Citrus Sinensis ID: 007552

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------60
MSRDLLEESNASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL
ccHHHHHHHcHHHHHHHHHHHcccccccccEEHHHHccccccccHHHHHHcccccEEEEccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHcHHcccEEEEEccHHHHHHHHHcccccccccEEEEEEccccccEEEEEEEEccEEEEEccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccccccEEEcccccccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
ccHHHHHHHHcccccccccEEEEcccccccEEEHHHHHccccccHHHHHHHcccccEEEccccccEEEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHHccccccccEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccEEEEEEEEHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHccccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
MSRDLLEESNASFFKCLFIcvdfsplkkkggwRLIEFVFARfedkevqrdmklapykivnrdgkpyiqvqirdgetkvfspEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGldkkggeknILVFdlgggtfdvsILTIDNGVFEVLstngdthlggedfDQRVMEYFIKLIKKkhgkdiskdKRAIGKLRREAERAKRALSSQHQVRVEIESLfdgidfseplTRARFEELNNDLFRKTMGPVKKAMedagleknqIDEIVLvggstripKVQQLLKDyfdgkepnkgvnpdeAVAYGAAVqggilsgeggdetkdillldvapltlgietvggvmtkliprntviptkksqvfttyqdqqtTVSIQVFEGERSLTKDCRLLgkfdlsgippaprgtpqiEVTFEVDangilnvkaedkgtgksekititndkgrlsQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVyqrsggapgagtessddddshdel
MSRDLLEESNASFFKCLFICVDFSPLKKKGGWRLIEFVFarfedkevqrdmklapykivnrdgkpyiqvqirdgetkvfsPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNgdthlggedfDQRVMEYFIKLikkkhgkdiskdkraiGKLRREAERAkralssqhqvrvEIESlfdgidfsePLTRARFEELNNDLFRKTMGPVKKAMedagleknqIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGgvmtkliprntviptkksqvfttyqdqqttvsiqvfegerSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDangilnvkaedkgtgksekititndkgrlsqeeIDRMVREAeefaeedkkvkekidarnslETYVYnmknqindkdkladKLESDEKDKIETAVKEAlewlddnqsAEKEDYEEKLKEVEAVCNPIITAVyqrsggapgagtessddddshdel
MSRDLLEESNASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFiklikkkhgkdiskdkRAIGklrreaerakralssQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTEssddddshdEL
**********ASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK********************************RVEIESLFDGIDFSEPLTRARFEELNNDLFRK*************LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG**********EAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA**GTPQIEVTFEVDANGILNV*******************************************************TYVY***************************************************EVEAVCNPIITAVYQ**********************
********SNASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKG*GKSEKITITNDKGRLSQEEIDRMVREAEEFAE*********DARNSLETYVYNMKN******************KIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPI****************************
********SNASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKL***************QVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREA***********EKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQ**********LKEVEAVCNPIITAVYQR*********************
****LLEES***FFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRS********************
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MSRDLLEESNASFFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDxxxxxxxxxxxxxxxxxxxxxLSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEExxxxxxxxxxxxxxxxxxxxxIDARNSLETYVYNxxxxxxxxxxxxxxxxxxxxxKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query599 2.2.26 [Sep-21-2011]
Q03685668 Luminal-binding protein 5 N/A no 0.933 0.836 0.941 0.0
Q03684667 Luminal-binding protein 4 N/A no 0.931 0.836 0.939 0.0
P49118666 Luminal-binding protein O N/A no 0.931 0.837 0.933 0.0
Q42434668 Luminal-binding protein O N/A no 0.933 0.836 0.910 0.0
Q39043668 Mediator of RNA polymeras yes no 0.933 0.836 0.907 0.0
Q9LKR3669 Mediator of RNA polymeras yes no 0.899 0.805 0.927 0.0
O24581663 Luminal-binding protein 3 N/A no 0.899 0.812 0.920 0.0
P24067663 Luminal-binding protein 2 N/A no 0.899 0.812 0.920 0.0
Q8H1B3675 Probable mediator of RNA no no 0.898 0.797 0.801 0.0
Q0VCX2655 78 kDa glucose-regulated yes no 0.919 0.841 0.701 0.0
>sp|Q03685|BIP5_TOBAC Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1 Back     alignment and function desciption
 Score = 1073 bits (2774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/560 (94%), Positives = 550/560 (98%), Gaps = 1/560 (0%)

Query: 41  RFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFL 100
           +F+DKEVQRD KL PY+IVN+DGKPYIQV+I+DGETKVFSPEEISAMILTKMKETAEA+L
Sbjct: 109 KFDDKEVQRDKKLVPYEIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYL 168

Query: 101 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 160
           GKKIKDAVVTVPAYFNDAQRQATKDAG+IAGLNVARIINEPTAAAIAYGLDKKGGEKNIL
Sbjct: 169 GKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 228

Query: 161 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKD 220
           VFDLGGGTFDVSILTIDNGVFEVL+TNGDTHLGGEDFDQR+MEYFIKLIKKKHGKDISKD
Sbjct: 229 VFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKD 288

Query: 221 KRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGP 280
            RA+GKLRREAERAKRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGP
Sbjct: 289 NRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGP 348

Query: 281 VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340
           VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ
Sbjct: 349 VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 408

Query: 341 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 400
           GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT
Sbjct: 409 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 468

Query: 401 TVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG 460
           TV+I VFEGERSLTKDCRLLGKFDL+GI PAPRGTPQIEVTFEVDANGILNVKAEDK +G
Sbjct: 469 TVTISVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASG 528

