=51.6
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...|+.++|+.+|.... . .++.+++..++..+.. +.+.+++++|..+|.+
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~--------~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLG-E-KLSNEEMDELLKGVPV--------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHH-S-CSCHHHHHHHHHHTTC--------SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC-C-CCCHHHHHHHHHhccC--------CCCcEeHHHHHHHHhc
Confidence 47899999999655 57899999999999764 3 3688889999988652 3467999999999874
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=87.34 E-value=1.4 Score=38.68 Aligned_cols=65 Identities=15% Similarity=0.323 Sum_probs=49.8
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+.++..+|..+-.+ ...|+.++|+.+|... +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~d~~-------~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN-------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHhh
Confidence 45688889988644 5889999999999754 33 46788899998887522 2467999999999864
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=87.23 E-value=0.84 Score=39.81 Aligned_cols=64 Identities=13% Similarity=0.258 Sum_probs=51.8
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+.++..+|..|-.+ ...|+.++|+.+|... +. .++.+++..++..+ . +.+.+++++|..+|.+
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~-d--------~dg~i~~~eF~~~l~~ 146 (146)
T 2qac_A 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-GD-ALTDQEAIDALNAF-S--------SEDNIDYKLFCEDILQ 146 (146)
T ss_dssp CHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHH-C--------SSSEEEHHHHHHHHTC
T ss_pred hHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHc-C--------CCCcCcHHHHHHHHhC
Confidence 467899999999655 4789999999999864 44 47889999999987 2 2467999999999863
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=87.15 E-value=2.1 Score=36.63 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=48.5
Q ss_pred hhHHHHHHHhhC-C-CC-ccCHHHHHHHHHHHhCCC--C--CCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE-G-GT-HMTAEQLWQFLVEVQGHG--G--VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~-~-~~-~l~~~~~~~Fl~~~Q~~~--~--~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|.. + .. .|+.++|+.+|+..-+.. . .+.+.+..++..+-.. +.+.+++++|..+|.
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d-------~dG~I~f~EF~~~~~ 83 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTN-------ADKQLSFEEFIMLMA 83 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCC-------CCCCEeHHHHHHHHH
Confidence 578889999984 5 45 899999999998443331 1 4677888898876522 246799999998875
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=87.14 E-value=0.95 Score=41.31 Aligned_cols=64 Identities=16% Similarity=0.257 Sum_probs=50.8
Q ss_pred CchhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+.++..+|..+-. +...|+.++|..+|. +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 121 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---~~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 121 SRERLLAAFQQFDSDGSGKITNEELGRLFG---VT-EVDDETWHQVLQECDKN-------NDGEVDFEEFVEMMQK 185 (191)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHTT---SS-CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---cC-CCCHHHHHHHHHHhCCC-------CCCCCCHHHHHHHHHH
Confidence 45688999999954 458999999999998 44 46888999999987532 3467999999999863
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.02 E-value=1.2 Score=36.16 Aligned_cols=62 Identities=16% Similarity=0.308 Sum_probs=48.3
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++..+|..|-.+ ...|+.++|...|.... .+.+++..++..+... +.+.+++++|..++.
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~~~~~~D~d-------~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR----VRPADAEAVFQRLDAD-------RDGAITFQEFARGFL 88 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----CCHHHHHHHHHHHCTT-------CSSEECHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----cCHHHHHHHHHHhCCC-------CCCCEeHHHHHHHHH
Confidence 45788899999655 57899999999998642 5778889998887522 246799999998874
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=86.89 E-value=1 Score=34.68 Aligned_cols=63 Identities=11% Similarity=0.204 Sum_probs=49.1
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..|-.+ ...|+.++|...|+... . ..+.+++..++..+... +.+.+++++|..++.
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~~-------~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALG-F-DVKKPEILELMNEYDRE-------GNGYIGFDDFLDIMT 70 (77)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHHHHHT-C-CCHHHHHHHHHHHHCCS-------SSSEEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 5688899999654 57899999999999864 3 35778888888887521 245799999999875
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=86.88 E-value=1.3 Score=36.67 Aligned_cols=65 Identities=11% Similarity=0.280 Sum_probs=46.1
Q ss_pred hhHHHHHHHhh-CCC--CccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG--THMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~--~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|. .++ ..|+.++|+.+|+..-+. ...+.+.+.+++..+-.. +.+.+++++|...|.
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d-------~dG~I~f~EF~~~~~ 79 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN-------GDAQVDFSEFIVFVA 79 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSS-------SSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCC-------CCCcCCHHHHHHHHH
Confidence 57889999997 443 589999999999864322 124667788888876421 246799999998875
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=86.88 E-value=2.1 Score=37.80 Aligned_cols=67 Identities=13% Similarity=0.312 Sum_probs=52.4
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+..+|..+|..|=.+ ...|+.++|+..|... +. ..+.+++..++..+-.. +.+.+++++|++.|..
T Consensus 80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-g~-~~~~~e~~~l~~~~D~d-------~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINL-GE-KVTDEEIDEMIREADFD-------GDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCCS-------CCSSEEHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-Cc-cccHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHhc
Confidence 3456799999999654 5899999999999864 44 47889999999887522 3468999999988853
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=86.86 E-value=1.6 Score=35.09 Aligned_cols=65 Identities=18% Similarity=0.407 Sum_probs=50.7
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...|+.++|...|... +. ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~l~~~~d~~-------~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINL-GE-KLTDEEVEQMIKEADLD-------GDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS-------CCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHHh
Confidence 45788899999654 5789999999999875 33 36888899999887522 2467999999998874
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=86.82 E-value=1.2 Score=36.99 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=51.8
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
....++..+|..|-.+ ...|+.++|...|.... +. ..+.+++..++..+... +.+.+++++|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~~~D~~-------~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR-VLTSAETKAFLAAGDTD-------GDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc-cCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHh
Confidence 3567899999999655 58899999999998653 33 46888899999887522 346799999999874
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=86.62 E-value=1.2 Score=35.29 Aligned_cols=64 Identities=13% Similarity=0.318 Sum_probs=50.3
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...|+.++|...|.... ..+.+++..++..+... +.+.+++++|..++..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD-------GDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT-------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC---CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHH
Confidence 35788899999654 58899999999998654 46788899999887522 2467999999999874
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.58 E-value=0.93 Score=38.83 Aligned_cols=62 Identities=16% Similarity=0.198 Sum_probs=47.7
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.++..+|..|-.+ ...|+.++|+.+|+ +. ..+.+++..|+..+... +.+.+++++|..+|.
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~-~~~~~~~~~i~~~~D~d-------~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM---QS-SLPQAQLASIWNLSDID-------QDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TT-CCCHHHHHHHHHHHCSS-------CCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hC-CCCHHHHHHHHHHHCCC-------CCCCCcHHHHHHHHH
Confidence 46788889999654 57899999999998 33 46788888888876421 246799999998875
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=86.55 E-value=0.97 Score=37.61 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=47.7
Q ss_pred chhHHHHHHHhhCCCCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+|..+|..|......|+.++|...|+..-+. ...+.+.+..++..+... +.+.+++++|...|.
T Consensus 8 ~~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d-------~dG~I~f~EF~~~~~ 76 (96)
T 1a4p_A 8 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC-------RDGKVGFQSFFSLIA 76 (96)
T ss_dssp HHHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTT-------SSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 357889999997322499999999999863211 024667889999886522 246799999998875
|
| >3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.48 E-value=2 Score=41.84 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=32.1
Q ss_pred ccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEEEEecCC
Q 007473 510 KMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVRKYSM 550 (602)
Q Consensus 510 ~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~V~D~d~ 550 (602)
...+|-+...+-+|.|+|++...+..... +.|+|.++....
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 45678788888999999999888865443 789999987543
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=86.45 E-value=1.4 Score=38.83 Aligned_cols=68 Identities=16% Similarity=0.346 Sum_probs=53.6
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
..+.++..+|..|-.+ ...|+.++|+.+|... +. ..+.+++..++..+... +.+.+++++|..+|.+.
T Consensus 88 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~~~~ 156 (158)
T 2jnf_A 88 QMQQELREAFRLYDKEGNGYISTDVMREILAEL-DE-TLSSEDLDAMIDEIDAD-------GSGTVDFEEFMGVMTGG 156 (158)
T ss_dssp TTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH-CT-TCCHHHHHHHHHHHCSS-------CCSEECSHHHHHHTSSC
T ss_pred hHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-CC-cCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHhcc
Confidence 3456899999999655 5789999999999875 44 36888999999987522 24679999999999753
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=86.12 E-value=0.61 Score=36.10 Aligned_cols=66 Identities=18% Similarity=0.302 Sum_probs=48.2
Q ss_pred chhHHHHHHHhhC-C-CC-ccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAE-G-GT-HMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~-~-~~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++..+|..|-. + .. .|+.++|..+|+..-+....+.+.+..++..+... +.+.+++++|..++.
T Consensus 6 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~ 74 (78)
T 1cb1_A 6 PAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKN-------GDGEVSFEEFQVLVK 74 (78)
T ss_dssp HHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCC-------SSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCC-------CCCCCcHHHHHHHHH
Confidence 5689999999975 5 46 89999999999864443211556677788775421 246799999998874
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=86.00 E-value=1.4 Score=36.62 Aligned_cols=68 Identities=15% Similarity=0.274 Sum_probs=52.7
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
....++..+|..|-.+ ...|+.++|..+|.... +. ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~d~~-------~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADKD-------GDGKIGIDEFETLVHE 109 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHC
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHHHh
Confidence 3567899999999654 58899999999998652 33 46888899999887522 2467999999998853
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=85.86 E-value=0.66 Score=43.46 Aligned_cols=68 Identities=9% Similarity=0.070 Sum_probs=49.6
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
....+..+|+.|-.+ ...|+.++|..+|........++.+++..++..+... +.+.+++++|..+|.+
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d-------~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLN-------GDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCC-------CCCcCcHHHHHHHHHc
Confidence 346788999999654 5889999999999865322235677888888887522 3468999999999975
|
| >1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11 | Back alignment and structure |
|---|
Probab=85.84 E-value=2.2 Score=37.80 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=52.2
Q ss_pred chhHHHHHHHhhCC----CCccCHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG----GTHMTAEQLWQFLVEVQGH--GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~----~~~l~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-.+|+.+|..|+.. ...|+-.+|.+++++.+=- ..+|..++.-|+.++ .. ..+.|++++|..+|-
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k-------~~r~I~f~qF~~aL~ 91 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TG-------PKKKATFDETKKVLA 91 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TC-------SSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cC-------CcceecHHHHHHHHH
Confidence 36899999999853 3689999999999998854 357889999999998 32 235699999998874
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=85.81 E-value=1.1 Score=39.46 Aligned_cols=64 Identities=9% Similarity=0.209 Sum_probs=47.1
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++..+|..|-.+ ...|+.++|..+|.... . .++.+++..++..+... +.+.+++++|..+|.
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~~-------~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-E-TLTDEELRAMIEEFDLD-------GDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHTTCSS-------SSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHh
Confidence 46788888888544 47899999999988543 3 36788888888776421 246799999998875
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=85.66 E-value=2.2 Score=35.70 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=48.4
Q ss_pred hhHHHHHHHhh-CCC-C-ccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG-T-HMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|. .++ . .|+.++|+.+|+..-+. ...+.+.+..++..+-.. +.+.+++++|...|.
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d-------~dG~I~f~EF~~~~~ 80 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSN-------KDNEVDFNEFVVLVA 80 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 57889999996 443 3 89999999999863221 135778899999876522 246799999998875
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=85.58 E-value=1.7 Score=40.36 Aligned_cols=67 Identities=10% Similarity=0.223 Sum_probs=48.8
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHH---HHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIE---DAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~---~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
....++..+|..|-.+ ...|+.++|..+|........++.+ ++.+++..+... +.+.+++++|..+|
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d-------~dG~Is~~EF~~~~ 189 (191)
T 3k21_A 119 LSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKN-------NDGKIDFHEFSEMM 189 (191)
T ss_dssp CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSS-------SSSSBCHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCC-------CCCeECHHHHHHHH
Confidence 3457889999999654 5889999999999864433345553 477777766421 34689999999987
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=85.54 E-value=0.79 Score=34.24 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=45.4
Q ss_pred HHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 29 KEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 29 ~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+|..+-.+ ...|+.++|..+|+... . ..+.+++..++..+... +.+.+++++|..++..
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~D~~-------~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKR-A-IKNEQLLQLIFKSIDAD-------GNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHCTT-------CSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcc-C-CCcHHHHHHHHHHHCCC-------CCCCCCHHHHHHHHHh
Confidence 4678888644 58999999999998753 2 24567788888877522 3468999999998853
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.50 E-value=0.36 Score=36.75 Aligned_cols=65 Identities=14% Similarity=0.307 Sum_probs=49.6
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+..++..+|..|-.+ ...|+.++|..+|.... . ..+.+++..++..+... +.+.+++++|..++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~~-------~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-Q-PLPQEELDAMIREADVD-------QDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTT-C-SSCHHHHHHHHHHCCSS-------SSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHh
Confidence 456789999988654 57899999999997643 3 36788888888876421 245799999999885
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=85.43 E-value=2.8 Score=36.57 Aligned_cols=64 Identities=13% Similarity=0.307 Sum_probs=48.7
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..++...|..|-.+ ...|+.++|+.+|... ++ ..+.+++.+++..+... +.+.++++.|..+|.
T Consensus 78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d-------~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 78 KEEILKAFKLFDDDETGKISFKNLKRVAKEL-GE-NLTDEELQEMIDEADRD-------GDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCTT-------SSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHc
Confidence 35788889888544 4789999999999754 44 46888899999876522 346799999998874
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A | Back alignment and structure |
|---|
Probab=85.27 E-value=1.3 Score=35.23 Aligned_cols=64 Identities=9% Similarity=0.295 Sum_probs=48.5
Q ss_pred hhHHHHHHHhhC-C-CC-ccCHHHHHHHHHHH--hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE-G-GT-HMTAEQLWQFLVEV--QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~-~-~~-~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..|-. + .. .|+.++|...|+.. -+. ..+.+++..++..+... +.+.+++++|..++.
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~ 78 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGS-KLQDAEIARLMEDLDRN-------KDQEVNFQEYVTFLG 78 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGG-GTTSHHHHHHHHHHHHT-------TTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCC-CCCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHH
Confidence 478889999973 5 46 89999999999863 233 35677889999887532 246799999998875
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=85.23 E-value=1.4 Score=39.22 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=52.6
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
...++..+|..|-.+ ...|+.++|..+|... +. .++.+++..++..+... +.+.+++++|..+|.+.
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d-------~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GG-RFTPEEIKNMWAAFPPD-------VAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-CC-CCCHHHHHHHHHhcCCC-------CCCeEeHHHHHHHHHhc
Confidence 457789999999654 5889999999999864 44 47888899999886421 24679999999999853
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=85.03 E-value=1.5 Score=36.79 Aligned_cols=63 Identities=16% Similarity=0.129 Sum_probs=49.2
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+.++..+|..+-.+ ...|+.++|+.+|+.. ..+.+++.+|+...... +.+.+++++|...|.