Query: 461 KSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK 520
           KSEKITITNDKGRLSQEEI+RMV+EAEEFAEEDKKVKE+IDARNSLETYVYNM+NQINDK
Sbjct: 529 KSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDK 588

Query: 521 DKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 580
           DKLADKLESDEK+KIETA KEALEWLDDNQSAEKEDY+EKLKEVEAVCNPIITAVYQRSG
Sbjct: 589 DKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSG 648

Query: 581 GAP-GAGTESSDDDDSHDEL 599
           GAP GA  ES++DDDSHDEL
Sbjct: 649 GAPGGASEESNEDDDSHDEL 668
Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.
Nicotiana tabacum (taxid: 4097)
>sp|Q03684|BIP4_TOBAC Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1 Back     alignment and function description
>sp|P49118|BIP_SOLLC Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function description
>sp|Q42434|BIP_SPIOL Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1 Back     alignment and function description
>sp|Q39043|MD37F_ARATH Mediator of RNA polymerase II transcription subunit 37f OS=Arabidopsis thaliana GN=MED37F PE=1 SV=2 Back     alignment and function description
>sp|Q9LKR3|MD37A_ARATH Mediator of RNA polymerase II transcription subunit 37a OS=Arabidopsis thaliana GN=MED37A PE=1 SV=1 Back     alignment and function description
>sp|O24581|BIP3_MAIZE Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1 Back     alignment and function description
>sp|P24067|BIP2_MAIZE Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3 Back     alignment and function description
>sp|Q8H1B3|MD37B_ARATH Probable mediator of RNA polymerase II transcription subunit 37b OS=Arabidopsis thaliana GN=MED37B PE=1 SV=1 Back     alignment and function description
>sp|Q0VCX2|GRP78_BOVIN 78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
211906506666 luminal binding protein [Gossypium hirsu 0.931 0.837 0.957 0.0
225426230667 PREDICTED: luminal-binding protein 5 [Vi 0.933 0.838 0.953 0.0
255555659664 heat shock protein, putative [Ricinus co 0.929 0.838 0.953 0.0
449452228665 PREDICTED: luminal-binding protein 5-lik 0.929 0.837 0.948 0.0
6911549665 heat shock protein 70 [Cucumis sativus] 0.929 0.837 0.946 0.0
729623668 RecName: Full=Luminal-binding protein 5; 0.933 0.836 0.941 0.0
224072248666 predicted protein [Populus trichocarpa] 0.933 0.839 0.939 0.0
729620667 RecName: Full=Luminal-binding protein 4; 0.931 0.836 0.939 0.0
359490716667 PREDICTED: luminal-binding protein 5-lik 0.933 0.838 0.932 0.0
217456978667 ER luminal-binding protein [Nicotiana be 0.931 0.836 0.933 0.0
>gi|211906506|gb|ACJ11746.1| luminal binding protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/559 (95%), Positives = 554/559 (99%), Gaps = 1/559 (0%)

Query: 41  RFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFL 100
           +FEDKEVQRDMKL PYKIVN+DGKPYIQV+I+DGETKVFSPEEISAM+LTKMKETAEAFL
Sbjct: 109 KFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMVLTKMKETAEAFL 168

Query: 101 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 160
           GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL
Sbjct: 169 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 228

Query: 161 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKD 220
           VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQR+MEYFIKLIKKKHGKDISKD
Sbjct: 229 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKD 288

Query: 221 KRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGP 280
            RA+GKLRREAERAKRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGP
Sbjct: 289 NRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGP 348

Query: 281 VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340
           VKKAMEDAGL+K+QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ
Sbjct: 349 VKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 408

Query: 341 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 400
           GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT
Sbjct: 409 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 468

Query: 401 TVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG 460
           TVSIQVFEGERSLTKDCRLLGKFDL+GIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG
Sbjct: 469 TVSIQVFEGERSLTKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG 528

Query: 461 KSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK 520
           KSEKITITNDKGRLSQEEI+RMVREAEEFAEEDKKVKE+IDARNSLETY+YNMKNQINDK
Sbjct: 529 KSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQINDK 588

Query: 521 DKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 580
           DKLADKLESDEK+K+ETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG
Sbjct: 589 DKLADKLESDEKEKVETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 648

Query: 581 GAPGAGTESSDDDDSHDEL 599
           GAPG G+ + +DDDSHDEL
Sbjct: 649 GAPGGGS-TEEDDDSHDEL 666

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426230|ref|XP_002263323.1| PREDICTED: luminal-binding protein 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255555659|ref|XP_002518865.1| heat shock protein, putative [Ricinus communis] gi|223541852|gb|EEF43398.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449452228|ref|XP_004143862.1| PREDICTED: luminal-binding protein 5-like [Cucumis sativus] gi|449524930|ref|XP_004169474.1| PREDICTED: luminal-binding protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|6911549|emb|CAB72128.1| heat shock protein 70 [Cucumis sativus] Back     alignment and taxonomy information
>gi|729623|sp|Q03685.1|BIP5_TOBAC RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor gi|19813|emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224072248|ref|XP_002303672.1| predicted protein [Populus trichocarpa] gi|222841104|gb|EEE78651.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|729620|sp|Q03684.1|BIP4_TOBAC RecName: Full=Luminal-binding protein 4; Short=BiP 4; AltName: Full=78 kDa glucose-regulated protein homolog 4; Short=GRP-78-4; Flags: Precursor gi|19811|emb|CAA42659.1| luminal binding protein (BiP) [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|359490716|ref|XP_002276268.2| PREDICTED: luminal-binding protein 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|217456978|gb|ACK55195.1| ER luminal-binding protein [Nicotiana benthamiana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
UNIPROTKB|B9RYP6664 RCOM_1312280 "Heat shock prote 0.913 0.823 0.904 5.9e-263
TAIR|locus:2182783669 BIP1 [Arabidopsis thaliana (ta 0.914 0.819 0.874 2e-255
TAIR|locus:2165715668 BIP2 [Arabidopsis thaliana (ta 0.914 0.820 0.868 5.2e-255
TAIR|locus:2035994675 BIP3 "binding protein 3" [Arab 0.901 0.8 0.757 6.2e-220
MGI|MGI:95835655 Hspa5 "heat shock protein 5" [ 0.908 0.830 0.670 4.3e-196
UNIPROTKB|Q90593652 HSPA5 "78 kDa glucose-regulate 0.908 0.834 0.669 9e-196
RGD|2843654 Hspa5 "heat shock protein 5" [ 0.908 0.831 0.669 1.5e-195
UNIPROTKB|G3I8R9654 I79_019946 "78 kDa glucose-reg 0.908 0.831 0.669 1.9e-195
UNIPROTKB|P07823654 HSPA5 "78 kDa glucose-regulate 0.908 0.831 0.669 1.9e-195
UNIPROTKB|F1PIC7654 HSPA5 "Uncharacterized protein 0.908 0.831 0.667 3.9e-195
UNIPROTKB|B9RYP6 RCOM_1312280 "Heat shock protein, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 2530 (895.7 bits), Expect = 5.9e-263, P = 5.9e-263
 Identities = 495/547 (90%), Positives = 513/547 (93%)

Query:    41 RFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFL 100
             +FEDKEVQRDMKL PYKIVN+DGKPYIQV+I+DGETKVFSPEEISAMILTKMKETAEA+L
Sbjct:   108 KFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYL 167

Query:   101 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 160
             GKKIKDAVVTVPAYFNDAQRQATKDAG+IAGLNVARIINEPTAAAIAYGLDK+GGEKNIL
Sbjct:   168 GKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKRGGEKNIL 227

Query:   161 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXX 220
             VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQR+MEYF               
Sbjct:   228 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKD 287

Query:   221 XRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGP 280
              RA+G               QHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGP
Sbjct:   288 NRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGP 347

Query:   281 VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340
             VKKAMEDAGL+KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ
Sbjct:   348 VKKAMEDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 407

Query:   341 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 400
             GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT
Sbjct:   408 GGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQT 467

Query:   401 TVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG 460
             TVSIQVFEGERSLTKDCRLLGKFDL+ IPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG
Sbjct:   468 TVSIQVFEGERSLTKDCRLLGKFDLTSIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTG 527

Query:   461 KSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK 520
             KSEKITITNDKGRLSQEEI+RMVREAEEFAEEDKKVKE+IDARNSLETY+YNMKNQI+DK
Sbjct:   528 KSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQISDK 587

Query:   521 DKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 580
             DKLADKLESDEK+KIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG
Sbjct:   588 DKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 647

Query:   581 GAPGAGT 587
             GAPG G+
Sbjct:   648 GAPGGGS 654
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2182783 BIP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165715 BIP2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035994 BIP3 "binding protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:95835 Hspa5 "heat shock protein 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q90593 HSPA5 "78 kDa glucose-regulated protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|2843 Hspa5 "heat shock protein 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3I8R9 I79_019946 "78 kDa glucose-regulated protein" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
UNIPROTKB|P07823 HSPA5 "78 kDa glucose-regulated protein" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms
UNIPROTKB|F1PIC7 HSPA5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q91883GRP78_XENLANo assigned EC number0.70290.89980.8191N/Ano
O24581BIP3_MAIZENo assigned EC number0.92020.89980.8129N/Ano
P29844HSP7C_DROMENo assigned EC number0.69710.92320.8429yesno
Q71U34HSP7C_SAGOENo assigned EC number0.65790.89310.8281N/Ano
Q9LKR3MD37A_ARATHNo assigned EC number0.92760.89980.8056yesno
P16474GRP78_YEASTNo assigned EC number0.64890.89810.7888yesno
Q5R4P0GRP78_PONABNo assigned EC number0.70520.91810.8409yesno
Q16956GRP78_APLCANo assigned EC number0.71400.89980.8080N/Ano
P07823GRP78_MESAUNo assigned EC number0.70340.91980.8425N/Ano
Q03684BIP4_TOBACNo assigned EC number0.93910.93150.8365N/Ano
Q03685BIP5_TOBACNo assigned EC number0.94100.93320.8368N/Ano
P59769GRP78_ASPAWNo assigned EC number0.65170.91810.8184N/Ano
Q9U639HSP7D_MANSENo assigned EC number0.65240.89310.8205N/Ano
Q8T869BIP2_DICDINo assigned EC number0.67020.92150.8389yesno
Q24895GRP78_ECHMUNo assigned EC number0.66050.89640.8274N/Ano
P24067BIP2_MAIZENo assigned EC number0.92020.89980.8129N/Ano
Q01233HSP70_NEUCRNo assigned EC number0.64490.89140.8266N/Ano
Q05866GRP78_PLAFONo assigned EC number0.65300.92150.8427N/Ano
Q99170GRP78_YARLINo assigned EC number0.64530.92820.8298yesno
P83616GRP78_ASPNGNo assigned EC number0.65170.91810.8184yesno
Q42434BIP_SPIOLNo assigned EC number0.91070.93320.8368N/Ano
P49118BIP_SOLLCNo assigned EC number0.93380.93150.8378N/Ano
Q24798GRP78_ECHGRNo assigned EC number0.65570.90810.8356N/Ano
P78695GRP78_NEUCRNo assigned EC number0.64820.91650.8305N/Ano
Q39043MD37F_ARATHNo assigned EC number0.90730.93320.8368yesno
P09189HSP7C_PETHYNo assigned EC number0.64660.90310.8310N/Ano
A2Q0Z1HSP7C_HORSENo assigned EC number0.65790.89310.8281yesno
P27420HSP7C_CAEELNo assigned EC number0.69130.91810.8320yesno
Q3S4T7GRP78_SPETRNo assigned EC number0.69800.91980.8425N/Ano
P83617GRP78_ASPKANo assigned EC number0.65170.91810.8184N/Ano
P06761GRP78_RATNo assigned EC number0.70700.91810.8409yesno
P19208HSP7C_CAEBRNo assigned EC number0.69720.91650.8305N/Ano
O59855HSP72_SCHPONo assigned EC number0.64120.89310.8268yesno
Q0VCX2GRP78_BOVINNo assigned EC number0.70160.91980.8412yesno
P20029GRP78_MOUSENo assigned EC number0.70880.91810.8396yesno
P11021GRP78_HUMANNo assigned EC number0.70520.91810.8409yesno
Q90593GRP78_CHICKNo assigned EC number0.70340.91980.8450yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00006687001
SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00032542001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (895 aa)
  •  • •0.819
GSVIVG00006855001
SubName- Full=Chromosome undetermined scaffold_178, whole genome shotgun sequence; (899 aa)
  •  • •0.818
GSVIVG00006252001
SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (392 aa)
     •  0.800
GSVIVG00033682001
SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)
• •   • 0.651
GSVIVG00015306001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)
• •   • 0.613
GSVIVG00027261001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (298 aa)
• • • • 0.572
GSVIVG00000640001
RecName- Full=DNA topoisomerase 2; EC=5.99.1.3; (661 aa)
  •   • 0.570
GSVIVG00004392001
SubName- Full=Chromosome undetermined scaffold_686, whole genome shotgun sequence; (425 aa)
• •   • 0.512
GSVIVG00033870001
SubName- Full=Chromosome undetermined scaffold_70, whole genome shotgun sequence; (133 aa)
  •     0.505
GSVIVG00013558001
SubName- Full=Chromosome undetermined scaffold_502, whole genome shotgun sequence; Flags- Fragm [...] (322 aa)
• •     0.504