T Consensus 9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----~l~~~~l~~i~~~~D~d-------~dG~i~~~EF~~~~~ 72 (99)
T 1qjt_A 9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS----GLPDLILGKIWDLADTD-------GKGVLSKQEFFVALR 72 (99)
T ss_dssp TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS----SSCHHHHHHHHHHHCCS-------SSSSCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc----CCCHHHHHHHHHHHCCC-------CCCcCCHHHHHHHHH
Confidence 457899999999655 5889999999999753 36788888888875421 346799999998874
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=84.96 E-value=1.4 Score=36.10 Aligned_cols=65 Identities=11% Similarity=0.328 Sum_probs=48.2
Q ss_pred hhHHHHHHHhh-CCC-C-ccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGG-T-HMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~-~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|. .++ . .|+.++|..+|+..-+....+.+.+..++..+-.. +.+.+++++|..++.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d-------~dG~I~f~EF~~~~~ 77 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKN-------SDQEIDFKEYSVFLT 77 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTT-------CSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 57888999998 553 5 89999999999864221015667788898886522 246799999999885
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=84.92 E-value=2.2 Score=38.06 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=49.8
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.++..+|..+-.+ ...|+.++|+.+|... + ++.+++..++..+... +.+.+++++|..+|.
T Consensus 93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g---~~~~~~~~~~~~~D~d-------~dg~i~~~ef~~~~~ 155 (174)
T 1q80_A 93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G---LDKTMAPASFDAIDTN-------NDGLLSLEEFVIAGS 155 (174)
T ss_dssp HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-T---CCGGGHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhCCC-------CCceEeHHHHHHHHH
Confidence 36788999999654 5899999999999987 3 5778899999887522 246799999998875
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=84.56 E-value=1.8 Score=46.30 Aligned_cols=67 Identities=12% Similarity=0.350 Sum_probs=51.6
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+..+|..+|+.|-.+ ...|+.++|+.+|... ++ .++.+++.+|+..+... +.+.+++++|.++|.|
T Consensus 372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-Ge-~LSdeEIdeLfke~D~D-------gDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID-------GDGQVNYEEFVQMMTA 439 (440)
T ss_dssp --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHC-
T ss_pred ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHhCC
Confidence 3457899999999544 5889999999999865 44 47889999999887522 2467999999999975
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=84.44 E-value=1.9 Score=37.18 Aligned_cols=66 Identities=17% Similarity=0.325 Sum_probs=51.5
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+.++..+|..|-.+ ...|+.++|+.+|... +. ..+.+++..++.. ... +.+.+++++|..+|.+
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~-d~~-------~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-GE-KMTEEEVEELMKG-QED-------SNGCINYEAFVKHIMS 148 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh-CC-CCCHHHHHHHHhh-CCC-------CCCcEeHHHHHHHHhc
Confidence 3457888999999654 5789999999999875 44 4688889999887 421 2467999999999874
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=84.36 E-value=1.1 Score=38.69 Aligned_cols=64 Identities=9% Similarity=0.254 Sum_probs=44.7
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
....+..+|..|-.+ ...|+.++|..+|... +. .++.+++..++..+. . +.+.+++++|..+|.
T Consensus 77 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d-~-------~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNL-GD-RLKPHEFAEFLGITE-T-------EKGQIRYDNFINTMF 141 (142)
T ss_dssp CHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHC-C-------SSSEECSHHHHTTTC
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CC-CCCHHHHHHHHHHhC-C-------CCCcEeHHHHHHHHc
Confidence 456777788887544 4678888888888753 33 367777888887764 2 245688888887765
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=84.17 E-value=1.7 Score=39.08 Aligned_cols=65 Identities=11% Similarity=0.322 Sum_probs=47.5
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
.++..+|..|-.+ ...|+.++|..+|.... . .++.+++..++..+... +.+.+++++|..+|.+.
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g-~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID-------GDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC----CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHSCC-
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHHHc
Confidence 4677788888544 57799999999988643 3 36788888888887522 24679999999999863
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=84.07 E-value=3.3 Score=38.34 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=50.8
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh---------------CCCCCCHHHHHHHHHHHhhhccccccccCCCc
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ---------------GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSL 87 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q---------------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l 87 (602)
+..++..+|..|-.+ ...|+.++|..+|.... ++...+.+.+..++..+... +.+.+
T Consensus 93 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d-------~dG~I 165 (204)
T 1jba_A 93 LEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDEN-------GDGQL 165 (204)
T ss_dssp CTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCS-------CCSCB
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCC-------CCCeE
Confidence 456899999999654 57899999999998762 12224456788888887522 24679
Q ss_pred CHHHHHHHhcC
Q 007473 88 TVEDFHHYLFS 98 (602)
Q Consensus 88 ~~~gF~~~L~S 98 (602)
++++|..+|.+
T Consensus 166 s~~Ef~~~~~~ 176 (204)
T 1jba_A 166 SLNEFVEGARR 176 (204)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHHc
Confidence 99999999975
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=83.87 E-value=0.92 Score=35.54 Aligned_cols=67 Identities=7% Similarity=0.168 Sum_probs=51.0
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
....++. +|..|-.+ ...|+.++|...|...... ..+.+++..++..+... +.+.+++++|..++..
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~~~~~~D~~-------~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEE-PLTDAEVEEAMKEADED-------GNGVIDIPEFMDLIKK 73 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTC-CCCHHHHHHHHHHHCSS-------GGGSEEHHHHHHHHHC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHh
Confidence 3457899 99999655 4789999999999864313 36788899999887522 2367999999999975
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=83.59 E-value=1.4 Score=38.78 Aligned_cols=66 Identities=9% Similarity=0.196 Sum_probs=52.5
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
...++..+|..|-.+ ...|+.++|+.+|... +. .++.+++..++..+.. - .+.+++++|..+|.+.
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~-------~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GD-NFNKDEMRMTFKEAPV-------E-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHCCE-------E-TTEECHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCC-------C-CCEEeHHHHHHHHhcC
Confidence 457889999999654 5789999999999875 44 4788899999987642 1 3679999999999864
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=83.45 E-value=0.91 Score=39.53 Aligned_cols=67 Identities=10% Similarity=0.253 Sum_probs=52.1
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+.++..+|..|-.+ ...|+.++|+.+|... +. .++.+++..++..+... +.+.+++++|..+|.+
T Consensus 80 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~d-------~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 80 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL-GE-KLTDAEVDELLKGVEVD-------SNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-TT-CCCHHHHHHHHTTCCCC-------TTSEEEHHHHHHHHHC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHhc
Confidence 4567899999999654 5789999999999865 44 46888888888765421 2467999999999874
|
| >1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A | Back alignment and structure |
|---|
Probab=83.29 E-value=0.66 Score=38.98 Aligned_cols=65 Identities=12% Similarity=0.215 Sum_probs=46.0
Q ss_pred hhHHHHHHHhhCCCCccCHHHHHHHHHHHh----CC-CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEGGTHMTAEQLWQFLVEVQ----GH-GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q----~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|-.+...|+.++|+.+|+..- +. ...+.+++.+++..+-.. +.+.+++++|...|.
T Consensus 10 ~~l~~~F~~fD~~~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d-------~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 10 IGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKN-------EDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTT-------CSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 578899999965557999999999998631 11 013445677788775421 246799999998875
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=83.13 E-value=2.2 Score=39.80 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=51.4
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|..+|....+. ..+.+++..+++..-.... .-+.+.+++++|..+|.+
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~s~~~~~~l~~~~~~~~D---~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEAD---QDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCT-TCCHHHHHHHHHHHHHHHC---SSSSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHhC---CCCCCcCcHHHHHHHHhc
Confidence 456788999999655 5889999999999987666 3688888888433221110 113467999999999875
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=83.05 E-value=1.4 Score=36.33 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=47.3
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.++..+|..|-.+ ...|+.++|+.+|+.. ..+.+++.+|+..+... +.+.+++++|...|.
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~----g~~~~~~~~i~~~~D~d-------~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKT----GLPSTLLAHIWSLCDTK-------DCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTT----TCCHHHHHHHHHHHCTT-------CSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc----CCCHHHHHHHHHHHCCC-------CCCcCCHHHHHHHHH
Confidence 46788899999644 5889999999999753 35778888888876421 246799999988764
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=82.98 E-value=0.92 Score=36.02 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=48.7
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..|-.+ ...|+.++|...|+... . ..+.+++..++..+... +.+.+++++|..+++
T Consensus 23 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~l~~~~d~~-------~~g~i~~~eF~~~~~ 86 (87)
T 1s6j_A 23 GGLKELFKMIDTDNSGTITFDELKDGLKRVG-S-ELMESEIKDLMDAADID-------KSGTIDYGEFIAATV 86 (87)
T ss_dssp TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTT-S-SCCHHHHHHHHHHHCTT-------CSSEECHHHHTTCCC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHh
Confidence 4688899999654 58899999999998653 3 36788899999887522 245799999988765
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=82.93 E-value=3.6 Score=35.46 Aligned_cols=64 Identities=9% Similarity=0.146 Sum_probs=49.6
Q ss_pred chhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+|..+|..+-. +...|+.++|..+|..... ..+.+++..++..+... +.+.+++++|..++.
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~l~~~~d~~-------~~g~i~~~eF~~~~~ 74 (153)
T 3ox6_A 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGY--MPTEMELIELSQQINMN-------LGGHVDFDDFVELMG 74 (153)
T ss_dssp HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTC--CCCHHHHHHHHHHHHTT-------STTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhCCC-------CCccCcHHHHHHHHH
Confidence 3567888998854 4689999999999987543 36788889999888632 246799999999885
|
| >3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A* | Back alignment and structure |
|---|
Probab=82.82 E-value=1.5 Score=44.64 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=44.0
Q ss_pred cccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc-------ccchHHHHHHHHhhc
Q 007473 129 YLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT-------TPVELIKCLRAIKEN 192 (602)
Q Consensus 129 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt-------s~i~f~dvi~aI~~~ 192 (602)
|.+|+- +-++++...|+..|+.-||+|+.=-.+ +.|+++|-++.+ ....|.+-++.|++.
T Consensus 30 ~~i~H~---vNTl~~~~~a~~~GAn~IE~DV~~~~d-g~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ 96 (302)
T 3rlg_A 30 WIMGAM---VNAIGQIDEFVNLGANSIETDVSFDDN-ANPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSA 96 (302)
T ss_dssp EEEESC---CCSHHHHHHHHHTTCSEEEEEECBCTT-SCBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHH
T ss_pred EEEeeh---hhhHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEECCCCcchhccCCCCccHHHHHHHHHHh
Confidence 344443 567999999999999999999975445 346665544443 257889999999884
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=82.75 E-value=2.2 Score=33.30 Aligned_cols=66 Identities=18% Similarity=0.273 Sum_probs=46.3
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHH----HHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQ----IVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~----ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
...++..+|..|-.+ ...|+.++|..+|.........+.+++.. ++..+.. -+.+.+++++|...+
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~~dg~I~~~eF~~~~ 75 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK-------NSDGKISKEEFLNAN 75 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCS-------SSCSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCC-------CCCCCCcHHHHHHhh
Confidence 456899999999655 58899999999999765212356666777 4443321 134679999998664
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=82.64 E-value=3 Score=36.65 Aligned_cols=61 Identities=8% Similarity=-0.049 Sum_probs=48.7
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
++..+|..+-.+ ...|+.++|..+|.... .+.+++..++..+... +.+.+++++|..+|.+
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~----~~~~~~~~~~~~~D~d-------~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFG----VPEDLARQAAAALDTD-------GDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTT----CCHHHHHHHHHHHCTT-------CSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----CCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHH
Confidence 488899888654 57899999999998753 6788899999887532 3467999999998863
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=82.17 E-value=1.8 Score=35.41 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=46.4
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.++..+|..|-.+ ...|+.++|+.+|+.. + .+.+++.+|+...... +.+.+++++|...+.
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g---~~~~~~~~i~~~~D~d-------~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K---LPILELSHIWELSDFD-------KDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S---SCHHHHHHHHHHHCTT-------CSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHHCCC-------CCCCCCHHHHHHHHH
Confidence 35677788888654 5789999999999875 2 5677888888875421 246799999988764
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=81.71 E-value=2.3 Score=38.46 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=54.1
Q ss_pred CCCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 22 AGPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
.....+|...|+.|-.+ ..+|+.++|+..|... |+ .++.+++.+|+..+.-. .-+.+.++++.|++.|++.
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-g~-~ls~~e~~~l~~~~D~~-----~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKML-GE-RITEDQCNDIFTFCDIR-----EDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHS-SS-CCCHHHHHHHHHHTTCC-----CCSSCCEEHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCcC-----CCCCCeEeHHHHHHHHHCC
Confidence 34456799999999654 5899999999999763 55 47899999999875411 0124679999999999974
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=81.57 E-value=3.3 Score=36.11 Aligned_cols=66 Identities=21% Similarity=0.173 Sum_probs=51.2
Q ss_pred chhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|+.|-. +...|+.++|+..|.....+ .++.+++..++..+... +.+.+++++|..+|..
T Consensus 39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-~~~~~e~~~~~~~~D~d-------~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIE-GMSKEDAQGMVREGDLD-------GDGALNQTEFCVLMVR 105 (135)
T ss_dssp HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCC-CCCHHHHHHHHHHHCSS-------CSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHH
Confidence 4678899999954 46899999999999864322 46888999999887522 3468999999999863
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=81.52 E-value=3.5 Score=36.76 Aligned_cols=65 Identities=9% Similarity=0.205 Sum_probs=50.4
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...|+.++|...|.... . ..+.+++..++..+... +.+.+++++|..++..
T Consensus 49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g-~-~~~~~e~~~l~~~~D~d-------~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLG-V-PKTHLEMKKMISEVTGG-------VSDTISYRDFVNMMLG 114 (150)
T ss_dssp HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHHTT-------SCSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcC-C-CCCHHHHHHHHHHHCCC-------CCCcEeHHHHHHHHHH
Confidence 45677888888654 47899999999998753 3 36788899999887632 2467999999999874
|
| >2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.51 E-value=2.8 Score=39.62 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=53.4
Q ss_pred CCCchhHHHHHHHhhCC------CCccCHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHH
Q 007473 22 AGPPADVKEMFKKYAEG------GTHMTAEQLWQFLVEVQGH--GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFH 93 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~------~~~l~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~ 93 (602)
.....+|+.+|..|+.- ...|+-.+|.+++++..=- ..++..++.-|+.++... ..+.|++++|.