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 0.0
pfam00012598 pfam00012, HSP70, Hsp70 protein 0.0
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 0.0
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 0.0
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 0.0
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 0.0
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 0.0
PRK13411653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 0.0
CHL00094621 CHL00094, dnaK, heat shock protein 70 0.0
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 0.0
PRK13410668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 0.0
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 0.0
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-177
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 1e-172
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 1e-171
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-147
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 1e-141
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-139
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 1e-125
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 1e-110
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 1e-102
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 3e-99
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 8e-98
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 5e-96
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 6e-92
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 3e-88
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 3e-75
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 2e-66
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 5e-66
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 3e-63
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 1e-58
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 1e-32
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 3e-14
cd10225320 cd10225, MreB_like, MreB and similar proteins 4e-14
PRK11678450 PRK11678, PRK11678, putative chaperone; Provisiona 4e-11
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 5e-09
PRK13928336 PRK13928, PRK13928, rod shape-determining protein 4e-08
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 5e-08
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 7e-08
PRK13930335 PRK13930, PRK13930, rod shape-determining protein 2e-07
COG4820277 COG4820, EutJ, Ethanolamine utilization protein, p 2e-07
PRK15080267 PRK15080, PRK15080, ethanolamine utilization prote 3e-07
cd10227312 cd10227, ParM_like, Plasmid segregation protein Pa 1e-06
TIGR02529239 TIGR02529, EutJ, ethanolamine utilization protein 2e-06
COG1077342 COG1077, MreB, Actin-like ATPase involved in cell 2e-06
COG0849418 COG0849, ftsA, Cell division ATPase FtsA [Cell div 4e-06
PRK13927334 PRK13927, PRK13927, rod shape-determining protein 5e-06
PRK13929335 PRK13929, PRK13929, rod-share determining protein 3e-05
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 7e-04
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 0.002
pfam01968285 pfam01968, Hydantoinase_A, Hydantoinase/oxoprolina 0.003
TIGR01174371 TIGR01174, ftsA, cell division protein FtsA 0.004
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information 
 Score =  849 bits (2196), Expect = 0.0
 Identities = 358/549 (65%), Positives = 443/549 (80%), Gaps = 5/549 (0%)

Query: 41  RFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAF 99
           +F+D  VQ DMK  P+K+    D KP I+V  + GE K F PEEIS+M+L KMKE AEA+
Sbjct: 77  KFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQ-GEKKTFHPEEISSMVLQKMKEIAEAY 135

Query: 100 LGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKN 158
           LGK++KDAVVTVPAYFND+QRQATKDAG IAGLNV RIINEPTAAAIAYGLDKKG GEKN
Sbjct: 136 LGKQVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGDGEKN 195

Query: 159 ILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH-GKDI 217
           +L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++E+ ++  K+K+ GKD+
Sbjct: 196 VLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDL 255

Query: 218 SKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKT 277
           S ++RA+ +LR + ERAKR LSS  Q  +EI+SLF+GID++  ++RARFEEL  D FR T
Sbjct: 256 SSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNT 315

Query: 278 MGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGA 337
           + PV+K ++DAG++K  + E+VLVGGSTRIPKVQ L+KD+F+GKEP K +NPDEAVAYGA
Sbjct: 316 LQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGA 375

Query: 338 AVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQD 397
           AVQ  IL+GE   + +D+LLLDV PL+LG+ET GGVMTKLI RNT IPTKKSQ+FTTY D
Sbjct: 376 AVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYAD 435

Query: 398 QQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDK 457
            Q  V IQVFEGER++TKD  LLGKF L GIPPAPRG PQIEVTF++DANGILNV AEDK
Sbjct: 436 NQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDK 495

Query: 458 GTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 517
            TGKS KITITNDKGRLS+ +IDRMV EAE++  ED+  +E+++A+N LE Y Y+MKN +
Sbjct: 496 STGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTL 555

Query: 518 NDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 577
            D +K+  KL   +K  IE A+ EALEWL+ NQ AEKE++E K KEVE+VCNPI+T +YQ
Sbjct: 556 QD-EKVKGKLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQ 614

Query: 578 RSGGAPGAG 586
            +GG    G
Sbjct: 615 AAGGGMPGG 623

Length = 653
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|227157 COG4820, EutJ, Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|237904 PRK15080, PRK15080, ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>gnl|CDD|212669 cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins Back     alignment and domain information
>gnl|CDD|213718 TIGR02529, EutJ, ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|223918 COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|237562 PRK13927, PRK13927, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|216816 pfam01968, Hydantoinase_A, Hydantoinase/oxoprolinase Back     alignment and domain information
>gnl|CDD|233300 TIGR01174, ftsA, cell division protein FtsA Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 599
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00009653 heat shock 70 kDa protein; Provisional 100.0
PRK13411653 molecular chaperone DnaK; Provisional 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
PRK13410668 molecular chaperone DnaK; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
CHL00094621 dnaK heat shock protein 70 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
KOG0103727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 99.97
PRK13930335 rod shape-determining protein MreB; Provisional 99.97
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.97
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 99.95
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.94
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.94
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.86
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.81
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.64
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.52
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.41
PRK13917344 plasmid segregation protein ParM; Provisional 99.34
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.29
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.2
PTZ00280414 Actin-related protein 3; Provisional 99.16
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.05
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.02
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 98.94
PTZ00281376 actin; Provisional 98.92
PTZ00004378 actin-2; Provisional 98.87
PTZ00452375 actin; Provisional 98.82
PTZ00466380 actin-like protein; Provisional 98.81
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 98.67
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.56
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 98.54
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.5
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.34
COG5277444 Actin and related proteins [Cytoskeleton] 98.07
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 97.93
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.63
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.59
PRK10719475 eutA reactivating factor for ethanolamine ammonia 97.59
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 97.56
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 97.39
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 97.36
KOG0676372 consensus Actin and related proteins [Cytoskeleton 97.33
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 97.32
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.23
PRK13317277 pantothenate kinase; Provisional 97.06
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.74
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 96.69
COG1069544 AraB Ribulose kinase [Energy production and conver 96.23
PLN02669556 xylulokinase 96.09
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 96.05
PRK15027484 xylulokinase; Provisional 96.03
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 95.83
PRK00047498 glpK glycerol kinase; Provisional 95.32
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.31
PRK04123548 ribulokinase; Provisional 95.19
TIGR01311493 glycerol_kin glycerol kinase. This model describes 95.17
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.16
PTZ00294504 glycerol kinase-like protein; Provisional 95.15
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.07
PRK10331470 L-fuculokinase; Provisional 95.0
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 94.83
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 94.81
PLN02295512 glycerol kinase 94.77
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 94.73
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 94.72
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 94.69
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 94.66
KOG2517516 consensus Ribulose kinase and related carbohydrate 94.49
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 94.34
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 94.23
PRK10640471 rhaB rhamnulokinase; Provisional 94.18
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 93.93
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 93.24
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 90.7
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 90.32
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 90.09
PRK10854513 exopolyphosphatase; Provisional 89.56
PRK09604332 UGMP family protein; Validated 89.52
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 89.33
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 88.73
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 88.36
PLN02666 1275 5-oxoprolinase 87.28
PF02543360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 87.25
PRK14878323 UGMP family protein; Provisional 86.89
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 84.81
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 84.75
COG0554499 GlpK Glycerol kinase [Energy production and conver 84.47
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 83.45
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 82.41
PF08735254 DUF1786: Putative pyruvate format-lyase activating 80.57
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 80.12
COG0145674 HyuA N-methylhydantoinase A/acetone carboxylase, b 80.11
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3e-126  Score=934.06  Aligned_cols=583  Identities=74%  Similarity=1.109  Sum_probs=566.8

Q ss_pred             ccccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeCCcee
Q 007552           13 FFKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETK   77 (599)
Q Consensus        13 ~~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~g~~~   77 (599)
                      =-|-||++|+|+++.|+.|.               ..||||||+|+|+.+|++++.|||++|+.+|+|+++|....|+.+
T Consensus        66 GNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K  145 (663)
T KOG0100|consen   66 GNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQKDIKFLPFKVVNKDGKPYIQVKVGGGETK  145 (663)
T ss_pred             CCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChhhhhhhhcCceEEEcCCCCccEEEEccCCccc
Confidence            34899999999999999874               689999999999999999999999999999999999998558899


Q ss_pred             EechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCCcc
Q 007552           78 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEK  157 (599)
Q Consensus        78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~  157 (599)
                      .|+||++++|+|.++++.|+.|+|.+++++|+||||||++.||+++++|..+|||+++++|+||+|||++|++++....+
T Consensus       146 ~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEk  225 (663)
T KOG0100|consen  146 VFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEK  225 (663)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccceeccceEEEeecCccHHHHHhcccccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998889