T Consensus 4 ~~~~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k-------~~rkI~feqF~ 76 (184)
T 2jrf_A 4 STDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGK-------SARVINYEEFK 76 (184)
T ss_dssp SSSCSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCS-------CCSEEEHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccC-------cceeecHHHHH
Confidence 34567999999999962 2579999999999988643 346788999999997621 13459999999
Q ss_pred HHhc
Q 007473 94 HYLF 97 (602)
Q Consensus 94 ~~L~ 97 (602)
..|-
T Consensus 77 ~aL~ 80 (184)
T 2jrf_A 77 KALE 80 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=81.41 E-value=0.93 Score=39.19 Aligned_cols=66 Identities=14% Similarity=0.321 Sum_probs=52.0
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|+.+|... +. .++.+++..++..+... +.+.+++++|..+|.+
T Consensus 74 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~-~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 74 PEDVIRNAFACFDEEASGFIHEDHLRELLTTM-GD-RFTDEEVDEMYREAPID-------KKGNFNYVEFTRILKH 140 (143)
T ss_dssp CHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTS-SS-CCCHHHHHHHHHHTTCC-------SSSCCCSTHHHHHHHS
T ss_pred cHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-CC-CCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHhc
Confidence 456788899998654 5889999999999854 33 47888999999887521 3467999999999975
|
| >1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11 | Back alignment and structure |
|---|
Probab=81.35 E-value=2.8 Score=38.40 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=50.5
Q ss_pred CCchhHHHHHHHhhCC----C--CccCHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHH
Q 007473 23 GPPADVKEMFKKYAEG----G--THMTAEQLWQFLVEVQGH--GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHH 94 (602)
Q Consensus 23 ~~r~el~~if~~~~~~----~--~~l~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~ 94 (602)
....+|+.+|..|+.- . ..|+-.+|.+++++..=- ..++..++.-|+.++... ..+.|++++|..
T Consensus 12 ~d~~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k-------~~rkI~f~qF~~ 84 (151)
T 1wlm_A 12 TDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAK-------SARVINYEEFKK 84 (151)
T ss_dssp CSCCSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCS-------SCSEEEHHHHHH
T ss_pred ccHHHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccC-------ccceecHHHHHH
Confidence 3446899999999862 2 579999999999988744 346788999999997621 123477777777
Q ss_pred Hhc
Q 007473 95 YLF 97 (602)
Q Consensus 95 ~L~ 97 (602)
.|-
T Consensus 85 aL~ 87 (151)
T 1wlm_A 85 ALE 87 (151)
T ss_dssp HHH
T ss_pred HHH
Confidence 663
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A | Back alignment and structure |
|---|
Probab=81.25 E-value=3.3 Score=33.66 Aligned_cols=64 Identities=9% Similarity=0.209 Sum_probs=47.2
Q ss_pred hhHHHHHHHhh-CC-CC-ccCHHHHHHHHHH-Hh---CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EG-GT-HMTAEQLWQFLVE-VQ---GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~-~~-~l~~~~~~~Fl~~-~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|. .+ .. .|+.++|...|+. .- +. ..+.+.+..++..+... +.+.+++++|..++.
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~-~~~~~~~~~l~~~~D~~-------~dg~I~~~EF~~~~~ 83 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQN-QKDPGVLDRMMKKLDLD-------SDGQLDFQEFLNLIG 83 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH-CCCTHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccc-cCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 47889999996 54 46 8999999999973 10 12 25677889998876522 246799999998875
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.19 E-value=2.4 Score=35.29 Aligned_cols=65 Identities=11% Similarity=0.213 Sum_probs=50.2
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-.+ ...++.++|...|.... . ..+.+++..++..+... +.+.+++++|..++..
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g-~-~~~~~~~~~l~~~~D~d-------~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLG-V-PKTHLELKKLIGEVSSG-------SGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCSS-------SSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHHHH
Confidence 35678888888644 58899999999998763 3 36888899999887522 2457999999999864
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=80.97 E-value=1.6 Score=35.60 Aligned_cols=64 Identities=13% Similarity=0.225 Sum_probs=45.4
Q ss_pred hhHHHHHHHhhC-CC-C-ccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE-GG-T-HMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~-~~-~-~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|..|-. ++ . .|+.++|+.+|...-+.. .+.+++..++..+-.. +.+.+++++|..++.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~-~~~~~~~~l~~~~D~d-------~dG~I~~~EF~~~~~ 76 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQY-IRKKGADVWFKELDIN-------TDGAVNFQEFLILVI 76 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHH-HHTTCHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCccc-CCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHH
Confidence 478899999976 54 6 899999999995333321 2334567777776421 246799999998875
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=80.75 E-value=4.4 Score=36.80 Aligned_cols=69 Identities=10% Similarity=0.125 Sum_probs=51.7
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh----------CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHH
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ----------GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVED 91 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q----------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~g 91 (602)
.+..++..+|..|-.+ ...|+.++|..++.... .....+.+.+..++..+-.. +.+.+++++
T Consensus 96 ~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d-------~dG~I~~~E 168 (190)
T 2l2e_A 96 ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKN-------KDGQLTLEE 168 (190)
T ss_dssp CSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCC-------SSCCBCHHH
T ss_pred CHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCC-------CCCcCcHHH
Confidence 3457899999999644 58899999999998731 11235677888898887522 246799999
Q ss_pred HHHHhcC
Q 007473 92 FHHYLFS 98 (602)
Q Consensus 92 F~~~L~S 98 (602)
|..++.+
T Consensus 169 f~~~~~~ 175 (190)
T 2l2e_A 169 FCEGSKR 175 (190)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999975
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=80.28 E-value=2.5 Score=37.71 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=49.9
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++..+|..+-.+ ...|+.++|..+|.... .+.+++..++..+... +.+.+++++|..+|..
T Consensus 102 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g----~~~~~~~~~~~~~D~d-------~dg~i~~~ef~~~~~~ 164 (176)
T 1nya_A 102 PVVKGIVGMCDKNADGQINADEFAAWLTALG----MSKAEAAEAFNQVDTN-------GNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT----CCHHHHHHHHHHHCTT-------CSSEEEHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC----CCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHH
Confidence 4588899999655 57899999999998753 6788899999987522 2467999999999974
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.26 E-value=5.1 Score=37.46 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=49.9
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCC---CCCCH-HHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGH---GGVSI-EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~---~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+..++..+|..|-.+ ...|+.++|..+|...... ...+. +.+..++..+... +.+.+++++|..+|.+
T Consensus 91 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d-------~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 91 MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDIN-------NDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHh
Confidence 346788999999654 5889999999999876531 12344 4478888877522 2467999999999985
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=80.25 E-value=3.1 Score=44.83 Aligned_cols=66 Identities=11% Similarity=0.316 Sum_probs=52.0
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|+.+|.... . .++.+++..|+.++... ..+.+++++|..+|.+
T Consensus 383 ~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG-~-~ls~eei~~Lf~~~D~D-------~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID-------GDGQVNYEEFVQMMTA 449 (450)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT-C-CCCHHHHHHHHHHHCTT-------SSSSEEHHHHHHHHC-
T ss_pred hhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHhc
Confidence 346788899999654 58899999999999764 3 47888999999988632 2467999999999974
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=80.21 E-value=4.1 Score=37.50 Aligned_cols=64 Identities=17% Similarity=0.270 Sum_probs=44.7
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++..+|..|-.+ ...|+.++|..+|... +. ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSS-GY-QVSEQTFQALMRKFDRQ-------RRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTT-SC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHHH
Confidence 4566677777544 4678888888888753 33 36777888888876522 2467999999998863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 602 | ||||
| d2zkmx4 | 349 | c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human | 1e-115 | |
| d1qasa3 | 327 | c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P | 1e-113 | |
| d1qasa2 | 131 | b.7.1.1 (A:626-756) PI-specific phospholipase C is | 7e-21 | |
| d1qasa1 | 94 | a.39.1.7 (A:205-298) Phosphoinositide-specific pho | 4e-20 | |
| d2zkmx2 | 122 | b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human | 9e-19 | |
| d2plca_ | 274 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 5e-14 | |
| d2ptda_ | 296 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 9e-12 | |
| d1a25a_ | 132 | b.7.1.2 (A:) C2 domain from protein kinase c (beta | 9e-09 | |
| d1w15a_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi | 4e-08 | |
| d2cm5a1 | 137 | b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( | 3e-07 | |
| d1uowa_ | 157 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 3e-06 | |
| d1dqva2 | 145 | b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus | 2e-04 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 3e-04 | |
| d1ugka_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens | 4e-04 | |
| d2ep6a1 | 126 | b.7.1.1 (A:92-217) Multiple C2 and transmembrane d | 5e-04 | |
| d1rsya_ | 143 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 7e-04 | |
| d2bwqa1 | 125 | b.7.1.2 (A:729-853) Regulating synaptic membrane e | 7e-04 | |
| d1rh8a_ | 142 | b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax | 0.002 |
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 344 bits (883), Expect = e-115
Identities = 105/348 (30%), Positives = 163/348 (46%), Gaps = 11/348 (3%)
Query: 112 DMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDV-LV 170
DMT PL+HYFI + HN+YL QFS S + L G R +ELD W D+ ++
Sbjct: 2 DMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPII 61
Query: 171 LHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAML 229
HG T+TT + + + AI E+AF SPYP+IL+FE+H+ +P QAK+A+ FG ML
Sbjct: 62 THGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDML 121
Query: 230 YSPESECL-----KEFPSPEELKYRIIISTKPPKERREKK-GINNRKDISAKGKISTEDV 283
+ E PSPE+L+ +I+I K + + + S V
Sbjct: 122 LTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAV 181
Query: 284 LGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIA-IHNGKL 342
E + +E + ++ ++ +E D T AY+ + + ++ +
Sbjct: 182 WAGEEGTELEEEEVEEEEEEESGNLDE-EEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 240
Query: 343 KGCLKEELNLQLEKVRRI-SLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNY 401
+ E + Q + I S +E K V + ++ + RIYPK TR++SSNY
Sbjct: 241 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 300
Query: 402 KPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLK 449
P + W G QMVALN Q + +F N GY+ K F+ +
Sbjct: 301 MPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348
|
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 338 bits (867), Expect = e-113
Identities = 98/350 (28%), Positives = 145/350 (41%), Gaps = 29/350 (8%)
Query: 116 PLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175
PLSHY + + HN+YL+ +Q + S +AL +G R +ELD W ++ + + HG T
Sbjct: 3 PLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYT 61
Query: 176 LTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYS-PES 234
T+ + LRAI++ AF ASPYPVIL+ E+H + Q +A+ + G +L P
Sbjct: 62 FTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLD 121
Query: 235 ECLKEFPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTAN 294
PSPE+LK +I++ K G N + +++V E D
Sbjct: 122 GVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATD-----VSDEVEAAEMEDEAVR 176
Query: 295 QADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQL 354
+ D + +I G
Sbjct: 177 SQVQHKPKEDKLKLVP-------------------ELSDMIIYCKSVHFGGFSSPGTSGQ 217
Query: 355 EKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMV 414
S SE + + G VR + RIYP R +SSNY P+ W G Q+V
Sbjct: 218 AFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIV 277
Query: 415 ALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLP 464
ALN Q G + + G F+ N GCGYV KP FL + F+ +
Sbjct: 278 ALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRALTQ 324
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 86.7 bits (214), Expect = 7e-21
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTK-KKVDNWTPVWDDEFTFPLTIPEMAL 540
+++ S V I GV D + T + + P WD EF F +T+P++AL
Sbjct: 15 QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLAL 74
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595
+R V Y K++F GQ+ +P L+ G V L + G++ SA L ++
Sbjct: 75 VRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 129
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.0 bits (205), Expect = 4e-20
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRS 86
++ F++ A ++ E+L FL Q A ++++ +R
Sbjct: 9 EIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE---PSETAKAQRQ 65
Query: 87 LTVEDFHHYLFSTDLNP--PLGNQVYQDM 113
+T + F YL S D N +VYQDM
Sbjct: 66 MTKDGFLMYLLSADGNAFSLAHRRVYQDM 94
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.4 bits (198), Expect = 9e-19
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 19/132 (14%)
Query: 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV---DNWTPV 524
TL + G Q + + Y V + G+P D K + K ++ PV
Sbjct: 2 TLSITVISG--------QFLSE--RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPV 51
Query: 525 WDDE--FTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGE 582
W +E + +PE+A LRV V + ++F G +P+ L G H + L
Sbjct: 52 WKEEPFVFEKILMPELASLRVAVMEE----GNKFLGHRIIPINALNSGYHHLCLHSESNM 107
Query: 583 ELGSARLLMRFE 594
L L + E
Sbjct: 108 PLTMPALFIFLE 119
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Score = 70.6 bits (172), Expect = 5e-14
Identities = 19/146 (13%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 116 PLSHYFIYTGHNSYLIGNQFSSD-------CSDVPITKALKRGVRVIELDLWPNSAKDDV 168
L+ I H++ + + + + L+ G+R I++ D++
Sbjct: 15 NLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK-----DNL 69
Query: 169 LVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTF-EDHLNPHLQAKVAQMITQTFGA 227
+ HG L L I + +I+ ++ + Q + +
Sbjct: 70 NIYHGPIF-LNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKD 128
Query: 228 MLYS-PESECLKEFPSPEELKYRIII 252
Y+ P ++ + P+ ++++ +I++
Sbjct: 129 YFYTTPRTDTSNKIPTLKDVRGKILL 154
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Score = 63.7 bits (154), Expect = 9e-12
Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 10/147 (6%)
Query: 112 DMTAPLSHYFIYTGHNS--YLIGNQF---SSDCSDVPITKALKRGVRVIELDLWPNSAKD 166
+ PL+ I H+S + + N + + G R+ ++ D
Sbjct: 18 PDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLT--DD 75
Query: 167 DVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFG 226
+ +VLH L V L + + K+ +I++ + + TF
Sbjct: 76 NTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYED--MKGAEDSFSSTFE 133
Query: 227 AMLY-SPESECLKEFPSPEELKYRIII 252
+ P + + + +I++
Sbjct: 134 KKYFVDPIFLKTEGNIKLGDARGKIVL 160
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.0 bits (124), Expect = 9e-09
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-AL 540
+ MD S P Y ++ + P + + TK + P W++ F F L +
Sbjct: 26 NLVPMDPNGLSDP--YVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRR 83
Query: 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI--HAVPLFDRKGEE 583
L VE+ + + +++F G + +L+ L ++ E
Sbjct: 84 LSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGE 128
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.5 bits (120), Expect = 4e-08
Identities = 19/124 (15%), Positives = 33/124 (26%), Gaps = 9/124 (7%)
Query: 463 LPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWT 522
TL V + D Y +V + K T K
Sbjct: 11 QSTTNTLTVVVLKAR----HLPKSD--VSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPN 64
Query: 523 PVWDDEFTFPLTIPEMAL--LRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDR 579
V+++ F F + + + V ++E G+ L G H + D
Sbjct: 65 AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDF 124
Query: 580 KGEE 583
+
Sbjct: 125 PRRQ 128
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.9 bits (113), Expect = 3e-07
Identities = 13/105 (12%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALL 541
MD + ++ + K T+ K P +++EF + + ++A
Sbjct: 26 HLAAMD--ANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKK 83
Query: 542 RVEVRKYS--MPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEE 583
+++ + + + +++ G L + + H K ++
Sbjct: 84 SLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 128
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 45.6 bits (107), Expect = 3e-06
Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 8/111 (7%)
Query: 463 LPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWT 522
+P L V K+MD S P Y ++ + K K T K +
Sbjct: 21 VPTAGKLTVVILEAKNL----KKMDVGGLSDP--YVKIHLMQNGKRLKKKKTTIKKNTLN 74
Query: 523 PVWDDEFTFPLTIPE--MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571
P +++ F+F + + + V V Y K++ G+ + +
Sbjct: 75 PYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAEL 125
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.8 bits (92), Expect = 2e-04
Identities = 16/109 (14%), Positives = 28/109 (25%), Gaps = 8/109 (7%)
Query: 463 LPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWT 522
LP L V Y + + K + T K +
Sbjct: 16 LPTAGLLTVTIIKASNL------KAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 69
Query: 523 PVWDDEFTFPLTIPEM--ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRP 569
P +++ F + + L + V Y +E G + P
Sbjct: 70 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 118
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (92), Expect = 3e-04
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 24 PPADVKEMFKKY-AEGGTHMTAEQLWQFLVEVQG--------HGGVSIEDAEQIVDQVLQ 74
P ++ E+F Y A+ +MT E L +F+ + Q + + ++D+
Sbjct: 76 PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYE- 134
Query: 75 RWHHIARFTRRSLTVEDFHHYLFSTDLNPPL 105
R L+ E +L + N L
Sbjct: 135 --PSGINAQRGQLSPEGMVWFLCGPE-NSVL 162