Q ss_pred             EEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Q 007552          158 NILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRA  237 (599)
Q Consensus       158 ~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~  237 (599)
                      ++||||+||||||+|++.+.+++|+|+++.||.++||++||+++++|+...++++++.|++.+.+++.+|+++||+||+.
T Consensus       226 nilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRa  305 (663)
T KOG0100|consen  226 NILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRA  305 (663)
T ss_pred             eEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhH
Q 007552          238 LSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY  317 (599)
Q Consensus       238 Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~  317 (599)
                      ||.+.++.+.|+++++|.|++-++||+.||++..+++.....+++++|+++++.+.+|+.|+||||++|||.||+.|+++
T Consensus       306 LSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~f  385 (663)
T KOG0100|consen  306 LSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDF  385 (663)
T ss_pred             hccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccC
Q 007552          318 FDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQD  397 (599)
Q Consensus       318 f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d  397 (599)
                      |+|++.++.+||++|||+|||.+|..+|+.  ....++++.|++|+++||++.+|.|..+||||+.||++++..|++..|
T Consensus       386 F~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t~divLLDv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~D  463 (663)
T KOG0100|consen  386 FNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQD  463 (663)
T ss_pred             hCCCCccCCCChHHHHHhhhhhhhcccccc--cCcCcEEEEeeccccceeeeecceeeccccCCcccCccccceeeeccc
Confidence            999999999999999999999999999998  558899999999999999999999999999999999999999999999


Q ss_pred             CceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHH
Q 007552          398 QQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQE  477 (599)
Q Consensus       398 ~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~  477 (599)
                      +|+++.|++|+|++....+|+.||+|.|.|+||+|+|.|+|+|+|.+|.||+|+|++.++.+|++.+++|+++.++|++|
T Consensus       464 nQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~E  543 (663)
T KOG0100|consen  464 NQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPE  543 (663)
T ss_pred             CCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 007552          478 EIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDY  557 (599)
Q Consensus       478 ~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~  557 (599)
                      +|++|++++++|.+.|+..+++.++||+||+|.|.+++.+.+.+++...+++++++.+..+++++.+||++|.+++.++|
T Consensus       544 dIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~  623 (663)
T KOG0100|consen  544 DIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEF  623 (663)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHH
Confidence            99999999999999999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCC
Q 007552          558 EEKLKEVEAVCNPIITAVYQRSGGAPGAGTESSDDDDSHDEL  599 (599)
Q Consensus       558 ~~kl~~L~~~~~~i~~r~~e~~~~~~~~~~~~~~~~~~~~~~  599 (599)
                      .++..+|..+++||..++++.+||+|+..  ++.|++.||||
T Consensus       624 ~ek~kele~vv~PiisklY~~ag~~~~~~--~~ed~~e~del  663 (663)
T KOG0100|consen  624 KEKKKELEAVVQPIISKLYGGAGGAPEPA--GEEDTDEKDEL  663 (663)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCC--CCccchhhccC
Confidence            99999999999999999999777766544  56677788886

>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1 Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 1e-179
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 1e-178
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 1e-173
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 1e-133
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 1e-129
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 1e-129
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-121
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 1e-121
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-111
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 1e-110
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-108
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-108
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-108
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 1e-108
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-108
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-108
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-108
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-108
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 1e-108
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 1e-108
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 1e-108
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 1e-108
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 1e-108
3cqx_A386 Chaperone Complex Length = 386 1e-107
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 1e-107
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-107
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 1e-106
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 1e-106
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-106
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-106
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-105
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-105
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-104
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-104
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-104
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-104
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-104
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 1e-104
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-104
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 1e-104
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-104
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 1e-102
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 1e-100
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 5e-98
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 3e-74
1ckr_A159 High Resolution Solution Structure Of The Heat Shoc 2e-59
3h0x_A152 Crystal Structure Of Peptide-Binding Domain Of Kar2 3e-58
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 3e-56
3dob_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-55
2op6_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-54
1dky_A219 The Substrate Binding Domain Of Dnak In Complex Wit 5e-51
3dpo_A219 Crystal Structure Of The Substrate Binding Domain O 1e-50
1dkx_A219 The Substrate Binding Domain Of Dnak In Complex Wit 2e-50
1bpr_A191 Nmr Structure Of The Substrate Binding Domain Of Dn 1e-48
3n8e_A182 Substrate Binding Domain Of The Human Heat Shock 70 1e-47
3dqg_A151 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 2e-46
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 2e-43
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 7e-42
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 4e-37
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 5e-37
1dg4_A115 Nmr Structure Of The Substrate Binding Domain Of Dn 8e-36
1u00_A227 Hsca Substrate Binding Domain Complexed With The Is 3e-35
1q5l_A135 Nmr Structure Of The Substrate Binding Domain Of Dn 7e-35
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 8e-26
2p32_A120 Crystal Structure Of The C-Terminal 10 Kda Subdomai 4e-13
1ud0_A113 Crystal Structure Of The C-Terminal 10-Kda Subdomai 3e-12
3lof_A113 C-Terminal Domain Of Human Heat Shock 70kda Protein 8e-12
2lmg_A75 Solution Structure Of The C-Terminal Domain (537-61 5e-11
1jcf_A344 Mreb From Thermotoga Maritima, Trigonal Length = 34 3e-07
1jce_A344 Mreb From Thermotoga Maritima Length = 344 2e-06
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 305/478 (63%), Positives = 375/478 (78%), Gaps = 2/478 (0%)
Query: 41  RFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFL 100
           RF+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+L
Sbjct: 77  RFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYL 135
Query: 101 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNI 159
           GK + +AVVTVPAYFND+QRQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+
Sbjct: 136 GKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNV 195
Query: 160 LVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXX 219
           L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +F              
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISE 255
Query: 220 XXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMG 279
             RA+                  Q  +EI+SL++GIDF   +TRARFEELN DLFR T+ 
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 280 PVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAV 339
           PV+KA+ DA L+K+QI +IVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAV
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 340 QGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQ 399
           Q  ILSG+  +  +D+LLLDV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 400 TTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGT 459
             V IQV+EGER++TKD  LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK T
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495
Query: 460 GKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 517
           GK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  +
Sbjct: 496 GKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 Back     alignment and structure
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 Back     alignment and structure
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 Back     alignment and structure
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 Back     alignment and structure
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 Back     alignment and structure
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 Back     alignment and structure
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 Back     alignment and structure
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 Back     alignment and structure
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 Back     alignment and structure
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 Back     alignment and structure
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From C. Elegans Hsp70 Length = 120 Back     alignment and structure
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of Hsc70 Length = 113 Back     alignment and structure
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b. Length = 113 Back     alignment and structure
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of Human Heat Shock Protein 70 Length = 75 Back     alignment and structure
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal Length = 344 Back     alignment and structure
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima Length = 344 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 0.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 0.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 0.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 0.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 0.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 0.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 1e-161
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 1e-106
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 1e-106
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 1e-105
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 4e-96
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 3e-93
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 8e-93
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 9e-81
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 7e-71
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 8e-39
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 7e-35
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 7e-32
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 1e-29
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 2e-25
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 9e-22
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 4e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
3js6_A355 Uncharacterized PARM protein; partition, segregati 1e-11
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 4e-08
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 2e-07
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 5e-06
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 4e-04
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 7e-04
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score =  984 bits (2546), Expect = 0.0
 Identities = 324/478 (67%), Positives = 396/478 (82%), Gaps = 2/478 (0%)

Query: 41  RFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFL 100
           RF+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEE+S+M+LTKMKE AEA+L
Sbjct: 77  RFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK-GETKSFYPEEVSSMVLTKMKEIAEAYL 135

Query: 101 GKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNI 159
           GK + +AVVTVPAYFND+QRQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+
Sbjct: 136 GKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNV 195

Query: 160 LVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISK 219
           L+FDLGGGTFDVSILTI  G+FEV ST GDTHLGGEDFD R++ +FI   K+KH KDIS+
Sbjct: 196 LIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISE 255

Query: 220 DKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMG 279
           +KRA+ +LR   ERAKR LSS  Q  +EI+SL++GIDF   +TRARFEELN DLFR T+ 
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315

Query: 280 PVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAV 339
           PV+KA+ DA L+K+QI +IVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAV
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375

Query: 340 QGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQ 399
           Q  ILSG+  +  +D+LLLDV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435

Query: 400 TTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGT 459
             V IQV+EGER++TKD  LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK T
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495

Query: 460 GKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 517
           GK  KITITNDKGRLS+E+I+RMV+EAE++  ED+K ++K+ ++NSLE+Y +NMK  +
Sbjct: 496 GKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355 Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Length = 344 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Length = 484 Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Length = 419 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 100.0
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 99.97
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.96
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.96
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.96
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.94
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.92
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.91
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.89
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.87
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.85
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.85
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.84
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.76
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.59
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.58
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.57
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 99.43
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.43
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 99.24
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.2
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 99.17
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.12
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.09
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.03
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 98.76
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.19
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 98.09
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 97.22
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 96.86
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.09
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.06
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 95.98
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 95.86
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 95.84
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.78
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 95.74
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 95.31
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 95.24
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 95.23
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 95.17
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 95.08
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 95.07
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 95.06
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 94.97
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 94.9
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 94.78
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 94.68
2w40_A503 Glycerol kinase, putative; closed conformation, ma 94.5
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 94.05
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 93.95
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 92.53
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 92.11
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 91.91
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 91.65
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 91.3
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 90.62
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 88.6
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 88.45
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 88.0
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 87.72
2ap1_A327 Putative regulator protein; zinc binding protein, 87.0
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 86.22
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 84.48
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 84.36
1z6r_A406 MLC protein; transcriptional repressor, ROK family 83.75
3ven_A576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 81.84
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 81.46
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
Probab=100.00  E-value=2.9e-93  Score=795.91  Aligned_cols=551  Identities=50%  Similarity=0.802  Sum_probs=518.7

Q ss_pred             hhcccccCceEEecCCC-cccccc---------------cchhhccCCCCChHHHHhhccCCcEEEe-cCCceEEEEEEe
Q 007552           10 NASFFKCLFICVDFSPL-KKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIR   72 (599)
Q Consensus        10 ~~~~~r~~p~~v~~~~~-~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~-~~g~~~~~v~~~   72 (599)
                      |..-.|.||++|+|.+. .+..|+               ++|||||++|+|+.++.+.+.|||+++. .+|.+.+.+   
T Consensus        29 n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~---  105 (605)
T 4b9q_A           29 NAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV---  105 (605)
T ss_dssp             CTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEE---
T ss_pred             CCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEE---
Confidence            55667999999999754 455543               7999999999999999999999999996 677766654   