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (89), Expect = 4e-04
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 6/92 (6%)
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--- 538
MD + + + + +P K T+ P +D+ FTF
Sbjct: 33 GLPAMDEQSMTSDPYIK---MTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQE 89
Query: 539 ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG 570
L + + +D+ G+ +P+ +
Sbjct: 90 LALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 508 DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQL 567
T N P W+ FTFP+ +L V V + +F G+ +P+ +
Sbjct: 36 GNDRLQTHTVYKNLNPEWNKVFTFPI-KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSI 94
Query: 568 RPGI-HAVPLFDRKGEELGSARLLMRFEF 595
R G + L ++ E+ + + +
Sbjct: 95 RDGQPNCYVLKNKDLEQAFKGVIYLEMDL 123
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.2 bits (88), Expect = 7e-04
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 482 DFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA-- 539
+ +D S P + P KK TK PV++++FTF + E+
Sbjct: 45 ELPALDMGGTSDPYVKVFLL----PDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGK 100
Query: 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG 570
L + V + K + G+ +P+ + G
Sbjct: 101 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (87), Expect = 7e-04
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 492 SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVEVRKY 548
P Y ++ +DK + TK P W+ F + +L + +
Sbjct: 33 RPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 92
Query: 549 SM--PEKDEFAGQTCLPV 564
+ E+ EF G+ + +
Sbjct: 93 ARVREEESEFLGEILIEL 110
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.2 bits (85), Expect = 0.002
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Query: 499 RVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLT---IPEMALLRVEVRKYSMPEKDE 555
+V + + + + TK + P W+ + L V V Y ++
Sbjct: 53 QVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSND 112
Query: 556 FAGQTCLPVFQLRPG 570
F G+ + +
Sbjct: 113 FLGEVLIDLSSTSHL 127
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 602 | |||
| d1qasa3 | 327 | Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n | 100.0 | |
| d2zkmx4 | 349 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 100.0 | |
| d2zkmx2 | 122 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.93 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 99.93 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 99.7 | |
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 99.67 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 99.61 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 99.59 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 99.55 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 99.51 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 99.49 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 99.49 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.49 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.46 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.45 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.44 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 99.43 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 99.43 | |
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 99.42 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 99.38 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 99.33 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.31 | |
| d2ptda_ | 296 | Phosphatidylinositol-specific phospholipase C {Bac | 99.2 | |
| d1bdya_ | 123 | Domain from protein kinase C delta {Rat (Rattus no | 99.17 | |
| d2plca_ | 274 | Phosphatidylinositol-specific phospholipase C {Lis | 98.85 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.71 | |
| d1vd6a1 | 217 | Putative glycerophosphodiester phosphodiesterase T | 96.4 | |
| d1e7ua2 | 174 | Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) | 96.03 | |
| d1zcca1 | 240 | Glycerophosphodiester phosphodiesterase UgpQ {Agro | 96.0 | |
| d1o1za_ | 226 | Hypothetical protein TM1621 {Thermotoga maritima [ | 95.03 | |
| d1ydya1 | 328 | Glycerophosphodiester phosphodiesterase GlpQ {Esch | 94.92 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 94.79 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 94.05 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 93.82 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 93.79 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 93.76 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 93.55 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 93.5 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 93.11 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 92.67 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 92.54 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 92.28 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 91.65 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 91.61 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 91.57 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 91.52 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 91.47 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 91.22 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 90.85 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 90.77 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 90.54 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 90.46 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 90.3 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 90.1 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 89.96 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 89.85 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 89.7 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 89.67 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 89.52 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 89.28 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 89.18 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 89.17 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 88.55 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 88.47 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 88.21 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 87.46 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 86.6 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 85.44 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 85.43 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 84.95 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 84.74 | |
| d1eg3a2 | 97 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 84.57 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 84.19 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 82.73 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 82.69 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 81.04 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 80.84 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 80.56 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 80.25 |
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.9e-102 Score=814.79 Aligned_cols=322 Identities=30% Similarity=0.466 Sum_probs=260.2
Q ss_pred CCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcc
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENA 193 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~A 193 (602)
|||||||||+|||||||+|+||.|.||++||++||++||||||||||||++ ++|||+||||+|++|+|+|||+||++||
T Consensus 1 ~~PLs~YfI~SShNtyl~g~Ql~~~ss~~~~~~~l~~G~R~ielD~w~g~d-~ePvV~HG~t~ts~I~F~dvl~~Ik~~A 79 (327)
T d1qasa3 1 DQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAIRDYA 79 (327)
T ss_dssp CSCGGGEEEEEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEESCTTSCCCCEEHHHHHHHHHHHT
T ss_pred CCCcccceeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCccccceeHHHHHHHHHHhc
Confidence 699999999999999999999999999999999999999999999999977 5799999999999999999999999999
Q ss_pred cccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCccccc
Q 007473 194 FSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINNRKDI 272 (602)
Q Consensus 194 F~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~ 272 (602)
|++|+|||||||||||+.+||.+||++|+++|||+||.++.+ ....+|||++||||||||+|+.....+......
T Consensus 80 F~~S~yPlILsLe~H~~~~qq~~ma~~l~~~fGd~L~~~~~~~~~~~~psp~~Lk~KIlik~K~~~~~~~~~~~~~---- 155 (327)
T d1qasa3 80 FKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENG---- 155 (327)
T ss_dssp TTSCSSCEEEEEEECCCHHHHHHHHHHHHHHTGGGBCCSCCTTCCSSCCCTGGGTTCEEEEECCCCC-------------
T ss_pred CCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhccCCCcccccccCCCHHHHhhhhhhcccccccccccccccC----
Confidence 999999999999999999999999999999999999997744 467899999999999999998754333211000
Q ss_pred cccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhHHhhh
Q 007473 273 SAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNL 352 (602)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~ 352 (602)
..+.+..+ .....+.+ ... ..........+....+.+++++|+.|..++.++++......
T Consensus 156 ----------~~~~~~~~---~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~ 215 (327)
T d1qasa3 156 ----------SEATDVSD---EVEAAEME-DEA------VRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTS 215 (327)
T ss_dssp -----------------------------------------------------CCCHHHHTTCSSEEECCCCCCCTTSSC
T ss_pred ----------ccCCCccc---cccccccc-cch------hhhhhhcccchhhhHhhHHHHhHHHHhcCccCCCccchhhc
Confidence 00000000 00000000 000 00001111122344567889999999888777777665444
Q ss_pred cccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeeecccc
Q 007473 353 QLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMF 432 (602)
Q Consensus 353 ~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F 432 (602)
....++++||+|.++.+++++++.+|++||+++|+||||+|+|+|||||||+.+|++|||||||||||.|.+||+|.|||
T Consensus 216 ~~~~~~~~S~sE~~~~~l~~~~~~~l~~~nk~~l~rvyP~g~ridSsNy~P~~~w~~G~Q~valN~Qt~D~~m~ln~~~F 295 (327)
T d1qasa3 216 GQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCF 295 (327)
T ss_dssp SCCTTEEEEEEHHHHHHHHHHHTHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHT
T ss_pred CCcceeeeecCHHHHHHHHHHhhHHHHHHHHhheEEEecCCCCCCCCCCChHHHHhcCCcEEEEeccCCChhHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeeecCCccCCCCCCCCcCCCCCCC
Q 007473 433 RANAGCGYVKKPNFLLKEGPDDQVFDPKEKL 463 (602)
Q Consensus 433 ~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~ 463 (602)
+.||+|||||||++||++. ..|||....
T Consensus 296 ~~NG~~GyVLKP~~Lr~~~---~~f~p~~~~ 323 (327)
T d1qasa3 296 QDNGGCGYVLKPAFLRDPN---TTFNSRALT 323 (327)
T ss_dssp TSGGGCSEEECCGGGSCTT---CCCCTTSCC
T ss_pred HhcCCcceEECCHHHcCCC---CCcCCCCCC
Confidence 9999999999999999863 479987543
|
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-100 Score=804.95 Aligned_cols=335 Identities=30% Similarity=0.466 Sum_probs=253.3
Q ss_pred cCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHHH
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+||++||+||||+|||||||+|+|+.|.||++||++||++||||||||||||. .+++|||+||+|+|++|+|+|||++|
T Consensus 1 ~DM~~PL~~y~I~SShNtyl~g~q~~~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~t~~i~f~~v~~~I 80 (349)
T d2zkmx4 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAI 80 (349)
T ss_dssp SCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCCCEEHHHHHHHH
T ss_pred CCCCCchhhheeeccccccccCCcCCCcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCeecCceEHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999994 34689999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhccccEEEecCCCCccccc
Q 007473 190 KENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
++|||.+|+||||||||+|| +++||.+||++|+++||++|+.++.+ ....+|||++||||||||+|+.......
T Consensus 81 ~~~aF~~s~~PliL~le~h~~~~~~q~~~a~~l~~~~g~~L~~~~~~~~~~~~~~~~pSP~~Lk~KIlik~K~~~~~~~~ 160 (349)
T d2zkmx4 81 AESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPT 160 (349)
T ss_dssp HHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC------
T ss_pred HHhcccCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHhhhccCcccccccCcCCCCCCHHHhcCcEEEEecCCcccccc
Confidence 99999999999999999999 79999999999999999999997643 2468999999999999999986543322
Q ss_pred cccCcccccc-ccCCCCccccc-CCCCCCCCCCcCCCCCCccccCcCCCCCCcc-----hhhhccccccccccccccceE
Q 007473 264 KGINNRKDIS-AKGKISTEDVL-GKEPPDLTANQADDERSDYDTSEHNQCDEDN-----TEACDRVTRASGTLAYKRLIA 336 (602)
Q Consensus 264 ~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~ 336 (602)
.......... .....+.+..+ +.+...+......++. ... ....+... ..+........+.+++++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~ 236 (349)
T d2zkmx4 161 SSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEVEEEE--EEE--SGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVN 236 (349)
T ss_dssp ------------------------------------------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCS
T ss_pred ccccccccccccCCCCcccccccCccccccccccccccc--ccc--ccccchhhhhhhccccccccccccchHHHHhhHh
Confidence 2111000000 00000000000 0000000000000000 000 00000000 001111122345678899988
Q ss_pred EecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeec
Q 007473 337 IHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVAL 416 (602)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVAL 416 (602)
|.....+.++...... ...+.++||+|.++.++++.++.+|++||++||+||||+|+|+|||||||+.||++|||||||
T Consensus 237 y~~~~~~~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~li~~Nk~~L~RVYP~g~RvdSSNynP~~~W~~GcQ~VAL 315 (349)
T d2zkmx4 237 YIQPTKFVSFEFSAQK-NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVAL 315 (349)
T ss_dssp SCEECCCCCHHHHHHH-TCTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECB
T ss_pred hhcCCccccchhhccc-CcceEEEecCHHHHHHHHHHhHHHHHHHhhccEEEECcCCCcCCCCCCCcHHHHhcCccEeEe
Confidence 8777666666665544 335678999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcceeeecccccccccceeeecCCccCCC
Q 007473 417 NMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKE 450 (602)
Q Consensus 417 N~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~ 450 (602)
||||.|++||+|+|||++||+|||||||++||++
T Consensus 316 N~Qt~D~~m~ln~g~F~~NG~cGYVLKP~~LR~p 349 (349)
T d2zkmx4 316 NFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRP 349 (349)
T ss_dssp CTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTCT
T ss_pred cccCCCHHHHHHHHHHHhcCCcCeEECCHHHCCC
Confidence 9999999999999999999999999999999974
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.2e-26 Score=205.83 Aligned_cols=116 Identities=29% Similarity=0.495 Sum_probs=99.3
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCccc-ccccC-C-CCCCCCeeccE-EEE-EeecCCccEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKM-KSTKK-K-VDNWTPVWDDE-FTF-PLTIPEMALLR 542 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k-~kTkv-i-~nn~nPvWNEt-f~F-~v~~pela~Lr 542 (602)
+|+|+|||||+|+.. ..||||+|++.|.+.|..+ ++|++ + .|++||+|||+ |.| .+..+++++|+
T Consensus 2 tl~V~Visaq~L~~~----------~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~ 71 (122)
T d2zkmx2 2 TLSITVISGQFLSER----------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 71 (122)
T ss_dssp EEEEEEEEEESCCSS----------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred EEEEEEEEeeCCCCC----------CCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEE
Confidence 699999999999631 2699999999998887543 34444 3 45699999976 444 57789999999
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|||+| +++||++++||++|++|||||||+|..|+++.+|+|||||++.+
T Consensus 72 f~V~D~d----~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l~~~~L~v~i~~~~ 122 (122)
T d2zkmx2 72 VAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEMKD 122 (122)
T ss_dssp EEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEEEC
T ss_pred EEEECCC----CCEEEEEEEEcccCcCCceEEEccCCCcCCCCCceEEEEEEEEC
Confidence 9999976 79999999999999999999999999999999999999999864
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=5.7e-26 Score=205.32 Aligned_cols=127 Identities=29% Similarity=0.475 Sum_probs=112.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
..|+|+|++|++|+.. ..+..+.+||||+|++.|.+.+..+++|++++++ +||+|||+|+|.+..++.+.|+|.|
T Consensus 4 ~~l~V~Vi~a~~L~~~----~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V 79 (131)
T d1qasa2 4 ERLRVRIISGQQLPKV----NKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 79 (131)
T ss_dssp EEEEEEEEEEESCCCC----C-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred EEEEEEEEEeeCCCCC----CCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEE
Confidence 4699999999999742 2344567899999999998888888999998766 7999999999999999999999999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
||+|..+++++||++++||+++++||||+||+|..|+++..++|||||++.+
T Consensus 80 ~D~d~~~~d~~iG~~~i~l~~l~~g~~~~~L~~~~g~~~~~~~L~v~i~~~d 131 (131)
T d1qasa2 80 EDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISIQD 131 (131)
T ss_dssp EECCTTTCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred EEecCCCCCcEEEEEEEEEeccCCCCEEEECCCCCcCCCCCCEEEEEEEEEC
Confidence 9999988899999999999999999999999999999999999999999853
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.70 E-value=9.6e-18 Score=142.36 Aligned_cols=89 Identities=22% Similarity=0.294 Sum_probs=77.4
Q ss_pred CCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCC
Q 007473 21 EAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTD 100 (602)
Q Consensus 21 ~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~ 100 (602)
.+++|+||..||.+|++++..||+++|.+||+++|+++.++.+.|.+||++|++... ...++.||++||++||+|+
T Consensus 3 ~l~~R~ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~---~~~~~~ls~~gF~~fL~S~- 78 (94)
T d1qasa1 3 MLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET---AKAQRQMTKDGFLMYLLSA- 78 (94)
T ss_dssp TTSCCHHHHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHH---HHHTTBCCHHHHHHHHHSS-
T ss_pred CCCccHHHHHHHHHHhCCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHh---hhhcCCcCHHHHHHHHcCc-
Confidence 467899999999999999899999999999999999988899999999999985422 1235789999999999996
Q ss_pred CCCCC---CCCCCcCC
Q 007473 101 LNPPL---GNQVYQDM 113 (602)
Q Consensus 101 ~n~~~---~~~v~qdM 113 (602)
.|+++ +..|||||
T Consensus 79 ~N~i~~p~~~~V~qDM 94 (94)
T d1qasa1 79 DGNAFSLAHRRVYQDM 94 (94)
T ss_dssp TTBSBCGGGGSCCSCC
T ss_pred ccCCCCccccccCCCC
Confidence 47655 78899999
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=9.7e-17 Score=142.75 Aligned_cols=118 Identities=19% Similarity=0.328 Sum_probs=98.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+. ..|.|.||
T Consensus 6 G~L~V~v~~A~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~-~~L~i~V~ 73 (126)
T d2ep6a1 6 GILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVF 73 (126)
T ss_dssp EEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEcCC-----eEEEEEeeCCceeEEEEEEEEEEEeccC-ceeEEEEE
Confidence 579999999999964 23456789999999853 5789999999999999999999987654 67999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|++..+++++||++.++|+.+..|. ++.+|....++.-..++|.|++++.
T Consensus 74 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~l~~~~~~~~~~G~i~l~~~~i 124 (126)
T d2ep6a1 74 DEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 124 (126)
T ss_dssp EEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EccCCcCcceEEEEEEEHHHCCCCCceEEEccccCCCCceeEEEEEEEEEE
Confidence 9998888899999999999999886 5567766666655567888888875
|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from cytosolic phospholipase A2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.1e-15 Score=135.49 Aligned_cols=106 Identities=18% Similarity=0.263 Sum_probs=86.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
.+|+|+|+.|++|+.. ...+..+.+||||+|.+.+.. ..++||+++.++.||+|||+|.|.+..+....|+|.||
T Consensus 3 ~~l~V~v~~a~~L~~~---~~~d~~~~~Dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~ 77 (126)
T d1rlwa_ 3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEEccCCCCc---cccccCCCCCcEEEEEECCcc--cceeEeeecCCCccceeceeeeecccCcccCcEEEEEE
Confidence 5699999999999742 112445678999999986432 34678999999999999999999998777778999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCccE---EEEccC
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGIH---AVPLFD 578 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~GyR---~ipL~d 578 (602)
|+|..+ +++||++.++|+.|..|.+ +++|.+
T Consensus 78 d~d~~~-d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 111 (126)
T d1rlwa_ 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 111 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT
T ss_pred ECCCCC-CCeEEEEEEEHHHccCCCeEEEEEEccC
Confidence 998654 8999999999999988854 467754
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.59 E-value=2.3e-15 Score=134.77 Aligned_cols=106 Identities=17% Similarity=0.288 Sum_probs=89.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|+|+|+.|++|+.. +..+.+||||+|.+.+.+....+++|++++++.||+|||+|.|.+..++. ..|.|.|
T Consensus 15 ~~L~V~V~~a~~L~~~------d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 88 (132)
T d1a25a_ 15 EVLIVVVRDAKNLVPM------DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 88 (132)
T ss_dssp SEEEEEEEEEESCCCC------STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEeeeCCCCC------CCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEE
Confidence 4699999999999742 34566899999999876666678899999999999999999999876554 5799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc-c-EEEEccC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG-I-HAVPLFD 578 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G-y-R~ipL~d 578 (602)
||+|..+++++||.+.++|..|..+ . .|.+|.+
T Consensus 89 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~W~~L~~ 123 (132)
T d1a25a_ 89 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 123 (132)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred EecCCCCCCcEeEEEEEeHHHcCCCCCCeEEECCC
Confidence 9999988899999999999998654 3 3678876
|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: E3 ubiquitin-protein ligase Itchy species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1e-14 Score=131.04 Aligned_cols=120 Identities=19% Similarity=0.234 Sum_probs=93.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
+.+|.|+|++|++++.. +..+.+||||+|.+.+ .+++|++++++.||+|||.|.|.+.. ...|.|.|
T Consensus 5 ~~~L~v~v~~A~~~~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~~~~--~~~l~~~V 71 (133)
T d2nq3a1 5 KSQLQITVISAKLKENK------KNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRV 71 (133)
T ss_dssp CEEEEEEEEEEEECCCC--------CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEE
T ss_pred ceEEEEEEEEeECCCcC------CCCCCcCeEEEEEECC-----eEEeeEEEEecccEEEcceEEEEEEe--cceeEEEE
Confidence 46799999999987531 3345689999999865 46799999999999999999999853 35799999
Q ss_pred EecCCCCCCCccEEEEEeCCCcc---C-----ccEEEEccCCCCCccCCeEEEEEEEEEEc
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLR---P-----GIHAVPLFDRKGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~---~-----GyR~ipL~d~~g~~l~~asL~v~i~~~e~ 598 (602)
||+|..++|++||++.++|..+. . ....+.|....+.....+.|.|.++...+
T Consensus 72 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~~~~~~~~~G~L~v~l~~~~~ 132 (133)
T d2nq3a1 72 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 132 (133)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred EEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCCCCCCceEEEEEEEEEeeEEc
Confidence 99999888999999999998762 2 23345556666666666888888776544
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=1.7e-14 Score=129.61 Aligned_cols=117 Identities=16% Similarity=0.275 Sum_probs=91.0
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
.++|+|+|++|++|+. .+.++.+||||+|.+.+ .+++|+++++ +.||+|||+|.|.+..++ ..|+|.
T Consensus 9 ~G~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~t~~~~~~~~nP~Wne~f~f~v~~~~-~~L~v~ 76 (136)
T d1wfja_ 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEESSC-CEEEEE
T ss_pred cEEEEEEEEEeeCCCC------CCCCCCCCccEEEEEee-----eeEEEEEEecCCCcEEEeeEEEEEEcCcc-ceEEEE
Confidence 3689999999999953 24567789999999754 4667888875 689999999999998654 359999
Q ss_pred EEecCCCCCCCccEEEEEeCCCcc-Ccc---EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLR-PGI---HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~-~Gy---R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|||+|..+++++||++.+||..+. .|. .+.+|. ..++. .+.|.+.++|.+
T Consensus 77 V~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~-~~~~~--~G~i~l~l~~~p 130 (136)
T d1wfja_ 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEY--KGEIWVALSFKP 130 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEE--EEEEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEec-CCCcc--CEEEEEEEEEEe
Confidence 999998888999999999999873 333 345554 22332 378999999876
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=1.4e-14 Score=130.06 Aligned_cols=113 Identities=12% Similarity=0.168 Sum_probs=89.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|+.|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~v~~a~nL~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v 87 (137)
T d2cm5a1 14 QGGLIVGIIRCVHLAAM------DANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 87 (137)
T ss_dssp TTEEEEEEEEEESCCCC------STTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEECCCCC------CCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEE
Confidence 35699999999999742 33466899999999864445567799999999999999999999876654 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEE-EEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHA-VPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~-ipL~d~~g~~l 584 (602)
.|||.+..+++++||++.++++.+..+..| .+|.+..++++
T Consensus 88 ~v~~~~~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~v 129 (137)
T d2cm5a1 88 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKI 129 (137)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCE
T ss_pred EeeeCCCCCCCCEEEEEEeCccccCcchhhhhhHhhCCCCee
Confidence 999999888899999999999988766543 46666666553
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=8e-15 Score=132.24 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=87.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
.+|.|+|+.|++|+.. +..+.+||||+|.+........++||++++++.||.|||+|.|.+...++ ..|.|.
T Consensus 15 ~~L~V~v~~a~~L~~~------~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i~ 88 (138)
T d1w15a_ 15 NTLTVVVLKARHLPKS------DVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 88 (138)
T ss_dssp TEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred CEEEEEEEEeECCCCC------CCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEEEEE
Confidence 4699999999999642 34466899999999754444456789999999999999999999876654 469999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccEE-EEccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHA-VPLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR~-ipL~d~~g~~l 584 (602)
|||+|..+++++||++.+++.+...|.+| ..|.+..++++
T Consensus 89 v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~ll~~~~k~i 129 (138)
T d1w15a_ 89 VLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 129 (138)
T ss_dssp EEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEeCCCCCCCCEEEEEEEcchhCCchHHHHHHHHhCCCCee
Confidence 99999888899999999999988777665 35555555543
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=5.9e-14 Score=127.23 Aligned_cols=104 Identities=20% Similarity=0.214 Sum_probs=85.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|+.|++|+.. +..+.+||||+|.+.+. ...+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~V~V~~a~~L~~~------~~~g~~dpyV~v~l~~~--~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i 104 (143)
T d1rsya_ 33 NNQLLVGIIQAAELPAL------DMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEESCCCC------STTSCCCEEEEEEEETT--CCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEccCCCCC------CCCCCCCeEEEEEEcCC--CCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEEE
Confidence 35799999999999642 34466899999999753 3456799999999999999999999876543 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLF 577 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~ 577 (602)
.|||++..+++++||++.++|..+..|. .|.+|.
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~ 141 (143)
T d1rsya_ 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred EEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCC
Confidence 9999998888999999999999997664 455664
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=5e-14 Score=127.12 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=85.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC---------cccccccCCCCCCCCeeccEEEEEee-cC
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD---------KKMKSTKKKVDNWTPVWDDEFTFPLT-IP 536 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d---------~~k~kTkvi~nn~nPvWNEtf~F~v~-~p 536 (602)
+.|.|+|+.|++|+.. +..+.+||||+|.+.+.... ..++||++++++.||.|||+|.|.+. ..
T Consensus 18 ~~L~V~V~~A~~L~~~------d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 91 (142)
T d1rh8a_ 18 GNLIIHILQARNLVPR------DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCCC------SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEeECCCCc------CCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeeccc
Confidence 4699999999999742 34566899999998643322 23468999999999999999999843 22
Q ss_pred C--ccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCC
Q 007473 537 E--MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRK 580 (602)
Q Consensus 537 e--la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~ 580 (602)
+ ...|.|.|||+|..+++++||++.++|..+..+- +|.+|.+..
T Consensus 92 ~~~~~~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~~~W~~L~~~~ 140 (142)
T d1rh8a_ 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred ccCCCEEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCceEEEECcCcC
Confidence 2 3579999999998888999999999999986553 678888764
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=4.5e-14 Score=130.15 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=81.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|+.|++|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~V~~a~~L~~~------~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i 97 (157)
T d1uowa_ 24 AGKLTVVILEAKNLKKM------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (157)
T ss_dssp TTEEEEEEEEEESCCCC------STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEEEcccc------cCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEEEE
Confidence 35799999999999642 33466899999998753333345689999999999999999999987765 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|||.+..+++++||++.|++.+...+
T Consensus 98 ~v~d~~~~~~~~~iG~~~i~l~~~~~~ 124 (157)
T d1uowa_ 98 TVLDYDKIGKNDAIGKVFVGYNSTGAE 124 (157)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCHHH
T ss_pred EEcccCCCCCCceeEEEEEecccCChh
Confidence 999999988899999999999886544
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=1.4e-13 Score=122.71 Aligned_cols=105 Identities=16% Similarity=0.217 Sum_probs=82.3
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|+.|++|+.. +..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 17 ~~~L~V~V~~a~~L~~~------~~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v 88 (130)
T d1dqva1 17 SDQLVVRILQALDLPAK------DSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 88 (130)
T ss_dssp SCEEEEEEEEEECCCCC------STTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEeeeCCccc------cCCCCcceEEEEEEcc--CCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEE
Confidence 35799999999999642 3446689999999864 23456899999999999999999999876654 46999
Q ss_pred EEEecCCCCCCCccEEEEEeCCC-ccC----ccEEEEccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQ-LRP----GIHAVPLFD 578 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~-L~~----GyR~ipL~d 578 (602)
+|||++..+++++||++.|++.. +.. .-.|.+|.+
T Consensus 89 ~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~~ 128 (130)
T d1dqva1 89 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE 128 (130)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred EEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEeccc
Confidence 99999988889999999998643 222 123677765
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4e-13 Score=121.00 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=85.3
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
..|.|+|+.|.+|+. .+.+||||+|.+.+. .+..+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 26 ~~L~V~v~~a~~L~~---------~g~~dpyVkv~l~~~-~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~~ 95 (138)
T d1wfma_ 26 AELFVTRLEAVTSNH---------DGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLT 95 (138)
T ss_dssp TEEEEEEEEEECCCC---------SSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEE
T ss_pred CEEEEEEEEcCCCCC---------CCCcCcEEEEEECCC-CCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEEE
Confidence 469999999998842 234799999999753 23346789999999999999999999876654 579999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCC
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRK 580 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~ 580 (602)
|||++..+++++||++.|+|..+..+ -.|.+|....
T Consensus 96 V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~~~~ 134 (138)
T d1wfma_ 96 LRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp EEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred EeeecccccceeeeEEEEEhHHccCCCCceEeEeCCCCC
Confidence 99999888899999999999998643 3678887644
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.9e-13 Score=119.67 Aligned_cols=105 Identities=18% Similarity=0.228 Sum_probs=79.0
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lr 542 (602)
...|.|+|+.|++|+.. +..+.+||||+|.+.+......++||++++++.||.|||+|.|. +...++ ..|.
T Consensus 13 ~~~L~V~V~~a~~L~~~------~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~ 86 (125)
T d2bwqa1 13 GHQLIVTILGAKDLPSR------EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 86 (125)
T ss_dssp TTEEEEEEEEEESCCCC------TTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeECCCCc------CCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEE
Confidence 35699999999999742 33466899999999765455567899999999999999999997 554444 4799
Q ss_pred EEEEecCCC--CCCCccEEEEEeCCCccCc--cEEEEc
Q 007473 543 VEVRKYSMP--EKDEFAGQTCLPVFQLRPG--IHAVPL 576 (602)
Q Consensus 543 f~V~D~d~~--~~dd~lGq~~lpL~~L~~G--yR~ipL 576 (602)
|.|||.+.. .++++||++.+||+.+... -.|.||
T Consensus 87 i~v~d~~~~~~~~~~~iG~~~i~l~~~~~~~~~~Wy~L 124 (125)
T d2bwqa1 87 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 124 (125)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCCCCCCCCeeEEEEEEEchhcCCCCCCEEEeC
Confidence 999998864 3456999999999987632 245565
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.42 E-value=6.6e-13 Score=119.39 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=91.1
Q ss_pred ceeEEEEEEeccCcccCccC-----cCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQ-----MDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMAL 540 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~-----~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~ 540 (602)
.+.|+|+|+.|++|+..... ......+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+ ..
T Consensus 5 ~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~----~~~~~T~~~~~t~~P~Wne~f~f~v~~~--~~ 78 (136)
T d1gmia_ 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred EEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCC----CcCcEeeEEcCCCCccCccEEEEEEecC--Cc
Confidence 46799999999999742100 0112335579999999953 2446899999999999999999998654 57
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCccC-c----cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLRP-G----IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~-G----yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|.|||++..+++++||++.++|+.+.. + -+|++|. +.+++.++|++..
T Consensus 79 l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------p~G~v~l~v~~~~ 133 (136)
T d1gmia_ 79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE-------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB-------SSCEEEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeCC-------CCcEEEEEEEEEe
Confidence 99999999988889999999999998842 2 3577885 2467888888764
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=1.7e-12 Score=116.81 Aligned_cols=95 Identities=17% Similarity=0.276 Sum_probs=77.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALL 541 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~L 541 (602)
...|.|+|+.|++|+.. +.. ..+||||+|.+.+ ....++||++++++.||.|||+|.|. +...++ ..|
T Consensus 21 ~~~L~V~V~~a~~L~~~------d~~~~~~dpyV~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L 92 (138)
T d1ugka_ 21 RKAFVVNIKEARGLPAM------DEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCCC------BTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEecCCCCC------CCCCCccceEEEEEEcC--CCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceE
Confidence 34699999999999742 122 3469999999975 33456789999999999999999997 444444 479
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
+|.|||.|..+++++||++.++|+.+.
T Consensus 93 ~~~V~d~d~~~~~~~iG~~~i~L~~~~ 119 (138)
T d1ugka_ 93 HFTILSFDRFSRDDIIGEVLIPLSGIE 119 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCC
T ss_pred EEEEEECCCCCCCcEEEEEEEEccccc
Confidence 999999998888999999999999974
|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Unc-13 homolog A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=3.8e-12 Score=113.36 Aligned_cols=112 Identities=20% Similarity=0.219 Sum_probs=84.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|..|+++... +..||||+|.+.+ .+.+|+++++ .||+|||+|.|.+..++ ..|.|.||
T Consensus 2 ~~L~V~v~~a~~l~~~---------~~~dpYv~l~~~~-----~k~~T~~~k~-~nP~Wne~f~f~v~~~~-~~L~v~V~ 65 (128)
T d2cjta1 2 SLLCVGVKKAKFDGAQ---------EKFNTYVTLKVQN-----VKSTTIAVRG-SQPSWEQDFMFEINRLD-LGLTVEVW 65 (128)
T ss_dssp EEEEEEEEEEECSSCG---------GGCEEEEEEEETT-----EEEECCCEES-SSCEEEEEEEEEECCCS-SEEEEEEE
T ss_pred eEEEEEEEEEECCCCC---------CCcCeEEEEEeCC-----EEEEEEEecC-CCCeEEEEEEEeecccc-ceEEEEEE
Confidence 3599999999988531 1369999999853 5778888764 59999999999998775 46889999
Q ss_pred ecCCCCCCCccEEEEEeCCCccC----cc-EEEEccCC----CCCc-----cCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRP----GI-HAVPLFDR----KGEE-----LGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~----Gy-R~ipL~d~----~g~~-----l~~asL~v~i~~ 595 (602)
|++.. +|++||++.|||+.+.. |. .|++|... .|+. ..+.+|+++..|
T Consensus 66 d~~~~-~d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~~~~~~~~ll~~~~ 127 (128)
T d2cjta1 66 NKGLI-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 127 (128)
T ss_dssp ECCSS-CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred eCCCc-CCcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeeecCCCcEEEEEEEc
Confidence 99876 48999999999999853 23 58888532 2332 235788887766
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.31 E-value=2.9e-13 Score=122.76 Aligned_cols=113 Identities=12% Similarity=0.146 Sum_probs=88.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|+.|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 19 ~~~L~V~V~~a~nL~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v 92 (145)
T d1dqva2 19 AGLLTVTIIKASNLKAM------DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 92 (145)
T ss_dssp TTEEEEEEEEEESCCCC------SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred CCEEEEEEEEEeCCCCc------CCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEEEE
Confidence 35799999999999642 33456799999999875555557789999999999999999998865443 56999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc-CccEE-EEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR-PGIHA-VPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~-~GyR~-ipL~d~~g~~l 584 (602)
.|+|++..+++++||++.|++..+. .|..| .+|.+..++++
T Consensus 93 ~v~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~l~~~p~~~i 135 (145)
T d1dqva2 93 AVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 135 (145)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred EEEecCCCCCCcEEEEEEECchHcCchhhHHHHHHHhCCCCee
Confidence 9999998888999999999999874 34443 35555445443
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Probab=99.20 E-value=2.5e-12 Score=129.49 Aligned_cols=137 Identities=11% Similarity=0.151 Sum_probs=99.3
Q ss_pred CCcccccccccCCcc--cccCCcc---CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHH
Q 007473 114 TAPLSHYFIYTGHNS--YLIGNQF---SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 114 ~~PLs~YfI~SSHNT--YL~g~Ql---~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
+.||+++.|-.|||+ |-++..+ .+.+-...+...|..|+|+++|||+..++ +++.++||.. ...++|.|||+.
T Consensus 20 ~~~l~~l~ipGtHnS~t~~~~~~~~~~~s~~Q~~~i~~QL~~GvR~fDlrv~~~~~-~~~~~~Hg~~-~~~~~l~~vL~~ 97 (296)
T d2ptda_ 20 SIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPL-YLYVTLHEFINE 97 (296)
T ss_dssp TSBTTTSCEEEETTGGGTTCCCHHHHHHHCCCSSCHHHHHTTTCCEEEEEEEECTT-SCEEEEETTE-EEEEEHHHHHHH
T ss_pred CceeeheEeccccccccccCCCCcccccccCccchHHHHHHhCCcEEEEeeeecCC-CceEEEeCCc-cCCCcHHHHHHH
Confidence 569999999999997 4444322 12333456789999999999999986544 5688999864 445789999999
Q ss_pred HhhcccccCCCceEEEecCCCCH--HHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhccccEEEecC
Q 007473 189 IKENAFSASPYPVILTFEDHLNP--HLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 255 (602)
|+.+......-.|||+|+.++.. .....+.+.+.+.|++.... -.....|++.+++||+++...
T Consensus 98 i~~Fl~~np~EvVil~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~ptL~e~~~k~~~l~~ 163 (296)
T d2ptda_ 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIF---LKTEGNIKLGDARGKIVLLKR 163 (296)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTB---CCCCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHhCCCceEEEEEEeccCCccchHHHHHHHHHHHhccCccc---ccCCCCCChHHHccceeEEEE
Confidence 99999999899999999988743 22223444444444433221 123578999999999977654
|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C delta species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.17 E-value=8.2e-11 Score=103.77 Aligned_cols=94 Identities=14% Similarity=0.177 Sum_probs=74.8
Q ss_pred CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc--
Q 007473 491 WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR-- 568 (602)
Q Consensus 491 ~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~-- 568 (602)
.+.+||||+|.+.+......+++|++++++.||+|||+|+|.|.. ...|.|.|||+| ++++|...+++..|.
T Consensus 21 ~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~--~~~l~i~V~d~d----d~~~g~~~i~l~~l~~~ 94 (123)
T d1bdya_ 21 DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EDPMSEVTVGVSVLAER 94 (123)
T ss_dssp CCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHHH
T ss_pred CCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc--ccEEEEEEEEcc----ccccCccEEehhheeec
Confidence 456899999999775444456678999999999999999999864 357999999986 789999999998873
Q ss_pred ---Ccc---EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 569 ---PGI---HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 569 ---~Gy---R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
.|- -|++|. +.|+|++.++|.+
T Consensus 95 ~~~~~~~~~~W~~L~-------~~Gkl~l~v~~f~ 122 (123)
T d1bdya_ 95 CKKNNGKAEFWLDLQ-------PQAKVLMCVQYFL 122 (123)
T ss_dssp HHTTTTEEEEEEECB-------SSCEEEEEEEEEE
T ss_pred cccCCCcccEEEeCC-------CCEEEEEEEEEec
Confidence 232 466774 3478999999876
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Probab=98.85 E-value=1.5e-09 Score=108.01 Aligned_cols=136 Identities=14% Similarity=0.253 Sum_probs=105.5
Q ss_pred CCcccccccccCCcccccCCccCCC-------CChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSD-------CSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCL 186 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~-------Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi 186 (602)
+.||+|..|-.|||++=......+. .--..+..-|..|+|.++|++++ +..++||.... ..+|.||+
T Consensus 13 ~~~l~~l~ipGtHnS~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GvR~~dlr~~~-----~~~~~Hg~~~~-~~~~~~~L 86 (274)
T d2plca_ 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIFL-NASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEEE-EEEHHHHH
T ss_pred CcEeeheecccccccccccCCCCCcccccccccccccHHHHHHhCCeEEEeeeCC-----ceEEEEEeecc-ceeHHHHH
Confidence 5699999999999995321111110 11113567899999999999974 47899997764 47899999
Q ss_pred HHHhhcccccCCCceEEEecC-CCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecC
Q 007473 187 RAIKENAFSASPYPVILTFED-HLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 187 ~aI~~~AF~~S~yPvILSlE~-Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 255 (602)
+.|+++--....-.|||.++. +.+.+....+++.+.+.||++++.++. .....+|+..+++|||+|-..
T Consensus 87 ~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ptl~e~~gk~vi~~~ 157 (274)
T d2plca_ 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCccccccCCCCChHHhCCCEEEEec
Confidence 999998777777899999964 777788888999999999999998653 334679999999999988653
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=2.5e-09 Score=99.14 Aligned_cols=79 Identities=22% Similarity=0.311 Sum_probs=51.9
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCC--------CCHHHHHHHHHHHhhhccccccccCCCcCHHHHH
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGG--------VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFH 93 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~ 93 (602)
..|+||..+|..|..+ ...||.++|.+||.++|+++. ++.+.|.++|.+|++... ...++.||++||+
T Consensus 75 ~~r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~ls~d~F~ 151 (170)
T d2zkmx1 75 CPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI---NAQRGQLSPEGMV 151 (170)
T ss_dssp SCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC-----------CCHHHHH
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccc---cccCCeECHHHHH
Confidence 5689999999999876 578999999999999999853 456789999999985421 1235689999999
Q ss_pred HHhcCCCCCCCC
Q 007473 94 HYLFSTDLNPPL 105 (602)
Q Consensus 94 ~~L~S~~~n~~~ 105 (602)
+||+|+ .|+++
T Consensus 152 ~fL~S~-en~i~ 162 (170)
T d2zkmx1 152 WFLCGP-ENSVL 162 (170)
T ss_dssp HHHHST-TSCSB
T ss_pred HHHcCc-cCCCC
Confidence 999986 57766
|
| >d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Putative glycerophosphodiester phosphodiesterase TTHB141 species: Thermus thermophilus [TaxId: 274]
Probab=96.40 E-value=0.0031 Score=58.00 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=35.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+-|.++|.+|+..||++||+|||=-.| +.|||+|..|+.
T Consensus 13 ~pENT~~a~~~a~~~G~~~iE~DV~~TkD-g~~vv~HD~~~~ 53 (217)
T d1vd6a1 13 AKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTP 53 (217)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEET
T ss_pred CCchhHHHHHHHHHcCCCEEEEEEEEecC-CCEEEecccccC
Confidence 45899999999999999999999996555 579999998765
|
| >d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase UgpQ species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.00 E-value=0.0024 Score=60.40 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
-+.|.++|..|+..||++||+|+|=-.| +.|||+|..++
T Consensus 15 pENT~~a~~~A~~~G~~~iE~Dv~~TkD-g~~Vv~HD~~l 53 (240)
T d1zcca1 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETL 53 (240)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBT
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEEecC-CCEEEeccccc
Confidence 3789999999999999999999997555 57999999876
|
| >d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Hypothetical protein TM1621 species: Thermotoga maritima [TaxId: 2336]
Probab=95.03 E-value=0.0097 Score=55.19 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|..|+..||+.||+|++--.| +.|||+|..|+
T Consensus 17 ~pENT~~af~~a~~~g~~~iE~Dv~~T~D-g~~Vv~HD~~l 56 (226)
T d1o1za_ 17 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDL 56 (226)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEE
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEccC-CCEEeecccee
Confidence 45789999999999999999999997656 57999999886
|
| >d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase GlpQ species: Escherichia coli [TaxId: 562]
Probab=94.92 E-value=0.009 Score=58.14 Aligned_cols=40 Identities=25% Similarity=0.328 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-|.|.++|..|+..||-+||+|||=-.| +.|||+|..+|.
T Consensus 16 PENTl~af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 55 (328)
T d1ydya1 16 PEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLD 55 (328)
T ss_dssp STTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCT
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeEccC-CcEEEECCchhh
Confidence 3889999999999999999999996555 579999999884
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.79 E-value=0.01 Score=46.37 Aligned_cols=67 Identities=18% Similarity=0.280 Sum_probs=48.6
Q ss_pred CchhHHHHHHHhhC---CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAE---GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~---~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...+|..+|++|+. +..+|+.++|+..|+..-.....+.+.+..++...-. -+.+.+++++|..+|.
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~-------d~dG~Idf~EF~~l~~ 74 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDK-------NGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCC-------CSSSSEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcC-------CCCCcCcHHHHHHHHH
Confidence 45789999999974 2368999999999998643323344556777776431 1346799999998874
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.05 E-value=0.037 Score=42.54 Aligned_cols=68 Identities=13% Similarity=0.259 Sum_probs=49.6
Q ss_pred CCchhHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 23 GPPADVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 23 ~~r~el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+++.||..+|+.|..+ ...|+.++|+..|+..-.....+..++.+++..+-.. +.+.+++++|+.+|.
T Consensus 2 ~s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d-------~dG~I~f~EF~~~m~ 72 (76)
T d1qx2a_ 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKN-------GDGEVSFEEFLVMMK 72 (76)
T ss_dssp CCHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTT-------CSSEECHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcC-------CCCcCcHHHHHHHHH
Confidence 4678999999999643 4789999999999875322222334578888876522 346899999999874
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=93.82 E-value=0.078 Score=45.04 Aligned_cols=65 Identities=14% Similarity=0.334 Sum_probs=51.8
Q ss_pred chhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|+.|-. +...|+.++|+.+|.... . ..+.+++.+|+..+... +.+.+++++|.++|+|
T Consensus 81 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~i~~~~D~d-------~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 81 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG-E-KLTDDEVDEMIREADID-------GDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCSS-------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh-h-cCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHhcC
Confidence 3578889999954 468999999999998644 3 47889999999987522 2468999999999986
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=93.79 E-value=0.071 Score=41.47 Aligned_cols=67 Identities=12% Similarity=0.330 Sum_probs=53.5
Q ss_pred CCCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 22 AGPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+..+|..+|..|=.+ ...|+.++|+..|+.. +. ..+.+++..++..+-.. +.+.+++++|..+|-
T Consensus 11 ~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~ev~~~~~~~D~d-------~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GE-TITEDDIEELMKDGDKN-------NDGRIDYDEFLEFMK 78 (81)
T ss_dssp CCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTS-SS-CCCHHHHHHHHHHHCSS-------SSSSEEHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhc-CC-CCCHHHHHHHHHHHCCC-------CCCcEeHHHHHHHHH
Confidence 34567899999999654 5899999999999863 44 47889999999987522 346799999999985
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=93.76 E-value=0.068 Score=40.98 Aligned_cols=67 Identities=9% Similarity=0.271 Sum_probs=53.9
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++.+|..+|..|-.+ ...|+.++|+..|+.... ..+.+++.+++..+-.. +.+.|++++|.++|..
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~e~~~~~~~~D~d-------~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE--NLTEEELQEMIAEADRN-------DDNEIDEDEFIRIMKK 73 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC--CCCHHHHHHHHHHHCCS-------SSSEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCC--CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHHc
Confidence 4567899999999654 589999999999998664 36888999999886522 3468999999999864
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=93.55 E-value=0.094 Score=42.07 Aligned_cols=64 Identities=11% Similarity=0.232 Sum_probs=48.4
Q ss_pred hhHHHHHHHhhCC---CCccCHHHHHHHHHHH----hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG---GTHMTAEQLWQFLVEV----QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~---~~~l~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|.+|+.. ..+|+.++|+..|+.. -+. ..+.+.+.+|+..+-.+ +.+.+++++|..+|.
T Consensus 9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~-~~~~~~~~~i~~~~D~n-------~DG~I~F~EF~~lm~ 79 (93)
T d3c1va1 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQKLMSNLDSN-------RDNEVDFQEYCVFLS 79 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTT-CCSHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhcccc-CCCHHHHHHHHHHHcCC-------CCCCCCHHHHHHHHH
Confidence 3578899999852 3479999999999863 222 35788899999987532 346799999998775
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=93.50 E-value=0.079 Score=42.96 Aligned_cols=65 Identities=9% Similarity=0.180 Sum_probs=48.2
Q ss_pred hhHHHHHHHhhC--C-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE--G-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~--~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|++|+. + ..+||.++|+..|+++=.....+.+.+.+++...-.. +.+.+++++|..+|.
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d-------~DG~IdF~EF~~l~~ 81 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVN-------QDSELKFNEYWRLIG 81 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTT-------CCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCC-------CCCcCCHHHHHHHHH
Confidence 367889999974 2 3799999999999976433234556688888876421 346899999998885
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=93.11 E-value=0.12 Score=41.48 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=47.2
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|++|++. +.+|+.++|++.|+.+=..- ..+.+.+.+++...-.. +.+.+++++|..+|.
T Consensus 10 ~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n-------~Dg~IdF~EF~~l~~ 79 (93)
T d1ksoa_ 10 AIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN-------KDCEVDFVEYVRSLA 79 (93)
T ss_dssp HHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHT-------TTCEECHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCC-------CCCCCcHHHHHHHHH
Confidence 477899999853 34799999999998753221 23567788888886532 346799999998775
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=92.67 E-value=0.13 Score=40.79 Aligned_cols=64 Identities=11% Similarity=0.170 Sum_probs=46.2
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|++|+.. ..+|+.++|+..|+++=..- ..+++.+.+++...-.. +.+.++|++|..++.
T Consensus 9 ~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n-------~Dg~idF~EF~~li~ 78 (87)
T d1e8aa_ 9 GIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN-------QDEQVDFQEFISLVA 78 (87)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTT-------CSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCC-------CCCcCCHHHHHHHHH
Confidence 578899999853 35799999999998743211 23567788888775421 356899999988764
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=92.54 E-value=0.17 Score=38.63 Aligned_cols=68 Identities=15% Similarity=0.292 Sum_probs=54.2
Q ss_pred CCCchhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 22 AGPPADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 22 ~~~r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+..+|..+|..|=. +...|+..+|+..|+.. +. ..+.+++..++..+-.. +.+.++++.|.++|.+
T Consensus 5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-g~-~~~~~e~~~~~~~~D~d-------~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 5 GKSEEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVIEEDIEDLMKDSDKN-------NDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHCSS-------SCSEECHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-CC-CccHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHHh
Confidence 4456799999999954 46999999999999874 34 57899999999987522 2467999999999853
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=92.28 E-value=0.13 Score=41.10 Aligned_cols=65 Identities=14% Similarity=0.139 Sum_probs=48.5
Q ss_pred hhHHHHHHHhhCCCCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|.+|.+++..|+.++|..-|...... ...+.+.+..|+..+-.. +.+.+++++|..+|.
T Consensus 9 e~l~~~F~~yd~ddG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n-------~DG~I~F~EF~~li~ 76 (92)
T d1a4pa_ 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC-------RDGKVGFQSFFSLIA 76 (92)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTT-------SSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCC-------CCCCCcHHHHHHHHH
Confidence 46889999999888999999999999763211 013456788888876422 357899999998874
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=91.65 E-value=0.081 Score=39.74 Aligned_cols=64 Identities=8% Similarity=0.197 Sum_probs=51.2
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.||..+|..|-.+ ...|+.++|+..|+..- ...++.+++..++..+-.. +.+.+++++|..+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g-~~~~s~~e~~~~~~~~D~d-------~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVG-EEPLTDAEVEEAMKEADED-------GNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTT-TCCCCHHHHHHHHHHHCSS-------GGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhC-CCCCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHH
Confidence 4789999999755 58999999999998653 3347899999999887532 246899999998874
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=91.61 E-value=0.37 Score=37.78 Aligned_cols=64 Identities=11% Similarity=0.173 Sum_probs=44.7
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCC----CCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHGG----VSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~~----~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-|..+|++||+. ...|+..+|+.+|+++=..-. .++..+..++...-.. +.+.++|.+|..++.
T Consensus 11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n-------~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTN-------ADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCC-------CCCcCcHHHHHHHHh
Confidence 477899999953 479999999999998543211 1233456677665421 346799999998774
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=91.57 E-value=0.15 Score=41.78 Aligned_cols=68 Identities=13% Similarity=0.187 Sum_probs=53.2
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhC-CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQG-HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+..+|+.+|+.|-.+ ..+|+.++|+.+|++-.. ....+.++++.+|+.+... +.+.+++++|..+|.
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d-------~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 37 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKD-------GDGMIGVDEFAAMIK 106 (107)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHc
Confidence 4567899999999655 589999999999976422 1246889999999987532 346899999999885
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.52 E-value=0.082 Score=43.52 Aligned_cols=69 Identities=14% Similarity=0.292 Sum_probs=54.0
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh-CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ-GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+..+++.+|+.|-.+ ..+|+.++|+.+|..-. ....++.+.++.+++.+-.. +.+.+++++|...|.|
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d-------~dG~I~~~EF~~~m~s 108 (108)
T d1rroa_ 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND-------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCS-------SSSSEEHHHHHHHHTC
T ss_pred CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHcC
Confidence 3567899999999755 58999999999997642 22346888999999987522 3468999999999864
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=91.47 E-value=0.41 Score=38.02 Aligned_cols=64 Identities=9% Similarity=0.230 Sum_probs=45.9
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|++||+. ..+|+..+|+.+|+++=.. ...+++.+..++...-.. +.+.++|++|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n-------~Dg~vdF~EF~~li~ 79 (90)
T d3cr5x1 10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-------GDGECDFQEFMAFVA 79 (90)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTT-------SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCC-------CCCcCCHHHHHHHHH
Confidence 477899999853 4689999999999875321 123456677787775421 346799999988764
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=91.22 E-value=0.051 Score=44.26 Aligned_cols=64 Identities=13% Similarity=0.223 Sum_probs=45.8
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCC-----CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGH-----GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~-----~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|++|+++...|+.++|+..|+.+... ...+++.+..|+...-.. +.+.+++++|..+|.
T Consensus 11 ~l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n-------~DG~I~F~EF~~li~ 79 (100)
T d1psra_ 11 GMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKN-------EDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTT-------CSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCC-------CCCcCcHHHHHHHHH
Confidence 5788999999878899999999999875321 011234456677665421 346899999998875
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=90.85 E-value=0.11 Score=41.18 Aligned_cols=64 Identities=11% Similarity=0.138 Sum_probs=46.4
Q ss_pred hhHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|++|++. +..++.++|+.+|..+=+. ..+.+.+.++|...-. -+.+.+++++|..++.
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~-~~~~~~v~~i~~~~D~-------n~DG~IdF~EF~~l~~ 76 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKGADVWFKELDI-------NTDGAVNFQEFLILVI 76 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTCHHHHHHHHCT-------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCC-ccchHHHHHHHHHhCC-------CCCCcCcHHHHHHHHH
Confidence 3578899999852 3578999999999875333 2344567788877532 1357899999998875
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.77 E-value=0.3 Score=43.04 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=49.4
Q ss_pred HHHHHHHhhCCCCccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 28 VKEMFKKYAEGGTHMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 28 l~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
|..+|.++|+.+..+++++|+..|+..-... ..+.+.|+.++..+-.. +.+.|++++|...+
T Consensus 2 ~~~~F~~~a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~-------~~G~i~~~EF~~l~ 66 (165)
T d1k94a_ 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRD-------HTGKMGFNAFKELW 66 (165)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTT-------CSSCBCHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHh
Confidence 6789999998889999999999999764332 24678899999988522 34689999998765
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=90.54 E-value=0.23 Score=38.40 Aligned_cols=63 Identities=13% Similarity=0.336 Sum_probs=50.5
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.|++.+|..|-.+ ...|+.++|+..|+.-. ..+.+++.+++..+-.. +.+.++++.|..++.+
T Consensus 6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg---~~~~~ei~~~~~~~D~d-------~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 6 ADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD-------GDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT-------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh---cCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHHH
Confidence 4788899999755 58999999999998653 25888899999887532 3468999999998864
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=90.46 E-value=0.3 Score=41.31 Aligned_cols=67 Identities=15% Similarity=0.300 Sum_probs=53.5
Q ss_pred CCCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 22 AGPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.....+|...|+.|-.+ ...|+.++|+..|...- + .++.+++.++++.+.. ..+.++++.|++.|+|
T Consensus 72 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g-~-~lt~~e~~~l~~~~d~--------~dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLG-E-KLSNEEMDELLKGVPV--------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp SCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHH-S-CSCHHHHHHHHHHTTC--------SSCCSTTTHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcC-C-CCCHHHHHHHHHhhCC--------CCCEEeHHHHHHHHhc
Confidence 34556799999999654 58999999999998764 4 4799999999987641 2357999999999986
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=90.30 E-value=0.22 Score=39.47 Aligned_cols=64 Identities=8% Similarity=0.236 Sum_probs=47.5
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCC-CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGH-GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|++|++. ..+|+..+|+..++.+-.. ...+.+.+.+++...-.+ +.+.+++++|...+.
T Consensus 10 ~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d-------~Dg~IdF~EF~~l~~ 77 (89)
T d1k8ua_ 10 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRN-------KDQEVNFQEYVTFLG 77 (89)
T ss_dssp HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHT-------TTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCC-------CCCCCcHHHHHHHHH
Confidence 578899999852 3479999999999975432 123567788888886532 346799999998775
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=90.10 E-value=0.39 Score=36.98 Aligned_cols=62 Identities=16% Similarity=0.379 Sum_probs=48.9
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
|+...|..|=.+ ...|+.++|+..|+.. +. ..+.+++.+++..+... +.+.++++.|+.+|.
T Consensus 15 el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~s~~e~~~~~~~~D~d-------~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 15 EFKAAFDMFDADGGGDISTKELGTVMRML-GQ-NPTKEELDAIIEEVDED-------GSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCTT-------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEchhHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHH
Confidence 566778888544 5899999999999975 33 47889999999987532 246899999999874
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=89.96 E-value=0.3 Score=39.28 Aligned_cols=62 Identities=13% Similarity=0.240 Sum_probs=44.1
Q ss_pred hHHHHHHHhhC---CCCccCHHHHHHHHHH-----HhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAE---GGTHMTAEQLWQFLVE-----VQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~---~~~~l~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|.+||+ +..+|+..+|+..|++ .+.. .+.+.+..|+...-.. +.+.++|++|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~--~d~~~vd~im~~LD~n-------~Dg~vdF~EF~~li~ 79 (95)
T d1qlsa_ 10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQ--KDPGVLDRMMKKLDLD-------SDGQLDFQEFLNLIG 79 (95)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHC--CCTHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHhcCC-------CCCcCcHHHHHHHHH
Confidence 57789999995 3478999999998864 2221 2345677787775422 346799999987765
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=89.85 E-value=0.37 Score=39.46 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=53.0
Q ss_pred CCCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 22 AGPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+..+|..+|+.|=.+ ..+|+.++|+.+|+.-. ++ .++.+++.+++..+-.. +.+.+++++|.+.|.
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~~~~~e~~~~~~~~D~d-------~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDSD-------HDGKIGADEFAKMVA 107 (109)
T ss_dssp TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccC-cCCHHHHHHHHHHhCCC-------CCCCEeHHHHHHHHH
Confidence 34557899999999654 58999999999998642 33 47888999999887522 346899999999874
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=89.70 E-value=0.39 Score=38.01 Aligned_cols=65 Identities=8% Similarity=0.145 Sum_probs=48.8
Q ss_pred hhHHHHHHHhhCC---CCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..|..+|.+|+.. ...|+.++|+.-|+..-.. ...+.+.+..+++.+-.. +.+.+++++|..+|.
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d-------~dG~Idf~EF~~lm~ 79 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN-------GDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTT-------CCSEECSHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCC-------CCCCCcHHHHHHHHH
Confidence 4688999999642 2589999999999876432 134678888888876522 346799999998875
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=89.67 E-value=0.22 Score=40.11 Aligned_cols=64 Identities=9% Similarity=0.196 Sum_probs=44.1
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|..+|.+||+. ..+|+..+|+.+|+++=..- ..+++.+..++...-. -+.+.++|++|..++.
T Consensus 10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~-------n~Dg~vdF~EF~~li~ 79 (94)
T d1j55a_ 10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDA-------NGDAQVDFSEFIVFVA 79 (94)
T ss_dssp HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCS-------SSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC-------CCCCcCCHHHHHHHHH
Confidence 578899999964 36899999999998743321 1123456777766542 1357899999998875
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=89.52 E-value=0.37 Score=39.48 Aligned_cols=68 Identities=15% Similarity=0.274 Sum_probs=52.9
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHh--CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQ--GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+..++..+|+.|=.+ ...|+.++|+.+|..-. +. .++.+++++++..+-.. +.+.+++++|..+|.+
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~ls~~ev~~~~~~~D~d-------~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 38 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADKD-------GDGKIGIDEFETLVHE 108 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHCCC-------CcCcEeHHHHHHHHHh
Confidence 3457899999999544 68999999999997543 33 46888999999886422 3578999999999864
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.28 E-value=0.32 Score=35.72 Aligned_cols=62 Identities=13% Similarity=0.384 Sum_probs=49.0
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
.||..+|+.|=.+ ...|+.++|+.-|... +. ..+.+++..++..+... +.+.++++.|++.|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~l-g~-~~~~~e~~~l~~~~D~d-------~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID-------GDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHTTCTT-------CSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHcCCC-------CCCcEeHHHHHHHC
Confidence 5789999999654 5899999999998864 44 47888999998886532 24679999999865
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=89.18 E-value=0.49 Score=36.60 Aligned_cols=64 Identities=14% Similarity=0.324 Sum_probs=49.9
Q ss_pred chhHHHHHHHhhCC-C-CccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-G-THMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+++..|..|-.+ . ..|+..+|+.-|+. -|. ..+.++++++|..+-.. +.+.+++++|+.+|.
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~-lg~-~~t~~el~~~i~~~D~d-------~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQ-NPTPEELQEMIDEVDED-------GSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHH-TTC-CCCHHHHHHHHHTTCTT-------CCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHH-cCC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHH
Confidence 35788889999644 3 68999999999975 444 36899999999986422 246899999998875
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.17 E-value=0.41 Score=35.31 Aligned_cols=62 Identities=11% Similarity=0.272 Sum_probs=49.9
Q ss_pred hHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++.+|+.|=. +...|+.++|+..|+.- +. ..+.+++..++..+... +.+.+++++|..+|.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~~i~~~~~~~D~d-------~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SP-YFTQEDIVKFFEEIDVD-------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CT-TSCHHHHHHHHHHHCCS-------SSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHh-cc-ccchHHHHHHHHHhCCC-------CCCeEeHHHHHHHHH
Confidence 47889999954 46899999999999864 44 47899999999988522 246799999999885
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.55 E-value=0.64 Score=38.50 Aligned_cols=63 Identities=11% Similarity=0.283 Sum_probs=50.4
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
+.++..+|..|-.+ ...++.++|..+|.... ..++.+++..++..+... +.+.+++++|.++|
T Consensus 78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g--~~l~~~e~~~l~~~~D~d-------~dG~i~~~EF~~~m 141 (141)
T d2obha1 78 KEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRD-------GDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CCCCHHHHHHHHHHHCTT-------SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHHhC--CCCCHHHHHHHHHHHCCC-------CCCCEeHHHHHHhC
Confidence 45788899998765 58999999999998644 357899999999987532 34789999999876
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.47 E-value=0.29 Score=37.16 Aligned_cols=63 Identities=13% Similarity=0.289 Sum_probs=49.3
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|+..+|..|=.+ ...|+.++|+..|+.. +. ..+.+++.+++..+-.. +.+.+++++|+.+|.
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~t~~e~~~~~~~~D~~-------~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GL-SPSEAEVNDLMNEIDVD-------GNHQIEFSEFLALMS 73 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-TC-CCCHHHHHHHHHTTCCS-------SCCEEEHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEChHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHH
Confidence 4677789998544 6899999999999875 34 46888899999886522 346899999998774
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=88.21 E-value=0.55 Score=40.15 Aligned_cols=65 Identities=15% Similarity=0.322 Sum_probs=49.7
Q ss_pred chhHHHHHHHhh-CCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYA-EGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~-~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+.++..+|+.|= .+...|+.++|+.+|... +. ..+.+++..|+..+... +.+.+++++|.++|.+
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~-~~-~~~~~~~~~l~~~~D~d-------~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN-------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh-CC-CCCHHHHHHHHHHhCCC-------CCCcEEHHHHHHHHHc
Confidence 345677888884 346899999999999853 33 46788999999887522 3478999999999863
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=87.46 E-value=0.68 Score=37.64 Aligned_cols=69 Identities=14% Similarity=0.241 Sum_probs=53.7
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhC-CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQG-HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+..+++.+|+.|=.+ ...|+.++|+.+|+.... ....+.+++..|++.+-.. +.+.+++++|...|..
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d-------~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKD-------GDGKIGVEEFSTLVAE 108 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHHT
T ss_pred CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHHh
Confidence 3467888999999644 589999999999987542 2246788899999988532 3468999999998863
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=86.60 E-value=0.5 Score=39.74 Aligned_cols=66 Identities=17% Similarity=0.265 Sum_probs=51.5
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+.+|..+|+.|-.+ ...|+.++|+..|.. -++ ..+.+++..++.... -+.+.+++++|+++|+|
T Consensus 78 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~-~~~~~e~~~l~~~~~--------d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 78 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT-LGE-KMTEEEVEELMKGQE--------DSNGCINYEAFVKHIMS 144 (145)
T ss_pred chHHHHHHHHHHhhcCCCCEEcHHHHHHHHHH-hCC-CCCHHHHHHHHhhcC--------CCCCeEEHHHHHHHHhc
Confidence 3466799999999755 589999999999985 455 478889999986422 12457999999999985
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=85.44 E-value=0.26 Score=38.65 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=49.0
Q ss_pred hhHHHHHHHh-hCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKY-AEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~-~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..+ ..+...|+.++|+..|+... . ..+.+++++|+..+-.. +.+.++++.|+..|+
T Consensus 23 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg-~-~~s~~e~~~l~~~~D~d-------~~g~I~~~EFl~am~ 86 (87)
T d1s6ja_ 23 GGLKELFKMIDTDNSGTITFDELKDGLKRVG-S-ELMESEIKDLMDAADID-------KSGTIDYGEFIAATV 86 (87)
T ss_dssp TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTT-S-SCCHHHHHHHHHHHCTT-------CSSEECHHHHTTCCC
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcC-C-CCCHHHHHHHHHHcCCC-------CCCeEeHHHHHHHHc
Confidence 4688899999 45579999999999998753 3 36889999999987632 246799999986553
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.43 E-value=0.91 Score=39.43 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=52.2
Q ss_pred CCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhC---CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 22 AGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQG---HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 22 ~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
....+.++.+|.+++++...++..+|+..|+..=- ....+.+.++.+++.+-.. +.+.|++++|..++.
T Consensus 3 ~~~~~~~~~~F~~~~~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d-------~~G~I~f~EF~~~~~ 74 (172)
T d1juoa_ 3 GQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD-------MSGTMGFNEFKELWA 74 (172)
T ss_dssp TCCCCTTHHHHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTT-------CSSCEEHHHHHHHHH
T ss_pred cchHHHHHHHHHHhCCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCC-------CCCceehHHHHHHHH
Confidence 34456789999999987899999999999986421 1235678899999987532 246799999987653
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.95 E-value=1.2 Score=38.57 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=50.0
Q ss_pred hhHHHHHHHhhCCCCccCHHHHHHHHHHHh------CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEGGTHMTAEQLWQFLVEVQ------GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+++.+|.+++++...++..+|..+|...- .....+.+.|..++..+... +.+.++++.|..++.
T Consensus 4 ~~~r~~F~~~d~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d-------~~g~i~~~ef~~~~~ 74 (173)
T d1alva_ 4 RQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD-------TTGKLGFEEFKYLWN 74 (173)
T ss_dssp HHHHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccC-------CCCcccchhhhhhhh
Confidence 478999999997778999999999998642 12235678899999887632 246799999987653
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.74 E-value=0.72 Score=38.76 Aligned_cols=64 Identities=16% Similarity=0.333 Sum_probs=50.7
Q ss_pred CchhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
++.++..+|+.|-. +...|+.++|+..|..... .++.+.+..++..+. . +.+.++++.|.++|.
T Consensus 81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~~~~~~~~~~d-d-------~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE--KLTDAEVDDMLREVS-D-------GSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC--SCCHHHHHHHHHHHC-C-------SSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--cccHHHHHHHHHhcc-C-------CCCeEeHHHHHHHhC
Confidence 35678899999954 4689999999999987654 378889999998764 1 245799999998873
|
| >d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Dystrophin species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.57 E-value=0.85 Score=36.58 Aligned_cols=64 Identities=11% Similarity=0.055 Sum_probs=45.3
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCC---------CC--HHHHHHHHHHHhhhccccccccCCCcCHHHHHHH
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGG---------VS--IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHY 95 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~---------~~--~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~ 95 (602)
-.++||.++++....|+...|..||.+..+-+. .+ +..+++.++.- ..+..++.+.|+.+
T Consensus 5 KyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~---------~~~~~i~~~~FL~w 75 (97)
T d1eg3a2 5 KYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDW 75 (97)
T ss_dssp HHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHT---------TTCSCBCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhcc---------CCCCcccHHHHHHH
Confidence 368899999988899999999999998774321 11 22233333221 12457999999999
Q ss_pred hcCC
Q 007473 96 LFST 99 (602)
Q Consensus 96 L~S~ 99 (602)
|++.
T Consensus 76 l~~e 79 (97)
T d1eg3a2 76 MRLE 79 (97)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9974
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=84.19 E-value=1.2 Score=36.99 Aligned_cols=63 Identities=14% Similarity=0.309 Sum_probs=48.8
Q ss_pred hhHHHHHHHhh-CCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|+.+|..+- .+...||.++|..+|..... ..+...+..++..+... ..+.++++.|..++.
T Consensus 9 ~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~ 72 (146)
T d1exra_ 9 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQ--NPTEAELQDMINEVDAD-------GNGTIDFPEFLSLMA 72 (146)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC--CCCHHHHHHHHHHHCTT-------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCC-------CCCcccHHHHHHHHH
Confidence 57888899995 44689999999999987643 36778888888887522 246789999998875
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=82.73 E-value=0.74 Score=34.40 Aligned_cols=62 Identities=15% Similarity=0.337 Sum_probs=48.9
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
.|++.+|..|-.+ ...|+.++|+.-|... +. .++.+.+..++..+-.. +.+.++++.|+..|
T Consensus 8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~s~~~~~~~~~~~D~d-------~~g~I~f~eF~~~m 70 (73)
T d2pq3a1 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQ-NPTEAELQDMINEVDAD-------GNGTIDFPEFLTMM 70 (73)
T ss_dssp HHHHHHHHHTCTTSSSEEEGGGHHHHHHHT-TC-CCCHHHHHHHHHHHCTT-------CSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEeHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHH
Confidence 4677789998654 5899999999999864 44 47899999999987532 34679999999876
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=82.69 E-value=0.28 Score=41.99 Aligned_cols=66 Identities=11% Similarity=0.290 Sum_probs=50.9
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+..++..+|..|-.+ ..+|+.++|+..+...- ..++.+++.+|++.+-.. +.+.+++++|.++|.
T Consensus 88 ~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~--~~ls~~e~~~i~~~~D~d-------~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 88 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKN-------NDGRIDYDEFLEFMK 154 (156)
T ss_dssp CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC----CCCHHHHHHHHHHHCTT-------SSSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcC--CCCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHHc
Confidence 3456788999999765 58999999999986543 347889999999987522 246899999999984
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=81.04 E-value=1.7 Score=38.16 Aligned_cols=67 Identities=21% Similarity=0.270 Sum_probs=50.5
Q ss_pred CchhHHHHHHHhhCCCCccCHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQG------HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~------~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...+++.+|.+++++...|+.++|..+|...-. ....+.+.+..++..+-.. +.+.|++++|..++.
T Consensus 16 ~~~~~r~~F~~~d~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d-------~~G~I~~~EF~~~~~ 88 (186)
T d1df0a1 16 IGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDED-------GSGKLGLKEFYILWT 88 (186)
T ss_dssp SCHHHHHHHHHHHGGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCS-------SSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCC-------CCCcccHHHHHHHHH
Confidence 345689999999966789999999999986421 1245778899999987532 246799999987653
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=80.84 E-value=1.6 Score=38.19 Aligned_cols=69 Identities=13% Similarity=0.232 Sum_probs=52.7
Q ss_pred cCCCCchhHHHHHHHh-hCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 20 AEAGPPADVKEMFKKY-AEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 20 ~~~~~r~el~~if~~~-~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+....+++|..+|..+ ..+...|+.++|...|+... ...+.++++.++..+... ..+.+++..|..++.
T Consensus 12 ~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~--~~~s~~~~~~l~~~~d~d-------~~~~i~~~ef~~~~~ 81 (182)
T d1y1xa_ 12 RHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAG--VPFSLATTEKLLHMYDKN-------HSGEITFDEFKDLHH 81 (182)
T ss_dssp CSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTT--BCCCHHHHHHHHHHHCTT-------CSSSBCHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhc--ccCchhhhhhhhcccccc-------ccccccccccccccc
Confidence 3345567899999999 44568999999999997543 246888999999887532 245799999988764
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=80.56 E-value=0.87 Score=38.66 Aligned_cols=70 Identities=23% Similarity=0.314 Sum_probs=54.0
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
.+..+|...|+.|-.+ ..+|+.++|+.-|... +. .++.+++.+++..+.... -..+.++++.|.+.|++.
T Consensus 79 ~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~-g~-~ls~~e~~~l~~~~d~~~-----d~~G~I~y~eF~~~~~~~ 149 (152)
T d1wdcc_ 79 GTFADYMEAFKTFDREGQGFISGAELRHVLTAL-GE-RLSDEDVDEIIKLTDLQE-----DLEGNVKYEDFVKKVMAG 149 (152)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHTCCC-----CTTSEEEHHHHHHHHHHC
T ss_pred hHHHhhhhhhhccccccCccchHHHHHHHHHHc-CC-CCCHHHHHHHHHHhccCC-----CCCCEEEHHHHHHHHhcC
Confidence 4457899999999655 5899999999999764 44 579999999999875211 013579999999999863
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=80.25 E-value=1.7 Score=36.35 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=51.8
Q ss_pred chhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..+|...|+.+-. +...|+.++|+..|... +. .++.+++..++..+... ..+.+++..|.+.|+-
T Consensus 76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~-g~-~ls~~e~~~~~~~~d~d-------~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 76 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GG-RFTPEEIKNMWAAFPPD-------VAGNVDYKNICYVITH 141 (145)
T ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHhcc
Confidence 4578899999954 46899999999999864 44 47899999999987532 2457999999999974
|