Q ss_pred             CCceeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhcccc
Q 007552           73 DGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDK  152 (599)
Q Consensus        73 ~g~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~  152 (599)
                      +|  +.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.|||+++++++||+|||++|+...
T Consensus       106 ~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~  183 (605)
T 4b9q_A          106 KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK  183 (605)
T ss_dssp             TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTS
T ss_pred             CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhc
Confidence            56  6899999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCccEEEEEEcCCCEEEEEEEEEeC----CeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Q 007552          153 KGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLR  228 (599)
Q Consensus       153 ~~~~~~vlVvD~Gggt~dvsv~~~~~----~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~  228 (599)
                      ...+.+++|||+||||||++++++.+    +.++++++.++.++||.+||..|++|+.++|+.+++.++..+++++.+|+
T Consensus       184 ~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~  263 (605)
T 4b9q_A          184 GTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLK  263 (605)
T ss_dssp             CCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHH
T ss_pred             cCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHH
Confidence            66678999999999999999999988    89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcceEEEEecccCC----ccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCC
Q 007552          229 REAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGS  304 (599)
Q Consensus       229 ~~~e~~K~~Ls~~~~~~i~i~~l~~~----~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~  304 (599)
                      .+||++|+.||....+.+.++.+..+    .++.++|||++|++++.|+++++..+|+++|+.+++...+|+.|+||||+
T Consensus       264 ~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~  343 (605)
T 4b9q_A          264 EAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQ  343 (605)
T ss_dssp             HHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGG
T ss_pred             HHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCc
Confidence            99999999999999998888766543    67889999999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCC
Q 007552          305 TRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVI  384 (599)
Q Consensus       305 srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~i  384 (599)
                      ||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++.    .+++.+.|++|++||+++.+|.|.++||+|++|
T Consensus       344 sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~i  418 (605)
T 4b9q_A          344 TRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTI  418 (605)
T ss_dssp             GGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBS
T ss_pred             cCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcC
Confidence            99999999999999 7888999999999999999999999987    568999999999999999999999999999999


Q ss_pred             CCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeE
Q 007552          385 PTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEK  464 (599)
Q Consensus       385 P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~  464 (599)
                      |++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.|.|.++|+|+|++|.||+|+|++.+..||+..+
T Consensus       419 P~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~  498 (605)
T 4b9q_A          419 PTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQK  498 (605)
T ss_dssp             SEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEEC
T ss_pred             CcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHH
Q 007552          465 ITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALE  544 (599)
Q Consensus       465 ~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~  544 (599)
                      ++|++. ..||++++++++++++++..+|+..+++.+++|+||+|+|++++.|++   +.+++++++++++...++++++
T Consensus       499 i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  574 (605)
T 4b9q_A          499 ITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALET  574 (605)
T ss_dssp             CEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHH
T ss_pred             EEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHH
Confidence            999887 689999999999999999999999999999999999999999999975   7788999999999999999999


Q ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 007552          545 WLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ  577 (599)
Q Consensus       545 WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e  577 (599)
                      ||+.+   +.++|++++++|++.+.|+..++++
T Consensus       575 ~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~  604 (605)
T 4b9q_A          575 ALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ  604 (605)
T ss_dssp             HHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred             HHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99987   6899999999999999999999875
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 599
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 7e-83
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 1e-79
d1yuwa1159 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus 3e-71
d1dkza2118 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI 1e-54
d1u00a2115 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 1e-47
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 7e-45
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 3e-43
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 1e-31
d1ud0a_84 a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 9e-31
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 4e-26
d1dkza197 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 6e-23
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 1e-20
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 1e-18
d1u00a1112 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) 3e-18
d1e4ft2191 c.55.1.1 (T:200-390) Cell division protein FtsA {T 0.001
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  256 bits (654), Expect = 7e-83
 Identities = 130/192 (67%), Positives = 161/192 (83%)

Query: 154 GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 213
           G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct: 2   GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61

Query: 214 GKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDL 273
            KDIS++KRA+ +LR   ERAKR LSS  Q  +EI+SL++GIDF   +TRARFEELN DL
Sbjct: 62  KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121

Query: 274 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAV 333
           FR T+ PV+KA+ DA L+K+QI +IVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181

Query: 334 AYGAAVQGGILS 345
           AYGAAVQ  ILS
Sbjct: 182 AYGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 112 Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Length = 191 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.97
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 99.93
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 99.92
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.9
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.88
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.83
d1ud0a_84 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.64
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.48
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.46
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.41
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.23
d1dkza197 DnaK {Escherichia coli [TaxId: 562]} 99.02
d1u00a1112 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.01
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.98
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.94
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.72
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.69
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 97.68
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.62
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.67
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 95.37
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 94.7
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.02
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 86.9
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 83.39
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 81.28
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 80.99
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-38  Score=301.95  Aligned_cols=190  Identities=68%  Similarity=1.074  Sum_probs=183.7

Q ss_pred             ccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Q 007552          156 EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAK  235 (599)
Q Consensus       156 ~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K  235 (599)
                      +++||||||||||||+|++++.++.++++++.++..+||.+||++|++|+.++|.++++.++..+++.+.+|+.+||++|
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K   83 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK   83 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHH
Q 007552          236 RALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLK  315 (599)
Q Consensus       236 ~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~  315 (599)
                      +.||.+.++.+.++.+..+.++.++|||++|+++++|+++++.++++++|.++++.+.+|+.|+|+||+||+|+|++.|+
T Consensus        84 ~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i~  163 (193)
T d1bupa2          84 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ  163 (193)
T ss_dssp             HHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred             hccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHH
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHcCCCCCCCCCCCchhhhchHHHhhhhhc
Q 007552          316 DYFDGKEPNKGVNPDEAVAYGAAVQGGILS  345 (599)
Q Consensus       316 ~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls  345 (599)
                      ++|++.++..+.||++|||+|||++|+.+|
T Consensus       164 ~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         164 DFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            999888888899999999999999999875
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure