Citrus Sinensis ID: 007582
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 597 | 2.2.26 [Sep-21-2011] | |||||||
| Q93VV5 | 591 | Probable peptide/nitrate | yes | no | 0.884 | 0.893 | 0.426 | 1e-120 | |
| Q8VYE4 | 567 | Probable peptide/nitrate | no | no | 0.867 | 0.913 | 0.413 | 1e-111 | |
| Q56XQ6 | 601 | Probable peptide/nitrate | no | no | 0.881 | 0.875 | 0.412 | 1e-109 | |
| Q8H157 | 585 | Nitrate transporter 1.2 O | no | no | 0.876 | 0.894 | 0.390 | 1e-109 | |
| Q9FM20 | 589 | Probable peptide/nitrate | no | no | 0.865 | 0.877 | 0.360 | 6e-98 | |
| Q9LYR6 | 624 | Probable peptide/nitrate | no | no | 0.919 | 0.879 | 0.368 | 6e-98 | |
| Q9LFB8 | 570 | Peptide transporter PTR5 | no | no | 0.891 | 0.933 | 0.350 | 6e-97 | |
| Q9M390 | 570 | Peptide transporter PTR1 | no | no | 0.884 | 0.926 | 0.340 | 2e-94 | |
| P46032 | 585 | Peptide transporter PTR2 | no | no | 0.886 | 0.904 | 0.332 | 2e-91 | |
| Q9LSE8 | 521 | Putative peptide/nitrate | no | no | 0.847 | 0.971 | 0.357 | 3e-89 |
| >sp|Q93VV5|PTR16_ARATH Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/544 (42%), Positives = 343/544 (63%), Gaps = 16/544 (2%)
Query: 4 KVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGS 63
+ N + GG RA FV A E MG A G +++ Y NEMHF L+ A+N +TNF G+
Sbjct: 35 RPSNPNKHGGMRAALFVLGLQAFEIMGIAAVGNNLITYVINEMHFPLSKAANIVTNFVGT 94
Query: 64 TFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCG---KSSC-- 118
F+ L+GG++SD FL F T +IFG +E+ ++L++QA+ L PP C +C
Sbjct: 95 IFIFALLGGYLSDAFLGSFWTIIIFGFVELSGFILLSVQAHLPQLKPPKCNPLIDQTCEE 154
Query: 119 LKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVA 178
KG A F+ +LYL + G G + + A GA QF ++ PK +K L+SYFN A ++
Sbjct: 155 AKGFKAMIFFMALYLVALGSGCVKPNMIAHGADQFSQSHPKQSKRLSSYFNAAYFAFSMG 214
Query: 179 AVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLV 238
+I +T +V+V T +GF VS+ A +G+I+L +G +R ++P S +A V+V
Sbjct: 215 ELIALTLLVWVQTHSGMDIGFGVSAAAMTMGIISLVSGTMYFRNKRPRRSIFTPIAHVIV 274
Query: 239 VAIKNRKLSLPDNPEELYE----INEKERASTWERIPHANQFRCLDKAAIMPKDSAVA-A 293
AI RKL+ P +P L+ N+ +ST +PH +FR LDKA I +D+ +
Sbjct: 275 AAILKRKLASPSDPRMLHGDHHVANDVVPSST---LPHTPRFRFLDKACIKIQDTNTKES 331
Query: 294 PWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHL-GSIKVPTS 352
PWR+CTVTQVE+VK L ++PI ASTI+ NT LAQLQTFS+ QG++M+ L S +P +
Sbjct: 332 PWRLCTVTQVEQVKTLISLVPIFASTIVFNTILAQLQTFSVQQGSSMNTRLSNSFHIPPA 391
Query: 353 SIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEV 412
S+ IP + + L+PLY+ F VPFARK+TGH SGI L R+GIGL LS SM A ++E
Sbjct: 392 SLQAIPYIMLIFLVPLYDSFLVPFARKLTGHNSGIPPLTRIGIGLFLSTFSMVSAAMLEK 451
Query: 413 IRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLS 472
RR++ + + +S+FW++ Q+ IFGI++MFT +GL+EFFYK++ GM++ + TY S
Sbjct: 452 KRRDS-SVLDGRILSIFWITPQFLIFGISEMFTAVGLIEFFYKQSAKGMESFLMALTYCS 510
Query: 473 LSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLY 532
SFG++ SS V ++N +T SK GWL D+NK+ ++LFYW LA++S+LN + YL+
Sbjct: 511 YSFGFYFSSVLVSVVNKITSTSVDSK-GWLGENDLNKDRLDLFYWLLAVLSLLNFLSYLF 569
Query: 533 AAAW 536
+ W
Sbjct: 570 WSRW 573
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VYE4|PTR12_ARATH Probable peptide/nitrate transporter At1g27040 OS=Arabidopsis thaliana GN=At1g27040 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/546 (41%), Positives = 334/546 (61%), Gaps = 28/546 (5%)
Query: 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCL 69
+ GG A +FV LEN+ F+AN ++VLY KN MH LA +S+ +T F + FLL L
Sbjct: 27 RHGGMLAASFVLAVEILENLAFLANASNLVLYLKNFMHMSLARSSSEVTTFMATAFLLAL 86
Query: 70 VGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLK-----GAIA 124
+GGF++D F S F LI ++E L L++LTIQA +L PP C S+ L+ G+ A
Sbjct: 87 LGGFLADAFFSTFVIFLISASIEFLGLILLTIQARRPSLMPPPCKSSAALRCEVVGGSKA 146
Query: 125 AYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184
A+ + LYL S G GG +G+LP+ GA QFDE PKG K +++FN+Y+ + A++ VT
Sbjct: 147 AFLFVGLYLVSLGIGGIKGSLPSHGAEQFDEGTPKGRKQRSTFFNYYVFCLSCGALVAVT 206
Query: 185 GIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNR 244
+V++ K W GF VS+++ F+ ++ G Y+ + P SPL + +VL+ A
Sbjct: 207 FVVWIEDNKGWEWGFGVSTISIFLSILVFLLGSRFYKNKIPRGSPLTTIFKVLLAA---S 263
Query: 245 KLSLPDNPEELYEINEKERASTWERIPH---ANQFRCLDKAAIMPKDSAVAAPWRVCTVT 301
+S + + + ++ E+ P N CL+KA I K + W CTV
Sbjct: 264 IVSCSSKTSSNHFTSREVQSEHEEKTPSQSLTNSLTCLNKA-IEGKTHHI---WLECTVQ 319
Query: 302 QVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLF 361
QVE+VKI+ +M+PI TI++N CLAQL T+S+ Q A M+ + + VP++S+PV P++F
Sbjct: 320 QVEDVKIVLKMLPIFGCTIMLNCCLAQLSTYSVHQAATMNRKIVNFNVPSASLPVFPVVF 379
Query: 362 MSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFN-- 419
M IL P Y+ +PFARK+T GIT LQR+G+GLVLS V+M VA LVE+ R+
Sbjct: 380 MLILAPTYDHLIIPFARKVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKRKQVAREA 439
Query: 420 ------ETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSL 473
ET P I+ W++ QY G AD+FT GLLEFF+ EAP+ M++LA+S ++ SL
Sbjct: 440 GLLDSEETLP--ITFLWIALQYLFLGSADLFTLAGLLEFFFTEAPSSMRSLATSLSWASL 497
Query: 474 SFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYA 533
+ GY+LSS V I+N VTK + + WL G+ +N+N ++LFYW + ++SV+N + YL+
Sbjct: 498 ALGYYLSSVMVPIVNRVTK--SAGQSPWL-GEKLNRNRLDLFYWLMCVLSVVNFLHYLFW 554
Query: 534 AAWYKY 539
A YKY
Sbjct: 555 AKRYKY 560
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q56XQ6|PTR15_ARATH Probable peptide/nitrate transporter At1g33440 OS=Arabidopsis thaliana GN=At1g33440 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 332/540 (61%), Gaps = 14/540 (2%)
Query: 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCL 69
+ GG RA FV F A E M A G +++ Y NEMHF L+ ++N +TNF G+ FLL L
Sbjct: 38 KHGGTRAALFVLGFQAFEMMAIAAVGNNLITYVFNEMHFPLSKSANLVTNFIGTVFLLSL 97
Query: 70 VGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSS----CLK--GAI 123
+GGF+SD++L F T L+FG +E+ ++L++QA+ L PP+C S C++ G
Sbjct: 98 LGGFLSDSYLGSFRTMLVFGVIEISGFILLSVQAHLPELRPPECNMKSTTIHCVEANGYK 157
Query: 124 AAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183
AA Y +L L + G G + + + GA QF D + L+S+FN A ++ +I +
Sbjct: 158 AATLYTALCLVALGSGCLKPNIISHGANQFQRKD---LRKLSSFFNAAYFAFSMGQLIAL 214
Query: 184 TGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243
T +V+V T +GF VS+ G+I+L AG YR + P S +AQV V AI
Sbjct: 215 TLLVWVQTHSGMDVGFGVSAAVMAAGMISLVAGTSFYRNKPPSGSIFTPIAQVFVAAITK 274
Query: 244 RKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQV 303
RK P NP +++ + + H+N+FR LDKA I + A+ +PWR+CT+ QV
Sbjct: 275 RKQICPSNPNMVHQ--PSTDLVRVKPLLHSNKFRFLDKACIKTQGKAMESPWRLCTIEQV 332
Query: 304 EEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHL-GSIKVPTSSIPVIPLLFM 362
+VKIL ++PI A TI+ NT LAQLQTFS+ QG++M+ H+ + ++P +S+ IP + +
Sbjct: 333 HQVKILLSVIPIFACTIIFNTILAQLQTFSVQQGSSMNTHITKTFQIPPASLQAIPYIIL 392
Query: 363 SILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETP 422
+PLYE FFVP ARK+TG+ SGI+ LQR+G GL L+ SM A LVE RR +F E
Sbjct: 393 IFFVPLYETFFVPLARKLTGNDSGISPLQRIGTGLFLATFSMVAAALVEKKRRESFLEQ- 451
Query: 423 PKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSA 482
+S+FW++ Q+ IFG+++MFT +GL+EFFYK++ M++ ++ TY S SFG++LSS
Sbjct: 452 NVMLSIFWIAPQFLIFGLSEMFTAVGLVEFFYKQSSQSMQSFLTAMTYCSYSFGFYLSSV 511
Query: 483 FVDIINAVTKRI-TPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKP 541
V +N VT + +K+GWL D+NK+ ++ FYW LA +S +N YL+ + WY P
Sbjct: 512 LVSTVNRVTSSNGSGTKEGWLGDNDLNKDRLDHFYWLLASLSFINFFNYLFWSRWYSCDP 571
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H157|PTR19_ARATH Nitrate transporter 1.2 OS=Arabidopsis thaliana GN=NRT1.2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 336/563 (59%), Gaps = 40/563 (7%)
Query: 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCL 69
+ GG A +FV V LEN+ ++AN ++VLY + MH + ++N +TNF G+ FLL L
Sbjct: 25 RHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHMSPSKSANDVTNFMGTAFLLAL 84
Query: 70 VGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSC--LKGAIAAYF 127
+GGF+SD F S F LI ++E L L++LTIQA + +L PP C +C + G+ AA
Sbjct: 85 LGGFLSDAFFSTFQIFLISASIEFLGLIILTIQARTPSLMPPSCDSPTCEEVSGSKAAML 144
Query: 128 YGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIV 187
+ LYL + G GG +G+L + GA QFDE+ PKG K +++FN+++ A++ VT +V
Sbjct: 145 FVGLYLVALGVGGIKGSLASHGAEQFDESTPKGRKQRSTFFNYFVFCLACGALVAVTFVV 204
Query: 188 YVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI------ 241
++ K W GF VS++A F+ ++ +G YR + P SPL + +VL+ A
Sbjct: 205 WLEDNKGWEWGFGVSTIAIFVSILIFLSGSRFYRNKIPCGSPLTTILKVLLAASVKCCSS 264
Query: 242 ---KNRKLSLPDNP---------EELYEINEKERASTWERIPH----ANQFRCLDKAAIM 285
N S+ +P +E+ E E+ E +P N + L+ AA
Sbjct: 265 GSSSNAVASMSVSPSNHCVSKGKKEVESQGELEKPRQEEALPPRAQLTNSLKVLNGAA-- 322
Query: 286 PKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG 345
D CTV QVE+VKI+ +M+PI A TI++N CLAQL TFS+ Q A+M+ +G
Sbjct: 323 --DEKPVHRLLECTVQQVEDVKIVLKMLPIFACTIMLNCCLAQLSTFSVQQAASMNTKIG 380
Query: 346 SIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMT 405
S+K+P +S+P+ P++F+ IL P+Y+ +PFARK T +G+T LQR+G+GLVLS ++M
Sbjct: 381 SLKIPPASLPIFPVVFIMILAPIYDHLIIPFARKATKTETGVTHLQRIGVGLVLSILAMA 440
Query: 406 VAGLVEVIRRNAF--------NETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEA 457
VA LVE+ R+ ET P ++ W++ QY G AD+FT GLLE+F+ EA
Sbjct: 441 VAALVEIKRKGVAKDSGLLDSKETLP--VTFLWIALQYLFLGSADLFTLAGLLEYFFTEA 498
Query: 458 PAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYW 517
P+ M++LA+S ++ SL+ GY+LSS V I+N++T + WL GK IN+ ++ FYW
Sbjct: 499 PSSMRSLATSLSWASLAMGYYLSSVIVSIVNSITG--SSGNTPWLRGKSINRYKLDYFYW 556
Query: 518 FLAIVSVLNLVLYLYAAAWYKYK 540
+ ++S N + YL+ A YKY+
Sbjct: 557 LMCVLSAANFLHYLFWAMRYKYR 579
|
Low-affinity proton-dependent nitrate transporter. Involved in constitutive nitrate uptake. Not involved in histidine or dipeptides transport. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FM20|PTR54_ARATH Probable peptide/nitrate transporter At5g62730 OS=Arabidopsis thaliana GN=At5g62730 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 310/544 (56%), Gaps = 27/544 (4%)
Query: 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCL 69
+ GG A +FV V LEN+ F+AN ++VLY +M F +GA+N +T F G+ F L L
Sbjct: 56 RHGGMLAASFVLVVEVLENLAFLANASNLVLYLSTKMGFSPSGAANAVTAFMGTAFFLAL 115
Query: 70 VGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYG 129
+GGF++D F + F L+ +E L L++LT+QA+ + P + +
Sbjct: 116 LGGFLADAFFTTFHIYLVSAAIEFLGLMVLTVQAHEHSTEPWS-----------RVFLFV 164
Query: 130 SLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV 189
LYL + G GG +G+LP GA QFDE G + + +FN+++ + + A+I VT +V++
Sbjct: 165 GLYLVALGVGGIKGSLPPHGAEQFDEETSSGRRQRSFFFNYFIFSLSCGALIAVTVVVWL 224
Query: 190 FTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI--KNRKLS 247
K W GF VS+ A I + AG +YR++ P SP+ + +VL A+ K +K
Sbjct: 225 EDNKGWSYGFGVSTAAILISVPVFLAGSRVYRLKVPSGSPITTLFKVLTAALYAKYKKRR 284
Query: 248 LPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVK 307
+ N+ + + T + + F ++ + ++ P R CT QV++VK
Sbjct: 285 TSRIVVTCHTRNDCDDSVTKQNCDGDDGFLGSFLGEVVRERESLPRPLR-CTEEQVKDVK 343
Query: 308 ILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLP 367
I+ +++PI STI++N CLAQL TFS+ Q + M+ LGS VP +++PV P++FM IL P
Sbjct: 344 IVIKILPIFMSTIMLNCCLAQLSTFSVQQASTMNTKLGSFTVPPAALPVFPVVFMMILAP 403
Query: 368 LYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRN----------- 416
Y +P ARK T +GIT LQR+G GLVLS V+M VA LVE R++
Sbjct: 404 TYNHLLLPLARKSTKTETGITHLQRIGTGLVLSIVAMAVAALVETKRKHVVVSCCSNNNS 463
Query: 417 AFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFG 476
+ + P I+ W++ QY G AD+FT G++EFF+ EAP+ M++LA+S ++ SL+ G
Sbjct: 464 SSYSSSPLPITFLWVAIQYVFLGSADLFTLAGMMEFFFTEAPSTMRSLATSLSWASLAMG 523
Query: 477 YFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAW 536
Y+ SS V +N VT WL G+++N+ ++ FYW + ++S +N + YL+ A+
Sbjct: 524 YYFSSVLVSAVNFVTG--LNHHNPWLLGENLNQYHLERFYWLMCVLSGINFLHYLFWASR 581
Query: 537 YKYK 540
Y Y+
Sbjct: 582 YVYR 585
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYR6|PTR49_ARATH Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 317/572 (55%), Gaps = 23/572 (4%)
Query: 2 GDKVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF 61
G + N+ + GG+ A F+F E M + ++MV + MH +SN + NF
Sbjct: 56 GKPIANLSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSSNAVNNFL 115
Query: 62 GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHP--PDCGKSSCL 119
G + ++GGF++D +L R+ T IF T+ ++ L+ +T+ A K P +CG+ S L
Sbjct: 116 GISQASSVLGGFLADAYLGRYWTIAIFTTMYLVGLIGITLGASLKMFVPDQSNCGQLSLL 175
Query: 120 KGAIAA-------YFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172
G Y Y LY+ FG G R + +FGA QFDE L +FNF+
Sbjct: 176 LGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDEKSKDYKTHLDRFFNFFY 235
Query: 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVR 232
L+ T+ A+I T +VYV E W + F +VA I AG LYR + PG SPL R
Sbjct: 236 LSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTR 295
Query: 233 VAQVLVVAIKNRKLSLPDNP-EELYEINEKERASTWER-IPHANQFRCLDKAAI-MPKDS 289
VAQVLV A + R + + LYE+ + A R IPH+N F LDKAA+ + +D
Sbjct: 296 VAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSAINGSRKIPHSNDFIWLDKAALELKEDG 355
Query: 290 AVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKV 349
+PW++CTVTQVEEVKIL R++PI TI+++ L + T S+ Q ++ H+ +K+
Sbjct: 356 LEPSPWKLCTVTQVEEVKILIRLIPIPTCTIMLSLVLTEYLTLSVQQAYTLNTHIQHLKL 415
Query: 350 PTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGL 409
P + +PV P L + ++L LY FVP R+ITG+P G +QLQRVGIGL +S +S+ AGL
Sbjct: 416 PVTCMPVFPGLSIFLILSLYYSVFVPITRRITGNPHGASQLQRVGIGLAVSIISVAWAGL 475
Query: 410 VEVIRRN-------AFN-ETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGM 461
E RR+ FN T ++ +WL QYC+ GIA++F +GLLEF Y+EAP M
Sbjct: 476 FENYRRHYAIQNGFEFNFLTQMPDLTAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAM 535
Query: 462 KTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
K++ S++ L+ G F ++ +I+ A T+ + WL ++IN + YW L +
Sbjct: 536 KSIGSAYAALAGGLGCFAATILNNIVKAATR--DSDGKSWL-SQNINTGRFDCLYWLLTL 592
Query: 522 VSVLNLVLYLYAAAWYKYKPENCSDIKPKPLM 553
+S LN ++L++A YKY+ + K ++
Sbjct: 593 LSFLNFCVFLWSAHRYKYRAIESEEDKSSAVL 624
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LFB8|PTR5_ARATH Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 193/550 (35%), Positives = 319/550 (58%), Gaps = 18/550 (3%)
Query: 4 KVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGS 63
K N + G ++AC F+ E + + +++ Y + +M+ + AS +++N+ G+
Sbjct: 19 KPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGT 78
Query: 64 TFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAI 123
+ L+G FI+D +L R+ T F + + + +LTI A L P G++
Sbjct: 79 CYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTPTCSGETCHATAGQ 138
Query: 124 AAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183
A + +LYL + G GG + + +FGA QFD+ D K ++ +S+FN++ V A+I
Sbjct: 139 TAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIAS 198
Query: 184 TGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243
+ +V++ W G V +VA I ++ AG YR+Q+PG SPL R+ QV+V + +
Sbjct: 199 SVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRK 258
Query: 244 RKLSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMP----KDSAVAAPWRVC 298
K+ +P++ LYE + E + R + H DKAA+ K +A ++ W++C
Sbjct: 259 SKVKIPEDESLLYENQDAESSIIGSRKLEHTKILTFFDKAAVETESDNKGAAKSSSWKLC 318
Query: 299 TVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIPVI 357
TVTQVEE+K L R++PI A+ I+ + +Q+ T + QG +D H+G + K+P++S+ +
Sbjct: 319 TVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLF 378
Query: 358 PLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR--- 414
L + P+Y+ VPFARK TGH G TQLQR+GIGLV+S SM AG++EV R
Sbjct: 379 DTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNY 438
Query: 415 ---RNAFN-ETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTY 470
N +N ET P +++FW QY + G A++FTFIG LEFFY +AP M++L S+ +
Sbjct: 439 VQTHNLYNEETIP--MTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL 496
Query: 471 LSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLY 530
+++FG +LS+ V ++ VT+ + + GW+ K++N +++ F+W LA +S LN ++Y
Sbjct: 497 TAIAFGNYLSTFLVTLVTKVTR--SGGRPGWI-AKNLNNGHLDYFFWLLAGLSFLNFLVY 553
Query: 531 LYAAAWYKYK 540
L+ A WY YK
Sbjct: 554 LWIAKWYTYK 563
|
Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter. Involved in the uptake of peptides during pollen germination and tube growth. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9M390|PTR1_ARATH Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 320/549 (58%), Gaps = 21/549 (3%)
Query: 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFL 66
N ++ G ++AC F+ E + + G ++V Y ++ ++ A A+N +TN+ G+ ++
Sbjct: 21 NKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYI 80
Query: 67 LCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCL-KGAIAA 125
L+G FI+D +L R+ T F + V + +LT+ A L P +C +C + A
Sbjct: 81 TPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQTA 140
Query: 126 YFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185
F+ +LY+ + G GG + + +FGA QFDEND +S+FN++ + V A+I T
Sbjct: 141 VFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATV 200
Query: 186 IVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRK 245
+V++ W GF V +VA I + G YR+Q+PG SPL R+ QV+V A +
Sbjct: 201 LVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKIS 260
Query: 246 LSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMPKDSAV----AAPWRVCTV 300
+ +P++ L+E + E R + H + + DKAA+ + ++ PWR+C+V
Sbjct: 261 VKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSV 320
Query: 301 TQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIPVIPL 359
TQVEE+K + ++P+ A+ I+ T +Q+ T + QG MD H+G + ++P++S+ +
Sbjct: 321 TQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDT 380
Query: 360 LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR----- 414
+ + P+Y+ F +P ARK T + G TQLQR+GIGLV+S +M AG++EV+R
Sbjct: 381 VSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVK 440
Query: 415 -RNAFNETPPKQI--SLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL 471
NA+++ KQI S+FW QY + G A++FTFIG LEFFY +AP M++L S+ +
Sbjct: 441 THNAYDQ---KQIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLT 497
Query: 472 SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYL 531
+++ G +LS+ V ++ +TK+ K GW+ ++N+ +++ F++ LA +S LN ++YL
Sbjct: 498 TVALGNYLSTVLVTVVMKITKK--NGKPGWIP-DNLNRGHLDYFFYLLATLSFLNFLVYL 554
Query: 532 YAAAWYKYK 540
+ + YKYK
Sbjct: 555 WISKRYKYK 563
|
Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter with low selectivity. No transport of amino acids. Arabidopsis thaliana (taxid: 3702) |
| >sp|P46032|PTR2_ARATH Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 307/545 (56%), Gaps = 16/545 (2%)
Query: 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLC 68
++ G ++AC F+ E + + +++ Y ++H A+ +T + G+ +L
Sbjct: 40 EKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTP 99
Query: 69 LVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAY-- 126
L+G ++D + R+ T F + + + LT+ A L P +C C A Y
Sbjct: 100 LIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGDFCPSATPAQYAM 159
Query: 127 FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186
F+G LYL + G GG + + +FGA QFD+ D + AS+FN++ + + A++ + +
Sbjct: 160 FFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLL 219
Query: 187 VYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKL 246
V++ + W LGF + +V + + + G LYR Q+PG SP+ R++QV+V + + +
Sbjct: 220 VWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSV 279
Query: 247 SLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMPKDSAVAA----PWRVCTVT 301
+P++ LYE +K A R I H + + LDKAA++ ++ + + WR+CTVT
Sbjct: 280 KVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEESKSGDYSNSWRLCTVT 339
Query: 302 QVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLF 361
QVEE+KIL RM PI AS I+ + AQ+ T + QG AM+ +GS ++P +++
Sbjct: 340 QVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTAS 399
Query: 362 MSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNET 421
+ I +PLY+ F VP ARK TG G T++QR+GIGL +S + M A +VE+IR + N+
Sbjct: 400 VIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDL 459
Query: 422 ------PPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSF 475
P IS+ W QY I G A++F FIG LEFFY ++P M++L S+ L+ +
Sbjct: 460 GLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNAL 519
Query: 476 GYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAA 535
G +LSS + ++ T R ++GW+ ++N +++ F+W LA +S++N+ +Y ++AA
Sbjct: 520 GNYLSSLILTLVTYFTTR--NGQEGWIS-DNLNSGHLDYFFWLLAGLSLVNMAVYFFSAA 576
Query: 536 WYKYK 540
YK K
Sbjct: 577 RYKQK 581
|
Peptide transporter. Mediates the transport of di- and tripeptides. High affinity, low capacity transporter. Can also transport histidine. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LSE8|PTR35_ARATH Putative peptide/nitrate transporter At3g25280 OS=Arabidopsis thaliana GN=At3g25280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 310/548 (56%), Gaps = 42/548 (7%)
Query: 1 MGDKVENIKQK-------GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGA 53
M +K E+ K K GG RA + V V +EN+ FIANG + V YF MH+ A A
Sbjct: 5 MEEKFEDWKGKEAIPGKHGGIRAASIVCVVVMMENIVFIANGFNFVKYFMGSMHYTPATA 64
Query: 54 SNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC 113
+N +TNF G++FLL L GGFI+D+F++ F T ++F +E++ L++LT QA++ L P
Sbjct: 65 ANMVTNFMGTSFLLTLFGGFIADSFVTHFTTFIVFCCIELMGLILLTFQAHNPKLLPEKD 124
Query: 114 GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173
S L+ AI + LY + G GG + +LP+ G Q D +P + ++ +F++
Sbjct: 125 KTPSTLQSAI---LFTGLYAMAIGTGGLKASLPSHGGDQIDRRNP---RLISRFFDWLYF 178
Query: 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRV 233
+ ++ VT ++++ +K W F +S L G YR ++P SPL ++
Sbjct: 179 SICSGCLLAVTVVLWIEEKKGWIWSFNISVGILATALCIFTVGLPFYRFKRPNGSPLKKI 238
Query: 234 AQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAA 293
A V++ A +NR N +L E + S ++ H N+ + +DKA + S
Sbjct: 239 AIVIISAARNR------NKSDLDEEMMRGLISIYKNNSH-NKLKWIDKATLNKNISE--- 288
Query: 294 PWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHL-GSIKVPTS 352
T+VEE + ++PI STI+M+ C+AQL TFS QG M+ L S ++P
Sbjct: 289 -------TEVEETRTFLGLLPIFGSTIVMSCCVAQLSTFSAQQGMLMNKKLFHSFEIPVP 341
Query: 353 SIPVIPLLFMSILLPLYEFFFVPFARKI---TGHPSGITQLQRVGIGLVLSAVSMTVAGL 409
S+ IPL+FM + +PLYEF F +KI + S L+R+G+GL LS+VSM V+ +
Sbjct: 342 SLTAIPLIFMLLSIPLYEF----FGKKISSGNNNRSSSFNLKRIGLGLALSSVSMAVSAI 397
Query: 410 VEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFT 469
VE R++ + IS+ WL FQY + ++DM T G+LEFFY+EAP+ MK+++++
Sbjct: 398 VEAKRKHEVVHNNFR-ISVLWLVFQYLMLSVSDMLTLGGMLEFFYREAPSNMKSISTALG 456
Query: 470 YLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVL 529
+ S + G+FLS+ V++ NAVT R+ WL G+D+NK + LFY L +++ LNL+
Sbjct: 457 WCSTALGFFLSTTLVEVTNAVTGRL---GHQWLGGEDLNKTRLELFYVLLCVLNTLNLLN 513
Query: 530 YLYAAAWY 537
Y++ A Y
Sbjct: 514 YIFWAKRY 521
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 597 | ||||||
| 225450417 | 736 | PREDICTED: probable peptide/nitrate tran | 0.961 | 0.779 | 0.648 | 0.0 | |
| 357441977 | 606 | Peptide transporter PTR1 [Medicago trunc | 0.976 | 0.962 | 0.616 | 0.0 | |
| 296089862 | 626 | unnamed protein product [Vitis vinifera] | 0.961 | 0.916 | 0.648 | 0.0 | |
| 356574054 | 618 | PREDICTED: probable peptide/nitrate tran | 0.978 | 0.944 | 0.622 | 0.0 | |
| 356534943 | 604 | PREDICTED: probable peptide/nitrate tran | 0.978 | 0.966 | 0.622 | 0.0 | |
| 356505723 | 582 | PREDICTED: nitrate transporter 1.2-like | 0.926 | 0.950 | 0.646 | 0.0 | |
| 357511669 | 585 | Peptide transporter PTR1 [Medicago trunc | 0.909 | 0.928 | 0.647 | 0.0 | |
| 255543056 | 640 | nitrate transporter, putative [Ricinus c | 0.944 | 0.881 | 0.616 | 0.0 | |
| 224124288 | 623 | predicted protein [Populus trichocarpa] | 0.963 | 0.922 | 0.608 | 0.0 | |
| 449454111 | 662 | PREDICTED: probable peptide/nitrate tran | 0.904 | 0.815 | 0.620 | 0.0 |
| >gi|225450417|ref|XP_002276071.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/577 (64%), Positives = 453/577 (78%), Gaps = 3/577 (0%)
Query: 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLV 70
KGGFRA F+++ ++LENMGF+AN +S+ YF MHFDL+GA+NTLTNF G+TFLL LV
Sbjct: 140 KGGFRASMFIYILTSLENMGFVANMVSLFSYFYGLMHFDLSGAANTLTNFMGATFLLSLV 199
Query: 71 GGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGS 130
GGF+SDT LSR TCLIFGT+E+L L+++TIQAYS LHP DCGK SC++G A FY S
Sbjct: 200 GGFVSDTLLSRLNTCLIFGTIELLGLMLMTIQAYSNKLHPADCGKPSCVEGGTAVMFYVS 259
Query: 131 LYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF 190
L LY+ G GG RG LPA GA QF++ DP A+ALAS+FN+ +L+ TV A +GVT IV+V
Sbjct: 260 LCLYALGSGGVRGALPALGADQFNQKDPNEAEALASFFNWVILSATVGASVGVTVIVWVS 319
Query: 191 TEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250
+ +W+ GF +S V FIG I LA G+ YRIQ G+SP++R QV+VVAIKNR LS P+
Sbjct: 320 STVTWYWGFFISLVTAFIGFIVLALGRRFYRIQPHGQSPIIRTVQVIVVAIKNRSLSPPE 379
Query: 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILT 310
+P ELYEIN++ T ++ H +QFRCLDKAAI+ KDS PW VCTVTQVEEVKILT
Sbjct: 380 SPGELYEINDQVTDFTDPKLAHTDQFRCLDKAAILGKDSE-PRPWEVCTVTQVEEVKILT 438
Query: 311 RMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYE 370
RM+PIL STI+MNTCLAQLQTFS+ QG MD LGS +VP SSIP+IPL+FMSIL+P+YE
Sbjct: 439 RMLPILFSTIIMNTCLAQLQTFSVHQGNEMDRFLGSFEVPASSIPIIPLVFMSILIPIYE 498
Query: 371 FFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430
F FVPFARKITGHP+GITQLQRVGIGLVLSA+SM VAGLVEV RRN E PP++ISLFW
Sbjct: 499 FVFVPFARKITGHPAGITQLQRVGIGLVLSAISMAVAGLVEVKRRNEALEIPPRKISLFW 558
Query: 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAV 490
LSFQY IFGIADMFT +GLLEFFYKEAP GM++L++SFT++SLSFGYFLS+ FVDIIN+V
Sbjct: 559 LSFQYGIFGIADMFTLVGLLEFFYKEAPKGMRSLSTSFTWVSLSFGYFLSTIFVDIINSV 618
Query: 491 TKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSD--IK 548
TKRI PSKQGWLHG INKNN+NLFY+FLAI+S +N V YLY A+WYKYK E+ D +K
Sbjct: 619 TKRIAPSKQGWLHGSYINKNNLNLFYYFLAILSCINFVNYLYWASWYKYKAEDRPDTELK 678
Query: 549 PKPLMDPSAKEEKIDQDDGKAKQYGAASSDDGIIGKE 585
K L P ++ QD+ A GAAS++ KE
Sbjct: 679 LKALSAPPVFRKESTQDNIGAITNGAASAEHTEDAKE 715
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357441977|ref|XP_003591266.1| Peptide transporter PTR1 [Medicago truncatula] gi|355480314|gb|AES61517.1| Peptide transporter PTR1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/607 (61%), Positives = 466/607 (76%), Gaps = 24/607 (3%)
Query: 1 MGDK---------VENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLA 51
MGDK ++ KQKGGFRA F+FV SAL+NMGF+ N +S+VLYF MHFDL+
Sbjct: 1 MGDKEVKEELKPIIQWKKQKGGFRASMFIFVLSALDNMGFVTNMVSLVLYFIGVMHFDLS 60
Query: 52 GASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPP 111
++NTLTNF GSTFLL LVG FISDT+L+RF TCL+FG+LEV+ALVM+T+QA NLHP
Sbjct: 61 SSANTLTNFMGSTFLLSLVGAFISDTYLNRFTTCLVFGSLEVMALVMITVQAALDNLHPK 120
Query: 112 DCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171
CGKSSC++G IA FY SL LY+ G GG RG+L AFGA QFDE DP AKALA++FN+
Sbjct: 121 ACGKSSCVEGGIAVMFYTSLCLYALGMGGVRGSLTAFGANQFDEKDPNEAKALATFFNWL 180
Query: 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLV 231
LL++T+ +VIGVTGIV+V T+K+W GF + +VA+ IG + LA GK YRI+ PGESP++
Sbjct: 181 LLSSTLGSVIGVTGIVWVSTQKAWHWGFFIITVASSIGFVTLAIGKPFYRIKTPGESPIL 240
Query: 232 RVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAV 291
R+ QV+VVA KNRKL LP++ E+LYE+ + +T E+I H NQ R LDKAAI+ ++S
Sbjct: 241 RIIQVIVVAFKNRKLQLPESNEQLYEV---YKDATIEKIVHTNQMRFLDKAAILQENSES 297
Query: 292 AAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPT 351
PW+VCTVTQVEEVKILTRM+PILASTI+MNTCLAQLQTFS+ QG +M+ LGS VP
Sbjct: 298 QQPWKVCTVTQVEEVKILTRMLPILASTIVMNTCLAQLQTFSVQQGNSMNLKLGSFTVPA 357
Query: 352 SSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVE 411
SSIPVIPL+F+ L+P+YE FFVPF RKIT HPSG+TQLQRVG+GLVLSA+SMT+AG +E
Sbjct: 358 SSIPVIPLIFLCTLIPIYELFFVPFIRKITHHPSGVTQLQRVGVGLVLSAISMTIAGFIE 417
Query: 412 VIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL 471
V RR+ + P K ISLFWLSFQY IFGIADMFT +GLLEFFY+EAP+ MK+L++SFT+L
Sbjct: 418 VKRRDQGRKDPSKPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSTMKSLSTSFTFL 477
Query: 472 SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYL 531
S+S GYFLS+ FV++IN VTKRITPSKQGWL G D+N+NN+NLFYWFLAI+S LN +L
Sbjct: 478 SMSLGYFLSTVFVNVINTVTKRITPSKQGWLQGFDLNQNNLNLFYWFLAILSCLNFFNFL 537
Query: 532 YAAAWYKYKPE----NCSDIKPKPLM-------DPSAKEEKIDQDDGKAKQYGAASSDDG 580
Y A+WYKYK E N ++ L+ D AK ++ Q +A G +SSD+
Sbjct: 538 YWASWYKYKSEEDSNNSKELGETHLLMVGGRKHDDKAKAKESSQTS-EANTEGPSSSDET 596
Query: 581 IIGKEKE 587
GKEKE
Sbjct: 597 DDGKEKE 603
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089862|emb|CBI39681.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/577 (64%), Positives = 453/577 (78%), Gaps = 3/577 (0%)
Query: 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLV 70
KGGFRA F+++ ++LENMGF+AN +S+ YF MHFDL+GA+NTLTNF G+TFLL LV
Sbjct: 30 KGGFRASMFIYILTSLENMGFVANMVSLFSYFYGLMHFDLSGAANTLTNFMGATFLLSLV 89
Query: 71 GGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGS 130
GGF+SDT LSR TCLIFGT+E+L L+++TIQAYS LHP DCGK SC++G A FY S
Sbjct: 90 GGFVSDTLLSRLNTCLIFGTIELLGLMLMTIQAYSNKLHPADCGKPSCVEGGTAVMFYVS 149
Query: 131 LYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF 190
L LY+ G GG RG LPA GA QF++ DP A+ALAS+FN+ +L+ TV A +GVT IV+V
Sbjct: 150 LCLYALGSGGVRGALPALGADQFNQKDPNEAEALASFFNWVILSATVGASVGVTVIVWVS 209
Query: 191 TEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250
+ +W+ GF +S V FIG I LA G+ YRIQ G+SP++R QV+VVAIKNR LS P+
Sbjct: 210 STVTWYWGFFISLVTAFIGFIVLALGRRFYRIQPHGQSPIIRTVQVIVVAIKNRSLSPPE 269
Query: 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILT 310
+P ELYEIN++ T ++ H +QFRCLDKAAI+ KDS PW VCTVTQVEEVKILT
Sbjct: 270 SPGELYEINDQVTDFTDPKLAHTDQFRCLDKAAILGKDSE-PRPWEVCTVTQVEEVKILT 328
Query: 311 RMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYE 370
RM+PIL STI+MNTCLAQLQTFS+ QG MD LGS +VP SSIP+IPL+FMSIL+P+YE
Sbjct: 329 RMLPILFSTIIMNTCLAQLQTFSVHQGNEMDRFLGSFEVPASSIPIIPLVFMSILIPIYE 388
Query: 371 FFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430
F FVPFARKITGHP+GITQLQRVGIGLVLSA+SM VAGLVEV RRN E PP++ISLFW
Sbjct: 389 FVFVPFARKITGHPAGITQLQRVGIGLVLSAISMAVAGLVEVKRRNEALEIPPRKISLFW 448
Query: 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAV 490
LSFQY IFGIADMFT +GLLEFFYKEAP GM++L++SFT++SLSFGYFLS+ FVDIIN+V
Sbjct: 449 LSFQYGIFGIADMFTLVGLLEFFYKEAPKGMRSLSTSFTWVSLSFGYFLSTIFVDIINSV 508
Query: 491 TKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSD--IK 548
TKRI PSKQGWLHG INKNN+NLFY+FLAI+S +N V YLY A+WYKYK E+ D +K
Sbjct: 509 TKRIAPSKQGWLHGSYINKNNLNLFYYFLAILSCINFVNYLYWASWYKYKAEDRPDTELK 568
Query: 549 PKPLMDPSAKEEKIDQDDGKAKQYGAASSDDGIIGKE 585
K L P ++ QD+ A GAAS++ KE
Sbjct: 569 LKALSAPPVFRKESTQDNIGAITNGAASAEHTEDAKE 605
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574054|ref|XP_003555167.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/606 (62%), Positives = 471/606 (77%), Gaps = 22/606 (3%)
Query: 2 GDKVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF 61
GDK + KGGFRA F+FV SAL+NMGF+AN +S+VLYF MHFDL+ ++NTLTNF
Sbjct: 19 GDKEVKEELKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSNSANTLTNFM 78
Query: 62 GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKG 121
GSTFLL LVGGFISDT+ +R TCL+FG+LEVLALVMLT+QA +LHP CGKSSC+KG
Sbjct: 79 GSTFLLSLVGGFISDTYFNRLTTCLLFGSLEVLALVMLTVQAALDHLHPDFCGKSSCVKG 138
Query: 122 AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVI 181
IA FY SLYL + G GG RG+L AFGA QF E +P+ AKALASYFN+ LL++T+ ++I
Sbjct: 139 GIAVMFYSSLYLLALGMGGVRGSLTAFGADQFGEKNPQEAKALASYFNWLLLSSTLGSII 198
Query: 182 GVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI 241
GVTG+V+V T+K+W GF++ +VA+ IG + LA GK YRI+ PG+SP+ R+AQV+VVA
Sbjct: 199 GVTGVVWVSTQKAWHWGFIIITVASSIGFLTLALGKPFYRIKTPGQSPISRIAQVIVVAF 258
Query: 242 KNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVT 301
KNRKL LP++ EELYE+ E+ +T E+I H NQ R LD+A+I+ +++ + PW+VCTVT
Sbjct: 259 KNRKLPLPESNEELYEVYEE---ATLEKIAHTNQMRFLDRASIL-QENIESRPWKVCTVT 314
Query: 302 QVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLF 361
QVEEVKILTRM+PILASTI+MNTCLAQLQTFS+ QG M+ LGS VP SIPVIPLLF
Sbjct: 315 QVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPAPSIPVIPLLF 374
Query: 362 MSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNET 421
MSIL+PLYEFFFVPFARKIT HPSG+TQLQRVG+GLVLS++SMT+AG++EV RR+ +
Sbjct: 375 MSILIPLYEFFFVPFARKITHHPSGVTQLQRVGVGLVLSSISMTIAGIIEVKRRDQGRKD 434
Query: 422 PPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSS 481
P + ISLFWLSFQY IFGIADMFT +GLLEFFY+EAP MK+L++SFTYLS+S GYFLS+
Sbjct: 435 PSRPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPVTMKSLSTSFTYLSMSLGYFLST 494
Query: 482 AFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKP 541
FVD+INAVTKR+TPSKQGWLHG D+N+NN+NLFYWFLAI+S LN +LY A+WYKYK
Sbjct: 495 IFVDVINAVTKRVTPSKQGWLHGLDLNQNNLNLFYWFLAILSCLNFFNFLYWASWYKYKA 554
Query: 542 E-NCSDIKPKPLMDPSAKEEKIDQDDGK--------------AKQYGAASSDDGIIGKE- 585
E N S + K L + E K D+++ K A G +SSD+ G+
Sbjct: 555 EDNNSKVNLKALR--TTGERKQDEEEKKDMRVKAKESSQTSEANTEGPSSSDETDDGRNS 612
Query: 586 KEFIHD 591
+E+ H
Sbjct: 613 REWKHS 618
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534943|ref|XP_003536010.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/609 (62%), Positives = 476/609 (78%), Gaps = 25/609 (4%)
Query: 1 MGDK-VENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTN 59
MGDK V+ +QKGGFRA F+FV SAL+NMGF+AN +S+VLYF MHFDL+ ++NTLTN
Sbjct: 1 MGDKEVKEEEQKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSNSANTLTN 60
Query: 60 FFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCL 119
F GSTFLL LVGGFISDT+ +R TCL+FG+LEVLALVMLT+QA +LHP CGKSSC+
Sbjct: 61 FMGSTFLLSLVGGFISDTYFNRLTTCLLFGSLEVLALVMLTVQAGLDHLHPDYCGKSSCV 120
Query: 120 KGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEN-DPKGAKALASYFNFYLLATTVA 178
KG IA FY SLYL + G GG RG+L AFGA QFDE +P AKALAS+FN+ LL++T+
Sbjct: 121 KGGIAVMFYSSLYLLALGMGGVRGSLTAFGADQFDEKKNPGEAKALASFFNWILLSSTLG 180
Query: 179 AVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLV 238
++IGVTG+V+V T+K+W GF++ ++A+ IG + LA GK YRI+ PG+SP++R+AQV+V
Sbjct: 181 SIIGVTGVVWVSTQKAWHWGFIIITIASSIGFLTLALGKPFYRIKTPGQSPILRIAQVIV 240
Query: 239 VAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVC 298
VA KNRKL LP++ EELYE+ E +T E+I H NQ R LD+A+I+ +++ + W+VC
Sbjct: 241 VAFKNRKLPLPESDEELYEVYED---ATLEKIAHTNQMRFLDRASIL-QENIESQQWKVC 296
Query: 299 TVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIP 358
TVTQVEEVKILTRM+PILASTI+MNTCLAQLQTFS+ QG+ M+ LGS VP SIPVIP
Sbjct: 297 TVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGSVMNLKLGSFTVPAPSIPVIP 356
Query: 359 LLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAF 418
LLFMSIL+PLYEFFFVPFARKIT HPSG+TQLQRVG+GLVLSA+SMT+AG++EV RR+
Sbjct: 357 LLFMSILIPLYEFFFVPFARKITHHPSGVTQLQRVGVGLVLSAISMTIAGIIEVKRRDQG 416
Query: 419 NETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYF 478
+ P + ISLFWLSFQY IFG+ADMFT +GLLEFFY+EAP MK+L++SFTYLS+S GYF
Sbjct: 417 RKDPSRPISLFWLSFQYAIFGVADMFTLVGLLEFFYREAPETMKSLSTSFTYLSMSLGYF 476
Query: 479 LSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYK 538
LS+ FVD+INAVTKR+TPSKQGWLHG D+N+NN+NLFYWFLAI+S LN +LY A+WYK
Sbjct: 477 LSTVFVDVINAVTKRVTPSKQGWLHGLDLNQNNLNLFYWFLAILSCLNFFNFLYWASWYK 536
Query: 539 YKPE-NCSDIKPK-PLMDPSAKEEKIDQDDGK--------------AKQYGAASSDDGII 582
YK E N S + K PL + E K D+++ K A G +SSD+
Sbjct: 537 YKVEDNNSKVNLKAPL--KTVGERKQDEEEKKDMRVKARESSQTSEANTEGPSSSDETDD 594
Query: 583 GKE-KEFIH 590
G+ +E+ H
Sbjct: 595 GRNSREWKH 603
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505723|ref|XP_003521639.1| PREDICTED: nitrate transporter 1.2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/557 (64%), Positives = 446/557 (80%), Gaps = 4/557 (0%)
Query: 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLC 68
+ KGGF A F+FV SAL+NMGF+AN +S+VLYF MHFDLA ++NTLTNF GST+LL
Sbjct: 24 RSKGGFMASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTYLLS 83
Query: 69 LVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128
LVGGFISDT+L+RF TCL+FG+LEVLAL MLT+QA SK+LHP CGKSSC+KG IA FY
Sbjct: 84 LVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASKHLHPEACGKSSCVKGGIAVMFY 143
Query: 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVY 188
SL L + G GG RG++ AFGA QFDE DP AKALAS+FN+ LL++TV A+ GVTG+V+
Sbjct: 144 TSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVW 203
Query: 189 VFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248
V T+K+W GF + ++A+ +G + LA GK YRI+ PG+SP +R+AQV+VV+ KNRKLSL
Sbjct: 204 VSTQKAWHWGFFIITIASSVGFVTLALGKQFYRIKTPGDSPTLRIAQVIVVSFKNRKLSL 263
Query: 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKI 308
P++ ELYEI++K+ +T E+I H NQ R LDKAAI+ + S A W++CTVTQVEEVKI
Sbjct: 264 PESHGELYEISDKD--ATAEKIAHTNQMRFLDKAAIIQESSKPQA-WKICTVTQVEEVKI 320
Query: 309 LTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPL 368
LTRM+PI+ASTI++NTC+AQLQTFS+ QG MD LGS+ VP SIPVIPL+F+S+L+PL
Sbjct: 321 LTRMLPIVASTIILNTCMAQLQTFSVQQGNVMDLKLGSLTVPAPSIPVIPLVFISVLVPL 380
Query: 369 YEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISL 428
YE FFVPFARKIT HPSGITQLQRVG+GLVLSA+SM VAG+VEV RR+ + P K ISL
Sbjct: 381 YELFFVPFARKITNHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSKPISL 440
Query: 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488
FWLSFQY IFGIADMFT +GLLEFFY+E+PA MK+L++S T+LS S GYFLS+ FV++IN
Sbjct: 441 FWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSLTWLSTSLGYFLSTVFVNVIN 500
Query: 489 AVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDIK 548
AVTKRIT SKQGWLHG D+N+NN+NLFYWFLA +S LN YLY A+ Y+YK E+ S
Sbjct: 501 AVTKRITRSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASRYQYKRED-SGPG 559
Query: 549 PKPLMDPSAKEEKIDQD 565
KPL + K + QD
Sbjct: 560 FKPLGEMPLKRVERKQD 576
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357511669|ref|XP_003626123.1| Peptide transporter PTR1 [Medicago truncatula] gi|87241322|gb|ABD33180.1| TGF-beta receptor, type I/II extracellular region [Medicago truncatula] gi|355501138|gb|AES82341.1| Peptide transporter PTR1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/548 (64%), Positives = 440/548 (80%), Gaps = 5/548 (0%)
Query: 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLC 68
++KGGFRA F+FV SAL+NMGF+AN +S+VLYF MHFD+ ++NTLTNF GSTFLL
Sbjct: 18 RKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDIPSSANTLTNFMGSTFLLS 77
Query: 69 LVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128
LVGGFISDT+L+RF TCL+FG+LEVLAL ++T QA S +LHP CGKSSC+KG I FY
Sbjct: 78 LVGGFISDTYLNRFTTCLLFGSLEVLALALVTFQAASDHLHPNACGKSSCVKGGIEFMFY 137
Query: 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVY 188
SL L + G GG RG++ AFGA QF+E D AKALAS+FN+ LL++T+ A+ GVTG+V+
Sbjct: 138 TSLSLLALGIGGVRGSMTAFGADQFEEKDSNEAKALASFFNWLLLSSTLGAITGVTGVVW 197
Query: 189 VFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248
V T+++W GF + ++A+ IG + LA GK YRI+ PG+SP +R+AQV+VVA KNRKLSL
Sbjct: 198 VSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPGDSPTIRIAQVIVVAFKNRKLSL 257
Query: 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKI 308
P++ EELYEI++K+ T E+I H Q R LDKAAI P++ PW+VCTVTQVEEVKI
Sbjct: 258 PESHEELYEISDKD--GTVEKIVHTKQMRFLDKAAI-PQEYIKPQPWKVCTVTQVEEVKI 314
Query: 309 LTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPL 368
LTRM+PI+ASTI+MNTCLAQLQTFS+ QG M+ LGS VP SSIPVIPL+F+SIL+P+
Sbjct: 315 LTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPASSIPVIPLIFISILVPI 374
Query: 369 YEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISL 428
YE FFVPFARKIT HPSGITQLQRVG+GLVLS +SMTVAG+VEV RR+ + P ISL
Sbjct: 375 YELFFVPFARKITNHPSGITQLQRVGVGLVLSVISMTVAGIVEVKRRDQSRKNPSNPISL 434
Query: 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488
FWLSFQY IFGIADMFT +GLLEFFY+E+P+ MK+L++SFT+LS+S GYFLS+ FV++IN
Sbjct: 435 FWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSFTWLSMSIGYFLSTVFVNLIN 494
Query: 489 AVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPE--NCSD 546
VTKRITPSKQGWLHG D+N++N+NLFYWFLAI+S LN YLY A+ YKYK E N S
Sbjct: 495 VVTKRITPSKQGWLHGFDLNQSNLNLFYWFLAILSCLNFFNYLYWASRYKYKSEDQNSSP 554
Query: 547 IKPKPLMD 554
I K L +
Sbjct: 555 IGLKSLHE 562
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543056|ref|XP_002512591.1| nitrate transporter, putative [Ricinus communis] gi|223548552|gb|EEF50043.1| nitrate transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/576 (61%), Positives = 449/576 (77%), Gaps = 12/576 (2%)
Query: 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLV 70
KGGFRAC FVFV AL+NMGFIAN +S+VLYF M+FD+ ++NTLTN GS FLL L+
Sbjct: 18 KGGFRACMFVFVLVALDNMGFIANMVSLVLYFLKVMYFDIPNSANTLTNLMGSIFLLTLL 77
Query: 71 GGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGS 130
GGFISDTFL++ T L+F +E+LA+V++TIQA++K+LHPP CGK C++G I Y S
Sbjct: 78 GGFISDTFLNKLYTVLLFAVIEILAMVLMTIQAHAKSLHPPYCGKPKCVEGKIEFTLYAS 137
Query: 131 LYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF 190
L L + G GG RG LP+ GA QF++NDP+ AK LA+YFN+ L+T + A +GVTGIV+V
Sbjct: 138 LALLALGSGGVRGALPSLGADQFNQNDPEEAKDLATYFNWMTLSTVLGAAVGVTGIVWVS 197
Query: 191 TEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250
+W+ GF++S++A F+G I LA GK Y +++PGESPL+R+ QV VVAIKNRKLSLP+
Sbjct: 198 VNDAWYKGFMISTIAAFVGFIVLACGKRYYHLKEPGESPLIRIVQVFVVAIKNRKLSLPE 257
Query: 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILT 310
NPEELYEI+++ER + E+I H +QFR LD+AAI+PKD AAPW+VCTVTQVEEVKILT
Sbjct: 258 NPEELYEISDEERIYSDEKIAHTDQFRFLDRAAILPKD-LTAAPWQVCTVTQVEEVKILT 316
Query: 311 RMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYE 370
RMMPIL STI+MNTCLAQLQTFS+ QG M+ +G +VP S+P+IPL+FM IL+P+YE
Sbjct: 317 RMMPILFSTIIMNTCLAQLQTFSVEQGYIMNRFIGKFEVPAPSVPIIPLVFMVILIPMYE 376
Query: 371 FFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430
FFFVPFARKI+GHPSGITQLQRVGIGLVLSA+SM VAG+VEV RR+ ++ IS+FW
Sbjct: 377 FFFVPFARKISGHPSGITQLQRVGIGLVLSAISMAVAGIVEVKRRDQAHKDLAHPISVFW 436
Query: 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAV 490
LSFQY IFGIADMFT +GLLEFFYKEAP+GMK+L++SFT+LSLSFGYFLS+ V++INA+
Sbjct: 437 LSFQYGIFGIADMFTLVGLLEFFYKEAPSGMKSLSTSFTWLSLSFGYFLSTVLVNLINAI 496
Query: 491 TKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDIKPK 550
TKR+TPSKQGWLHG DIN NN+NLFYWFLAI+S +N +YL A+WYKYK +
Sbjct: 497 TKRVTPSKQGWLHGDDINSNNLNLFYWFLAILSCINFGVYLCMASWYKYKAD-------- 548
Query: 551 PLMDPSAKEEKIDQDDGKAKQYGAASSDDGIIGKEK 586
D K E DG A++ + ++ KE+
Sbjct: 549 ---DIDLKMESKGSTDGLLPAKVASNPESSVVKKEE 581
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124288|ref|XP_002329986.1| predicted protein [Populus trichocarpa] gi|222871411|gb|EEF08542.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/592 (60%), Positives = 452/592 (76%), Gaps = 17/592 (2%)
Query: 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLC 68
K +GGFRA FV+ AL++MGF+AN +S+VLYF MHFD+ ++NTLTN GSTFLL
Sbjct: 28 KGRGGFRATMFVYGLVALDSMGFVANMVSLVLYFMGVMHFDIPTSANTLTNLMGSTFLLT 87
Query: 69 LVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128
++GGFISD +L+R T L+FG LE++ALV++TIQA++KN+HPP CGK+SC++G I Y
Sbjct: 88 VLGGFISDAYLNRLHTVLLFGFLEIMALVLITIQAHAKNMHPPACGKASCVEGGIEYMLY 147
Query: 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVY 188
SL L + G GG RG LPA GA QF+E DP+ A+ALASYFN+ L+T V AV+GVTGIV
Sbjct: 148 FSLGLLALGSGGVRGALPALGADQFNEKDPEEARALASYFNWMTLSTVVGAVVGVTGIVN 207
Query: 189 VFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248
+ WW GFLVS+V FIG + LAAGK Y ++QPG+SPL+R+AQV +AI+NR+L L
Sbjct: 208 LSMFHGWWKGFLVSTVGTFIGFVILAAGKPFYHLRQPGDSPLIRIAQVFALAIRNRRLPL 267
Query: 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKI 308
P EELYEI++KE + E++ H QFR LDKAAI+P+ + APW+VC+VTQVEEVKI
Sbjct: 268 P-KVEELYEISDKETIAYEEKLEHTEQFRFLDKAAILPEGTQ-PAPWKVCSVTQVEEVKI 325
Query: 309 LTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPL 368
LTRM+PIL STI+MNTCLAQLQTFS+ QG M +G P S+PVIPL+FM IL+P
Sbjct: 326 LTRMLPILGSTIIMNTCLAQLQTFSVQQGNDMYRKIGKHDFPAPSVPVIPLVFMVILIPA 385
Query: 369 YEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISL 428
YEFFFVPFARK TGHP+GITQLQRVG+GLVLSAVSM VAGLVEV RR+ ISL
Sbjct: 386 YEFFFVPFARKFTGHPAGITQLQRVGVGLVLSAVSMAVAGLVEVKRRD--QALKGHLISL 443
Query: 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488
FWLSFQY IFGIADMFT +GLL+FFYKEAP+ MK+L++SFT+LSLSFGYFLS+ FV++IN
Sbjct: 444 FWLSFQYGIFGIADMFTLVGLLDFFYKEAPSSMKSLSTSFTWLSLSFGYFLSTVFVNLIN 503
Query: 489 AVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENC-SDI 547
AVTKRITPS+QGWLHG+ ++ NN+NLFYWFLAI+S LN VLYLY+A+WYKYKP++ S+
Sbjct: 504 AVTKRITPSRQGWLHGQLLDYNNLNLFYWFLAILSCLNFVLYLYSASWYKYKPDDTESNN 563
Query: 548 KPKPLMDPSAKEEKIDQDDG--KAKQYGAASSDDGIIGKEKEFIHDEVKSQE 597
KPK AK D D+G AK+ A +D+ + ++E +QE
Sbjct: 564 KPK------AK----DSDEGLLLAKESSGAKTDEEESEQNAANRNEEESAQE 605
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449454111|ref|XP_004144799.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/554 (62%), Positives = 420/554 (75%), Gaps = 14/554 (2%)
Query: 2 GDKVENIK-------QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGAS 54
G + +NIK KGGFRA F+F E+MGF+AN S+V YF MHFDL A+
Sbjct: 17 GTEEKNIKVVDSRDEGKGGFRATMFIFGLLTFESMGFVANMTSLVQYFLFVMHFDLQTAA 76
Query: 55 NTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCG 114
NTLTNF GS FLL L+GGF+SDT+++R TCLIFG LEV+AL+++T+QAYS +L P
Sbjct: 77 NTLTNFMGSAFLLSLLGGFLSDTYINRLNTCLIFGFLEVIALILITVQAYSHDLLPSPLC 136
Query: 115 KSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174
C+KG IA FY SLYL + G GG RG LPA GA QF++ DPK AKAL ++FN+ LL+
Sbjct: 137 PKDCVKGRIAFVFYTSLYLLAIGSGGVRGALPALGADQFNQKDPKEAKALGTFFNYMLLS 196
Query: 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVA 234
+ A +GVT IV+V K+W+ GF +S++A +G I A GK YRIQ PG+SPL+RV
Sbjct: 197 VVIGAAVGVTLIVWVAVNKAWYWGFFISALAALVGFIIFAIGKPFYRIQVPGQSPLLRVI 256
Query: 235 QVLVVAIKNRKLSLPDNPEELYEINEK-ERASTWERIPHANQFRCLDKAAIMPKDSAVAA 293
QV+VVAIKNR+L LPD P ELYEI++K S +I H NQ R LDKAAI+PKD
Sbjct: 257 QVIVVAIKNRRLRLPDTPNELYEISDKLHMDSNHYKIVHTNQLRFLDKAAIVPKDIE-PQ 315
Query: 294 PWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAA--MDPHLGSIKVPT 351
PW VC+VTQVEEVKI+TRM+PI STI+MNTCLAQLQTFS+ QG MD LG + P
Sbjct: 316 PWNVCSVTQVEEVKIITRMVPIFVSTIIMNTCLAQLQTFSVEQGNTRIMDKSLGHFQFPA 375
Query: 352 SSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVE 411
SIPVIPL+FM+ L+PLYEFFFVPFARKIT HPSGITQLQRVG+GLVLSA++MTVAGLVE
Sbjct: 376 PSIPVIPLVFMAFLIPLYEFFFVPFARKITHHPSGITQLQRVGVGLVLSAIAMTVAGLVE 435
Query: 412 VIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL 471
V RR+ E P KQISLFWL+FQY IFG+ADMFT +GLLEFFYKEAP GM++L++SFT+L
Sbjct: 436 VKRRHQATEHPDKQISLFWLAFQYGIFGVADMFTLVGLLEFFYKEAPVGMRSLSTSFTFL 495
Query: 472 SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHG---KDINKNNVNLFYWFLAIVSVLNLV 528
SL+ GY+LSS FV+++N VTK ITPSK+GW+ G +D+N NN+NLFYWFLAI+SVLN
Sbjct: 496 SLALGYYLSSIFVNVVNKVTKNITPSKKGWVEGLIPEDLNHNNLNLFYWFLAILSVLNFF 555
Query: 529 LYLYAAAWYKYKPE 542
YLY A+WYKYK E
Sbjct: 556 HYLYWASWYKYKTE 569
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 597 | ||||||
| TAIR|locus:2025886 | 591 | AT1G59740 [Arabidopsis thalian | 0.854 | 0.862 | 0.414 | 3.7e-103 | |
| TAIR|locus:2205769 | 567 | AT1G27040 [Arabidopsis thalian | 0.840 | 0.885 | 0.398 | 6.4e-99 | |
| TAIR|locus:2006907 | 601 | AT1G33440 [Arabidopsis thalian | 0.840 | 0.835 | 0.401 | 1e-98 | |
| TAIR|locus:2196739 | 585 | NRT1:2 "AT1G69850" [Arabidopsi | 0.371 | 0.379 | 0.417 | 5.3e-98 | |
| TAIR|locus:2181655 | 624 | AT5G13400 [Arabidopsis thalian | 0.865 | 0.828 | 0.370 | 8.9e-86 | |
| TAIR|locus:2150124 | 570 | PTR5 "peptide transporter 5" [ | 0.854 | 0.894 | 0.340 | 1.7e-82 | |
| TAIR|locus:2018032 | 590 | PTR6 "peptide transporter 6" [ | 0.847 | 0.857 | 0.339 | 4.5e-82 | |
| TAIR|locus:2170683 | 589 | AT5G62730 [Arabidopsis thalian | 0.830 | 0.842 | 0.349 | 5.8e-82 | |
| TAIR|locus:2080235 | 570 | PTR1 "peptide transporter 1" [ | 0.855 | 0.896 | 0.328 | 1.5e-81 | |
| TAIR|locus:2041125 | 585 | PTR2 "peptide transporter 2" [ | 0.849 | 0.866 | 0.328 | 2.6e-79 |
| TAIR|locus:2025886 AT1G59740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 218/526 (41%), Positives = 320/526 (60%)
Query: 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFL 66
N + GG RA FV A E MG A G +++ Y NEMHF L+ A+N +TNF G+ F+
Sbjct: 38 NPNKHGGMRAALFVLGLQAFEIMGIAAVGNNLITYVINEMHFPLSKAANIVTNFVGTIFI 97
Query: 67 LCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK---SSC--LKG 121
L+GG++SD FL F T +IFG +E+ ++L++QA+ L PP C +C KG
Sbjct: 98 FALLGGYLSDAFLGSFWTIIIFGFVELSGFILLSVQAHLPQLKPPKCNPLIDQTCEEAKG 157
Query: 122 AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVI 181
A F+ +LYL + G G + + A GA QF ++ PK +K L+SYFN A ++ +I
Sbjct: 158 FKAMIFFMALYLVALGSGCVKPNMIAHGADQFSQSHPKQSKRLSSYFNAAYFAFSMGELI 217
Query: 182 GVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI 241
+T +V+V T +GF VS+ A +G+I+L +G +R ++P S +A V+V AI
Sbjct: 218 ALTLLVWVQTHSGMDIGFGVSAAAMTMGIISLVSGTMYFRNKRPRRSIFTPIAHVIVAAI 277
Query: 242 KNRKLSLPDNPEELYE----INEKERASTWERIPHANQFRCLDKAAIMPKDSAVA-APWR 296
RKL+ P +P L+ N+ +ST +PH +FR LDKA I +D+ +PWR
Sbjct: 278 LKRKLASPSDPRMLHGDHHVANDVVPSST---LPHTPRFRFLDKACIKIQDTNTKESPWR 334
Query: 297 VCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIP 355
+CTVTQVE+VK L ++PI ASTI+ NT LAQLQTFS+ QG++M+ L S +P +S+
Sbjct: 335 LCTVTQVEQVKTLISLVPIFASTIVFNTILAQLQTFSVQQGSSMNTRLSNSFHIPPASLQ 394
Query: 356 VIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRR 415
IP + + L+PLY+ F VPFARK+TGH SGI L R+GIGL LS SM A ++E RR
Sbjct: 395 AIPYIMLIFLVPLYDSFLVPFARKLTGHNSGIPPLTRIGIGLFLSTFSMVSAAMLEKKRR 454
Query: 416 NAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXXX 475
++ + + +S+FW++ Q+ IFGI++MFT +GL+EFFYK++ GM++
Sbjct: 455 DS-SVLDGRILSIFWITPQFLIFGISEMFTAVGLIEFFYKQSAKGMESFLMALTYCSYSF 513
Query: 476 XXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
V ++N +T SK GWL D+NK+ ++LFYW LA+
Sbjct: 514 GFYFSSVLVSVVNKITSTSVDSK-GWLGENDLNKDRLDLFYWLLAV 558
|
|
| TAIR|locus:2205769 AT1G27040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 208/522 (39%), Positives = 303/522 (58%)
Query: 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVG 71
GG A +FV LEN+ F+AN ++VLY KN MH LA +S+ +T F + FLL L+G
Sbjct: 29 GGMLAASFVLAVEILENLAFLANASNLVLYLKNFMHMSLARSSSEVTTFMATAFLLALLG 88
Query: 72 GFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLK-----GAIAAY 126
GF++D F S F LI ++E L L++LTIQA +L PP C S+ L+ G+ AA+
Sbjct: 89 GFLADAFFSTFVIFLISASIEFLGLILLTIQARRPSLMPPPCKSSAALRCEVVGGSKAAF 148
Query: 127 FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186
+ LYL S G GG +G+LP+ GA QFDE PKG K +++FN+Y+ + A++ VT +
Sbjct: 149 LFVGLYLVSLGIGGIKGSLPSHGAEQFDEGTPKGRKQRSTFFNYYVFCLSCGALVAVTFV 208
Query: 187 VYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVA-IKNRK 245
V++ K W GF VS+++ F+ ++ G Y+ + P SPL + +VL+ A I +
Sbjct: 209 VWIEDNKGWEWGFGVSTISIFLSILVFLLGSRFYKNKIPRGSPLTTIFKVLLAASIVSCS 268
Query: 246 LSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEE 305
N E+ + T + N CL+KA I K + W CTV QVE+
Sbjct: 269 SKTSSNHFTSREVQSEHEEKTPSQ-SLTNSLTCLNKA-IEGKTHHI---WLECTVQQVED 323
Query: 306 VKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSIL 365
VKI+ +M+PI TI++N CLAQL T+S+ Q A M+ + + VP++S+PV P++FM IL
Sbjct: 324 VKIVLKMLPIFGCTIMLNCCLAQLSTYSVHQAATMNRKIVNFNVPSASLPVFPVVFMLIL 383
Query: 366 LPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNET---- 421
P Y+ +PFARK+T GIT LQR+G+GLVLS V+M VA LVE+ R+ E
Sbjct: 384 APTYDHLIIPFARKVTKSEIGITHLQRIGVGLVLSIVAMAVAALVELKRKQVAREAGLLD 443
Query: 422 --PPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXXXXXXX 479
I+ W++ QY G AD+FT GLLEFF+ EAP+ M++LA
Sbjct: 444 SEETLPITFLWIALQYLFLGSADLFTLAGLLEFFFTEAPSSMRSLATSLSWASLALGYYL 503
Query: 480 XXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
V I+N VTK + + WL G+ +N+N ++LFYW + +
Sbjct: 504 SSVMVPIVNRVTK--SAGQSPWL-GEKLNRNRLDLFYWLMCV 542
|
|
| TAIR|locus:2006907 AT1G33440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 208/518 (40%), Positives = 309/518 (59%)
Query: 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVG 71
GG RA FV F A E M A G +++ Y NEMHF L+ ++N +TNF G+ FLL L+G
Sbjct: 40 GGTRAALFVLGFQAFEMMAIAAVGNNLITYVFNEMHFPLSKSANLVTNFIGTVFLLSLLG 99
Query: 72 GFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSS----CLK--GAIAA 125
GF+SD++L F T L+FG +E+ ++L++QA+ L PP+C S C++ G AA
Sbjct: 100 GFLSDSYLGSFRTMLVFGVIEISGFILLSVQAHLPELRPPECNMKSTTIHCVEANGYKAA 159
Query: 126 YFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185
Y +L L + G G + + + GA QF D + L+S+FN A ++ +I +T
Sbjct: 160 TLYTALCLVALGSGCLKPNIISHGANQFQRKD---LRKLSSFFNAAYFAFSMGQLIALTL 216
Query: 186 IVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRK 245
+V+V T +GF VS+ G+I+L AG YR + P S +AQV V AI RK
Sbjct: 217 LVWVQTHSGMDVGFGVSAAVMAAGMISLVAGTSFYRNKPPSGSIFTPIAQVFVAAITKRK 276
Query: 246 LSLPDNPEELYEIN-EKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVE 304
P NP +++ + + R + H+N+FR LDKA I + A+ +PWR+CT+ QV
Sbjct: 277 QICPSNPNMVHQPSTDLVRVKP---LLHSNKFRFLDKACIKTQGKAMESPWRLCTIEQVH 333
Query: 305 EVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIPVIPLLFMS 363
+VKIL ++PI A TI+ NT LAQLQTFS+ QG++M+ H+ + ++P +S+ IP + +
Sbjct: 334 QVKILLSVIPIFACTIIFNTILAQLQTFSVQQGSSMNTHITKTFQIPPASLQAIPYIILI 393
Query: 364 ILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPP 423
+PLYE FFVP ARK+TG+ SGI+ LQR+G GL L+ SM A LVE RR +F E
Sbjct: 394 FFVPLYETFFVPLARKLTGNDSGISPLQRIGTGLFLATFSMVAAALVEKKRRESFLEQNV 453
Query: 424 KQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXXXXXXXXXAF 483
+S+FW++ Q+ IFG+++MFT +GL+EFFYK++ M++
Sbjct: 454 -MLSIFWIAPQFLIFGLSEMFTAVGLVEFFYKQSSQSMQSFLTAMTYCSYSFGFYLSSVL 512
Query: 484 VDIINAVTKRI-TPSKQGWLHGKDINKNNVNLFYWFLA 520
V +N VT + +K+GWL D+NK+ ++ FYW LA
Sbjct: 513 VSTVNRVTSSNGSGTKEGWLGDNDLNKDRLDHFYWLLA 550
|
|
| TAIR|locus:2196739 NRT1:2 "AT1G69850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 96/230 (41%), Positives = 147/230 (63%)
Query: 298 CTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVI 357
CTV QVE+VKI+ +M+PI A TI++N CLAQL TFS+ Q A+M+ +GS+K+P +S+P+
Sbjct: 333 CTVQQVEDVKIVLKMLPIFACTIMLNCCLAQLSTFSVQQAASMNTKIGSLKIPPASLPIF 392
Query: 358 PLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNA 417
P++F+ IL P+Y+ +PFARK T +G+T LQR+G+GLVLS ++M VA LVE+ R+
Sbjct: 393 PVVFIMILAPIYDHLIIPFARKATKTETGVTHLQRIGVGLVLSILAMAVAALVEIKRKGV 452
Query: 418 FNET---PPKQ---ISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXX 471
++ K+ ++ W++ QY G AD+FT GLLE+F+ EAP+ M++LA
Sbjct: 453 AKDSGLLDSKETLPVTFLWIALQYLFLGSADLFTLAGLLEYFFTEAPSSMRSLATSLSWA 512
Query: 472 XXXXXXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
V I+N++T + WL GK IN+ ++ FYW + +
Sbjct: 513 SLAMGYYLSSVIVSIVNSITG--SSGNTPWLRGKSINRYKLDYFYWLMCV 560
|
|
| TAIR|locus:2181655 AT5G13400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 200/540 (37%), Positives = 291/540 (53%)
Query: 2 GDKVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF 61
G + N+ + GG+ A F+F E M + ++MV + MH +SN + NF
Sbjct: 56 GKPIANLSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSSNAVNNFL 115
Query: 62 GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPP--DCGKSSCL 119
G + ++GGF++D +L R+ T IF T+ ++ L+ +T+ A K P +CG+ S L
Sbjct: 116 GISQASSVLGGFLADAYLGRYWTIAIFTTMYLVGLIGITLGASLKMFVPDQSNCGQLSLL 175
Query: 120 KGAIAA-------YFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172
G Y Y LY+ FG G R + +FGA QFDE L +FNF+
Sbjct: 176 LGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDEKSKDYKTHLDRFFNFFY 235
Query: 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVR 232
L+ T+ A+I T +VYV E W + F +VA I AG LYR + PG SPL R
Sbjct: 236 LSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTR 295
Query: 233 VAQVLVVAIKNRKLSLPDNPE-ELYEINEKERASTWER-IPHANQFRCLDKAAI-MPKDS 289
VAQVLV A + R + + LYE+ + A R IPH+N F LDKAA+ + +D
Sbjct: 296 VAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSAINGSRKIPHSNDFIWLDKAALELKEDG 355
Query: 290 AVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKV 349
+PW++CTVTQVEEVKIL R++PI TI+++ L + T S+ Q ++ H+ +K+
Sbjct: 356 LEPSPWKLCTVTQVEEVKILIRLIPIPTCTIMLSLVLTEYLTLSVQQAYTLNTHIQHLKL 415
Query: 350 PTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGL 409
P + +PV P L + ++L LY FVP R+ITG+P G +QLQRVGIGL +S +S+ AGL
Sbjct: 416 PVTCMPVFPGLSIFLILSLYYSVFVPITRRITGNPHGASQLQRVGIGLAVSIISVAWAGL 475
Query: 410 VEVIRRN-------AFNE-TPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGM 461
E RR+ FN T ++ +WL QYC+ GIA++F +GLLEF Y+EAP M
Sbjct: 476 FENYRRHYAIQNGFEFNFLTQMPDLTAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAM 535
Query: 462 KTLAXXXXXXXXXXXXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
K++ +I+ A T R + K WL ++IN + YW L +
Sbjct: 536 KSIGSAYAALAGGLGCFAATILNNIVKAAT-RDSDGKS-WL-SQNINTGRFDCLYWLLTL 592
|
|
| TAIR|locus:2150124 PTR5 "peptide transporter 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 181/532 (34%), Positives = 294/532 (55%)
Query: 4 KVENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGS 63
K N + G ++AC F+ E + + +++ Y + +M+ + AS +++N+ G+
Sbjct: 19 KPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGT 78
Query: 64 TFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSC--LKG 121
+ L+G FI+D +L R+ T F + + + +LTI A L P C +C G
Sbjct: 79 CYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGL-TPTCSGETCHATAG 137
Query: 122 AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVI 181
A F +LYL + G GG + + +FGA QFD+ D K ++ +S+FN++ V A+I
Sbjct: 138 QTAITFI-ALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMI 196
Query: 182 GVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI 241
+ +V++ W G V +VA I ++ AG YR+Q+PG SPL R+ QV+V +
Sbjct: 197 ASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASC 256
Query: 242 KNRKLSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMP----KDSAVAAPWR 296
+ K+ +P++ LYE + E + R + H DKAA+ K +A ++ W+
Sbjct: 257 RKSKVKIPEDESLLYENQDAESSIIGSRKLEHTKILTFFDKAAVETESDNKGAAKSSSWK 316
Query: 297 VCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIP 355
+CTVTQVEE+K L R++PI A+ I+ + +Q+ T + QG +D H+G + K+P++S+
Sbjct: 317 LCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLS 376
Query: 356 VIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR- 414
+ L + P+Y+ VPFARK TGH G TQLQR+GIGLV+S SM AG++EV R
Sbjct: 377 LFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARL 436
Query: 415 -----RNAFNE-TPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXX 468
N +NE T P +++FW QY + G A++FTFIG LEFFY +AP M++L
Sbjct: 437 NYVQTHNLYNEETIP--MTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSAL 494
Query: 469 XXXXXXXXXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLA 520
V ++ VT+ + + GW+ K++N +++ F+W LA
Sbjct: 495 SLTAIAFGNYLSTFLVTLVTKVTR--SGGRPGWI-AKNLNNGHLDYFFWLLA 543
|
|
| TAIR|locus:2018032 PTR6 "peptide transporter 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 177/521 (33%), Positives = 284/521 (54%)
Query: 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLC 68
K+ G ++AC F+ E + + +++ Y+ +E+H A++ + + G+ ++
Sbjct: 51 KKTGNWKACPFILGNECCERLAYYGIAKNLITYYTSELHESNVSAASDVMIWQGTCYITP 110
Query: 69 LVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC-GKSS--CLKGAIAA 125
L+G I+D++ R+ T F + + + +LT+ A L P C G ++ C
Sbjct: 111 LIGAVIADSYWGRYWTIASFSAIYFIGMALLTLSASLPVLKPAACAGVAAALCSPATTVQ 170
Query: 126 Y--FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183
Y F+ LYL + G GG + + +FGA QFD+ DP+ AS+FN++ + + + I
Sbjct: 171 YAVFFTGLYLIALGTGGIKPCVSSFGADQFDDTDPRERVRKASFFNWFYFSINIGSFISS 230
Query: 184 TGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243
T +V+V W LGFL+ +V + + + G LYR Q+PG SP+ RV QVLV A +
Sbjct: 231 TLLVWVQENVGWGLGFLIPTVFMGVSIASFFIGTPLYRFQKPGGSPITRVCQVLVAAYRK 290
Query: 244 RKLSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMP----KDSAVAAPWRVC 298
KL+LP++ LYE EK R I H + ++ LDKAA++ K A + PW++C
Sbjct: 291 LKLNLPEDISFLYETREKNSMIAGSRKIQHTDGYKFLDKAAVISEYESKSGAFSNPWKLC 350
Query: 299 TVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIP 358
TVTQVEEVK L RM PI AS I+ + +Q+ T + QG +M+ + S ++P +S V
Sbjct: 351 TVTQVEEVKTLIRMFPIWASGIVYSVLYSQISTLFVQQGRSMNRIIRSFEIPPASFGVFD 410
Query: 359 LLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAF 418
L + I +P+Y+ F VPF R+ TG P G+T LQR+GIGL LS +S+ A +VE +R
Sbjct: 411 TLIVLISIPIYDRFLVPFVRRFTGIPKGLTDLQRMGIGLFLSVLSIAAAAIVETVRLQLA 470
Query: 419 NETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXXXXXX 478
+ +S+FW QY + GIA++F FIG +EFFY E+P M+++
Sbjct: 471 QDFVA--MSIFWQIPQYILMGIAEVFFFIGRVEFFYDESPDAMRSVCSALALLNTAVGSY 528
Query: 479 XXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFL 519
+ ++ T K GW+ D+NK +++ F+W L
Sbjct: 529 LSSLILTLVAYFTA--LGGKDGWVPD-DLNKGHLDYFFWLL 566
|
|
| TAIR|locus:2170683 AT5G62730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 183/523 (34%), Positives = 284/523 (54%)
Query: 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVG 71
GG A +FV V LEN+ F+AN ++VLY +M F +GA+N +T F G+ F L L+G
Sbjct: 58 GGMLAASFVLVVEVLENLAFLANASNLVLYLSTKMGFSPSGAANAVTAFMGTAFFLALLG 117
Query: 72 GFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSL 131
GF++D F + F L+ +E L L++LT+QA+ + P + + L
Sbjct: 118 GFLADAFFTTFHIYLVSAAIEFLGLMVLTVQAHEHSTEPWS-----------RVFLFVGL 166
Query: 132 YLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT 191
YL + G GG +G+LP GA QFDE G + + +FN+++ + + A+I VT +V++
Sbjct: 167 YLVALGVGGIKGSLPPHGAEQFDEETSSGRRQRSFFFNYFIFSLSCGALIAVTVVVWLED 226
Query: 192 EKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAI--KNRKLSLP 249
K W GF VS+ A I + AG +YR++ P SP+ + +VL A+ K +K
Sbjct: 227 NKGWSYGFGVSTAAILISVPVFLAGSRVYRLKVPSGSPITTLFKVLTAALYAKYKKRRTS 286
Query: 250 DNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKIL 309
+ N+ + + T + + F ++ + ++ P R CT QV++VKI+
Sbjct: 287 RIVVTCHTRNDCDDSVTKQNCDGDDGFLGSFLGEVVRERESLPRPLR-CTEEQVKDVKIV 345
Query: 310 TRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLY 369
+++PI STI++N CLAQL TFS+ Q + M+ LGS VP +++PV P++FM IL P Y
Sbjct: 346 IKILPIFMSTIMLNCCLAQLSTFSVQQASTMNTKLGSFTVPPAALPVFPVVFMMILAPTY 405
Query: 370 EFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAF-----NE---- 420
+P ARK T +GIT LQR+G GLVLS V+M VA LVE R++ N
Sbjct: 406 NHLLLPLARKSTKTETGITHLQRIGTGLVLSIVAMAVAALVETKRKHVVVSCCSNNNSSS 465
Query: 421 --TPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXXXXXX 478
+ P I+ W++ QY G AD+FT G++EFF+ EAP+ M++LA
Sbjct: 466 YSSSPLPITFLWVAIQYVFLGSADLFTLAGMMEFFFTEAPSTMRSLATSLSWASLAMGYY 525
Query: 479 XXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAI 521
V +N VT WL G+++N+ ++ FYW + +
Sbjct: 526 FSSVLVSAVNFVTG--LNHHNPWLLGENLNQYHLERFYWLMCV 566
|
|
| TAIR|locus:2080235 PTR1 "peptide transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 173/526 (32%), Positives = 292/526 (55%)
Query: 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFL 66
N ++ G ++AC F+ E + + G ++V Y ++ ++ A A+N +TN+ G+ ++
Sbjct: 21 NKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYI 80
Query: 67 LCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAI-AA 125
L+G FI+D +L R+ T F + V + +LT+ A L P +C +C + A
Sbjct: 81 TPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQTA 140
Query: 126 YFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185
F+ +LY+ + G GG + + +FGA QFDEND +S+FN++ + V A+I T
Sbjct: 141 VFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATV 200
Query: 186 IVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRK 245
+V++ W GF V +VA I + G YR+Q+PG SPL R+ QV+V A +
Sbjct: 201 LVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKIS 260
Query: 246 LSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMPKDSAV----AAPWRVCTV 300
+ +P++ L+E + E R + H + + DKAA+ + ++ PWR+C+V
Sbjct: 261 VKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSV 320
Query: 301 TQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLG-SIKVPTSSIPVIPL 359
TQVEE+K + ++P+ A+ I+ T +Q+ T + QG MD H+G + ++P++S+ +
Sbjct: 321 TQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDT 380
Query: 360 LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRN--- 416
+ + P+Y+ F +P ARK T + G TQLQR+GIGLV+S +M AG++EV+R +
Sbjct: 381 VSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVK 440
Query: 417 AFNETPPKQI--SLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXXXXXX 474
N KQI S+FW QY + G A++FTFIG LEFFY +AP M++L
Sbjct: 441 THNAYDQKQIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVA 500
Query: 475 XXXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLA 520
V ++ +TK+ K GW+ ++N+ +++ F++ LA
Sbjct: 501 LGNYLSTVLVTVVMKITKK--NGKPGWIPD-NLNRGHLDYFFYLLA 543
|
|
| TAIR|locus:2041125 PTR2 "peptide transporter 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 174/530 (32%), Positives = 289/530 (54%)
Query: 8 IKQK-GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFL 66
+K+K G ++AC F+ E + + +++ Y ++H A+ +T + G+ +L
Sbjct: 38 LKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYL 97
Query: 67 LCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAY 126
L+G ++D + R+ T F + + + LT+ A L P +C C A Y
Sbjct: 98 TPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGDFCPSATPAQY 157
Query: 127 --FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184
F+G LYL + G GG + + +FGA QFD+ D + AS+FN++ + + A++ +
Sbjct: 158 AMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSS 217
Query: 185 GIVYVFTEKSWWLGFLVSSVANFIGLIALAA---GKCLYRIQQPGESPLVRVAQVLVVAI 241
+V++ + W LGF + +V F+GL A+A+ G LYR Q+PG SP+ R++QV+V +
Sbjct: 218 LLVWIQENRGWGLGFGIPTV--FMGL-AIASFFFGTPLYRFQKPGGSPITRISQVVVASF 274
Query: 242 KNRKLSLPDNPEELYEINEKERASTWER-IPHANQFRCLDKAAIMPKDSAVAAP----WR 296
+ + +P++ LYE +K A R I H + + LDKAA++ ++ + + WR
Sbjct: 275 RKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEESKSGDYSNSWR 334
Query: 297 VCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPV 356
+CTVTQVEE+KIL RM PI AS I+ + AQ+ T + QG AM+ +GS ++P +++
Sbjct: 335 LCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGT 394
Query: 357 IPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRN 416
+ I +PLY+ F VP ARK TG G T++QR+GIGL +S + M A +VE+IR +
Sbjct: 395 FDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLH 454
Query: 417 AFNET------PPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLAXXXXX 470
N+ P IS+ W QY I G A++F FIG LEFFY ++P M++L
Sbjct: 455 MANDLGLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALAL 514
Query: 471 XXXXXXXXXXXAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLA 520
+ ++ T R ++GW+ ++N +++ F+W LA
Sbjct: 515 LTNALGNYLSSLILTLVTYFTTR--NGQEGWI-SDNLNSGHLDYFFWLLA 561
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q93VV5 | PTR16_ARATH | No assigned EC number | 0.4264 | 0.8844 | 0.8934 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 597 | |||
| pfam00854 | 372 | pfam00854, PTR2, POT family | 1e-46 | |
| TIGR00926 | 641 | TIGR00926, 2A1704, Peptide:H+ symporter (also tran | 9e-16 | |
| COG3104 | 498 | COG3104, PTR2, Dipeptide/tripeptide permease [Amin | 1e-08 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 0.001 |
| >gnl|CDD|216153 pfam00854, PTR2, POT family | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 1e-46
Identities = 99/397 (24%), Positives = 158/397 (39%), Gaps = 38/397 (9%)
Query: 82 FATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGN 141
F T L+ + + V+LT+ A PP L A FY LYL + G GG
Sbjct: 1 FKTILLGSIIYAIGHVLLTLGAI-----PPS------LSPVQVALFYIGLYLIALGTGGI 49
Query: 142 RGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLV 201
+ + AFGA QFDE +F+++ + ++I Y+ + LGF +
Sbjct: 50 KPNVSAFGADQFDETQDP---RRDGFFSWFYFSINAGSLIATIITPYLQQNVGYPLGFGL 106
Query: 202 SSVANFIGLIALAAGKCLYRIQQPGES--PLVRVAQVLVVAIKNRKLSLPDNPEELYEIN 259
+V + L+ G Y+ + P V +A ++ A KNRKL LP + LY
Sbjct: 107 PAVGMLLALLVFLLGSRRYKKKAPPGGSPFTVCIAFIITAAGKNRKLQLPKDSHWLYWAL 166
Query: 260 EKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILAST 319
EK + + + + V ++ + M+PI A
Sbjct: 167 EKYNKRSISQTKVHTRVAVIFIPLPKFWALF-------DQQGSVWLLQAILLMLPIWAFW 219
Query: 320 ILMNTCLAQLQTFSITQGAAMDPHLGS-IKVPTSSIPVIPLLFMSILLPLYEFFFVPFAR 378
IL + QL T + Q MD + ++P +S L + ILLP+ +F P R
Sbjct: 220 ILPDQMWTQLATLIVRQVPTMDRIIYPLFEIPPASFQSFNPLAVLILLPILDFLVYPLLR 279
Query: 379 KITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRR---NAFNETPPKQ---ISLFWLS 432
G+T QR G+G+ + V+ +A +VE R A T P + + W
Sbjct: 280 ----LKRGLTLPQRFGLGMFILIVANFLAAIVEAKRPRYAAALGLTSPGWTVPLFILWSL 335
Query: 433 FQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFT 469
+ I G+ G LEF P+ M +L + +
Sbjct: 336 PELFISGVG----LAGALEFAPDALPSSMMSLWTLLS 368
|
The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters. Length = 372 |
| >gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 9e-16
Identities = 84/406 (20%), Positives = 156/406 (38%), Gaps = 60/406 (14%)
Query: 38 MVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97
+VLY N + ++ A+N F +L L+G I+D++L +F T L + V+
Sbjct: 10 LVLYLLNFLGWNEDTATNIYHTFTYLCYLTPLIGALIADSWLGKFKTILYLSLVYVVGHA 69
Query: 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND 157
+ ++ A HP + L G + G G P A D+ +
Sbjct: 70 LASLGAVPSLGHPLH--DALSLVG------------LALIALGTGGIKPCVSAFGGDQFE 115
Query: 158 PKGAKALASYFNFYLLATTVAAVIGVT------GIVYVFTEKS-WWLGFLVSSVANFIGL 210
+ +F+F+ A ++ G V F + + L F V + + L
Sbjct: 116 ERQLSLRFRFFSFFYFAINAGSLFSTIITPILRGDVGCFGCQDCFPLAFGVPGILMTLAL 175
Query: 211 IALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERI 270
I + G +Y+ + P + + +V + +V A+K R + R+ W R+
Sbjct: 176 IVFSMGSKMYKKKPPVGNIVSKVMKCIVFALKKR---------------FRTRSEDWPRL 220
Query: 271 PHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQ 330
LD AA PK R+ + K L R++ + + Q
Sbjct: 221 HW------LDWAA--PK-----YLIRM-----IRSTKRLLRVLFLFIPLPMFWALFDQQG 262
Query: 331 TFSITQGAAMDPHLGSIKVPTSSIPVI-PLLFMSILLPLYEFFFVPFARKITGHPSGITQ 389
+ Q MD +G + + + PLL + IL+P++++ P K + T
Sbjct: 263 SRWTLQATRMDGDVGLFPIQPDQMQAVNPLLVL-ILVPIFDYVVYPALAKCG---TRFTS 318
Query: 390 LQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQY 435
L+++ +G++L+A++ VA L++ E P I F
Sbjct: 319 LRKMAVGMLLAALAFAVAALLQNKINPTLPEEPSASII-FLQVLNT 363
|
[Transport and binding proteins, Amino acids, peptides and amines]. Length = 641 |
| >gnl|CDD|225646 COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-08
Identities = 70/448 (15%), Positives = 150/448 (33%), Gaps = 48/448 (10%)
Query: 38 MVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97
+ + + FD A+ + + +L ++GG+++D L T ++ L + +
Sbjct: 48 LYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHL 107
Query: 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND 157
+L I G Y L L G G + + + + ++D
Sbjct: 108 VLAI--------SSVSGPGG---------LYIGLALIIVGTGLFKPNISSLLGELYPKDD 150
Query: 158 PKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG- 216
P+ F + + + ++I + W +GF +++V IGL+ G
Sbjct: 151 PRRDGG----FTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206
Query: 217 KCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQF 276
+ + I + + +L V + L L N I A +
Sbjct: 207 RHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIY 266
Query: 277 RCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQ 336
+A PK +E + L +P+ ++ Q+ +
Sbjct: 267 --FAEAFRSPKVF--------------DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLY 310
Query: 337 GAAM-DPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGI 395
+ + +VP + + F+ + P+ + R PS + +
Sbjct: 311 ADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRG-NKQPSTPIKF---AL 366
Query: 396 GLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYK 455
GL+L+ + + L + P +S++WL Y + ++F L K
Sbjct: 367 GLILAGLGFLILLLAGIWFGG-----PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK 421
Query: 456 EAPAGMKTLASSFTYLSLSFGYFLSSAF 483
AP +K+ + +L+++ G L
Sbjct: 422 LAPPALKSFIMAMWFLTVAAGQTLGGQV 449
|
Length = 498 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 34/201 (16%), Positives = 61/201 (30%), Gaps = 25/201 (12%)
Query: 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGF 73
R + + L + G+ + LY + + A A L+ F L L+GG
Sbjct: 174 LRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233
Query: 74 ISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYL 133
+SD R LI L L L++L + A +L L
Sbjct: 234 LSDRLGRRRLLLLIGLLLAALGLLLLAL-------------------APSLALLLVALLL 274
Query: 134 YSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEK 193
FG G L + +A + + ++ +G +
Sbjct: 275 LGFGLGFAFPALLTLASELA------PPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328
Query: 194 SWWLGFLVSSVANFIGLIALA 214
+ FL+ + + + L
Sbjct: 329 GYGGVFLILAALALLAALLLL 349
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 597 | |||
| KOG1237 | 571 | consensus H+/oligopeptide symporter [Amino acid tr | 100.0 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 100.0 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 100.0 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 100.0 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 100.0 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 100.0 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 100.0 | |
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 99.97 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 99.97 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 99.96 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 99.96 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.95 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.95 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.94 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.93 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.93 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.93 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.93 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.93 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.93 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 99.93 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.92 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 99.92 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 99.92 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.92 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.92 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 99.92 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.92 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.91 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.91 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.91 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 99.91 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.91 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.91 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.91 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.91 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.91 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.9 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.9 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.9 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 99.9 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.9 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.9 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.9 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 99.9 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.9 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.89 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.89 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.89 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.89 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.89 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.89 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 99.89 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.89 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.89 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 99.89 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.89 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.88 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.88 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.88 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.88 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.88 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 99.87 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.87 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.87 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.86 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.86 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.86 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.85 | |
| PRK11043 | 401 | putative transporter; Provisional | 99.85 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 99.84 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 99.84 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.84 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.84 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.84 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.84 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.83 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.83 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 99.83 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.83 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.82 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 99.82 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 99.82 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.82 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 99.82 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 99.82 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.8 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 99.8 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.79 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.79 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 99.78 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 99.78 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.75 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 99.74 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.72 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.72 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 99.71 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.7 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.7 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 99.69 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 99.68 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 99.68 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 99.64 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 99.64 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.63 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.62 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.62 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.61 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 99.6 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 99.59 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.55 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 99.54 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 99.51 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.5 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.42 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 99.4 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.39 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.35 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.33 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.32 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.32 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 99.31 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.3 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.29 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.28 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 99.27 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 99.26 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.26 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.25 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 99.25 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.24 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.23 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.21 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.21 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.2 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.2 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.19 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.19 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.19 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.18 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.17 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.17 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.17 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.17 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.17 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.16 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 99.16 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.14 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 99.1 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.1 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 99.1 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.1 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.09 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.09 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.07 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.06 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.06 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 99.04 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.03 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.0 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.0 | |
| KOG3626 | 735 | consensus Organic anion transporter [Secondary met | 98.99 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 98.99 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 98.98 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 98.98 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 98.98 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 98.97 | |
| PRK10504 | 471 | putative transporter; Provisional | 98.97 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 98.96 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 98.96 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 98.94 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 98.93 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 98.93 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 98.92 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 98.92 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 98.92 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 98.92 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 98.92 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 98.92 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 98.89 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 98.89 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 98.88 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 98.88 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 98.87 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 98.85 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 98.84 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 98.84 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 98.84 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 98.83 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 98.82 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 98.82 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 98.8 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 98.8 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 98.79 | |
| PRK10054 | 395 | putative transporter; Provisional | 98.79 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 98.79 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 98.77 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 98.75 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 98.73 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 98.73 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 98.67 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 98.65 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 98.64 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 98.64 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 98.62 | |
| PRK11043 | 401 | putative transporter; Provisional | 98.6 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 98.59 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 98.58 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 98.56 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 98.56 | |
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 98.55 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 98.52 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 98.52 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 98.48 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 98.47 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 98.45 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 98.4 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 98.37 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 98.36 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 98.36 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 98.35 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 98.32 | |
| PRK11462 | 460 | putative transporter; Provisional | 98.26 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 98.25 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 98.25 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 98.16 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 98.08 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 98.07 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 98.07 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 98.05 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 98.04 | |
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 98.03 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 98.03 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 97.98 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 97.88 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 97.88 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 97.81 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 97.79 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 97.78 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 97.76 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 97.74 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 97.74 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 97.74 | |
| KOG3574 | 510 | consensus Acetyl-CoA transporter [Inorganic ion tr | 97.71 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 97.65 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 97.57 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 97.54 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 97.47 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 97.47 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 97.46 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 97.46 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 97.24 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 97.14 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 96.94 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 96.76 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 96.74 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 96.59 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 96.56 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 96.51 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 96.47 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 96.34 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 96.33 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 96.22 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 95.41 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 95.27 | |
| KOG3810 | 433 | consensus Micronutrient transporters (folate trans | 95.23 | |
| KOG3626 | 735 | consensus Organic anion transporter [Secondary met | 95.14 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 94.94 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 93.54 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 93.24 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 91.98 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 91.33 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 90.93 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 90.67 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 90.39 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 90.13 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 89.79 | |
| KOG1479 | 406 | consensus Nucleoside transporter [Nucleotide trans | 89.07 | |
| KOG3097 | 390 | consensus Predicted membrane protein [Function unk | 88.7 | |
| KOG3880 | 409 | consensus Predicted small molecule transporter inv | 88.54 | |
| PF03219 | 491 | TLC: TLC ATP/ADP transporter; InterPro: IPR004667 | 88.26 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 88.15 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 86.13 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 85.04 |
| >KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-49 Score=426.17 Aligned_cols=524 Identities=40% Similarity=0.688 Sum_probs=467.3
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHH
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~ 89 (597)
+++.|+++.+++..+.+|++++||+..++..|++.++|.+...+...++.|.+.+.+.++++++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCC----CCCCcCC--chhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhh
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDC----GKSSCLK--GAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKA 163 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~ 163 (597)
++..+|..+++++...+.+.++.| ..++|+. ..+...++.++.+..+|.|+.+|+..++.+||+++..|+++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999999999888775 4456775 3467889999999999999999999999999999888877877
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHh
Q 007582 164 LASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243 (597)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (597)
+.++++|+|+..++|..++..+..|++++.+|.+.|.++.+++.+++++++.+.+.|.+.+|.+++...+.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCC----CCCCCccccccchhHHHHHHHhHhhHHHHH
Q 007582 244 RKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDS----AVAAPWRVCTVTQVEEVKILTRMMPILAST 319 (597)
Q Consensus 244 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 319 (597)
++...+..++++ +... +. ....+..++.+++|+++++.+.+ ....+|+.++.+++|+.|.+++.++++...
T Consensus 272 ~~~~~~~~~~~~-~~~~-~~---~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 272 RKAVVSLDPEEL-YYDC-TD---SVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HhccCCCcchhc-cccc-cc---cccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 877766654443 1000 00 01222356778899888776643 234679999999999999999999999999
Q ss_pred HHhHhhhcccchhHHhhhhhcCCCCCc-ccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHH
Q 007582 320 ILMNTCLAQLQTFSITQGAAMDPHLGS-IKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLV 398 (597)
Q Consensus 320 ~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~ 398 (597)
.++++.+.|+.+.++.|+..+++..+. +.++++.++++..+..++..|+.||+..|+.||...++.+.+.++|+.+|++
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 999999999999999999999998876 8999999999999999999999999999999999887778999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccC--CCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHH
Q 007582 399 LSAVSMTVAGLVEVIRRNAFNE--TPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFG 476 (597)
Q Consensus 399 ~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~ 476 (597)
+..++|..++..+.++.+...+ +..++++++|++++|+++|++|++..+...||.++++|++||+.+++++.++.++|
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G 506 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVG 506 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877654 22357999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCCcc-CCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccCC
Q 007582 477 YFLSSAFVDIINAVTKRITPSKQGWLH-GKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPEN 543 (597)
Q Consensus 477 ~~i~~~~~~~i~~~~~~~~~~~~gw~~-~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e 543 (597)
+.+++.+..++...+. ...+|.. + ++|..+++++|++++.++.++.+.+.++.++++.+..+
T Consensus 507 ~~lss~Lv~~v~~~t~----~~~~w~~~~-~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 507 NYLSSVLVSLVQFSTG----KAAEWLGFA-NLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHhcC----CCcccCChh-HhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999988876441 0237998 5 99999999999999999999999888888888776643
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=348.53 Aligned_cols=461 Identities=15% Similarity=0.239 Sum_probs=354.3
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccC----CchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMH----FDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFAT 84 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~----~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~ 84 (597)
+.-+|||.++.+...|++|||+|||+...+..|+..+++ +|++++..+.+.|..-.++.+++|||++||++|+|++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 446699999999999999999999999999999998888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh
Q 007582 85 CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL 164 (597)
Q Consensus 85 i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r 164 (597)
+++|.+++.+|.++++.+.. .....++++.+++++|.|+++|++.++++|++|+++|| |
T Consensus 95 I~lGail~~iGh~~L~~~~~-----------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----r 153 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSV-----------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----R 153 (498)
T ss_pred HHHHHHHHHHHHHHHhcccc-----------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----c
Confidence 99999999999999998730 13457999999999999999999999999999999876 8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCC--CChh-----H----HH
Q 007582 165 ASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPG--ESPL-----V----RV 233 (597)
Q Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~----~~ 233 (597)
...++++|+++|+|+.++|.+.+++.+++||...|.+..+-+.++++.+..+++.+...+.. ..+. . .+
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGL 233 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999998888887766544322 1111 0 00
Q ss_pred HHHHHHHH-HhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhH
Q 007582 234 AQVLVVAI-KNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRM 312 (597)
Q Consensus 234 ~~~~~~~~-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (597)
...+..+. ..... ..++....... ... ...-+.. ... +| .+.+ ++|||++..
T Consensus 234 ~~~~~~~~~~~~l~-----~~~~~~~~~~~------~i~--~~~~~~~---~~~-------~~---~~~~-~er~r~~~~ 286 (498)
T COG3104 234 VVMILAALLTLLLN-----QNTFSGVLLVI------SIL--IAIIYFA---EAF-------RS---PKVF-DERRRLLAA 286 (498)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHH------HHH--HHHHHHH---HHh-------cc---CccH-HHHHHHHHH
Confidence 00011110 00000 00000000000 000 0000000 000 00 1123 678999999
Q ss_pred hhHHHHHHHhHhhhcccchhHHhhhhhcCC-CCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchH
Q 007582 313 MPILASTILMNTCLAQLQTFSITQGAAMDP-HLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQ 391 (597)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~ 391 (597)
+.+++...++|+.+.|+++.+..+.....+ +..|+.+++++++.+|++.+++++|+.+++.+|++++.. ..+.+.
T Consensus 287 ~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~----~ps~~~ 362 (498)
T COG3104 287 IPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNK----QPSTPI 362 (498)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC----CCCcch
Confidence 999999999999999999988888754433 434578999999999999999999999999999887752 268899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHH
Q 007582 392 RVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL 471 (597)
Q Consensus 392 ~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~ 471 (597)
++.+|+++++++++++........ .+ ....+.+|+++.|++++++|.+.+|...+++.+.+|+++.+..+|.+.+
T Consensus 363 KFalGl~l~g~~fl~l~~~~~~~~---~~--~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfL 437 (498)
T COG3104 363 KFALGLILAGLGFLILLLAGIWFG---GP--SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFL 437 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc---CC--CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 999999999999998877632211 10 1357899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007582 472 SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKY 539 (597)
Q Consensus 472 ~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 539 (597)
++..++.++..+.+.... +.. ..+......+|+..++..++..++...+.|+.++
T Consensus 438 t~a~~~~l~g~va~~~~~-~~~------------~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 438 TVAAGQTLGGQVAGLTAV-TDP------------AYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred HHHHHHHhhceecccccc-cch------------hhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 999999998887763211 000 0111223446888888877777776666665443
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=343.18 Aligned_cols=468 Identities=11% Similarity=0.154 Sum_probs=339.2
Q ss_pred ccchhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHH
Q 007582 5 VENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFAT 84 (597)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~ 84 (597)
..+.+.++|||.++.+++.+++||++||++.+++..|+++++|++..+++++.+.|....++.++++|+++||++||||+
T Consensus 4 ~~~~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~ 83 (489)
T PRK10207 4 TAPMGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT 83 (489)
T ss_pred CCCcchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999997799999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh
Q 007582 85 CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL 164 (597)
Q Consensus 85 i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r 164 (597)
++++.+++.+|+++++++.+. ...++++|+++|+|.|+..|+..++++|++|++++ +|
T Consensus 84 ~~~g~~~~~~g~~~~~~~~~~------------------~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~ 141 (489)
T PRK10207 84 IVLGAIVLAIGYFMTGMSLLK------------------PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RL 141 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccc------------------hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hh
Confidence 999999999999999987531 22466899999999999999999999999997652 26
Q ss_pred hhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeec--CCCCChhH--HHHHH----
Q 007582 165 ASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQ--QPGESPLV--RVAQV---- 236 (597)
Q Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~---- 236 (597)
++.++++|+++|+|+.+||.+++++.++.|||+.|+++.+..++.++.+...++.+.+. +|++++.+ .....
T Consensus 142 ~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~ 221 (489)
T PRK10207 142 DGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS 221 (489)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH
Confidence 88999999999999999999999999999999999997766666665555555444332 22222211 11100
Q ss_pred --HHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhh
Q 007582 237 --LVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMP 314 (597)
Q Consensus 237 --~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (597)
+......... ................ ...+..+. .+.+ ..+++|.+....
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~-----------~~~f~~~~---------------~~~~-~~~r~r~~~~~~ 273 (489)
T PRK10207 222 VVMIFVCAWLMH-NVEVANLVLIVLSIVV-----------TIIFFREA---------------FKLD-KTGRNKMFVAFV 273 (489)
T ss_pred HHHHHHHHHHHh-hhhHHHHHHHHHHHHH-----------HHHHHHHH---------------hcCC-HHHHHHHHHHHH
Confidence 0000000000 0000000000000000 00000000 0011 123455666666
Q ss_pred HHHHHHHhHhhhcccchhHHhhhh-hcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHH
Q 007582 315 ILASTILMNTCLAQLQTFSITQGA-AMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRV 393 (597)
Q Consensus 315 l~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~ 393 (597)
++....+++..+.|..+....+.. ..+....++..+++.++.+|++.+++..|+.+++.+++++|.. ..++..++
T Consensus 274 l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~----~~~~~~k~ 349 (489)
T PRK10207 274 LMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK----DLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC----CCCcHHHH
Confidence 677788889999888776666554 3444455667788889999999999999999998888777653 25899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHH
Q 007582 394 GIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSL 473 (597)
Q Consensus 394 ~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~ 473 (597)
.+|+++++++++.++...... ...+ ...+.+|+++.+++.+++|.+.+|+.++++.+.+|++++|.++|++++.+
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~---~~~~--~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~ 424 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWF---ADAQ--GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQ 424 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 999999999987765432111 1111 13577889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007582 474 SFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYK 540 (597)
Q Consensus 474 ~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 540 (597)
.+|+.++..+........ + ...+ ....+.+.++|..+++.++++.++++++.|+.++.
T Consensus 425 ~ig~~lg~~l~~~~~~~~-----~--~~~~--~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 425 AAAFLLGGYVATFTAVPD-----N--ITDP--LETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHhcccc-----c--cccc--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988886542100 0 0000 00112356688888888888888877777766554
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=326.02 Aligned_cols=454 Identities=14% Similarity=0.171 Sum_probs=332.5
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccc--cCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNE--MHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~--l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
+..++||.++.+++.+++||+++|++.++++.|++++ +|++..+++.+.+.+.++..++++++|+++||++|||+++.
T Consensus 4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 4467999999999999999999999999999999987 99999999999999999999999999999999669999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
++.++..++.++++++. +...++++|++.|+|.|+..|+..++++|++|++++ .+|++
T Consensus 84 ~~~~~~~~g~~~~~~~~-------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~~ 141 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI-------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRDG 141 (475)
T ss_pred HHHHHHHHHHHHHHhcc-------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccccc
Confidence 99999999999888764 344688899999999999999999999999986552 23888
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhH----H-HH--HHHHH
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLV----R-VA--QVLVV 239 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~--~~~~~ 239 (597)
.++++|++.|+|.++||.+++++.++.+|++.|.++++..+++.+.++...+.+++.++++++.. + .. ..++.
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLA 221 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHH
Confidence 99999999999999999999999888899999999887766666666655554433322221110 0 00 00000
Q ss_pred ----HHHhc-CCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhh
Q 007582 240 ----AIKNR-KLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMP 314 (597)
Q Consensus 240 ----~~~~~-~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (597)
..+.. .............. .... ...+.... .. .+ ..+..++++....+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~~~~~~~~-~~-------~~-----~~~~~~~~~~~~~l~ 276 (475)
T TIGR00924 222 ALALVFFCAWLMHHVVIANILLMT---VTLA---------VIIFFFRL-AF-------KP-----RLDAVARNKMYAYIV 276 (475)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHH---HHHH---------HHHHHHHH-HH-------hc-----cCCHHHHhHHHHHHH
Confidence 00000 00000000000000 0000 00000000 00 00 011123444455677
Q ss_pred HHHHHHHhHhhhcccchhHHhh-hhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHH
Q 007582 315 ILASTILMNTCLAQLQTFSITQ-GAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRV 393 (597)
Q Consensus 315 l~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~ 393 (597)
+++...++++.+.|..+.+..+ ...++.+.+++.++++.++.+|++.++++.|+.+++..++.||.. +.+...|+
T Consensus 277 l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~----~~~~~~k~ 352 (475)
T TIGR00924 277 LFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK----DPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC----CCCcHHHH
Confidence 8888889999999988865543 344556666678889999999999999999999887655565522 35778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHH
Q 007582 394 GIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSL 473 (597)
Q Consensus 394 ~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~ 473 (597)
.+|+++.++++..+++... .... ..+.+.+|+++++++.+++|.+..|..++++++++|++.||+++|++.+..
T Consensus 353 ~~G~~l~~~~~~~~~~~~~----~~~~--~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~ 426 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIW----FADA--GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQ 426 (475)
T ss_pred HHHHHHHHHHHHHHHHHHh----hcCC--CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999988876521 1111 124788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 007582 474 SFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYK 538 (597)
Q Consensus 474 ~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~ 538 (597)
.+|+.+++.+....... .+...+|...++++++..++++++.|..+
T Consensus 427 ~~g~~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 427 AMGSLLGGYLATFGAVP-------------------QGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHhcc-------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887754321 11234577777777777777777666543
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=314.47 Aligned_cols=420 Identities=16% Similarity=0.214 Sum_probs=312.6
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
|+.+|||.++.+++.+++|++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||+++++
T Consensus 3 ~~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 3 KHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999933999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..+|.++++.... +...++++..+.++|.|...++.+++++|++|+++++ |.+.+
T Consensus 83 ~il~~lg~lll~~~~~------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf 140 (493)
T PRK15462 83 ALLMAIGHVVLGASEI------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGF 140 (493)
T ss_pred HHHHHHHHHHHHHhhc------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----cccee
Confidence 9999999877664321 1223556666777888999999999999999976532 88999
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCC-CCChhH--HHHH-----HHHH-
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQP-GESPLV--RVAQ-----VLVV- 239 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-----~~~~- 239 (597)
+++|...|+|+.++|.+++++.+.+||++.|.++++.++++++.++..++.+.+..+ +.++.. +... +...
T Consensus 141 ~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (493)
T PRK15462 141 SLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLL 220 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHH
Confidence 999999999999999999999888999999999887777777766666655433211 111111 0000 0000
Q ss_pred ----HHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhH
Q 007582 240 ----AIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPI 315 (597)
Q Consensus 240 ----~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 315 (597)
.+......... ...+.-... . . ...++-. . .. ...+.++|||+...+.+
T Consensus 221 ~~~~~~~~~~~~~~~-~~~~~~~~~----~----~----~~~~~~~--~-~~-----------~~~~~~er~r~~~~~~l 273 (493)
T PRK15462 221 VATPALITVLFWKEW-SVYALIVAT----I----I----GLGVLAK--I-YR-----------KAENQKQRKELGLIVTL 273 (493)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHH----H----H----HHHHHHH--H-HH-----------hcCCHHHHhhHHHHHHH
Confidence 00000000000 000000000 0 0 0000000 0 00 00123568888889999
Q ss_pred HHHHHHhHhhhcccchhHHhhh-hhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHH
Q 007582 316 LASTILMNTCLAQLQTFSITQG-AAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVG 394 (597)
Q Consensus 316 ~~~~~~~~~~~~~~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~ 394 (597)
++...++|+.+.|.++...... ...|+++.++.+++.+++.+|++.+++++|+..++..++.||.. .++.+.|+.
T Consensus 274 ~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~----~~s~~~Kfa 349 (493)
T PRK15462 274 TFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR----TVRIWGKFA 349 (493)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC----CCCcHHHHH
Confidence 9999999999999998776554 45566777888999999999999999999999988666543321 358999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHH-
Q 007582 395 IGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSL- 473 (597)
Q Consensus 395 ~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~- 473 (597)
+|+++++++++++.+.... ...++ ..+.+|++..|++.++||.+.+|...+.+.+.+|++.||..||++.+..
T Consensus 350 ~g~~~~g~~f~~l~~~~~~----~~~~~--~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~ 423 (493)
T PRK15462 350 LGLGLMSAGFCILTLSARW----SAMYG--HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSG 423 (493)
T ss_pred HHHHHHHHHHHHHHHHHhh----cCCCC--CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 9999999999888765321 11111 3688899999999999999999999999999999999999999998754
Q ss_pred HHHHHHHHHHHHHH
Q 007582 474 SFGYFLSSAFVDII 487 (597)
Q Consensus 474 ~l~~~i~~~~~~~i 487 (597)
.+++.+++.+....
T Consensus 424 ~~~~~~~g~~~~~~ 437 (493)
T PRK15462 424 AIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHh
Confidence 68888887776654
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=318.59 Aligned_cols=461 Identities=13% Similarity=0.193 Sum_probs=328.9
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
+..++||.++.+++.+++||+++|++.++++.|+++++|++..+++++.+.+.......++++|+++||++|||++++++
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999988888888889999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..+|.++++++.. ....++++|+++|+|.|...++..++++|++|++++ +|++.+
T Consensus 95 ~~~~~ig~~l~~~~~~------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~ 152 (500)
T PRK09584 95 AIVLAIGYALVAWSGH------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAF 152 (500)
T ss_pred HHHHHHHHHHHHHhcc------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcc
Confidence 9999999988887631 234677899999999999999999999999986542 256789
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeec--CCCCChhH--HH----HHHHHHH
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQ--QPGESPLV--RV----AQVLVVA 240 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~----~~~~~~~ 240 (597)
+++|++.|+|+.++|.+++++.+++|||+.|.++.+..+++++.++...+.+++. +++.++.. +. .......
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALI 232 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence 9999999999999999999999889999999998877666665555444333322 12211111 10 0010000
Q ss_pred -HHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHH
Q 007582 241 -IKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILAST 319 (597)
Q Consensus 241 -~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 319 (597)
........++........... ....+..... + ..+..++++.+..+.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~ 285 (500)
T PRK09584 233 AIATWLLHNQEIARMALGVVAL--------------GIVVIFGKEA------------F-AMKGAARRKMIVAFILMLEA 285 (500)
T ss_pred HHHHHHHhcchHHHHHHHHHHH--------------HHHHHHHHHH------------h-hcCHHHHHHHHHHHHHHHHH
Confidence 000000001000000000000 0000000000 0 01123455666667777888
Q ss_pred HHhHhhhcccchhHHhhhhh-cCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHH
Q 007582 320 ILMNTCLAQLQTFSITQGAA-MDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLV 398 (597)
Q Consensus 320 ~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~ 398 (597)
.++|+.+.|.++.+..+..+ .+.+..++..++++++.+|++.+++.+|+.+++..++++| .+..+++.+|++
T Consensus 286 i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~~ 358 (500)
T PRK09584 286 IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGMV 358 (500)
T ss_pred HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHHH
Confidence 88999999998887776543 4445556677889999999999999999998875555444 357789999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHH
Q 007582 399 LSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYF 478 (597)
Q Consensus 399 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~ 478 (597)
+++++++.+.+.... .+++ ...+.+|+++.+++.+++|++.+|...+++.+.+|+++||+++|++.+...+++.
T Consensus 359 l~~l~f~~l~~~~~~----~~~~--~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~ 432 (500)
T PRK09584 359 LCSGAFLVLPLGAKF----ANDA--GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAL 432 (500)
T ss_pred HHHHHHHHHHHHHHh----cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999988765321 1111 2467789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007582 479 LSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYK 540 (597)
Q Consensus 479 i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 540 (597)
++..+......- +. ..+......++..+|..+++++++..++.+...|+.++.
T Consensus 433 ~~g~~~~~~~~~-----~~----~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 433 IAGYVANLMAVP-----DN----VTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHhccc-----cc----cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877543210 00 000000112356778888888877777666666665544
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=289.36 Aligned_cols=333 Identities=23% Similarity=0.378 Sum_probs=273.4
Q ss_pred HHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007582 29 MGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNL 108 (597)
Q Consensus 29 ~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~ 108 (597)
++|||+.+++..|+.+.+|++.+++..+.+.|...+.+.++++|+++|+++||++++.++.++..+|.++++++...+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998876432111
Q ss_pred CCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhee
Q 007582 109 HPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVY 188 (597)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 188 (597)
. .......+++..+.++|.|+++|+..++++|++++++ +++|.++++++|+++|+|+++++++.++
T Consensus 81 ~-----------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 81 H-----------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred c-----------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1234457889999999999999999999999998654 3458999999999999999999999888
Q ss_pred eecc-------cchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhh
Q 007582 189 VFTE-------KSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEK 261 (597)
Q Consensus 189 ~~~~-------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~ 261 (597)
+.+. .+|..+|.++++.++++++++....++++..++.+++..++.++++.+.+++....++.
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~---------- 216 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH---------- 216 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc----------
Confidence 8643 36999999999999999999998888888778888877777777777666532211110
Q ss_pred hhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcC
Q 007582 262 ERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMD 341 (597)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~ 341 (597)
...+|.|++.... .+++++++|++++++.+++...++|..+.|..+.+..|+..++
T Consensus 217 ------------~~~~~ld~a~~~~------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~ 272 (654)
T TIGR00926 217 ------------WPLHWLDYAKDKH------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD 272 (654)
T ss_pred ------------cchhHHHHhcccc------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence 0012344332221 1245778899999999999999999999999999999988887
Q ss_pred CCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 007582 342 PHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEV 412 (597)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~ 412 (597)
.+.+++..++.+++.+|++.++++.|+.++.++|..+|... ..+++.|+.+|+++++++++++++.+.
T Consensus 273 ~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ve~ 340 (654)
T TIGR00926 273 GDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALVQL 340 (654)
T ss_pred CccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77667788899999999999999999999888887766532 268999999999999999998866654
|
|
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=269.28 Aligned_cols=404 Identities=13% Similarity=0.074 Sum_probs=278.4
Q ss_pred HHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHH
Q 007582 54 SNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYL 133 (597)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 133 (597)
+.+++++.+|.++|++++|+++|| +|||.+++++.++..++.+++.++...+ +..++++||++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~~~----------------~~e~li~GR~i 125 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKSAP----------------SFEMLILGRLI 125 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHhh----------------hHHHHHHHHHH
Confidence 688999999999999999999999 8999999999999999999888876543 57799999999
Q ss_pred HHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe--eeecccchhHHHHHHHHHHHHHHH
Q 007582 134 YSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIV--YVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 134 ~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
.|+..|......|.|+.|++|++. ||..-.+.++++++|..++..++. .+...-.|++.+.++.+..++.++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877 999999999999999999966652 333455799999888877655554
Q ss_pred H--HHhhccceeec-CCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCC
Q 007582 212 A--LAAGKCLYRIQ-QPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKD 288 (597)
Q Consensus 212 ~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (597)
+ +++.+|+|... +.+.+++.+. +..++.+.++..+..+...+.+ .+...
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~s----l~~y~G~~~~~~~~e~~~~e~~------------------------~~~~~ 251 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKA----LKFYRGKEDVEAEIEEMLREIE------------------------EEELE 251 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHH----HHHHhCCCcchhHHHHHHHHHH------------------------Hhccc
Confidence 4 33444444333 2222222221 1112221111111000000000 00000
Q ss_pred CCCCCC-ccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHH
Q 007582 289 SAVAAP-WRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLP 367 (597)
Q Consensus 289 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 367 (597)
+.++.+ ++.+++ ...|+.+...+.+...+++.+++...+|+..++...+...... ...+...+.++.+..++...
T Consensus 252 ~~~~~sl~~~~~~--~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 252 KKKQISLRQLLKN--PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred cccCCcHHHHhcC--cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 001111 112221 1234556667777888899999988888888887666654311 22334445555555655555
Q ss_pred hhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhh
Q 007582 368 LYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFI 447 (597)
Q Consensus 368 l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 447 (597)
++|++ |||+. +.++..++.+..+++........... ...++..++..+++.........|
T Consensus 328 lid~~----gRRpL-----------ll~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~y~~i~~~~~~~~~f~~G~gp 387 (485)
T KOG0569|consen 328 LIDRL----GRRPL-----------LLISLSLMAVALLLMSIALFLSNSFG-----SWLSYLCIAAIFLFIISFAIGPGP 387 (485)
T ss_pred HHHhc----CCcHH-----------HHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHhhhcCCCc
Confidence 55554 98875 45666666666665555432221110 012233345556666777778899
Q ss_pred hHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHH
Q 007582 448 GLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNL 527 (597)
Q Consensus 448 ~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~ 527 (597)
.++-+..|.+|.+.|+.++++..+.+|+.+++.....+.+.+..+. ++|+.|.+.+++..
T Consensus 388 i~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--------------------~~filF~i~~~~~~ 447 (485)
T KOG0569|consen 388 IPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--------------------YVFILFVIPLAIFL 447 (485)
T ss_pred hhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------hhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888654321 46899999999999
Q ss_pred HHHHHhhcccccccCCCCCCCCCCC
Q 007582 528 VLYLYAAAWYKYKPENCSDIKPKPL 552 (597)
Q Consensus 528 v~~~~~~~~~~~~~~e~~~~~~~~~ 552 (597)
+..|+..||||+|+.+|+.++++++
T Consensus 448 i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 448 IYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999998887666443
|
|
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=272.79 Aligned_cols=427 Identities=13% Similarity=0.064 Sum_probs=286.8
Q ss_pred HhHHhHHHHccccc-----CCch--hhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 33 ANGISMVLYFKNEM-----HFDL--AGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYS 105 (597)
Q Consensus 33 ~v~~~~~~yl~~~l-----~~~~--~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~ 105 (597)
+..+.+..++.+.. ..+. .+.+++.+++.+++.++.++.|+++|+ +|||++++++.+++.+|+++++.+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 55555555555432 1222 244899999999999999999999999 8999999999999999999999997
Q ss_pred ccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 007582 106 KNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185 (597)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 185 (597)
+..++++||+++|+|.|+....+|.|++|+.|++. ||...+.+++..++|..+++.+
T Consensus 141 -----------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~ 197 (513)
T KOG0254|consen 141 -----------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCI 197 (513)
T ss_pred -----------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999777 9999999999999999999666
Q ss_pred heeeecc-cchhHHHHHHHHHHHHHHHH--HHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhh
Q 007582 186 IVYVFTE-KSWWLGFLVSSVANFIGLIA--LAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKE 262 (597)
Q Consensus 186 ~~~~~~~-~~w~~~f~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~ 262 (597)
+....+. ++||..+.+..+..++..+. +.+..|++..++.+..+..+. +..++.... .+...++.+.. .+
T Consensus 198 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~----l~~l~g~~~--~~~~~~~~~~~-~~ 270 (513)
T KOG0254|consen 198 NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRS----LKRLRGLSP--EDVEVELELLK-IK 270 (513)
T ss_pred hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHH----HHHHhCCCC--cchHHHHHHHH-HH
Confidence 6555433 58998888766554433333 222455554443333222222 112222110 00011111100 00
Q ss_pred hcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCC
Q 007582 263 RASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDP 342 (597)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~ 342 (597)
. . ......+ .+..|+.+.. ...+|+....+.+..+++..+.+...+|+..+++..+...
T Consensus 271 ~---------------~-~~~~~~~---~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~ 329 (513)
T KOG0254|consen 271 L---------------L-VEAEVAE---GKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS 329 (513)
T ss_pred H---------------H-Hhhhccc---ccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC
Confidence 0 0 0000000 0001211111 1235677778888999999999999999988887766553
Q ss_pred CCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 007582 343 HLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETP 422 (597)
Q Consensus 343 ~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 422 (597)
+. .........++.+..++...+ +|++|||+. +..|...+.+++++.+........... .
T Consensus 330 ~~---~~~~~~~~~v~~~~t~~~~~l----vd~~gRr~l-----------ll~s~~~m~~~~~~~~~~~~~~~~~~~--~ 389 (513)
T KOG0254|consen 330 DT---FLASIILGVVNFLGTLVATYL----VDRFGRRKL-----------LLFGAAGMSICLVILAVVGVFALYYPN--S 389 (513)
T ss_pred ch---HHHHHHHHHHHHHHHHHHHHH----HHHhccHHH-----------HHHhHHHHHHHHHHHHHHHHHhccCCC--c
Confidence 31 112223334444444444444 455588876 667888888888888766433211110 1
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCc
Q 007582 423 PKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWL 502 (597)
Q Consensus 423 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~ 502 (597)
.....+..++...++.......+.+.+|.+..|++|.+.|+.+.++....+|+.+++.....+...... +
T Consensus 390 ~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~--------~-- 459 (513)
T KOG0254|consen 390 SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL--------G-- 459 (513)
T ss_pred ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--------c--
Confidence 123445556666777788888899999999999999999999999999999999999877766553311 0
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHH-HHHHhhcccccccCCCCCCCCCCC
Q 007582 503 HGKDINKNNVNLFYWFLAIVSVLNLV-LYLYAAAWYKYKPENCSDIKPKPL 552 (597)
Q Consensus 503 ~~~~~~~~~~~~~f~~~~~~~~~~~v-~~~~~~~~~~~~~~e~~~~~~~~~ 552 (597)
....|..+++++.+... +++++.||||++++||++..+++.
T Consensus 460 ---------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 460 ---------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred ---------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 12347777777777777 788899999999999988776543
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=257.59 Aligned_cols=450 Identities=12% Similarity=0.009 Sum_probs=247.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHccc-----ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKN-----EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~-----~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
.+.+.+..+.+..++..+.... .+.+.+.+.. +.+.+..+.+++.+.+.++..++.++.|+++|| +|||+++.
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~ 90 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFC-ISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYG 90 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHH
Confidence 3455555555555555544433 3333333332 234556677899999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
++.++..+++++++++.+... ..+...++++|+++|++.|+..+..+.+++|.+|++. |++
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~ 151 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSP-------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGA 151 (502)
T ss_pred HHHHHHHHHHHHHHHccCccc-------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHH
Confidence 999999999988887642110 1135689999999999999999999999999999776 999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeee-----------------------cccchhHHHHHHHHHHHHHHHHH--Hhhcccee
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVF-----------------------TEKSWWLGFLVSSVANFIGLIAL--AAGKCLYR 221 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~w~~~f~i~~~~~~~~~~~~--~~~~~~~~ 221 (597)
..++.+....+|..+++.++..+. ..++||++|.+.++..++..+.. ++++|+|.
T Consensus 152 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l 231 (502)
T TIGR00887 152 MMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYT 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999988887654321 12479999988776655444332 23333332
Q ss_pred ecCCCC-ChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccc-cc
Q 007582 222 IQQPGE-SPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRV-CT 299 (597)
Q Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 299 (597)
..+++. ++..+.. . ...+.+ .++..++ .+ +.+.+.+..+.+|+. ++
T Consensus 232 ~~~~~~~~~a~~~~---~-~~~~~~--~~~~~~~------------------------~~--~~~~~~~~~~~~~~~l~~ 279 (502)
T TIGR00887 232 ADVAKDVEQAASDM---S-AVLQVK--IEAEPDE------------------------VE--KASTAVEVPKASWSDFFT 279 (502)
T ss_pred HHhCcchHHHHHHH---H-HHhccc--cccCccc------------------------cc--chhccccchhhhHHHHHH
Confidence 222211 1111100 0 000000 0000000 00 000000000012221 11
Q ss_pred cch-hHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCccc----c--cCCcccchhhHHHHHHHHhhhhh
Q 007582 300 VTQ-VEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIK----V--PTSSIPVIPLLFMSILLPLYEFF 372 (597)
Q Consensus 300 ~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~i~~i~~~~l~~~~ 372 (597)
... .+..++.+.....++.+.+.+....++ .+.+.+..+++....+.. . .......+..+..++...+...+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l 358 (502)
T TIGR00887 280 HFFKWRHGKHLLGTAGSWFLLDIAFYGVNLN-QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFL 358 (502)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHccccc-cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100 011111111111111111111111111 222223334432210000 0 00001112222333344455566
Q ss_pred HHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHh
Q 007582 373 FVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEF 452 (597)
Q Consensus 373 ~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 452 (597)
.|+++||.. +.++..++++++.+.++.... . ... ..++...++..++.....+..+.+
T Consensus 359 ~dr~gRR~~-----------l~~~~~~~~~~~~~l~~~~~~----~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 416 (502)
T TIGR00887 359 VDIIGRKPI-----------QLMGFFILTVLFFVLGFAYNH----L------STH-GFLAIYVLAQFFANFGPNATTFIV 416 (502)
T ss_pred hhhhcchhH-----------HHHHHHHHHHHHHHHHHHHHh----c------chh-HHHHHHHHHHHHHhcCCCchhhhh
Confidence 666688764 345555566555555433100 0 011 111222222223334456677888
Q ss_pred hhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 007582 453 FYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLY 532 (597)
Q Consensus 453 ~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 532 (597)
..|.+|.+.|+++.++.+..+++++++++.+.+.+.+.... +.|+-. ..++...|++++++++++.++ ++
T Consensus 417 ~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~-----~~~~~~~~~i~~~~~~~~~i~-~~ 486 (502)
T TIGR00887 417 PGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP----TKGYPT-----GIWMGHVLEIFALFMFLGILF-TL 486 (502)
T ss_pred hhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccc----cccccc-----cccchHHHHHHHHHHHHHHHH-he
Confidence 89999999999999999999999999999998876431100 000000 011234578888888877664 45
Q ss_pred hhcccccccCCCCCC
Q 007582 533 AAAWYKYKPENCSDI 547 (597)
Q Consensus 533 ~~~~~~~~~~e~~~~ 547 (597)
+.||||++++||+|.
T Consensus 487 ~lpEt~~~~leei~~ 501 (502)
T TIGR00887 487 LIPETKGKSLEELSG 501 (502)
T ss_pred EeccCCCCCHHhhhC
Confidence 679999999998875
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=258.07 Aligned_cols=447 Identities=11% Similarity=0.004 Sum_probs=249.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccc--------cCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNE--------MHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF 82 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~--------l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~ 82 (597)
+.+.+..+.+....+...+... +.+...+.++++ ++.+..+.+++.+++.++..++.++.|+++|| +|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr 85 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTA-VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRR 85 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccc-eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccH
Confidence 3355555655555544443333 333333334444 38888999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-ccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhh
Q 007582 83 ATCLIFGTLEVLALVMLTIQAYS-KNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGA 161 (597)
Q Consensus 83 ~~i~~~~~~~~ig~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~ 161 (597)
++++++.+++.++.++++++... .... .++......++++|+++|++.|...+..+++++|.+|+++
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~---- 153 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIG--------PDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI---- 153 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccc--------ccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh----
Confidence 99999999999988877764210 0000 0001235678899999999999999999999999999766
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhheee--------ecccchhHHHHHHHHHHHHHHHHHHhhccceeecC-CCCChhHH
Q 007582 162 KALASYFNFYLLATTVAAVIGVTGIVYV--------FTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQ-PGESPLVR 232 (597)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (597)
|++.+++++.+..+|..+++.++..+ .+.++||++|++..+..++..+..++ .|+.++.. .+++ .++
T Consensus 154 --rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~-l~~s~~~l~~~~~-~~~ 229 (479)
T PRK10077 154 --RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF-VPETPRYLMSRGK-QEQ 229 (479)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHcCC-HHH
Confidence 99999999999999999987765433 24579999999877665554433322 22211100 0011 000
Q ss_pred HHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhH
Q 007582 233 VAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRM 312 (597)
Q Consensus 233 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (597)
..+ ..++. ....+..+...+ ..+ ....+. ...+..+. . ........
T Consensus 230 ~~~----~~~~~-~~~~~~~~~~~~--------------------~~~--~~~~~~---~~~~~~~~---~-~~~~~~~~ 275 (479)
T PRK10077 230 AEG----ILRKI-MGNTLATQALQE--------------------IKH--SLDHGR---KTGGKLLM---F-GVGVIVIG 275 (479)
T ss_pred HHH----HHHHH-cCChhHHHHHHH--------------------HHH--HHHHhh---hhhhhhcc---h-hHHHHHHH
Confidence 000 00000 000000000000 000 000000 00000000 0 00000000
Q ss_pred hhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHH
Q 007582 313 MPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQR 392 (597)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~ 392 (597)
+.+...++........++.+.+.+..+.+.. ..........+..++..++..++.|+++||..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~------~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~----------- 338 (479)
T PRK10077 276 VMLSVFQQFVGINVVLYYAPEIFKTLGASTD------IALLQTIIVGVINLTFTVLAIMTVDKFGRKPL----------- 338 (479)
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHcCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH-----------
Confidence 0011111111111111122222222222211 11112222334444555666666666677654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHH-HHhhhHHHhhhhccCcchhhHHHHHHHH
Q 007582 393 VGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADM-FTFIGLLEFFYKEAPAGMKTLASSFTYL 471 (597)
Q Consensus 393 ~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~r~~~~~~~~~ 471 (597)
+..+.+++++++++....... .....+.....++.+.+.. .+.|..+.++.|.+|.+.|++++|+...
T Consensus 339 ~i~~~~~~~v~~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~ 407 (479)
T PRK10077 339 QIIGALGMAIGMFSLGTAFYT-----------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVA 407 (479)
T ss_pred HHHhHHHHHHHHHHHHHHHhc-----------CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHH
Confidence 556777777776666543110 1111222222222233322 3457778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCC
Q 007582 472 SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDIKPK 550 (597)
Q Consensus 472 ~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~ 550 (597)
.+++++.+++.+.|.+.. .+|..+ ..+....|+++++++++++++.+++.||+|++++||+++.++
T Consensus 408 ~~~~g~~~~~~~~p~~~~---------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 473 (479)
T PRK10077 408 AQWIANYFVSWTFPMMDK---------NSWLVA----HFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWE 473 (479)
T ss_pred HHHHHHHHHHHHhHHHHh---------ccchhh----hccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHh
Confidence 999999999888876541 012111 011123477778888888777777889999988887766553
|
|
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-26 Score=251.65 Aligned_cols=154 Identities=12% Similarity=0.080 Sum_probs=130.0
Q ss_pred HhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 33 ANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 33 ~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
.+.+.+.+++.++++++..+.+++.+++.++..++.+++|+++|| +|||+++++++++..++.+++++++
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~--------- 253 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ--------- 253 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 456667778888999999999999999999999999999999999 8999999999999999998888775
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeee--
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF-- 190 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-- 190 (597)
+.+.++++|++.|+|.|+..+..+++++|.+|++. |++.+++......+|.++++.++..+.
T Consensus 254 ----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~ 317 (742)
T TIGR01299 254 ----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPH 317 (742)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999655 999999998888899888886543322
Q ss_pred -----------cccchhHHHHHHHHHHHHHHHH
Q 007582 191 -----------TEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 191 -----------~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
...+||+.+++.++..++.+++
T Consensus 318 ~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred ccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 1246999888877665554433
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-24 Score=235.80 Aligned_cols=177 Identities=14% Similarity=0.041 Sum_probs=133.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhh-HHH-----HHHHHHHHHHhHhhhhHHHhhhccchhHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAG-ASN-----TLTNFFGSTFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~-~~~-----i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
++|......+..+++.+- +++..+..+++.++++.+... .++ +.++..++..++.++.|+++|| +|||+++.
T Consensus 14 ~~~~~~~~~~g~~~~~~d-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~ 91 (490)
T PRK10642 14 LRKAITAASLGNAMEWFD-FGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHH
Confidence 356666666777777654 446777888888887643322 122 2466778888999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
++.+++.++++++++++++..++ .....++++.|+++|+|.|+..+...++++|.+|+++ |++
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g-----------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~ 154 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIG-----------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGF 154 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHH-----------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcH
Confidence 99999999999999987533110 0011358999999999999999999999999999776 999
Q ss_pred HHHHHHHHHHHHHHHHhhhhee----ee----cccchhHHHHHHHHHHHH
Q 007582 167 YFNFYLLATTVAAVIGVTGIVY----VF----TEKSWWLGFLVSSVANFI 208 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~----~~----~~~~w~~~f~i~~~~~~~ 208 (597)
..++...+..+|..+++.+... +. ..+|||++|++.+++.++
T Consensus 155 ~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 155 MGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 9999888888888777654432 21 257999999997655443
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-24 Score=223.45 Aligned_cols=375 Identities=14% Similarity=0.034 Sum_probs=240.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
+.+...+.+.+..++.....|. ...+.+.+.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFV-PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHH-HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHH
Confidence 3455566666666665555553 3334466788999999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++++++..++ +.+.++++|+++|++.+...+...+++.|.+|+++ |++.++++
T Consensus 84 ~~~~~~~~~~~~-------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~ 138 (390)
T PRK03545 84 FIASHVLSALAW-------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLL 138 (390)
T ss_pred HHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHH
Confidence 999999888875 56789999999999999999999999999999665 99999999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCC
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDN 251 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (597)
..+.++|..++|.+++.+.+..+||+.|++.+++.++..++.+...|+.++ +++++..
T Consensus 139 ~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~-------------------- 196 (390)
T PRK03545 139 ATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS--EHSGSLK-------------------- 196 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcchHH--------------------
Confidence 999999999999999888888899999999877765554443332222100 0000000
Q ss_pred chhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhH-HHHHHHhHhhhcccc
Q 007582 252 PEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPI-LASTILMNTCLAQLQ 330 (597)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~ 330 (597)
...+ .++ + +.+...... +......+... .+.
T Consensus 197 --~~~~---------------------------------------~~~-----~-~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (390)
T PRK03545 197 --SLPL---------------------------------------LFR-----R-PALVSLYLLTVVVVTAHFTAY-SYI 228 (390)
T ss_pred --HHHH---------------------------------------HHh-----C-cHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 0000 000 0 111111111 11111111111 111
Q ss_pred hhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007582 331 TFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLV 410 (597)
Q Consensus 331 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~ 410 (597)
..+.....+.+.. ..+.......+..++..++..++.|+.+||. +..+..+..+++......
T Consensus 229 ~~~l~~~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~------------~~~~~~~~~~~~~~l~~~ 290 (390)
T PRK03545 229 EPFVQQVAGLSEN------FATLLLLLFGGAGIIGSVLFSRLGNRHPSGF------------LLIAIALLLVCLLLLLPA 290 (390)
T ss_pred HHHHHHhcCCCcc------HHHHHHHHHHHHHHHHHHHHHHHhhccchhH------------HHHHHHHHHHHHHHHHHH
Confidence 1222211222211 1122222333444555555565544433322 334444444443332221
Q ss_pred HHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007582 411 EVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAV 490 (597)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~ 490 (597)
..+.+.++...++.+++.....+.....+.+..| +.|+.++|+.+....++..+|+.+.+.+.+.
T Consensus 291 --------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~ 355 (390)
T PRK03545 291 --------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH 355 (390)
T ss_pred --------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1233444555667777777777777888888877 5889999999988999999999998877542
Q ss_pred hcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 491 TKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAA 535 (597)
Q Consensus 491 ~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 535 (597)
. | +...|+..+.+.++++++.++..+
T Consensus 356 ~--------g-----------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 356 L--------G-----------LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred c--------C-----------hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 1 2 234577777777777777665553
|
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=230.22 Aligned_cols=408 Identities=13% Similarity=0.087 Sum_probs=232.3
Q ss_pred chhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHH
Q 007582 49 DLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128 (597)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (597)
+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.+++....+. .+.+.++
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 131 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAFA----------------LSVEMLI 131 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhccc----------------cchHHHH
Confidence 38899999999999999999999999999 899999999999999999888765431 2456899
Q ss_pred HHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh---eeeecccchhHHHHHHHHH
Q 007582 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI---VYVFTEKSWWLGFLVSSVA 205 (597)
Q Consensus 129 ~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~w~~~f~i~~~~ 205 (597)
++|+++|+|.|...+...++++|.+|+++ |++.+++++.+.++|..+++.++ .......+||+.|++.++.
T Consensus 132 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~ 205 (481)
T TIGR00879 132 VGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIP 205 (481)
T ss_pred HHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999766 99999999999999999999988 6666778999999996655
Q ss_pred HHHHHHHHHhhccceeec-CCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhccc
Q 007582 206 NFIGLIALAAGKCLYRIQ-QPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAI 284 (597)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (597)
.++..+..++ .++.+.. ..+++ ..+..+. .++......+......+.+..+... ..++
T Consensus 206 ~~~~~~~~~~-l~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~--- 264 (481)
T TIGR00879 206 AGLLFLGLFF-LPESPRWLVGKGR-VEEARKS----LARLRGTSGEDKELLDELELIDIKR------------SIEK--- 264 (481)
T ss_pred HHHHHHHHhc-CCCChHHHHHcCC-hHHHHHH----HHHHhCCCCCcHHHHHHHHHHHHHH------------HHHH---
Confidence 4444433322 2221100 00000 0000000 0000000000000000000000000 0000
Q ss_pred CCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHH
Q 007582 285 MPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSI 364 (597)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 364 (597)
+. ....|..+........++.+....+..+..........++........+.+.. ..........+..++
T Consensus 265 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~ 334 (481)
T TIGR00879 265 --RS--VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTD------HAFLVSIIVGAVNFA 334 (481)
T ss_pred --hh--ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCch------HHHHHHHHHHHHHHH
Confidence 00 00001100000000011111111111111111111111112222222222211 112222333444445
Q ss_pred HHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHH
Q 007582 365 LLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMF 444 (597)
Q Consensus 365 ~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 444 (597)
..++..++.|+++||.. +.++.+++++++++.++..... ....+ ...+..++....++.+.....
T Consensus 335 ~~~~~g~l~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~ 399 (481)
T TIGR00879 335 FTFVAIFLVDRFGRRPL-----------LLIGAAGMAICLFVLGILGASF---VTGSS-KSSGNVAIVFILLFIAFFAMG 399 (481)
T ss_pred HHHHHHHHHHHhcchHH-----------HHHHHHHHHHHHHHHHHHhhcc---cCCcc-cchhHHHHHHHHHHHHHHHcc
Confidence 55556666666566543 4456666666666655331100 00000 011333333333444444445
Q ss_pred HhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHH
Q 007582 445 TFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSV 524 (597)
Q Consensus 445 ~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~ 524 (597)
..+..+.+..|.+|++.|++++++......+++++++.+.+.+.+.. +|. +.|++++++++
T Consensus 400 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--------~~~-----------~~f~~~~~~~~ 460 (481)
T TIGR00879 400 WGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI--------GVG-----------GVFIFFGGLNV 460 (481)
T ss_pred ccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------Ccc-----------ceehhHHHHHH
Confidence 56777788899999999999999999999999999998887764321 233 23778888888
Q ss_pred HHHHHHHHhhcccccccCCC
Q 007582 525 LNLVLYLYAAAWYKYKPENC 544 (597)
Q Consensus 525 ~~~v~~~~~~~~~~~~~~e~ 544 (597)
+..++.+++.+|+|++++++
T Consensus 461 ~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 461 LGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHheecccCCCCChhh
Confidence 88877777778877666543
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-23 Score=218.58 Aligned_cols=356 Identities=11% Similarity=-0.001 Sum_probs=226.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
.++..+..+....+++.+..+.... ..+.+.+++|.++.+.+++.+.+.++..++.++.|+++|| +|||+++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGV-AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHH
Confidence 4455666666677777666665444 4456677899999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++.++++.+. +...+++.|++.|++.+...+...++++|.+|+++ |++.++++
T Consensus 90 ~~~~~~~~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 144 (406)
T PRK11551 90 FGLFSLATAQAW-------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVSLM 144 (406)
T ss_pred HHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 888888777764 45678999999999999999999999999998655 99999999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCC
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDN 251 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (597)
+...++|..+++.+++.+.+..+|+..|++..++.++..++.....|+.+...+ ++. ..+.
T Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------~~~--~~~~ 205 (406)
T PRK11551 145 YCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQ-----------------AAG--AGKQ 205 (406)
T ss_pred HHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHh-----------------ccC--cchh
Confidence 999999999999998888788899999988766544444333332221100000 000 0000
Q ss_pred chhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHH-HHHhHhhhcccc
Q 007582 252 PEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILAS-TILMNTCLAQLQ 330 (597)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 330 (597)
.+. ..+. .++. .+ .++.......... ....+.... +.
T Consensus 206 ~~~-----------------------~~~~---------------~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (406)
T PRK11551 206 RAP-----------------------VLRA---------------LFGE--GR-ATATLLLWISYFFTLIVLYFLLN-WL 243 (406)
T ss_pred hhh-----------------------hHHH---------------Hhhh--hh-hhHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 000 0000 0000 00 0111111111111 111111111 11
Q ss_pred hhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007582 331 TFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLV 410 (597)
Q Consensus 331 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~ 410 (597)
..+ .+..+.+.. ..+.......+..++...+..++.|+++||+. +..+.+.+.++++.....
T Consensus 244 p~~-~~~~g~s~~------~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 244 PSL-LVGQGLSRS------QAGLVQIAFNIGGALGSLLIGALMDRLRPRRV-----------VLLIYAGILASLAALAAA 305 (406)
T ss_pred HHH-HHhCCCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-----------HHHHHHHHHHHHHHHHhc
Confidence 111 111222211 12233333445555666666677666666543 222333333333322211
Q ss_pred HHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 411 EVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~ 488 (597)
.+.+.+....++.+++.....+....+..+.+|.+.|++++|+.+....+++.+++.+.+.+.
T Consensus 306 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 306 ---------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred ---------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 122334444556666666777888889999999999999999999999999999999888764
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-23 Score=215.74 Aligned_cols=379 Identities=12% Similarity=0.016 Sum_probs=245.9
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
.+..|.+..++...++..++.....+.++.|+.+++|.+..+.+++.+++.++..++.++.|+++|| +||||++.++.+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~ 89 (399)
T PRK05122 11 LRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLC 89 (399)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHH
Confidence 4456788888889999999988889999999999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.+++.++....+.. ..+..++++.|+++|+|.+...+....++.|..|+++ |++.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 152 (399)
T PRK05122 90 GCALSGLLYLLAGLLAAWP-----------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISW 152 (399)
T ss_pred HHHHHHHHHHHhhhhhccc-----------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhh
Confidence 9888877766543111000 1245678999999999999999999999999998666 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCC
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (597)
+..+.++|..+++.+++++.+..+|+..+++..++.++..+.. ...+ ..+++++ +
T Consensus 153 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~---------------------~ 207 (399)
T PRK05122 153 NGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRP---AVPPVKG---------------------E 207 (399)
T ss_pred hhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCC---CCCCCCc---------------------c
Confidence 9999999999999999888888899988877655543332211 1100 0000000 0
Q ss_pred CchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccc
Q 007582 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQ 330 (597)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (597)
+ .++ .+..|+.............. +....
T Consensus 208 ------------------------~-----------------~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (399)
T PRK05122 208 ------------------------R-----------------LPF-------RRVLGRVWPYGMGLALASIG---FGTIA 236 (399)
T ss_pred ------------------------c-----------------hhH-------HHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 0 000 00011111100001011110 00111
Q ss_pred hhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007582 331 TFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLV 410 (597)
Q Consensus 331 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~ 410 (597)
+....+....... ..+.......+..++..++..++.|++++|+ .+..+.++++++.++....
T Consensus 237 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-----------~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 237 TFITLYYAARGWD------GAALALTLFGVAFVGARLLFGNLINRLGGLR-----------VAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHHHHHHHcccc------cchHHHHHHHHHHHHHHHHHHHHHHHhccHH-----------HHHHHHHHHHHHHHHHHHh
Confidence 1111111111100 1111122233444445555666655555443 2445555555555444332
Q ss_pred HHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007582 411 EVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAV 490 (597)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~ 490 (597)
.+.+.+++..++.+++.....+.......+.+|++.|++++++.+....++..+++.+.+.+.+.
T Consensus 300 ---------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 300 ---------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred ---------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12334455567788888877887777888999999999999999999999988888777765431
Q ss_pred hcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 007582 491 TKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAA 534 (597)
Q Consensus 491 ~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~ 534 (597)
.+++..|++.+++++++.++.+++.
T Consensus 365 -------------------~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 365 -------------------FGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred -------------------cCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1234567777777777766555443
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-23 Score=216.75 Aligned_cols=383 Identities=11% Similarity=0.029 Sum_probs=244.2
Q ss_pred ccchhh-cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhH
Q 007582 5 VENIKQ-KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFA 83 (597)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~ 83 (597)
+++.++ +...+.++.+.+..++...+.....+.++.|+.+++|.|..+.+++.+.+.++..++.++.|+++|| +||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~ 82 (392)
T PRK12382 4 VSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKR 82 (392)
T ss_pred cccCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchH
Confidence 444444 4456777777777888888878888888889999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhh
Q 007582 84 TCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKA 163 (597)
Q Consensus 84 ~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~ 163 (597)
.+.++.++..++.+...+....+.. ...+...++++|+++|+|.+...+...+++.|.+|+++
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------ 145 (392)
T PRK12382 83 SALQGMLACGLAGLAYLLAAILPVS-----------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------ 145 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccc-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------
Confidence 9999988877765543322111100 02356789999999999999999988999999998666
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHh
Q 007582 164 LASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243 (597)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (597)
|++.+++++.+.++|..++|.+++++.+.++|+..+.+.....++... +....+ +.+++++
T Consensus 146 r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~--------------- 206 (392)
T PRK12382 146 SGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA-FNGTVR---KVPAHAG--------------- 206 (392)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH-HHHhcc---CCCCCcc---------------
Confidence 999999999999999999999998888888999876655443222221 111111 0000000
Q ss_pred cCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhH-hhHHHHHHHh
Q 007582 244 RKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRM-MPILASTILM 322 (597)
Q Consensus 244 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 322 (597)
+.+ +.. +..|..... +.........
T Consensus 207 ---~~~---------------------------~~~------------------------~~~~~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 207 ---ERP---------------------------SLW------------------------SVVGLIWKPGLGLALQGVGF 232 (392)
T ss_pred ---cCc---------------------------hHH------------------------HHHHHHHHhHHHHHHHHHHH
Confidence 000 000 000000000 0000010111
Q ss_pred HhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHH
Q 007582 323 NTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAV 402 (597)
Q Consensus 323 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i 402 (597)
... ..+...+..+ .+.+ ..+.......+..++..++..++.|++++|+. +..+..+.++
T Consensus 233 ~~~-~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-----------~~~~~~~~~~ 291 (392)
T PRK12382 233 AVI-GTFVSLYFAS-KGWA--------MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-----------AIVSLLVETV 291 (392)
T ss_pred hHH-HHHHHHHHHh-cCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-----------hHHHHHHHHH
Confidence 110 0110111111 1111 01111223344445556667777666665543 3455555555
Q ss_pred HHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHH
Q 007582 403 SMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSA 482 (597)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~ 482 (597)
+.++.... .+.++..+..++.+++.....+.......+.+|++.|+++.++.+....+++.+++.
T Consensus 292 ~~~~~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 292 GLLLLWLA---------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred HHHHHHHc---------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443322 122344455667778877778887888889999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 483 FVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYA 533 (597)
Q Consensus 483 ~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 533 (597)
+.+.+.+.. || ...|.+.+++.++..++.++.
T Consensus 357 ~~g~l~~~~--------g~-----------~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 357 LAGMLATSF--------GY-----------PSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHh--------Cc-----------hHHHHHHHHHHHHHHHHHHhh
Confidence 888765421 23 345777777777776655543
|
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-23 Score=221.15 Aligned_cols=396 Identities=13% Similarity=0.054 Sum_probs=243.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|....++...++..++.......++.+ .++++.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGL 94 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHH
Confidence 344445555666666655444444444 45677899999999999999999999999999999 8999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++.+...... ..+.+.+++.|++.|++.+...+...+++.|..|+++ |++..++.+..
T Consensus 95 ~~~~~~~~~~~~--------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 154 (417)
T PRK10489 95 GFIGLALNAFLP--------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLT 154 (417)
T ss_pred HHHHHHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHH
Confidence 776655321100 1246678899999999998888888899999998554 89999999999
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchh
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEE 254 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (597)
.++|..+||.+++++.+..+|++.|.+..+..++..++.+. .|+. +++.++ ..+..++
T Consensus 155 ~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~---~~~~~~------------------~~~~~~~ 212 (417)
T PRK10489 155 VRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPAL---PPPPQP------------------REHPLRS 212 (417)
T ss_pred HhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCC---CCCCcc------------------cccchHH
Confidence 99999999999998877789999998877665555443322 2211 110000 0000000
Q ss_pred hhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHH
Q 007582 255 LYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSI 334 (597)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~ 334 (597)
..+ .++ .....+.+...+.......... ........+.
T Consensus 213 ~~~------------------------------------~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~ 250 (417)
T PRK10489 213 LLA------------------------------------GFR-----FLLASPVVGGIALLGGLLTMAS-AVRVLYPALA 250 (417)
T ss_pred HHH------------------------------------HHH-----HHHcChHHHHHHHHHHHHHHHH-hHHHhhHHHH
Confidence 000 000 0000011111111111111111 1111111222
Q ss_pred hhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 335 TQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR 414 (597)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~ 414 (597)
.+..+.+.. ..+.+.....++.++...+..++ .+|. +..+.+..+.++.+++++.....
T Consensus 251 ~~~~g~~~~------~~g~~~~~~~~g~~ig~~~~~~l----~~~~-------~~~~~l~~~~~~~~~~~~~~~~~---- 309 (417)
T PRK10489 251 DEVWQMGAA------QIGLLYAAVPLGAALGALTSGWL----AHSA-------RPGLLMLLSTLGSFLAVGLFGLM---- 309 (417)
T ss_pred HhccCCChh------HhHHHHHHHHHHHHHHHHHHHHh----hhcc-------CcchHHHHHHHHHHHHHHHHHcc----
Confidence 211222211 12223333344445555555544 2221 11223445555555555444321
Q ss_pred hhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 007582 415 RNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRI 494 (597)
Q Consensus 415 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~ 494 (597)
.+++.+....++.+++.....+....++.+.+|++.||+++|+....+.++..+++.+.+.+.+..+
T Consensus 310 -----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-- 376 (417)
T PRK10489 310 -----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-- 376 (417)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc--
Confidence 1333444455666777777777778889999999999999999999999999999999988764321
Q ss_pred CCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCC
Q 007582 495 TPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDI 547 (597)
Q Consensus 495 ~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~ 547 (597)
....++.++++.++..++.+...+++|++++||++.
T Consensus 377 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 377 -----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred -----------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 122466667666666666777789999998888764
|
|
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-22 Score=220.12 Aligned_cols=403 Identities=10% Similarity=0.027 Sum_probs=241.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++.++.+....++..+..+.+.+.++.+. +++|.+..+.+++.+.+.++..++.++.|+++|| +|||++++.+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHH
Confidence 355678888888888888888877777665 4699999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.+++..++ +...++++|+++|+|.|...+...+++.|.+|+++ |++.+++++
T Consensus 86 ~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 140 (471)
T PRK10504 86 TLGSLFCALSG-------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHhC-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 88888877654 45678999999999999999999999999998544 899999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHH---HH--HHHHHhcCCC
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQ---VL--VVAIKNRKLS 247 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~ 247 (597)
...++|..++|.+++++.+..+||+.|.+..++..+..++.....|+....+++......... .. .....+....
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGL 220 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999998888999999998777666655555444443222221111100000 00 0001111000
Q ss_pred CCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhc
Q 007582 248 LPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLA 327 (597)
Q Consensus 248 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 327 (597)
.. ............ . ... .-+..+.+...+ ...+.+.++ .|.+...+...+..........
T Consensus 221 ~~-~~~~~~~~~~~~--~--~~~-----~~~~~~~~~~~~---~~~~~~l~~------~~~~~~~l~~~~~~~~~~~~~~ 281 (471)
T PRK10504 221 GL-SPLAIAGLVAVG--V--VAL-----LLYLLHARNNNR---ALFSLKLFR------TRTFSLGLAGSFAGRIGSGMLP 281 (471)
T ss_pred Cc-chHHHHHHHHHH--H--HHH-----HHHHHHHhcCCC---CccCHHHhc------ccchHHHHHHHHHHHHHHHHHH
Confidence 00 000000000000 0 000 000000000000 000111111 1112111111111111111111
Q ss_pred ccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 007582 328 QLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVA 407 (597)
Q Consensus 328 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~ 407 (597)
...+.+..+..+.+.. ..+.......+..+...++..++.|++++|+. +..+.++.+++..+.
T Consensus 282 ~~~~~~~~~~~g~~~~------~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~-----------~~~~~~~~~~~~~~~ 344 (471)
T PRK10504 282 FMTPVFLQIGLGFSPF------HAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV-----------LVATTLGLALVSLLF 344 (471)
T ss_pred HHHHHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH-----------HHHHHHHHHHHHHHH
Confidence 1112222222222211 11222222334444444666666666565543 445555555554443
Q ss_pred HHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 408 GLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDII 487 (597)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i 487 (597)
.+.. .....+++...+++.+++.+...+..+..+.+.+|++.++.+++++++.+.+++.+++.+.+.+
T Consensus 345 ~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 345 MLVA------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred Hhcc------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221 0112233334456667888888888889999999999999999999999999999999998876
Q ss_pred hhh
Q 007582 488 NAV 490 (597)
Q Consensus 488 ~~~ 490 (597)
...
T Consensus 413 l~~ 415 (471)
T PRK10504 413 LGL 415 (471)
T ss_pred HHH
Confidence 543
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-23 Score=225.10 Aligned_cols=400 Identities=11% Similarity=0.014 Sum_probs=242.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
|..+..++...++..... .+.....+.+.+++|.+..+.+|+.+.|.++..++.++.|+++|| +|||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~-tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDA-TVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 445555555555554444 455555667788999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
+++++++.++ +.+.++++|+++|+|.|+..+.....+.+.++++ ++|++.++++..
T Consensus 83 ~~~~~~~~a~-------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~-----~~r~~~~g~~~~ 138 (495)
T PRK14995 83 LASLAAAFSP-------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE-----KQRNMALGVWAA 138 (495)
T ss_pred HHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-----HHHHHHHHHHHH
Confidence 9999999875 5668999999999999999888877787776421 239999999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHH------HHHHHHHhcCCC
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQ------VLVVAIKNRKLS 247 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 247 (597)
..++|..+||.+++++.+..+||+.|++..++.++.+++.....|+...++.++.+...... .+...+.+...
T Consensus 139 ~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~- 217 (495)
T PRK14995 139 VGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALK- 217 (495)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccc-
Confidence 99999999999999999999999999998877666655554444432221111111111100 00111111000
Q ss_pred CCCCchh-hhhh-hhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhh
Q 007582 248 LPDNPEE-LYEI-NEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTC 325 (597)
Q Consensus 248 ~p~~~~~-l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 325 (597)
...+... .... ..... -..+... +...+. .-.+++.+++ +.........+........
T Consensus 218 ~~~~~~~~~~~~~~~~~~-----------l~~f~~~-e~~~~~--p~~~~~lf~~------~~~~~~~~~~~~~~~~~~~ 277 (495)
T PRK14995 218 GFLSLWVTSLTLLTGALL-----------LGLFIRT-QLAASR--PMIDMRLFTH------RIILSGVVMAMTAMITLVG 277 (495)
T ss_pred cCCchHHHHHHHHHHHHH-----------HHHHHHH-HhcCCC--CCcCHHHhCC------cccHHHHHHHHHHHHHHHH
Confidence 0000000 0000 00000 0000000 000000 0001111211 1111111111111111111
Q ss_pred hcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 007582 326 LAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMT 405 (597)
Q Consensus 326 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~ 405 (597)
...+.+.+.+...+.+.. ..+.......+...+..++..++.++.++|+. +..|.++.+++..
T Consensus 278 ~~~~~~~~lq~v~g~s~~------~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-----------~~~g~~~~~~~~~ 340 (495)
T PRK14995 278 FELLMAQELQFVHGLSPL------EAGMFMLPVMVASGFSGPIAGILVSRLGLRLV-----------ATGGMALSALSFY 340 (495)
T ss_pred HHHHHHHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH-----------HHHHHHHHHHHHH
Confidence 111112222222233221 22333333455566666777777666565432 4566666666655
Q ss_pred HHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007582 406 VAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVD 485 (597)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~ 485 (597)
...... ...+.+......++.+++.+...+.....+.+.+|++.++.++++.++.+.+|+.+|..+.+
T Consensus 341 ~l~~~~------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 341 GLAMTD------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFG 408 (495)
T ss_pred HHHHhc------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 443321 01233344556678899988988888999999999999999999999999999999998887
Q ss_pred HHhh
Q 007582 486 IINA 489 (597)
Q Consensus 486 ~i~~ 489 (597)
.+.+
T Consensus 409 ~i~~ 412 (495)
T PRK14995 409 LLLS 412 (495)
T ss_pred HHHH
Confidence 6643
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=219.62 Aligned_cols=176 Identities=13% Similarity=0.093 Sum_probs=154.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
.+.+|+.+.++...++..++++.+.+++++|+++++|++..+.+++.+.+.++..++.++.|+++|| +|||+++.++.+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~ 81 (395)
T PRK10054 3 LSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAIT 81 (395)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.++.++++ +.+.+++.|.+.|.+.+...++..++.+|.+|+++ |++.+++
T Consensus 82 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~ 136 (395)
T PRK10054 82 AFASGFIAIPLVN-------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSL 136 (395)
T ss_pred HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHH
Confidence 8888888877765 45567778888888888888889999999998655 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
.+...++|..++|.+++++.. .+|+.+|.+.+++.++..++.
T Consensus 137 ~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 137 NYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999988764 689999998777766654443
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-23 Score=226.56 Aligned_cols=387 Identities=14% Similarity=0.064 Sum_probs=229.2
Q ss_pred HHHcccccCCc---hhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 007582 39 VLYFKNEMHFD---LAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK 115 (597)
Q Consensus 39 ~~yl~~~l~~~---~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 115 (597)
.+.+.++++++ ..+.+++.+++.++..++.++.|+++|| +|||++++++.++..++.++.++++
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~------------ 178 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP------------ 178 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc------------
Confidence 34567889998 8999999999999999999999999999 8999999999999999998888775
Q ss_pred CCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccch
Q 007582 116 SSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSW 195 (597)
Q Consensus 116 ~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w 195 (597)
+++.+++.|++.|++.|+..+...++++|.+|+++ |++..+++..+..+|.++++.++..+.+ |
T Consensus 179 -------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---w 242 (505)
T TIGR00898 179 -------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---W 242 (505)
T ss_pred -------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---H
Confidence 56689999999999999999999999999999766 8999999999999999999888766543 9
Q ss_pred hHHHHHHHHHHHHHHHHHHhh--ccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCC
Q 007582 196 WLGFLVSSVANFIGLIALAAG--KCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHA 273 (597)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 273 (597)
|+.|++..+..++..+..+.. .|++...+.+.++..+ .+....+.++...+ .+..+....+
T Consensus 243 r~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~---~l~~~~~~~~~~~~---~~~~~~~~~~----------- 305 (505)
T TIGR00898 243 RWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALK---ILQRIAKINGKKLP---AEVLSLSLEK----------- 305 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHH---HHHHHHHHcCCCCC---HHHHhhhhhh-----------
Confidence 999988776655544443222 2222221221111111 11111111111111 0000000000
Q ss_pred CccchhhhcccCCCCCCCCCCcc-ccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCC
Q 007582 274 NQFRCLDKAAIMPKDSAVAAPWR-VCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTS 352 (597)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 352 (597)
+ ..+. .++..++ .++. +++....... ....+ .....++.. ........ ....
T Consensus 306 -------~---~~~~-~~~~~~~~l~~~------~~~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~~-------~~~~ 358 (505)
T TIGR00898 306 -------D---LSSS-KKQYSFLDLFRT------PNLRKTTLCL-MMLWF-TTAFSYYGL-VLDLGNLG-------GNIY 358 (505)
T ss_pred -------h---hhhc-cCCCcHHHHhCC------hHHHHHHHHH-HHHHH-HHHHHHHHH-hccccccC-------CChH
Confidence 0 0000 0000110 1111 1111111110 00000 000001110 00000000 0111
Q ss_pred cccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHH
Q 007582 353 SIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLS 432 (597)
Q Consensus 353 ~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 432 (597)
....+..+..++...+..++.|+++||+. +.++.++++++.++..+.. ....++.+
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~-----------~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~ 414 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYT-----------MAASLLLAGVALLLLLFVP-------------VDLYFLRT 414 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHH-----------HHHHHHHHHHHHHHHHHcC-------------CCchHHHH
Confidence 11122233334444555556666677654 4455555555555444321 11123333
Q ss_pred HHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchh
Q 007582 433 FQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNV 512 (597)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~ 512 (597)
...++.+++.....+..+.+..|.+|.+.|+.++|+.+....+++.+++.+.. +... +.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--------------------~~ 473 (505)
T TIGR00898 415 ALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK--------------------WL 473 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--------------------HH
Confidence 44455556666677788899999999999999999999999999999888777 3211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccCCC
Q 007582 513 NLFYWFLAIVSVLNLVLYLYAAAWYKYKPENC 544 (597)
Q Consensus 513 ~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~ 544 (597)
...+++++++++++.++. ++.||+++++++|
T Consensus 474 ~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 474 FLPLVLFGGLALLAGILT-LFLPETKGVPLPE 504 (505)
T ss_pred hhHHHHHHHHHHHHHHHH-HcCcCCCCCCCCC
Confidence 224677777777666554 4568998887764
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-29 Score=269.46 Aligned_cols=398 Identities=14% Similarity=0.119 Sum_probs=245.5
Q ss_pred hhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHH
Q 007582 51 AGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGS 130 (597)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (597)
.+.+++.++..++..++.+++|+++|| +|||++++++.++..+|+++..+++.. .+...+.++
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~----------------~~~~~~~~~ 108 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSY----------------NNFWMLLIG 108 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccccccccc----------------ccccccccc
Confidence 356889999999999999999999999 899999999999999999999988621 145689999
Q ss_pred HHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec---ccchhHHHHHHHHHHH
Q 007582 131 LYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT---EKSWWLGFLVSSVANF 207 (597)
Q Consensus 131 r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~w~~~f~i~~~~~~ 207 (597)
|+++|+|.|+..+..+.|+.|..|++. |++..++.+....+|..++..++..+.. ..+||+.+.++.+..+
T Consensus 109 R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l 182 (451)
T PF00083_consen 109 RFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSL 182 (451)
T ss_pred ccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999777 9999999999999999988776544432 3459999888776643
Q ss_pred HHHH--HHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccc-cccCCCC--ccchhhhc
Q 007582 208 IGLI--ALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTW-ERIPHAN--QFRCLDKA 282 (597)
Q Consensus 208 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~-~~~~~~~--~~~~~~~~ 282 (597)
+..+ .+++++|+| +..+++.+++.+. .+.+..+ +.+..+..
T Consensus 183 ~~~~~~~~~pESP~w----------------------------------L~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~ 228 (451)
T PF00083_consen 183 LVLLLRFFLPESPRW----------------------------------LLSKGRDEEAEKVLRKLRGKEIEDEEIEEIK 228 (451)
T ss_pred cccccccccccccce----------------------------------ecccccccccccccccccccccccccccccc
Confidence 3322 233334444 4333333333222 2211100 00000000
Q ss_pred ccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHH
Q 007582 283 AIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFM 362 (597)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 362 (597)
....+....+..|+.+.+... .+++++..+.+...+...+.....++...+.+..+.+.. ..........+.+..
T Consensus 229 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~ 303 (451)
T PF00083_consen 229 AEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS----FLATLILGLVNFLGT 303 (451)
T ss_pred cccccccccceeeeecccccc-ccccccccccccccccccccccccccccccccccccccc----ccccccccccccccc
Confidence 000000000122322211111 234444444444445444444444444443333333222 112222333334444
Q ss_pred HHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHH
Q 007582 363 SILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIAD 442 (597)
Q Consensus 363 i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 442 (597)
++...++|+ ++||.. +..+.++++++++..+.... . ..+.. ...+...++...++.....
T Consensus 304 ~~~~~~~~~----~GRr~~-----------~i~~~~~~~~~~~~~~~~~~-~--~~~~~--~~~~~~~i~~~~l~~~~~~ 363 (451)
T PF00083_consen 304 LLAIFLIDR----FGRRKL-----------LIIGLLLMAICSLILGIIFF-L--GVSSS--SWWSILSIVFLALFFAFFS 363 (451)
T ss_pred ccccccccc----cccccc-----------cccccccccccccccccccc-c--ccccc--cccccccceeeeecccccc
Confidence 444444444 488864 33556666665555541000 0 00000 0112223333333444555
Q ss_pred HHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHH
Q 007582 443 MFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIV 522 (597)
Q Consensus 443 ~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~ 522 (597)
..+.+..+.+..|.+|.+.|+.+.++....+++++++++.+.+.+.... + ....|++++++
T Consensus 364 ~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~--------~-----------~~~~~~i~~~~ 424 (451)
T PF00083_consen 364 LGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL--------G-----------GWGVFLIFAGV 424 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--------c-----------ccccchhhHHH
Confidence 5677888899999999999999999999999999998888776653211 1 11247788888
Q ss_pred HHHHHHHHHHhhcccccccCCCCCCCC
Q 007582 523 SVLNLVLYLYAAAWYKYKPENCSDIKP 549 (597)
Q Consensus 523 ~~~~~v~~~~~~~~~~~~~~e~~~~~~ 549 (597)
+++..++.+++.||||++++||+++.|
T Consensus 425 ~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 425 CLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred HHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 888888888999999999999988654
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-22 Score=214.31 Aligned_cols=172 Identities=16% Similarity=0.123 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHcccccC---CchhhHHHHHHHH---HHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 19 FVFVFSALENMGFIANGISMVLYFKNEMH---FDLAGASNTLTNF---FGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 19 ~~~~~~~~~~~~~~~v~~~~~~yl~~~l~---~~~~~~~~i~~~~---~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
...+..+++.+.++ +.+++.+++.++++ .+..+.+.+.+.+ .++..++.+++|+++|| +|||+++.++.+++
T Consensus 26 ~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~ 103 (432)
T PRK10406 26 GASSGNLVEWFDFY-VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHH
Confidence 33344556655544 57778888888874 4555444444444 44444899999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++++++++++++.... ..+...+++.|+++|+|.|+..+...++++|.+|+++ |++..++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~ 166 (432)
T PRK10406 104 CFGSLVIACLPGYETIG-----------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQY 166 (432)
T ss_pred HHHHHHHhhcCCchhHH-----------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHH
Confidence 99999998876432100 1134578999999999999999999999999999776 899999988
Q ss_pred HHHHHHHHHHhhhheeee--------cccchhHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVF--------TEKSWWLGFLVSSVANFIG 209 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~--------~~~~w~~~f~i~~~~~~~~ 209 (597)
.+.+.|..+++.+...+. ..+|||++|++.+++.++.
T Consensus 167 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 167 VTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 888888888876544332 2579999999877665443
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-22 Score=202.87 Aligned_cols=185 Identities=14% Similarity=0.041 Sum_probs=166.4
Q ss_pred chhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH
Q 007582 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
+.+++..+..++.+....|+-...=|...+.+ +-+.+++|.+..++|+.++.|..+..++.|+-..++|| +.||++++
T Consensus 5 ~~~~~~~~~~l~aLa~~~F~igttEfv~~gLL-p~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl 82 (394)
T COG2814 5 ATARKPMWLALLALALAAFAIGTTEFVPVGLL-PPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLL 82 (394)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHhch-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHH
Confidence 34456678888888888888888878555544 56688999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
....++++|.+++++++ ++.+++++|++.|+..|.+.+...+..+++.|+++ |++
T Consensus 83 ~~l~lFi~~n~l~alAp-------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~ 137 (394)
T COG2814 83 GLLALFIVSNLLSALAP-------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGR 137 (394)
T ss_pred HHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhh
Confidence 99999999999999997 56799999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
+++....+.+++..+|..++.++.+.+|||..|++-..+.+++++......|
T Consensus 138 Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 138 ALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999988887777777666555
|
|
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=226.76 Aligned_cols=366 Identities=27% Similarity=0.434 Sum_probs=237.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhh
Q 007582 82 FATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGA 161 (597)
Q Consensus 82 ~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~ 161 (597)
.|++++|.+++++|.++++++...+.. ++..+...++++..+.++|.|+++|++.++++||+++++ +
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~----------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~---~ 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL----------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD---D 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT---T
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh----------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc---h
Confidence 379999999999999998887654432 112345789999999999999999999999999999774 3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeec-CCCCChhHH-HHHHHHH
Q 007582 162 KALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQ-QPGESPLVR-VAQVLVV 239 (597)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 239 (597)
++|.++++++|+++|+|+.+++...+++.++++|.+.|.++.+.+++++++++.+++++.+. ++.+++..+ ...+...
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 147 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA 147 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999998887 677777766 3334444
Q ss_pred HHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccc-cccchhHHHHHHHhHhhHHHH
Q 007582 240 AIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRV-CTVTQVEEVKILTRMMPILAS 318 (597)
Q Consensus 240 ~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 318 (597)
+.+++....|....++.+.....+.... .+.....+......... ..|.. ...+++++.+.+.+.+..+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~k~~~~~~~~~~~ 219 (372)
T PF00854_consen 148 AFKKRKLAVPKGSSWLDWALFQYSERSI-----FGIIVFIRAAVIFFPEI---FFWALFCQVQRVEELKALIRFLPIFLF 219 (372)
T ss_dssp HHHHHCCCH-HHHHHHHHHHHHHCCCCC-----CCCCCHHHHHHHHCCCH---HHHTTTSSTTTHHHCCHHHCHHHCCCH
T ss_pred HHHHhhcccccchHHHHHhhhhhhhhhh-----hhhhhhccchhhhhhhh---hhcccCCccceeeeeeeeeeccccCeE
Confidence 4555544444323333332111110000 00000000000000000 00100 112334444555555565556
Q ss_pred HHHhHhhhcccchhHHhhhhhcCCCCCc-ccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHH
Q 007582 319 TILMNTCLAQLQTFSITQGAAMDPHLGS-IKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGL 397 (597)
Q Consensus 319 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~ 397 (597)
...+.....+..+....+...++....+ +.++++.++.+|++.++++.|+.|++++|+.|+.. ..+.+.++.+|+
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~----~~~~~~k~~~G~ 295 (372)
T PF00854_consen 220 WIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI----QPSPPQKFGIGM 295 (372)
T ss_dssp HHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH-
T ss_pred EEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc----cchhhhhhhHHH
Confidence 6666666677766777776666655666 78999999999999999999999999999888332 368999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHH
Q 007582 398 VLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLS 474 (597)
Q Consensus 398 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~ 474 (597)
+++.++++..+.++..+.....+.+ ..+.+|+++.+++..++|....+...+..+|.+|++..+..+|+++....
T Consensus 296 ~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~~ 370 (372)
T PF00854_consen 296 VFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALSA 370 (372)
T ss_dssp HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHhc
Confidence 9999999999888765544443332 23447778999999999999999999988888888888888888776543
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-22 Score=213.18 Aligned_cols=173 Identities=13% Similarity=0.099 Sum_probs=154.1
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
+..+| ++++...++.+.+.+.+.++++.|+.+++|.+..+.|.+.+.+.+...+..+++|+++|| +|||+++.++.+
T Consensus 8 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~ 84 (400)
T PRK11646 8 RNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGML 84 (400)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHH
Confidence 45566 667899999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.+++..++ +.+.+++.|+++|++.+...|...+++.|.+|+++ |++.+++
T Consensus 85 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~ 139 (400)
T PRK11646 85 MRAAGFATMAIAH-------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSL 139 (400)
T ss_pred HHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 9999998887664 45678999999999999999999999999998655 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
.+...++|..+||.+++++. .++|++.|++.+...++..++
T Consensus 140 ~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 140 LMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887 679999999877665554433
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=212.17 Aligned_cols=156 Identities=13% Similarity=0.109 Sum_probs=137.4
Q ss_pred hHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 007582 34 NGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC 113 (597)
Q Consensus 34 v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~ 113 (597)
..+...+++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++++.+.
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 44455567888999999999999999999999999999999999 8999999999999999998888775
Q ss_pred CCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeccc
Q 007582 114 GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEK 193 (597)
Q Consensus 114 ~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 193 (597)
+.+.++++|++.|++.+...+....+++|.+|+++ |++.+++.+...++|..+++.+++++.+..
T Consensus 81 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 81 ---------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred ---------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 46689999999999999999999999999999555 999999999999999999999999888888
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 007582 194 SWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 194 ~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
+|++.|.+.+++.++..++.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 146 SWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred CchHHHHHHHHHHHHHHHHhhh
Confidence 9999999877765555544433
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=213.71 Aligned_cols=166 Identities=11% Similarity=0.040 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~ 97 (597)
+..++..++..+..+.+...+ +.+.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++..++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAM-PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHH
Confidence 334444444444444444444 45556799999999999999999999999999999999 8999999999999999998
Q ss_pred HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH
Q 007582 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV 177 (597)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (597)
+++.+. +.+.+++.|++.|++.|...+...+++.|.+|+++ |++.+++++.+.++
T Consensus 104 ~~~~~~-------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~ 158 (434)
T PRK11663 104 LFGFSS-------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNV 158 (434)
T ss_pred HHHHHh-------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHH
Confidence 888775 45678889999999999999999999999999655 99999999999999
Q ss_pred HHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 178 AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 178 g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
|..+++.+++++.+.++||+.|++.+++.++..
T Consensus 159 g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 159 GGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999999999888888899999988776644443
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-21 Score=209.16 Aligned_cols=177 Identities=18% Similarity=0.141 Sum_probs=128.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHccccc--CCchhhHHHHH-----HHHHHHHHhHhhhhHHHhhhccchhHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEM--HFDLAGASNTL-----TNFFGSTFLLCLVGGFISDTFLSRFAT 84 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l--~~~~~~~~~i~-----~~~~~~~~~~~~~~G~l~D~~~Gr~~~ 84 (597)
.++|......+..+++.+.........+.++.+++ +.++. .+++. ++..++..++.++.|+++|| +|||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHH
Confidence 34566666666777776665543333444555544 55555 34443 23345566778889999999 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh
Q 007582 85 CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL 164 (597)
Q Consensus 85 i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r 164 (597)
+.++.+++.++++++++++++.... .....++++.|+++|++.|+..+....++.|.+|+++ |
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 159 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIG-----------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------K 159 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHH-----------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------C
Confidence 9999999999999999886532100 0112358889999999999999999999999999766 8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhheeee--------cccchhHHHHHHHHHHH
Q 007582 165 ASYFNFYLLATTVAAVIGVTGIVYVF--------TEKSWWLGFLVSSVANF 207 (597)
Q Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~w~~~f~i~~~~~~ 207 (597)
++..+..+.+..+|..++..+...+. ..++||++|++..++.+
T Consensus 160 g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 160 AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 99999988888999888876554432 25799999998766543
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=218.80 Aligned_cols=399 Identities=11% Similarity=0.029 Sum_probs=239.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
+..++...++..+... +.....+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||++++++.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDST-IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHH
Confidence 4444555555544444 55556667788899999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
++++.++ +...++++|+++|++.|...+...+++.|.+|+++ |++.+++++....
T Consensus 82 ~~~~~~~-------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 136 (485)
T TIGR00711 82 LLCGVAP-------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVL 136 (485)
T ss_pred HHHhCcC-------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHH
Confidence 9888765 45689999999999999999999999999999555 9999999999999
Q ss_pred HHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHH------HHHHHHHHhcCCCCCC
Q 007582 177 VAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVA------QVLVVAIKNRKLSLPD 250 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~p~ 250 (597)
+|..++|.+++++.++++||+.|++..++.++..++.+...++...++.++.+..... ..+.....+.......
T Consensus 137 ~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~ 216 (485)
T TIGR00711 137 VAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWF 216 (485)
T ss_pred HHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 9999999999999888999999998777665555544444333211111111111100 0011111111110000
Q ss_pred CchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccc
Q 007582 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQ 330 (597)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (597)
++.+...... .... .. ..+..+. ...+. ...+++.++. +.....................+.
T Consensus 217 ~~~~~~~~~~-~~~~---~~-----~~~~~~~-~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T TIGR00711 217 DSNEILILSI-TGLV---AI-----IAFVVWE-LTDDN--PLVDLRLFKY------RNFTIGCVYMSLLGLGLYGSFYLL 278 (485)
T ss_pred CchHHHHHHH-HHHH---HH-----HHHHHHH-HcCCC--CccCHHHHcC------CChHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000 00 0000000 00000 0000111111 111111111111111111111111
Q ss_pred hhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007582 331 TFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLV 410 (597)
Q Consensus 331 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~ 410 (597)
..+.....+.+.. ..+.......+..++..++..++.|+++||+. +.+|..+.+++..+..+.
T Consensus 279 p~~~~~~~g~s~~------~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-----------~~~g~~~~~~~~~~~~~~ 341 (485)
T TIGR00711 279 PLYLQQVLGYTAL------QAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL-----------VTIGLILYAVGFYWRAFT 341 (485)
T ss_pred HHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH-----------HHHHHHHHHHHHHHHhcc
Confidence 1222222222211 12333344456666677777777666665542 455666666655544421
Q ss_pred HHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 411 EVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~ 488 (597)
. . ...+.+.++...++.+++.+...++......+..|++.|+.++++.++.+.+++.+++.+.+.+.
T Consensus 342 ~-------~----~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 342 F-------T----PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred C-------C----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 12344455555777888888888777888888999999999999999999999999988887653
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-22 Score=210.82 Aligned_cols=167 Identities=10% Similarity=0.082 Sum_probs=144.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
.+++....+.+..+...+..+. ..++.+++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFML-IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHH
Confidence 3456666666666666666554 4556667788999999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++.++++++. +.+.++++|+++|+|.|...+....++.|.+|+++ |++..+++
T Consensus 93 ~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~ 147 (426)
T PRK12307 93 YSVGTGLSGLAS-------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFL 147 (426)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHH
Confidence 999999888875 46689999999999999999999999999999665 99999999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHH
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVA 205 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~ 205 (597)
+.+..+|.++++.+.+++.+..+||+.|++....
T Consensus 148 ~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 148 VSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 9999999999998888888888999999875543
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-22 Score=209.54 Aligned_cols=172 Identities=13% Similarity=0.140 Sum_probs=147.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
+.+|+.+..+.+..++..+..+.+ +...+.+.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLV-ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 456777788888888887777754 445556788999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.++++.+. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++
T Consensus 86 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 140 (405)
T TIGR00891 86 LFSAGTLACGFAP-------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASGL 140 (405)
T ss_pred HHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHHH
Confidence 9999998888765 45678999999999999999999999999999766 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccc--hhHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKS--WWLGFLVSSVANFIG 209 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~--w~~~f~i~~~~~~~~ 209 (597)
++...++|..+++.+++.+.+..+ ||+.|.+.++..++.
T Consensus 141 ~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 141 LISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 999999999999998887766555 999998766554443
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-21 Score=205.37 Aligned_cols=175 Identities=15% Similarity=0.114 Sum_probs=140.7
Q ss_pred CchhHHHHHHHHHHHHHHH---HHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGF---IANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~ 89 (597)
+++..+..+...+.+...+ ..+.+.+ +.+.+++|.+..+.++..+.+.++..++.++.|+++|| +|||+.+.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGM-LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcch-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHH
Confidence 4555555555555554433 3344433 34567899999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++..++.+++..++ +.+.+++.|+++|++.+...+...+++.|.+|+++ |.+..+
T Consensus 86 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 140 (406)
T PRK15402 86 AFFILTCLAILLAQ-------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA 140 (406)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence 99999888877765 45678899999999999988989999999998665 788888
Q ss_pred HHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+.+....+|..++|.+++++.+..+||+.|++.+++.+++.+...
T Consensus 141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 888778889999999988887888999999887777665554443
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-22 Score=205.73 Aligned_cols=358 Identities=10% Similarity=0.014 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVML 99 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~ 99 (597)
++...++..++.......++.|.. +++.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHH
Confidence 456666776776666666666665 478899999999999999999999999999999 899999999999988888887
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAA 179 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (597)
..+...+ ..+.+.++++|++.|++.+...+...++++|.+|+++ |++.+++.+...++|.
T Consensus 82 ~~~~~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~ 141 (365)
T TIGR00900 82 PFVALLG--------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLFY 141 (365)
T ss_pred HHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHHH
Confidence 7665211 1256789999999999999999999999999999554 9999999999999999
Q ss_pred HHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhh
Q 007582 180 VIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEIN 259 (597)
Q Consensus 180 ~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 259 (597)
.++|.+++++.+..+|++.|++..+..+++.++.+...++... ++++++. + +....+
T Consensus 142 ~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~--~~~~~~-- 198 (365)
T TIGR00900 142 IVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELA-ASEIQAL------------------S--NAVLRD-- 198 (365)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCC-Ccccccc------------------c--hhHHHH--
Confidence 9999999998888899999988776655554433322211000 0000000 0 000000
Q ss_pred hhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhc-ccchhHHhhhh
Q 007582 260 EKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLA-QLQTFSITQGA 338 (597)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~s~~~~~~~ 338 (597)
..+ .++ .....+.+.................. .....+..+..
T Consensus 199 ------------------~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 199 ------------------TRE-------------GIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred ------------------HHh-------------HHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 000 000 00000111111111111111111111 11122222112
Q ss_pred hcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 339 AMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAF 418 (597)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~ 418 (597)
+.+.. ..+.......+..++..++..++.++.+||+ .+..+.++.++++....+..
T Consensus 243 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~------- 298 (365)
T TIGR00900 243 GRGST------HYGWVLAAFGLGALLGALLLGLLGRYFKRMA-----------LMTGAIFVIGLAILVVGLTP------- 298 (365)
T ss_pred CCchH------HHHHHHHHHHHHHHHHHHHHHHHHHHhchhH-----------HHHHHHHHHHHHHHHHHhhc-------
Confidence 22211 1222333344455555555555544444333 23344444555544443321
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007582 419 NETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINA 489 (597)
Q Consensus 419 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~ 489 (597)
+ +.+...+..++.+++.....+....+..+.+|++.|+++.++.+....++..+++.+.+.+.+
T Consensus 299 ------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 ------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 244556667788888888899999999999999999999999999999999999988877643
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-21 Score=203.55 Aligned_cols=174 Identities=11% Similarity=0.047 Sum_probs=151.6
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHH
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~ 89 (597)
.|..|+....+.+..++.....|...+.++. +.+++|.++.+.++.++.+.++..++.++.|+++|| +|||+++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHH
Confidence 4557887777777777777777766666655 567899999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++..++.+++..++ +.+.+++.|+++|++.|...+..++++.|.+|+++ |++..+
T Consensus 93 ~~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~ 147 (394)
T PRK10213 93 VLLTLSCLLVSFAN-------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALS 147 (394)
T ss_pred HHHHHHHHHHHHHC-------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHH
Confidence 99999998887764 56789999999999999999999999999998665 999999
Q ss_pred HHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
+...+.++|..++|.+++++.+.++||+.|++..++.++..
T Consensus 148 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 148 VIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999988776554443
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-21 Score=207.61 Aligned_cols=379 Identities=13% Similarity=0.049 Sum_probs=236.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhh-----HHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAG-----ASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~-----~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
.|....++...++..++++...+.++.|++ ++|.+..+ .+++.+++.++..++.++.|+++|| +|||+.+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~ 90 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHH
Confidence 345666667788888888888888888875 47877554 4788899999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..++.+++.... +.+.+++.|++.|++.+ ..+....++.|.+|+++ |++..
T Consensus 91 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~ 144 (408)
T PRK09874 91 ALGMGIVMVLMGLAQ-------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWAL 144 (408)
T ss_pred HHHHHHHHHHHHHHh-------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHH
Confidence 998888888777654 45678999999999865 45777788889988555 89999
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCC
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (597)
++++...++|..++|.+++++.+..+|+..|++..++.++..++.+...++.. ++.+++
T Consensus 145 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------- 203 (408)
T PRK09874 145 GTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF--QPVSKK------------------- 203 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc--ccccch-------------------
Confidence 99999999999999999998888889999998887766555544433322110 000000
Q ss_pred CCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhh-HHHHHHHhHhhhc
Q 007582 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMP-ILASTILMNTCLA 327 (597)
Q Consensus 249 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~ 327 (597)
+ ... ..+. ++.+++ .+.....+. .......... ..
T Consensus 204 -~-~~~-----------------------~~~~-------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~ 239 (408)
T PRK09874 204 -E-MLH-----------------------MREV-------------VTSLKN-----PKLVLSLFVTTLIIQVATGS-IA 239 (408)
T ss_pred -h-hhH-----------------------HHHH-------------HHhCcC-----CchHHHHHHHHHHHHHHHHH-HH
Confidence 0 000 0000 000000 000100111 1111111100 00
Q ss_pred ccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 007582 328 QLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVA 407 (597)
Q Consensus 328 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~ 407 (597)
.....+.....+ +.. ......+.+..+..+..++..+...++.|+++||+. +..+..+..++++..
T Consensus 240 ~~~~~~~~~~~~-~~~--~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~~~~~~~ 305 (408)
T PRK09874 240 PILTLYVRELAG-NVS--NIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI-----------LITALIFSVLLLIPM 305 (408)
T ss_pred HHHHHHHHHHhc-cch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh-----------HHHHHHHHHHHHHHH
Confidence 111111111111 000 000011112222334445555666666665555542 334444444444333
Q ss_pred HHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 408 GLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDII 487 (597)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i 487 (597)
... .+.+.+....++.+++.....+.......+..|++.|++..++.+....++..+++.+.+.+
T Consensus 306 ~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l 370 (408)
T PRK09874 306 SFV---------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI 370 (408)
T ss_pred HHh---------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHH
Confidence 221 12234444556778888888888888888999999999999999999999999999988876
Q ss_pred hhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 488 NAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYA 533 (597)
Q Consensus 488 ~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 533 (597)
.+.. | +...|++.+++.+++.+..++.
T Consensus 371 ~~~~--------g-----------~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 371 SANY--------G-----------FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred Hhhc--------c-----------hhHHHHHHHHHHHHHHHHHHHH
Confidence 4311 2 2345777787777776655443
|
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=205.59 Aligned_cols=145 Identities=12% Similarity=0.121 Sum_probs=126.5
Q ss_pred HHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 007582 35 GISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCG 114 (597)
Q Consensus 35 ~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~ 114 (597)
...+.+.+.+++|.|..+.+++.+++.++..++.++.|+++|| +|||+++..+..++.++.+++++++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~----------- 95 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYP----------- 95 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCc-----------
Confidence 3345556788999999999999999999999999999999999 8999999999999999999999886
Q ss_pred CCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeccc-
Q 007582 115 KSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEK- 193 (597)
Q Consensus 115 ~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 193 (597)
++..++++|+++|+|.|...+..+.++.|.+| ++ |++.++.+..+.++|..+++.+++++.++.
T Consensus 96 --------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~ 160 (393)
T PRK09705 96 --------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITPWLVQHSE 160 (393)
T ss_pred --------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34578999999999999999999999999886 44 899999999999999999999888876654
Q ss_pred chhHHHHHHHHHH
Q 007582 194 SWWLGFLVSSVAN 206 (597)
Q Consensus 194 ~w~~~f~i~~~~~ 206 (597)
+||..+.+..+..
T Consensus 161 ~w~~~~~~~~~~~ 173 (393)
T PRK09705 161 TWYQTLAWWALPA 173 (393)
T ss_pred CHHHHHHHHHHHH
Confidence 8998876644443
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=200.99 Aligned_cols=348 Identities=17% Similarity=0.145 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~ 97 (597)
+.+....++..+..+...+..+.|. +++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHH
Confidence 3456667778788777777777765 4569999999999999999999999999999999 8999999999999999998
Q ss_pred HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH
Q 007582 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV 177 (597)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (597)
+..... +...++++|++.|++.+...+..+++..|.+|+++ |++.+++.+...++
T Consensus 80 ~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 80 LLAFAS-------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 888764 46689999999999999999999999999999766 99999999999999
Q ss_pred HHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhh
Q 007582 178 AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYE 257 (597)
Q Consensus 178 g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 257 (597)
|..+++.+++.+.+..+|+..|++...+.++..++.....
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 174 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL---------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 9999999999888888899999988777665554433211
Q ss_pred hhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhh
Q 007582 258 INEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQG 337 (597)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~ 337 (597)
|+....................+...+..+.
T Consensus 175 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (352)
T cd06174 175 -------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEV 205 (352)
T ss_pred -------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 0000011111111111111111111121111
Q ss_pred hhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 338 AAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNA 417 (597)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~ 417 (597)
.+.+ ....+.......+..++..++..++.|+.+||+. .+..+..+..++.+.....
T Consensus 206 ~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~~~~~~------- 262 (352)
T cd06174 206 LGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL----------LLLIGLLLAALGLLLLALA------- 262 (352)
T ss_pred cCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHHHHHHHHHHHHh-------
Confidence 1111 1122334445556666667777777666666540 2556677777766665543
Q ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 007582 418 FNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPS 497 (597)
Q Consensus 418 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~ 497 (597)
.+.+.+....++.+++.....+....+..+..|++.|++.+++......+++.+++.+.+.+.+
T Consensus 263 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-------- 326 (352)
T cd06174 263 --------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-------- 326 (352)
T ss_pred --------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 1245666778888999999999999999999999999999999999999999999999887743
Q ss_pred CCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 007582 498 KQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYL 531 (597)
Q Consensus 498 ~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~ 531 (597)
+.+|. ..|++.+++.+++.++++
T Consensus 327 ~~~~~-----------~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 327 TGGYG-----------GVFLILAALALLAALLLL 349 (352)
T ss_pred ccCcc-----------hHHHHHHHHHHHHHHHhe
Confidence 12333 347777777777666543
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-21 Score=203.16 Aligned_cols=175 Identities=15% Similarity=0.106 Sum_probs=143.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++....++...++..+.. .......+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDL-AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHH
Confidence 3444444444555444443 355556677788899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++...+. +.+.+++.|++.|++.+...+...++++|.+|+++ |++.+++++
T Consensus 93 ~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 147 (398)
T TIGR00895 93 SVFTLLCALAT-------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMF 147 (398)
T ss_pred HHHHHHHHHcc-------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHh
Confidence 88888877664 45678899999999999999999999999998655 999999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.+.++|..+++.+++++.+..+|+..|.+.+++.++..++..
T Consensus 148 ~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 148 CGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred hHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 999999999999999888888999999887555444443333
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-20 Score=197.09 Aligned_cols=177 Identities=8% Similarity=0.030 Sum_probs=148.2
Q ss_pred ccchhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHH
Q 007582 5 VENIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFAT 84 (597)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~ 84 (597)
..|.+|-+.||++.......++..++.+....++++++ +++|.+..+.+++.+.+.++..++.++.|+++|| +||||+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~ 80 (402)
T TIGR00897 3 INNLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKT 80 (402)
T ss_pred cccHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHH
Confidence 35778899999999999999999999988888898888 5689999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh
Q 007582 85 CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL 164 (597)
Q Consensus 85 i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r 164 (597)
+..+.++..++.+++..... . ..+...+++.|++.|+|.+...+...+++.+.+|+++ |
T Consensus 81 l~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~ 139 (402)
T TIGR00897 81 MMIGLLLWCVGHAAFIVFGL-G--------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------L 139 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhc-c--------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------H
Confidence 99999999888766543211 0 1145677889999999998888888888899988655 9
Q ss_pred hhHHHHHHHHHHHHH-HHHhhhheeeecccchhHHHHHHHH
Q 007582 165 ASYFNFYLLATTVAA-VIGVTGIVYVFTEKSWWLGFLVSSV 204 (597)
Q Consensus 165 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~w~~~f~i~~~ 204 (597)
++.+++++.+.++|. .++|.+++++.+..||+..++....
T Consensus 140 g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 140 SSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 999999999999996 5788888888777887655554433
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-20 Score=197.87 Aligned_cols=176 Identities=14% Similarity=0.074 Sum_probs=146.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++..+.+....+....+.....+.+ +++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+.+.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAF-PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHH
Confidence 34455555555555555555444444 55678899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.+++..++ +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+
T Consensus 81 ~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 135 (385)
T TIGR00710 81 ALSSLGLALSN-------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILM 135 (385)
T ss_pred HHHHHHHHHHc-------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHH
Confidence 99998887765 45678999999999999999999999999999655 999999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
...++|..+++.+++++.+..+|+..|++..+..++..++...
T Consensus 136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888889999998877765555544443
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=204.12 Aligned_cols=171 Identities=13% Similarity=0.045 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.....+...+.. ...| ..+.+.+++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..+
T Consensus 4 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 4 YVLVGTVIMCFTS-GYVY-TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGL 80 (377)
T ss_pred EEeHHHHHHHHHh-hHHh-hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHH
Confidence 3344333333333 2344 34556778889999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++++.++ +.+.++++|++.|++.|...+.......|.+| ++ |++..++...+
T Consensus 81 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~ 134 (377)
T TIGR00890 81 GFTFYAIAD-------------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGG 134 (377)
T ss_pred HHHHHHHHH-------------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHh
Confidence 999888876 56689999999999999888888888888886 33 89999999999
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.++|..+++.+.+.+.+..+||+.|++..++.++..++.+
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 135 YGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred cchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999887666655555667999999988777655544443
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-21 Score=199.54 Aligned_cols=158 Identities=10% Similarity=0.007 Sum_probs=124.9
Q ss_pred HHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 007582 32 IANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPP 111 (597)
Q Consensus 32 ~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~ 111 (597)
+...+...+.+.+++|.+..+.+++.+.+.++..++.+..|+++|| +|||+++..+......+.+ .....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~-~~~~~-------- 76 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAG-RLLDP-------- 76 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHH-HHHHh--------
Confidence 3455566677788999999999999999999999999999999999 8999887655544444432 22221
Q ss_pred CCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec
Q 007582 112 DCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (597)
.+...++++|+++|+|.|.. +......+|.+|+++ |++.+++.+.+..+|..+++.+++++.+
T Consensus 77 ----------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~ 139 (368)
T TIGR00903 77 ----------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYT 139 (368)
T ss_pred ----------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 15678999999999999864 555566799999655 9999999999999999999999999988
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 192 EKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 192 ~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
.++||+.|.+.+++.++..+++...
T Consensus 140 ~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 140 AGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999988766655554444433
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-21 Score=200.11 Aligned_cols=173 Identities=14% Similarity=0.092 Sum_probs=150.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
++.++.+++..++.....+...+.++. +.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHH
Confidence 567888888888888888877776654 567899999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++.++++.++ +.+.++++|++.|++.|...+..++++.|.+|+++ |++.++++..
T Consensus 80 ~~~~l~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 134 (382)
T PRK10091 80 IGNAMFTLSS-------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVS 134 (382)
T ss_pred HHHHHHHHhC-------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHH
Confidence 9999888875 56789999999999999988888899999988554 8899999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
+..+|..+++.+++++.+..+||+.|.+.+++.++..+..
T Consensus 135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888888899999999877655544433
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-22 Score=212.94 Aligned_cols=179 Identities=7% Similarity=-0.087 Sum_probs=137.5
Q ss_pred hhHHHHHHHHHHHHHHHHH---hHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIA---NGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~---v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
|..+.++...++..+..|. ..+.+.+.+.+++|.+..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~ 103 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHH
Confidence 3344444444444444443 23344667888999999999999999999999999999999999 8999999999888
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++.++.+...... ..+...+++.|+++|++.|...|....+++|.+|+++ |++.++++
T Consensus 104 ~~~~~~~~~~~~~~~--------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~ 163 (467)
T PRK09556 104 SAICMLGFGASLGSG--------------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFW 163 (467)
T ss_pred HHHHHHHHHHHHhcc--------------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEee
Confidence 887777666532100 1267789999999999999999999999999999776 99999999
Q ss_pred HHHHHHHHHHHhhhheeeeccc---chhHHHHHHHHHHHHHHHHHH
Q 007582 172 LLATTVAAVIGVTGIVYVFTEK---SWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~---~w~~~f~i~~~~~~~~~~~~~ 214 (597)
..+.++|..+++.+..++.... +|+..|.+.+++.++..++.+
T Consensus 164 ~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 164 NISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred ecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 9999999999988776554432 588888877666554444433
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-21 Score=203.18 Aligned_cols=176 Identities=13% Similarity=0.044 Sum_probs=144.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++....+.+.-+++.... ...+++.+.+++++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~-~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDR-INIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhh-hhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHH
Confidence 4555554555444443333 455566678999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++++++++++ +...++++|+++|++.|...|....+++|.+|+++ |++.+++++
T Consensus 84 ~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~~ 138 (412)
T TIGR02332 84 GIASTATMFAT-------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALFM 138 (412)
T ss_pred HHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 99999998875 45689999999999999999999999999999554 999999999
Q ss_pred HHHHHHHHHHhhhheeeec------ccchhHHHHHHHHHHHHHHHHHHh
Q 007582 173 LATTVAAVIGVTGIVYVFT------EKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~------~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.+..+|..+++.+++++.. ..+||+.|.+.++..++..++..+
T Consensus 139 ~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 139 IAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998887642 369999999977665544443333
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-20 Score=197.64 Aligned_cols=169 Identities=13% Similarity=0.013 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHH-HHHHHHHHHHHH
Q 007582 21 FVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLI-FGTLEVLALVML 99 (597)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~-~~~~~~ig~~l~ 99 (597)
++..++..++.....+.++.|+.+++|.+..+.+++.+.+.+...+..++.|+++|| +||||.+++ +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHH
Confidence 455778888888899999999999999999999999999999999999999999999 899887665 444455566666
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh--HHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS--YFNFYLLATTV 177 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~--~~~~~~~~~~~ 177 (597)
+.++ +.+.+++.|+++|.+.+...|...++..|..|+++ |++ ..+..+...++
T Consensus 82 ~~~~-------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 136 (375)
T TIGR00899 82 AWNR-------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQISL 136 (375)
T ss_pred Hhcc-------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHhH
Confidence 6654 45677888999988888888888888888876433 433 35777778899
Q ss_pred HHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 178 AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 178 g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
|..++|.+++++.+..+||+.|++.+++.++..++...
T Consensus 137 g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 137 AWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888889999999987765555544433
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-21 Score=209.55 Aligned_cols=167 Identities=13% Similarity=0.157 Sum_probs=142.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
.+++.+..+....++..+..+ ....+.+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFV-LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 345666666666666655554 44556677788999999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++.++++++. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.++++
T Consensus 95 ~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 149 (496)
T PRK03893 95 FSVGTLACGFAP-------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFL 149 (496)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 999999888765 46689999999999999999999999999999554 89999999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHH
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVA 205 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~ 205 (597)
+...++|..+++.+.+++.+.++||+.|++....
T Consensus 150 ~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 150 ISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 9999999999999999888889999999875443
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-20 Score=202.73 Aligned_cols=147 Identities=9% Similarity=-0.005 Sum_probs=128.3
Q ss_pred ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhH
Q 007582 45 EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIA 124 (597)
Q Consensus 45 ~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (597)
+++++..+.+.+.+.+.++..++.+++|+++|| +|||+++.++.++..++.+++..+.. .+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 131 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAG-----------------GGI 131 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHH-----------------cCc
Confidence 688999999999999999999999999999999 89999999999999888887765431 134
Q ss_pred HHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc-cchhHHHHHHH
Q 007582 125 AYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE-KSWWLGFLVSS 203 (597)
Q Consensus 125 ~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~w~~~f~i~~ 203 (597)
..+++.|+++|++.|...+....+++|.+|+++ |++.+++++.+.++|..+++.+++++.+. .+||++|++.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 578999999999999999999999999999665 99999999999999999999999988877 49999999987
Q ss_pred HHHHHHHHHHHh
Q 007582 204 VANFIGLIALAA 215 (597)
Q Consensus 204 ~~~~~~~~~~~~ 215 (597)
++.++..++++.
T Consensus 206 ~~~~~~~~~~~~ 217 (465)
T TIGR00894 206 IVGCAWSLLWFV 217 (465)
T ss_pred HHHHHHHHHHHH
Confidence 776555544443
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-20 Score=204.11 Aligned_cols=174 Identities=11% Similarity=0.113 Sum_probs=132.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+++.+.......++..+..+++. .+.+++.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAA-PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHH
Confidence 44555555555555555555444 34457788999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++++.+. +...+++.|+++|++.+... ....+++|.+|+++ |++.+++.+
T Consensus 112 ~~~~~~~~~~~-------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~g~~~ 165 (476)
T PLN00028 112 APAVFCMSLVS-------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTANGIAA 165 (476)
T ss_pred HHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHHHHHH
Confidence 99888887765 45578889999999988654 35567899999665 999999988
Q ss_pred HHHHHHHHHHhhhheeee---------cccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVF---------TEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~---------~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...++|..+++.+.+.+. ...+||+.|++.+++.++..++.+
T Consensus 166 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 166 GWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 777777777765543321 125899999998777655544433
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-20 Score=199.35 Aligned_cols=173 Identities=15% Similarity=0.052 Sum_probs=126.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHH-HHHHHH-----HHhHhhhhHHHhhhccchhHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTL-TNFFGS-----TFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~-~~~~~~-----~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
.++....++...+++.+-.. ....+.+.+.++++.++.+.+... +....+ ..++.++.|+++|| +|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFF-LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHH
Confidence 34555555556666655544 455677788888988777654433 222222 23578899999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
++.+++.++++++++++++..+. .....+++++|+++|++.|...+..+.+++|.+|+++ |++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~ 153 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIG-----------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGF 153 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHH-----------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chH
Confidence 99999999999999876432100 0001257899999999999999999999999999776 999
Q ss_pred HHHHHHHHHHHHHHHHhhhheee--------ecccchhHHHHHHHH
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYV--------FTEKSWWLGFLVSSV 204 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~w~~~f~i~~~ 204 (597)
.++++....++|..+++.+++.+ .+.++||++|++.+.
T Consensus 154 ~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 154 YTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99998888777777776665543 246799999987544
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-20 Score=202.69 Aligned_cols=175 Identities=10% Similarity=0.022 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHh---HHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIAN---GISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v---~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.++...++....+|.. .+...+|+.++ |++..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHH
Confidence 33333344444444433 34555678887 9999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++++++... ..+...+++.|++.|++.|...+.....+.|.+|+++ |++.+++++.+
T Consensus 106 ~~~~~~~~~~~---------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 164 (452)
T PRK11273 106 VMLFMGFVPWA---------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA 164 (452)
T ss_pred HHHHHHhhhcc---------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHH
Confidence 98888776321 1245678899999999999998888888999998655 99999999999
Q ss_pred HHHHHH-HHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 175 TTVAAV-IGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 175 ~~~g~~-~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.++|.. .+|+.+..+....+||+.|++.+++.++..++.+.
T Consensus 165 ~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 165 HNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 998864 45554322323348999999877665554444333
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=202.84 Aligned_cols=166 Identities=19% Similarity=0.271 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 007582 21 FVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLT 100 (597)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~ 100 (597)
++..++..+....+...++.++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhh
Confidence 445566666666666666668899999999999999999999999999999999999 8999999999999999966655
Q ss_pred HHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHH
Q 007582 101 IQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAV 180 (597)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (597)
++. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..
T Consensus 81 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~ 135 (352)
T PF07690_consen 81 FAS-------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI 135 (352)
T ss_dssp HHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred hhh-------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence 543 34489999999999999999999999999999876 99999999999999999
Q ss_pred HHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 181 IGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 181 ~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
++|.+++++.+..+||+.|++.+++.++..++
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999988899999999988887777654
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-20 Score=197.93 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=130.4
Q ss_pred HcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCC
Q 007582 41 YFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLK 120 (597)
Q Consensus 41 yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (597)
.+.++++.+..+.++.++++.++..++.++.|+++|| +|||++++++.+++.++.++++.++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~----------------- 102 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTT----------------- 102 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcC-----------------
Confidence 4567899999999999999999999999999999999 8999999999999999999888775
Q ss_pred chhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHH
Q 007582 121 GAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFL 200 (597)
Q Consensus 121 ~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~ 200 (597)
+...++++|+++|++.+...+...+++.|.+|+++ |++.++++....++|..++|.+++++.+..+||+.|+
T Consensus 103 --~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~ 174 (413)
T PRK15403 103 --SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFA 174 (413)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 46689999999999998777777888999998655 8899999999999999999999988888889999999
Q ss_pred HHHHHHHHHHHHHHh
Q 007582 201 VSSVANFIGLIALAA 215 (597)
Q Consensus 201 i~~~~~~~~~~~~~~ 215 (597)
+..++.++..++.+.
T Consensus 175 ~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 175 IIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887776666554433
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-20 Score=194.94 Aligned_cols=159 Identities=11% Similarity=0.076 Sum_probs=138.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
..|.++.+++..++..++...+.+.++.|++ ++|.+..+.|++.+.+.++..++.++.|+++|| +|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHH
Confidence 3567888999999999888888888888876 579999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++++.++ +.+.++++|+++|++.+...+...+.+.+..++++ |++.+++++
T Consensus 82 ~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (381)
T PRK03633 82 AAGCAGLGLMV-------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYM 136 (381)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 99998888765 46688999999999999998888888888887544 899999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLG 198 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~ 198 (597)
...++|..+|+.+++++.+...|...
T Consensus 137 ~~~~~g~~~g~~~~~~l~~~~~~~~~ 162 (381)
T PRK03633 137 MVYYLGTVLGQLLVSKVSTELMSVLP 162 (381)
T ss_pred HHHHHHHHHHHHHHhcccccccchHH
Confidence 99999999999999988765433333
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-20 Score=194.39 Aligned_cols=173 Identities=13% Similarity=0.125 Sum_probs=141.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
++|..+.+.+..++.....+..- .+.+.+.+++|++..+.+++.+.+.++..++.+++|++.|| +|||+++.++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTG-MVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 35667766666666655554444 44455678899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++++.++ +...+++.|+++|++.|...+...+++.|.+|+++ |++.++..+
T Consensus 83 ~i~~~l~~~~~-------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 137 (394)
T PRK03699 83 ILAVAGLMFSH-------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFTD 137 (394)
T ss_pred HHHHHHHHHcc-------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHHH
Confidence 99998888764 46678999999999999999999999999998655 889888888
Q ss_pred HHHHHHHHHHhhhheeee-cccchhHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVF-TEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~-~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
...++|..++|.+.+++. +..+||+.|.+..++.++..++
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 138 SFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 888899999988877664 4579999998877665544433
|
|
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-20 Score=193.79 Aligned_cols=181 Identities=16% Similarity=0.118 Sum_probs=132.2
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHH-HHHhHhhhhHHHhhhccchhHHHH-
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFG-STFLLCLVGGFISDTFLSRFATCL- 86 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~G~l~D~~~Gr~~~i~- 86 (597)
..+...+..+...+..++.+++...+.+.++.|+.+++|.+.++.|++.+.+.. +..++++.+|+ +|| +||||.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~ 86 (393)
T PRK15011 9 SAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIV 86 (393)
T ss_pred cchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHH
Confidence 345567778888888999999999999999999999999999999999876544 55566666677 999 89998765
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHH-HHHHHHhccccCcccchhhhcccCCCCCchhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYG-SLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALA 165 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~ 165 (597)
.+.++..++.++.+++. +.+.+++ ++++.+++ +...|....+..|..++++ + ..+
T Consensus 87 ~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~~ 142 (393)
T PRK15011 87 FCCLLGVLACTLFAWNR-------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG---R-EAV 142 (393)
T ss_pred HHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc---c-hHH
Confidence 44555556666666654 3444444 44445554 4667777777777665332 0 123
Q ss_pred hHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 166 SYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
...++.+.+.++|..++|.+++++.+.+|||..|++.++..++..++...
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 45578888999999999999999988889999998887765555444433
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=206.02 Aligned_cols=151 Identities=9% Similarity=0.056 Sum_probs=126.2
Q ss_pred HHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 007582 38 MVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSS 117 (597)
Q Consensus 38 ~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~ 117 (597)
..+.+.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||++++++.++..++.++++.+.
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~-------------- 105 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS-------------- 105 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh--------------
Confidence 3455678899999999999999999999999999999999 8999999999999999998887775
Q ss_pred cCCchhHHHHH-HHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchh
Q 007582 118 CLKGAIAAYFY-GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWW 196 (597)
Q Consensus 118 ~~~~~~~~~~~-~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~ 196 (597)
+.+.++ ..|++.|++.|...+...+++.+.++ ++ |++..++.+.+.++|..++|.+++++.+.+|||
T Consensus 106 -----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr 173 (455)
T TIGR00892 106 -----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWR 173 (455)
T ss_pred -----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChH
Confidence 333454 45789999999876667778888875 33 899999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007582 197 LGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~ 215 (597)
++|++.+++.+++.+..++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988776655544433
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.1e-20 Score=193.54 Aligned_cols=164 Identities=10% Similarity=0.026 Sum_probs=136.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|+++.++...++..++...+...++.. .++++.+..+.+++.+.+.+...++.+++|+++|| +|||++++++.+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHH
Confidence 456677778888877666555444444 67888899999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+++++..+. + .++.|+++|++.+...|+..+++.|++|+++ |++..++....
T Consensus 81 ~~~~~~~~~-------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~ 132 (393)
T PRK11195 81 GCLLMLFGI-------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS 132 (393)
T ss_pred HHHHHHHHH-------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 888776653 1 3788999999999999999999999999655 99999999999
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIG 209 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~ 209 (597)
.++|..+||.+++++.+. .|+..+.+.....+++
T Consensus 133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999988764 4777776665544433
|
|
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-19 Score=191.88 Aligned_cols=175 Identities=10% Similarity=0.065 Sum_probs=144.3
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHH
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~ 89 (597)
+++.+|..+.+....++..+..+...+. .+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~-~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~ 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPA-IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGM 80 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHH
Confidence 3446677776777777776666544444 455678899999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++..++.+++..+. +...+++.|++.|++.+...+....+..|.++.++ |++..+
T Consensus 81 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 135 (394)
T PRK11652 81 SIFILGTLVALFAH-------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANS 135 (394)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHH
Confidence 99999988877764 45678999999999999888888888888887544 888899
Q ss_pred HHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
++..+..+|..++|.+++++.+..+||+.|++.++..++..+
T Consensus 136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888999999987665544433
|
|
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=195.34 Aligned_cols=183 Identities=11% Similarity=0.026 Sum_probs=163.6
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
+.+...+.+..++..+.++++--|.+-. ...-.++.+|.+++..|.+.+.|+++..+++|++|+++|| +.||+++.+|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG 104 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVG 104 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeH
Confidence 3455677788899999999999996655 5566678899999999999999999999999999999999 7999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
..++.++.+.++++. .++++.+.|.+.|+|.+...|.++++++|.+|+.+ |++.+
T Consensus 105 ~~iW~~Av~~~~fs~-------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~ 159 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSN-------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVL 159 (493)
T ss_pred HHHHHHHHHHHHHHH-------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHH
Confidence 999999999999885 56789999999999999999999999999999777 99999
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
+++|+++++|+.+|+.+++++.+..+ ||+.|++.+++.++..++.+...+
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999999999999999987655 999999999888777777665543
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-20 Score=197.60 Aligned_cols=157 Identities=10% Similarity=0.060 Sum_probs=128.5
Q ss_pred HhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 007582 36 ISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK 115 (597)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 115 (597)
....+++.+ +|++..+.+++.+++.++..++.++.|+++|| +|||+.+.++.++..++.++.+..+...
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 115 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWAT--------- 115 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhcccccc---------
Confidence 344567666 59999999999999999999999999999999 8999999999999999888776543211
Q ss_pred CCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhee-eecccc
Q 007582 116 SSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVY-VFTEKS 194 (597)
Q Consensus 116 ~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 194 (597)
.+...+.+.|++.|++.|...+....++.|.+|+++ |++.+++++...++|..+++.+.+. +....+
T Consensus 116 ------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 116 ------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred ------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 145667889999999999999989999999999776 9999999999999999998876654 334568
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 007582 195 WWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 195 w~~~f~i~~~~~~~~~~~~~~ 215 (597)
||..|++.+++.++..++.+.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999987776655444433
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-19 Score=187.52 Aligned_cols=156 Identities=14% Similarity=0.114 Sum_probs=134.4
Q ss_pred HhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 33 ANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 33 ~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
...+.++.+. +++|.+..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..++.+++..++
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 3445555554 5689999999999999999999999999999999 8999999999999999998888765
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 192 (597)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+.
T Consensus 78 ----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 141 (377)
T PRK11102 78 ----------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLVW 141 (377)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999998665 99999999999999999999999988888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 007582 193 KSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 193 ~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.+|++.|++.+.+.++..++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 142 FSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHH
Confidence 89999998877766555444433
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-19 Score=184.48 Aligned_cols=171 Identities=13% Similarity=0.123 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
+.+.....+..-.+.....+ ..+.+.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLV-GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHH
Confidence 33444455555555554444 4455677899999999999999999999999999999999 899999999999999998
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
+++..++ +...++++|+++|++.+...+...+++.|.+|+++ |++..++.+...+
T Consensus 83 ~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 137 (392)
T PRK10473 83 LLCSLAE-------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITC 137 (392)
T ss_pred HHHHHhC-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHH
Confidence 8887764 45578889999999999999999999999998655 9999999999999
Q ss_pred HHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 177 VAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+|..++|.+++.+.+..+|++.|++.+.+.++..++.+
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877778999999887766555544433
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-19 Score=212.43 Aligned_cols=155 Identities=13% Similarity=0.079 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCch--hhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDL--AGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+.+...++..++..++..+....+..++...++.+. ...+++.+++.++..++.+++|+++|| +|||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHH
Confidence 444555556666666665555555556655555543 446899999999999999999999999 89999999998877
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
+++.++..++... .+.+.+++.|+++|++.|...++..++++|.+|+++ |+++++++.
T Consensus 88 ~~~~~~~~~~~~~----------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 145 (1146)
T PRK08633 88 VGLTLLIVLAYYL----------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLLE 145 (1146)
T ss_pred HHHHHHHHHHHHH----------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHHH
Confidence 7776665554321 246789999999999999999999999999999766 999999999
Q ss_pred HHHHHHHHHHhhhheeeecc
Q 007582 173 LATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~ 192 (597)
.+.++|.++|+.+++++...
T Consensus 146 ~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 146 AFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999887654
|
|
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-20 Score=192.75 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=134.1
Q ss_pred hHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 007582 34 NGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC 113 (597)
Q Consensus 34 v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~ 113 (597)
......+++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++++.+.
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~---------- 81 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFST---------- 81 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhh----------
Confidence 34445567888999999999999999999999999999999999 8999999999999999999888875
Q ss_pred CCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh-hhheeeecc
Q 007582 114 GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV-TGIVYVFTE 192 (597)
Q Consensus 114 ~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 192 (597)
+.+.++++|++.|++.|...+...++++|.+|+++ |++.+++.+...++|..+++ .+++.+...
T Consensus 82 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 82 ---------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred ---------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999999665 89999999999999999999 466666667
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 007582 193 KSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 193 ~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.+|++.|++..++.++..++.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHhe
Confidence 89999998877665554444433
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-19 Score=190.19 Aligned_cols=394 Identities=11% Similarity=0.042 Sum_probs=219.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.+.++......++..++++.+.++++.|+.+++|++..+.+.+.+++.++..++.++.|+++|| +|||+++.++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHH
Confidence 3577777788888888888899999999999999999999999999999999999999999999 899999988776665
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++..........+... ........+++++.|.+.....+....+..+ . ..+++..++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~g~~~g~~~~ 148 (420)
T PRK09528 88 VLFGPFFIYVFAPLLQ-----------YNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-------SRRSGFEYGRARM 148 (420)
T ss_pred HHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-------HhhccccchhhHH
Confidence 5543222110000000 0011112233334444333333333333211 1 1126677788888
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCch
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPE 253 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 253 (597)
..++|..++|.+++++.+ .+|+.+|++.+++.++..++.+...++.++++. .+ + .+.++
T Consensus 149 ~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~--~~~~~--- 207 (420)
T PRK09528 149 WGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAK-VA--------------N--ALGAN--- 207 (420)
T ss_pred hhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhh-hc--------------c--chhcc---
Confidence 889999999999888764 589999988776665555444433221110000 00 0 00000
Q ss_pred hhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhH
Q 007582 254 ELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFS 333 (597)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 333 (597)
.+..+..+... .++ .+.+.............+....+....+
T Consensus 208 -------------------~~~~~~~~~~~-------------~l~------~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 249 (420)
T PRK09528 208 -------------------ASAVSLKDALA-------------LLK------LPKFWFLVLYVIGVACFYDVFDQQFPNF 249 (420)
T ss_pred -------------------cccccHHHHHH-------------Hcc------CCCeEeehHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 000 0011111111111111111111222222
Q ss_pred HhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 334 ITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVI 413 (597)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~ 413 (597)
..+... +...+ ....+....++.+...+..++..++.|++++|+. +..+.++.+++.++.++.
T Consensus 250 ~~~~~~-~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~l~~~~~~l~~~~--- 312 (420)
T PRK09528 250 FASFFA-TPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA-----------LLLAGTIMAVRIIGSGFA--- 312 (420)
T ss_pred HHHHHh-ccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-----------hHHHHHHHHHHHHHHHhc---
Confidence 211111 00100 0011223333444455566677777666676543 445566566655554432
Q ss_pred HhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhhhc
Q 007582 414 RRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSF-TYLSLSFGYFLSSAFVDIINAVTK 492 (597)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~-~~~~~~l~~~i~~~~~~~i~~~~~ 492 (597)
.+.++++...++.+++.....+....++.+.+|.+.|+...+. ++....+++.+++.+.+.+.+..
T Consensus 313 ------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~- 379 (420)
T PRK09528 313 ------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI- 379 (420)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 1334455556667777777777778899999999999987665 56667888888888887765421
Q ss_pred ccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 007582 493 RITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAA 534 (597)
Q Consensus 493 ~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~ 534 (597)
||. ..|.+.+++.++..++.++..
T Consensus 380 -------G~~-----------~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 380 -------GFQ-----------GTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred -------Cch-----------HHHHHHHHHHHHHHHHHHHHh
Confidence 333 357777777766665555444
|
|
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-18 Score=182.13 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=131.9
Q ss_pred HHHHHhHHhHH--HHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 29 MGFIANGISMV--LYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSK 106 (597)
Q Consensus 29 ~~~~~v~~~~~--~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~ 106 (597)
.++++...+.+ +.+.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.+++..+.
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~--- 92 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVE--- 92 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhc---
Confidence 33343333333 33678899999999999999999999999999999999 8999999999999988888887764
Q ss_pred cCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 007582 107 NLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
+.+.++++|+++|+|.+...+...+++.|.+|+++ +++.++......++|..++|.++
T Consensus 93 ----------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~ 150 (401)
T PRK11043 93 ----------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLG 150 (401)
T ss_pred ----------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999998888888889999998554 77888888888889999999999
Q ss_pred eeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 187 VYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 187 ~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
+++.+..+||..|++...+.++..++.
T Consensus 151 ~~l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 151 AWLLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 988888899999988777665554443
|
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-18 Score=183.99 Aligned_cols=154 Identities=14% Similarity=0.028 Sum_probs=120.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
++....+..+...-+...+... +...+.+.+++++|.+..+.+++.+.+.++..++.++.|++.|| +|||+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~ 99 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANN-LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLF 99 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHH
Confidence 3334444444444555555554 44444556699999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
++.++.+++..+.. ..++..++++|+++|+|.|...+...+++.|+.|+++ |.+.++.
T Consensus 100 ~~~~~~~l~~~~~~----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~ 157 (438)
T PRK10133 100 LYALGAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNL 157 (438)
T ss_pred HHHHHHHHHHHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHH
Confidence 99999987642211 1256789999999999999999999999999766433 5556888
Q ss_pred HHHHHHHHHHHHhhhhee
Q 007582 171 YLLATTVAAVIGVTGIVY 188 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~ 188 (597)
++....+|..+++.+++.
T Consensus 158 ~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 158 AQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888888877653
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=180.69 Aligned_cols=178 Identities=10% Similarity=0.014 Sum_probs=153.6
Q ss_pred chhHHHHHHHHHHHHHHHHHhHH---hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGI---SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~---~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
.|--+-++...++...+||-+.- ...+++.++.++|.+|.|.+.+.+.+...++-.+.|.++|| .+.|+.+-++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLi 102 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHH
Confidence 34445566667777777775544 45578899999999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..+..+++.+++ +...+.+..++.|+.+|.-.|.+...++..++.++ ||+..++
T Consensus 103 lsai~nil~Gfs~-------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~si 157 (448)
T COG2271 103 LSAIVNILFGFSP-------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSI 157 (448)
T ss_pred HHHHHHHHHhhhh-------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEE
Confidence 9999999999886 45678888999999999999999999999999766 9999999
Q ss_pred HHHHHHHHHHHHhhhh--eeeecccchhHHHHHHHHHHHHHHHHHHhhc
Q 007582 171 YLLATTVAAVIGVTGI--VYVFTEKSWWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~--~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
.+.+-|+|+.+.|.+. +++..+.+||..|++|.++.++..++.+...
T Consensus 158 Wn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 158 WNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred ehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998 8888888999999999988665555554433
|
|
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-18 Score=181.47 Aligned_cols=178 Identities=12% Similarity=-0.001 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+|.+....++...+...+.++++.|+++++|++..+.+++.+++.++..++.++.|+++|| +|||+.++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 567788888999989999999999999999999999999999999999999999999999999 8999999988777665
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+..........+... ......+.+++++.|++.+...+....+..|..++ ++..++.....
T Consensus 81 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~ 141 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQ-----------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKARMF 141 (396)
T ss_pred HHHHHHHHHhhhHHH-----------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchhhhh
Confidence 544322110000000 01233456778899999999999888887775331 34566677777
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
.++|..++|.+++.+.+ .+|+.+|++...+.++..++.
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence 89999999999887754 599999988877655554443
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-18 Score=208.23 Aligned_cols=179 Identities=11% Similarity=0.030 Sum_probs=125.3
Q ss_pred chhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCch-hhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHH
Q 007582 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDL-AGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATC 85 (597)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i 85 (597)
..+.++.++-++..++..+...+....+...+...+....+.+. ...+++.+++.+...++.+++|+++|| +|||+++
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~ 85 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLA 85 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHH
Confidence 33444444433333344444444444444333434454444433 346788888999999999999999999 8999986
Q ss_pred HHHHHH--HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhh
Q 007582 86 LIFGTL--EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKA 163 (597)
Q Consensus 86 ~~~~~~--~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~ 163 (597)
.+...+ .+.+..+.+... .+.++++++|+++|++.+...|+..+++.|++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------ 141 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHL------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------ 141 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------
Confidence 442222 222222222221 156789999999999999999999999999999766
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 164 LASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
|++++++.+.+.++|.++||.+++++....+|++.|.+.+++.++++
T Consensus 142 ~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~ 188 (1140)
T PRK06814 142 LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW 188 (1140)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888899988844444444333
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-18 Score=178.63 Aligned_cols=363 Identities=10% Similarity=0.014 Sum_probs=221.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHH----HHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATC----LIFGTL 91 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i----~~~~~~ 91 (597)
..+.+....++...++....++++.|++ ++|.+..+.+++.+++.+...++.++.|.++|| +||+... .++..+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l 82 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAI 82 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHH
Confidence 4444556666666666667788888885 679999999999999999999999999999999 7985433 222222
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
+.+ .+...+ ++.+.+++.|+++|.+.+...|...++..|. + + +|++.++..
T Consensus 83 ~~~--~~~~~~-------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~ 133 (382)
T TIGR00902 83 FAA--AFSAGA-------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKV 133 (382)
T ss_pred HHH--HHHHhh-------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHH
Confidence 111 112222 2567888999999999988888888876543 1 2 278889999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCC
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDN 251 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (597)
....++|..++|.+++++.+.+|||..|.+......+.. +.+...++. ++++++ .++
T Consensus 134 ~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~~~------------------~~~- 190 (382)
T TIGR00902 134 RLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTI---PPKDAI------------------PED- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCC---CCCccc------------------ccc-
Confidence 999999999999999999998999999887654432222 222211110 010000 000
Q ss_pred chhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccch
Q 007582 252 PEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQT 331 (597)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s 331 (597)
+. .. . ..+. +..+ .|+++..+..... ......++++
T Consensus 191 ----------------~~---~~---~--------------~~~~----~~l~-~~~~~~~l~~~~l---~~~~~~~~~~ 226 (382)
T TIGR00902 191 ----------------ES---QG---D--------------SAFI----ALLK-NPMNLRFLAAVCL---IQGAHAAYYG 226 (382)
T ss_pred ----------------cc---cc---c--------------hhHH----HHHc-ChHHHHHHHHHHH---HHHHHHHHHH
Confidence 00 00 0 0000 0000 1222222211111 1122222222
Q ss_pred hHHhh--hhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 007582 332 FSITQ--GAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGL 409 (597)
Q Consensus 332 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~ 409 (597)
....+ ..+.+.. ..+....+..+..++..++.+++.++++.| +.+.+|.++..+......+
T Consensus 227 ~~~~~l~~~g~s~~------~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----------~~l~~~~~~~~~~~~~~~~ 289 (382)
T TIGR00902 227 FSAIYWQAAGISAS------ATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----------DLLLISAIACVGRWAIIGA 289 (382)
T ss_pred HHHHHHHHCCCCHh------HHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----------HHHHHHHHHHHHHHHHHHh
Confidence 22211 1222211 122223344555555566666664444433 3356777777777666554
Q ss_pred HHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 007582 410 VEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTY-LSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~-~~~~l~~~i~~~~~~~i~ 488 (597)
. .+.+.++..-++.++..+...+....|+.+. |++.|++++++++ ...+++..+++.+.+.+.
T Consensus 290 ~---------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 290 I---------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred H---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2344555556888899999999999999988 9999999999975 567788999999988875
Q ss_pred hhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 007582 489 AVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVL 529 (597)
Q Consensus 489 ~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 529 (597)
+.. | ...|++.+++++++.++
T Consensus 354 ~~~--------g------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 354 PTL--------G------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred Hhc--------c------------HHHHHHHHHHHHHHHHH
Confidence 421 1 13477777777766544
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-18 Score=179.30 Aligned_cols=389 Identities=12% Similarity=0.075 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccch-hHHHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSR-FATCLIFGTLEVLAL 96 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr-~~~i~~~~~~~~ig~ 96 (597)
.-+.+..++...++-...+++++|+.+++|++..+.|++.+++.++..++.++.|+++|| +|| |+++.++.++..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHH
Confidence 345666777767766777999999999999999999999999999999999999999999 765 778888887777777
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhh----c----ccCCCCCchhhhhhhhHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFG----A----GQFDENDPKGAKALASYF 168 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~----~----e~~~~~~~~~~~~r~~~~ 168 (597)
.+..+.+ +...+++.|++.|++.+...+...+.. . |...... |.|.+
T Consensus 84 ~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~~ 138 (418)
T TIGR00889 84 FFAAQVT-------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRVM 138 (418)
T ss_pred HHHHHhc-------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceeee
Confidence 6666553 345678888888887766666554432 1 2222111 45555
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCC
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (597)
+ .+|.++++.+++.+.....|+ +|++.+++.++..++.+ ..|+.+..+++++
T Consensus 139 G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~-------------------- 190 (418)
T TIGR00889 139 G------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAK-------------------- 190 (418)
T ss_pred h------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCccccc--------------------
Confidence 5 367777777777664333344 45555554444333222 2222110000000
Q ss_pred CCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhH-HHHHHHhHhhhc
Q 007582 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPI-LASTILMNTCLA 327 (597)
Q Consensus 249 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~ 327 (597)
....+.. ...+.+ . ++ + +++...+.. +......... .
T Consensus 191 ----~~~~~~~---------------~~~~~~---~-------------~k-----~-~~~~~~~~~~~~~~~~~~~~-~ 228 (418)
T TIGR00889 191 ----MSIKVML---------------GLDAFI---L-------------FK-----N-KRMAIFFFFSMLLGAPLQIT-N 228 (418)
T ss_pred ----cCHHHHh---------------hhhHHH---H-------------hc-----C-CCeeeHHHHHHHHHhHHHHH-H
Confidence 0000000 000000 0 00 0 011011111 1111111111 1
Q ss_pred ccchhHHhhhhhcCCCCC-ccc-ccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 007582 328 QLQTFSITQGAAMDPHLG-SIK-VPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMT 405 (597)
Q Consensus 328 ~~~s~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~ 405 (597)
.+...+..+ .+.+.... ++. ...+....++.+..++...+.+++.|++++|+. +.++.++.+++..
T Consensus 229 ~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~-----------l~~~~~~~~v~~~ 296 (418)
T TIGR00889 229 IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV-----------MLLSLVAWALRFG 296 (418)
T ss_pred HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-----------HHHHHHHHHHHHH
Confidence 111112111 11111100 000 011223334445555666777777777776653 4556665555544
Q ss_pred HHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHH-HHHHHHHHHHHHHH
Q 007582 406 VAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTY-LSLSFGYFLSSAFV 484 (597)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~-~~~~l~~~i~~~~~ 484 (597)
+..... . .....+.++...++.+++.....+....++.+.+|++.|++++++.+ ....+++.+++.+.
T Consensus 297 l~~~~~--------~---~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 297 FFAYGD--------P---EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHcC--------c---chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 443310 0 01122334555677888888888888899999999999999999997 56789999999999
Q ss_pred HHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 007582 485 DIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYK 538 (597)
Q Consensus 485 ~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~ 538 (597)
+.+.+..+. .+..+++..|.+.+++++++.+.++++.++.+
T Consensus 366 G~l~~~~g~-------------~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 366 GVMVEKMFA-------------YGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHhcc-------------ccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 877653210 00012345688888888888888888887553
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-19 Score=185.28 Aligned_cols=166 Identities=11% Similarity=0.034 Sum_probs=133.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++..+...++.....+...+.++.++.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+.+.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i 79 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAI 79 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH
Confidence 345666666667767777667776667999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++++.+. .+.+.++++|+++|++.+.. +...++++|.+|+++ |++..+++...
T Consensus 80 ~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~ 134 (366)
T TIGR00886 80 PCLWAGLAV------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGW 134 (366)
T ss_pred HHHHHHHHh------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHH
Confidence 998888764 03567889999999996654 557889999999665 89999998877
Q ss_pred HHHHHHHHhhhheeeec----------ccchhHHH-HHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFT----------EKSWWLGF-LVSSVAN 206 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~----------~~~w~~~f-~i~~~~~ 206 (597)
.++|..+++.+++.+.. ..+||+.| ++..++.
T Consensus 135 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 135 GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 77887777766654432 34899998 4434443
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-18 Score=180.70 Aligned_cols=156 Identities=17% Similarity=0.156 Sum_probs=115.1
Q ss_pred hHHHHcccccC--CchhhHHHHHHH--HH---HHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 007582 37 SMVLYFKNEMH--FDLAGASNTLTN--FF---GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLH 109 (597)
Q Consensus 37 ~~~~yl~~~l~--~~~~~~~~i~~~--~~---~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~ 109 (597)
++..++.++.. .++.+.+.+.+. +. ++..++.++.|+++|| +|||+++.++.++..++.++++++++++...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATIG 92 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhhH
Confidence 45555554433 344555544433 22 3334678999999999 8999999999999999999988876432100
Q ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheee
Q 007582 110 PPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (597)
......++++|+++|++.|...+..+.+++|.+|+++ |++..++.+.+..+|..+++.++..+
T Consensus 93 -----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 93 -----------IWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred -----------HHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012468899999999999999999999999999766 99999999999999999988766443
Q ss_pred e--------cccchhHHHHHHHHHHHHHH
Q 007582 190 F--------TEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 190 ~--------~~~~w~~~f~i~~~~~~~~~ 210 (597)
. ..++||+.|.+..++.+++.
T Consensus 156 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 156 SYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 2 35689999988766655443
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-18 Score=171.67 Aligned_cols=395 Identities=11% Similarity=-0.030 Sum_probs=249.0
Q ss_pred chhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH
Q 007582 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~ 86 (597)
...++.++|++++. ...+...+....+.+.+.+++.+++|+|+.|.++++++-.+...+..+.-|.+.|| ||-|+...
T Consensus 6 ~~~k~~~~~~L~~S-~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~ 83 (417)
T COG2223 6 ARGKRIARRNLWLS-TLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTI 83 (417)
T ss_pred hccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHH
Confidence 34567788888844 44455556666788888899999999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
++.++..+-.+..+++...+ +++.+++.+++.|++.|.. ++..++++..+|+++ +|.
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~----------------~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~------qG~ 140 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYP----------------STWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEK------QGL 140 (417)
T ss_pred HHHHHHHHHHHHHHHHccCC----------------chHHHHHHHHHHhccccee-hcccccccccCChhh------hhH
Confidence 99999999999999998655 4578999999999996554 556677999999776 899
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecccc---hhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHh
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTEKS---WWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKN 243 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~---w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (597)
+.+++. ..|+|..+...++..+....+ |+..-.+..+.+++..++..+..+..++.++..++..
T Consensus 141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------ 207 (417)
T COG2223 141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------ 207 (417)
T ss_pred HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc------------
Confidence 999999 899999999998888887778 9988888888877776666655433222111110000
Q ss_pred cCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhH
Q 007582 244 RKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMN 323 (597)
Q Consensus 244 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 323 (597)
| . .++ .+...++.+....+=......+
T Consensus 208 -----~---~------------------------~~~---------------------~v~~~~~~W~lsllY~~tFG~F 234 (417)
T COG2223 208 -----P---A------------------------QLK---------------------AVFSNKDTWLLSLLYFATFGGF 234 (417)
T ss_pred -----h---h------------------------HHH---------------------HHhcCcchHHHHHHHHHHHHHH
Confidence 0 0 000 0000111111111111111111
Q ss_pred hhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 007582 324 TCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVS 403 (597)
Q Consensus 324 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~ 403 (597)
+.+..+.+.+.....+.+ ....+.+....++...+.-|+-.++.||++.++. +.+.+..++++
T Consensus 235 vgfs~~l~~~~~~~fg~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv-----------~~~~f~~~~~~ 297 (417)
T COG2223 235 VGFSAYLPMYLVTQFGLS------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV-----------TLAVFVGMALA 297 (417)
T ss_pred HHHHHHHHHHHHHhcCCC------hhhHHHHHHHHHHHHHHHHhccchhhhhccchhH-----------HHHHHHHHHHH
Confidence 111111111111111222 2233344445555666666777777666665442 44555555665
Q ss_pred HHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 007582 404 MTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAF 483 (597)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~ 483 (597)
..+.++... ...+ ..+.+..+..++..++..+..+...+-.+..++|. .-|...|+......+|++.-+..
T Consensus 298 ~~~l~~~~~-----~~~~---~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 298 AALLSLFLT-----GFGH---GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred HHHHHcccc-----cccc---CcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHH
Confidence 555554311 0000 12223333333444444444455555566666666 55677777777777887776666
Q ss_pred HHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 484 VDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAW 536 (597)
Q Consensus 484 ~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~ 536 (597)
.....+.+ +.....|+++..+.+++.++.+..+.+
T Consensus 369 ~g~~~~~t------------------g~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 369 FGVSLDLT------------------GSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHhc------------------ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66554432 223456888888888888888776654
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-18 Score=184.35 Aligned_cols=355 Identities=14% Similarity=0.072 Sum_probs=215.4
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc---cchhH-HHHHHHHHHHHHHHHH
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF---LSRFA-TCLIFGTLEVLALVML 99 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~---~Gr~~-~i~~~~~~~~ig~~l~ 99 (597)
.+...+....+.+++..|+++.+|+++.++|.+.++..+...+..|+.|+++||. +|||| .++++.++..++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4455666677788899999999999999999999999999999999999999972 57755 5677777888777777
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAA 179 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (597)
...+..+. ......+++.+++.+++.+.......++.+|..++. ++|++..++.+...++|.
T Consensus 88 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-----~~R~~~~~~~~~~~~~g~ 149 (437)
T TIGR00792 88 FTTPDFSA-------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP-----RERESLSTFRRFGATLGG 149 (437)
T ss_pred HhCCCCCc-------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH-----HHHHHHHHHHHHHHHHHH
Confidence 65542211 123566778888899999988888889999987532 238899998888888887
Q ss_pred HHHhhhheeee-------cccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCc
Q 007582 180 VIGVTGIVYVF-------TEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNP 252 (597)
Q Consensus 180 ~~~~~~~~~~~-------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (597)
.+++.+.+.+. +..+|++.+.+.+++.++..++.+...++.+.+.+.. .++
T Consensus 150 ~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~--------------------~~~-- 207 (437)
T TIGR00792 150 LLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN--------------------IEK-- 207 (437)
T ss_pred HHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--------------------ccc--
Confidence 76655443322 2468999988877776655544443332211000000 000
Q ss_pred hhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchh
Q 007582 253 EELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTF 332 (597)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 332 (597)
+.+..+. ++ .....|.+...+...++..............
T Consensus 208 ----------------------~~~~~~~-------------~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
T TIGR00792 208 ----------------------KLSLKQI-------------FK-----ALFKNDQLLILCLAYLFYNLAFNIKNGVQVY 247 (437)
T ss_pred ----------------------CCCHHHH-------------HH-----HHhCCHHHHHHHHHHHHHHHHHHHHcchhhe
Confidence 0000000 00 0000112211111111111111111111111
Q ss_pred HHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 007582 333 SITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEV 412 (597)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~ 412 (597)
+..+..+ + ....+.+..+..+..++..++..++.+++++|+. +.+|.++++++++...+.
T Consensus 248 ~~~~~~~---~----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~-----------~~~~~~~~~~~~~~~~~~-- 307 (437)
T TIGR00792 248 YFTYVLG---D----PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL-----------FAGGILLMVLGYLIFFFA-- 307 (437)
T ss_pred eEeeecC---C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-----------HHHHHHHHHHHHHHHHHc--
Confidence 1111111 0 0011222333456666667777777666665543 456666666655544332
Q ss_pred HHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccC-------cchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007582 413 IRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAP-------AGMKTLASSFTYLSLSFGYFLSSAFVD 485 (597)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P-------~~~r~~~~~~~~~~~~l~~~i~~~~~~ 485 (597)
+.+.+.+++..++.+++.....+..+++..+..| .+.+|.+.|+.++...++..+++.+.+
T Consensus 308 ------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 308 ------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122344455566778888888888888888765 567899999999999999999999988
Q ss_pred HHhhh
Q 007582 486 IINAV 490 (597)
Q Consensus 486 ~i~~~ 490 (597)
.+.+.
T Consensus 376 ~ll~~ 380 (437)
T TIGR00792 376 LILGI 380 (437)
T ss_pred HHHHH
Confidence 77553
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-17 Score=176.92 Aligned_cols=180 Identities=8% Similarity=0.067 Sum_probs=136.9
Q ss_pred chhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc-----ch
Q 007582 7 NIKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL-----SR 81 (597)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~-----Gr 81 (597)
+.|+.+.+| .+..+...+......+.....++.++++ .|.+..+.+.... .... +++.++.|+++|| + ||
T Consensus 5 ~l~~~~~~~-~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr-~~~~~~Gr 79 (491)
T PRK11010 5 YLRIFQQPN-SAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDR-YTPPFLGR 79 (491)
T ss_pred HHHHHcccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHc-ccccCCCC
Confidence 556655555 4456666667767777677777777665 4888888887622 2222 3688999999999 8 99
Q ss_pred hHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchh
Q 007582 82 FAT-CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKG 160 (597)
Q Consensus 82 ~~~-i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~ 160 (597)
||. +.++.+...++.++++.... ..+.+.+.+.+++.+++.+...+...++.+|.+|+++
T Consensus 80 rr~~ll~~~i~~~~~~~~~a~~~~----------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~--- 140 (491)
T PRK11010 80 RRGWLLATQLLLLVAIAAMGFLEP----------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE--- 140 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHcCC----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---
Confidence 986 55666666677666666531 2357788889999999999999999999999999665
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhheeeec-ccchhHHHHHHHHHHHHHHHHH
Q 007582 161 AKALASYFNFYLLATTVAAVIGVTGIVYVFT-EKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 161 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
|++..++...+.++|..+++.+++++.+ ..|||..|++.+++.++..+..
T Consensus 141 ---rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 141 ---RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888877 4799999999877655554433
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-17 Score=176.18 Aligned_cols=178 Identities=12% Similarity=-0.055 Sum_probs=131.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHccc-ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKN-EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
|+++... ..+...+....+.+.+.+.+.+ ++|++.+|.+++.+++.++..++.+..|++.|| +|.|+++.++.++..
T Consensus 34 r~l~~s~-~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISV-SCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHH
Confidence 5555444 4444445555566666667655 899999999999999999999998999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
+.+++.+++...+ ..++..+++.|++.|++ |...+.....+++.+|+++ ||++++++..
T Consensus 112 i~~~~~~~a~~~~--------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g 170 (462)
T PRK15034 112 IPCVWLGIAVQNP--------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGG 170 (462)
T ss_pred HHHHHHHHHHccc--------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHH
Confidence 9998888752100 12577899999999998 6678888899999999665 9999999976
Q ss_pred HHHHHHHHHhhhheeee------------------cccchhHHHHHHHHHHHHHHHHHHh
Q 007582 174 ATTVAAVIGVTGIVYVF------------------TEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~------------------~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
..|+|..+++.+...+. +..+|+.++++..++.++..++.++
T Consensus 171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777765544432211 1334777776666655555544443
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-18 Score=180.67 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=135.1
Q ss_pred ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhH
Q 007582 45 EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIA 124 (597)
Q Consensus 45 ~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (597)
+++++..+.+++.+.+..|..++.+.+|+++|| +|-|+++.++.++.++++++.+++... +.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~-----------------~~ 128 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASI-----------------GF 128 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHh-----------------cc
Confidence 578899999999999999999999999999999 899999999999999999999998743 33
Q ss_pred HHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc-cchhHHHHHHH
Q 007582 125 AYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE-KSWWLGFLVSS 203 (597)
Q Consensus 125 ~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~w~~~f~i~~ 203 (597)
..+++.|+++|++.|...|+.....+..+|+++ |+++.++.+.+..+|.+++..++|++.++ +||+.+|++.+
T Consensus 129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g 202 (466)
T KOG2532|consen 129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG 202 (466)
T ss_pred hhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence 478999999999999999999999999999776 99999999999999999998899999877 99999999999
Q ss_pred HHHHHHHHHHHhhc
Q 007582 204 VANFIGLIALAAGK 217 (597)
Q Consensus 204 ~~~~~~~~~~~~~~ 217 (597)
.+.++..++++...
T Consensus 203 ~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 203 IVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHh
Confidence 88777776665543
|
|
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-17 Score=177.29 Aligned_cols=358 Identities=14% Similarity=0.083 Sum_probs=223.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
.+..+...+++.+++...-..-++-++ .++.-|+...+.+..+..+-..+..+++|.++|| +.|||+++++.++..+.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHH
Confidence 344444555555555543333333333 3445678888999999999999999999999999 89999999999998877
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.+++++..... ..+.+.+++.-++.|++.+...|+..+++.|+.|+++ ..++.++.....
T Consensus 89 ~~~L~~l~~~~--------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~ 148 (524)
T PF05977_consen 89 ALLLAVLAFFG--------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISF 148 (524)
T ss_pred HHHHHHHHHhC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHH
Confidence 66665543222 2356788888999999999999999999999999665 889999999999
Q ss_pred HHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhh
Q 007582 176 TVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEEL 255 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 255 (597)
|+.-.+||.++|.+....|-...|.+.++..++.++++...++... ++..+-+... ..++
T Consensus 149 niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e~~~----~~l~------------- 208 (524)
T PF05977_consen 149 NIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSSLPRERFF----SALR------------- 208 (524)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccccchhhhh----hhHH-------------
Confidence 9999999999999887788888998888776665544433222110 0000000000 0000
Q ss_pred hhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHh
Q 007582 256 YEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSIT 335 (597)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~ 335 (597)
+ ..++ +...+.+...+.......++...+......+..
T Consensus 209 -~-----------------G~ry------------------------v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~ 246 (524)
T PF05977_consen 209 -E-----------------GLRY------------------------VRSSPPLRSVLLRSFLFNLFASAVWALLPLFAR 246 (524)
T ss_pred -H-----------------HHHH------------------------HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHH
Confidence 0 0000 000011111111111111111111111112222
Q ss_pred hhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 336 QGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRR 415 (597)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~ 415 (597)
+..+.+. ...+.+....+++.++.+.+..++ .+|. +..+.+..+.++.+++++.+++.
T Consensus 247 ~~l~~~a------~~yGll~a~~gvGai~Gal~~~~l----~~~~-------~~~~lv~~~~~~~a~~~~~lal~----- 304 (524)
T PF05977_consen 247 DVLGGGA------SGYGLLLAAFGVGAILGALLLPRL----RRRL-------SSRRLVLLASLLFALALLLLALS----- 304 (524)
T ss_pred HHhCCcH------HHHHHHHHHHHHHHHHHHHHHHHh----hccc-------CcchhhHHHHHHHHHHHHHHhcc-----
Confidence 2222211 112333333445555555544443 2222 22334555666666666555543
Q ss_pred hcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007582 416 NAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINA 489 (597)
Q Consensus 416 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~ 489 (597)
.+.+..++..++.|.+.........+...+..|+++||+.+|++.+....+..+|+.+.+.+.+
T Consensus 305 ----------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 ----------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2445556677788888888888899999999999999999999999888888999998887754
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-18 Score=187.59 Aligned_cols=387 Identities=12% Similarity=0.021 Sum_probs=227.1
Q ss_pred cccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchh
Q 007582 44 NEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAI 123 (597)
Q Consensus 44 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (597)
+..+.+........+++.+|..+|+++.|+++|+ +|||++++++.++.+++.++.+++. +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------N 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------c
Confidence 4566677888899999999999999999999999 9999999999999999999999887 5
Q ss_pred HHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHH
Q 007582 124 AAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSS 203 (597)
Q Consensus 124 ~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~ 203 (597)
+..+.+.|++.|++.++...+...+++|+.+++. |+...++ ......++.+++.+++++.. +||+.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 6789999999999999999999999999999777 9999999 77777788888888888766 8999999877
Q ss_pred HHHHHHHHH-HHh-hccceeecCCCCChhHHHHHHHHHHHHhc-CCCCCCCchhhhhhhhhhhcccccccCCCCccchhh
Q 007582 204 VANFIGLIA-LAA-GKCLYRIQQPGESPLVRVAQVLVVAIKNR-KLSLPDNPEELYEINEKERASTWERIPHANQFRCLD 280 (597)
Q Consensus 204 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (597)
+..++.+++ ++. ..|+|...+.+.++..+..+ ...+.+ ....++ ....+.... ..
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~---~~a~~n~~~~~~~--~~~~~~~~~-----------------~~ 299 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILK---KIAKLNGRKLSVK--ELLRLELLL-----------------RP 299 (521)
T ss_pred HHHHHHHHHHHccCcChHHHHHcCchHHHHHHHH---HHHhhcCCCCCcH--HHHHHHHHh-----------------hH
Confidence 765555443 222 45555554444333322211 111110 000000 000000000 00
Q ss_pred hcccCCCCCCCCCCc-cccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhh
Q 007582 281 KAAIMPKDSAVAAPW-RVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPL 359 (597)
Q Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (597)
...... ..+..+ ..++.++ .+++.+.....+ ..+ ...+++..++.. +.+...........
T Consensus 300 ~~~~~~---~~~~~~~~l~~~~~--l~~~~~~~~~~~-------~~~-----~~~y~gl~~~~~--~lg~~~~~~~~~~~ 360 (521)
T KOG0255|consen 300 LKLLFT---EPKISFLDLFRTPR--LRYRTLYLLFIW-------FVF-----SLVYYGLSLNVS--GLGGNIYLNFTLSG 360 (521)
T ss_pred hhhhcc---CCCCchhhhhcCHH--HHHHHHHHHHHH-------HHH-----hHHHHhhhhhhh--hcCchHHHHHHHHH
Confidence 000000 000001 1111111 122221111111 110 111111111110 00001111111111
Q ss_pred HHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHH
Q 007582 360 LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFG 439 (597)
Q Consensus 360 i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 439 (597)
..........+...++++||.. ...+.++..++.++.++... ....+.......+..
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~-----------~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPP-----------LFLSLFLAGIGLLLFGWLPD------------DLGGWLHWILPLLGK 417 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHH-----------HHHHHHHHHHHHHHHHHhhc------------cchhHHHHHHHHHHH
Confidence 2222222233344555566654 55677777777777776531 111011222223333
Q ss_pred HHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHH
Q 007582 440 IADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFL 519 (597)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~ 519 (597)
.+........+.+..|..|+..|+.+.+.......+++.+++.+......... . ..+..+
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~------------------~--~~~~~~ 477 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFP------------------L--LGLILF 477 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc------------------c--chHHHH
Confidence 33334444448899999999999999999999999999998887765432110 0 012335
Q ss_pred HHHHHHHHHHHHHhhcccccccCC
Q 007582 520 AIVSVLNLVLYLYAAAWYKYKPEN 543 (597)
Q Consensus 520 ~~~~~~~~v~~~~~~~~~~~~~~e 543 (597)
+.++.+...+..++.||++++.+.
T Consensus 478 ~~~~~l~~~~~~~~lpet~~~~l~ 501 (521)
T KOG0255|consen 478 GWLALLLGLLSLLLLPETKGKPLP 501 (521)
T ss_pred HHHHHHHHHHHHhcCcccCCCCCc
Confidence 667777777777889999988873
|
|
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-20 Score=184.28 Aligned_cols=409 Identities=11% Similarity=0.039 Sum_probs=219.2
Q ss_pred CchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHH
Q 007582 48 FDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYF 127 (597)
Q Consensus 48 ~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (597)
+++...+.+..+..+|.++++++.||++|+ +|||+++...++++++++++++++...+. +..-..++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~~~~~------------~~~~m~~L 147 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSVGTTS------------PLGVMMTL 147 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCCCCCC------------CcchhhHH
Confidence 667778899999999999999999999999 89999999999999999997766543221 12356788
Q ss_pred HHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH----HHHHHHHHHHhhhheeee----c-------c
Q 007582 128 YGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL----LATTVAAVIGVTGIVYVF----T-------E 192 (597)
Q Consensus 128 ~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~----~~~~~g~~~~~~~~~~~~----~-------~ 192 (597)
...|+++|+|+|+-+|...+..+|.+..+. ||...+... +++-.|+.++-++.+-.. . .
T Consensus 148 ~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld 221 (538)
T KOG0252|consen 148 CFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLD 221 (538)
T ss_pred HHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHH
Confidence 999999999999999999999999988655 777766644 444444444433332111 1 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCC
Q 007582 193 KSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPH 272 (597)
Q Consensus 193 ~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 272 (597)
.=||+.|.+.++..++.+ .+.. .. |+.+..+ ++.+++.+. .. .+. . ++.+.
T Consensus 222 ~vWRl~~glg~vpa~~~l---y~Rl---~M--~Et~~Y~--------al~~~~~~~---a~--~d~------~--k~~~~ 272 (538)
T KOG0252|consen 222 GVWRIIFGLGAVPALLVL---YFRL---KM--PETARYT--------ALVSKKLKQ---AA--GDM------K--KVLSV 272 (538)
T ss_pred HHHHHHHHHHHHHHHHHH---Hhhh---cC--CcchhHH--------HHhhcCHhh---hh--hcc------c--ccccc
Confidence 238888777665533322 2211 11 1111111 011111000 00 000 0 00000
Q ss_pred CCccchhhhcccCCCCCCCCCCc-cccccchhH-HHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCccccc
Q 007582 273 ANQFRCLDKAAIMPKDSAVAAPW-RVCTVTQVE-EVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVP 350 (597)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 350 (597)
.++.+.........++.+ .+|.....+ ..|+++.....++..-+..-. ......-+++..+...... ...
T Consensus 273 -----~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~-~nL~~s~I~~~ig~~~~~~--~~~ 344 (538)
T KOG0252|consen 273 -----DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYG-QNLFQSVIFSAIGVIPSAN--TYH 344 (538)
T ss_pred -----ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cccHHHHHHHhhccCCCcc--hHH
Confidence 000000000000000111 111111100 112222222222111100000 1111122222222221100 000
Q ss_pred CC-cccchhhHHHHH----HHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 007582 351 TS-SIPVIPLLFMSI----LLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQ 425 (597)
Q Consensus 351 ~~-~~~~~~~i~~i~----~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 425 (597)
.. .....+.+...+ ..++...++|.+||++. -+.|++++++.++++++.... ..+.
T Consensus 345 ~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i-----------q~~GF~~~~i~~~~~~~~y~~---~~~~----- 405 (538)
T KOG0252|consen 345 ELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI-----------QLMGFFIMTIFFFVIAGPYNQ---LENT----- 405 (538)
T ss_pred HHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH-----------HHhhHHHHHHHHHHHcCCccc---cccc-----
Confidence 00 011112222221 22344445566687764 457888888877777664210 1111
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCC
Q 007582 426 ISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGK 505 (597)
Q Consensus 426 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~ 505 (597)
...++..-+...+++..-+.....+..|.+|.+.|+.+-+++..+.-+|+.++........+.-. +.
T Consensus 406 --~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~y---p~-------- 472 (538)
T KOG0252|consen 406 --IGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNY---PP-------- 472 (538)
T ss_pred --CceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccC---Cc--------
Confidence 11223333444555555666667778899999999999999999999999999887766543110 11
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCC
Q 007582 506 DINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDIK 548 (597)
Q Consensus 506 ~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~ 548 (597)
..+..+.++++++++++..++.+ +.||+|++++||++.+
T Consensus 473 ---~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 473 ---NIGVRNVFIILAGCMLLGILFTL-LIPETKGKSLEEISNE 511 (538)
T ss_pred ---cccchHHHHHHHHHHHHhHheeE-EeecccccCHHHhcCh
Confidence 12344568999998888876554 5679999999998643
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-17 Score=169.67 Aligned_cols=157 Identities=10% Similarity=-0.098 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh----HHHHHHHHHHHHHHHH
Q 007582 23 FSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF----ATCLIFGTLEVLALVM 98 (597)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~----~~i~~~~~~~~ig~~l 98 (597)
..++..++...+.++++.|++ ++|.+..+.|++++++.++..++.++.|.+.|| +||+ +.+.++..+. .+.
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~---~~~ 86 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLF---AVA 86 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHH---HHH
Confidence 345555666677788888885 479999999999999999999999999999999 8984 3332222211 111
Q ss_pred HHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHH
Q 007582 99 LTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVA 178 (597)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (597)
.... .++.+.+++.|++.|++.+...|...++..+..+ + |++.++..+...++|
T Consensus 87 ~~~~------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~--~------~~~a~~~~~~~~~lg 140 (382)
T PRK11128 87 FWFG------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQK--Q------IGLDYGKVRLWGSIA 140 (382)
T ss_pred HHHh------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHh--h------ccCCcchHHHHHHHH
Confidence 1111 1256788889999999999999988887777522 2 677778888888999
Q ss_pred HHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 179 AVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
..+||.+++++.+++|||..|++.++..++..
T Consensus 141 ~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 141 FVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 99999999999888999999987765544433
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-16 Score=171.53 Aligned_cols=149 Identities=14% Similarity=0.071 Sum_probs=118.7
Q ss_pred HhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 007582 36 ISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK 115 (597)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 115 (597)
+....++.+++|-+ ....|+.+...++..+..++.|.|+|. ||||+.++.+.++.++|.++++.+++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~~----------- 130 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQN----------- 130 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCCc-----------
Confidence 45567888999854 677899999999999999999999999 89999999999999999999998874
Q ss_pred CCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccch
Q 007582 116 SSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSW 195 (597)
Q Consensus 116 ~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w 195 (597)
...++++-.+.|+|.|.... ....++|..|.+. |.....+..+...+....++.++..+..+.+|
T Consensus 131 --------~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W 195 (599)
T PF06609_consen 131 --------MNTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGW 195 (599)
T ss_pred --------HHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCc
Confidence 45799999999999887765 5666899999655 66666555555555555566666555556789
Q ss_pred hHHHHHHHHHHHHHHHH
Q 007582 196 WLGFLVSSVANFIGLIA 212 (597)
Q Consensus 196 ~~~f~i~~~~~~~~~~~ 212 (597)
||.|++.++...+++++
T Consensus 196 Rw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 196 RWIFYIFIIWSGIALVL 212 (599)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 99999988876555444
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-16 Score=168.39 Aligned_cols=164 Identities=14% Similarity=0.037 Sum_probs=134.1
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
.++.....+++...+.+.+++++|.+..+.+++.+.+.++..++.++.|++.|| +|||+++.++.+++.+|.++...+.
T Consensus 11 ~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~~~ 89 (410)
T TIGR00885 11 LFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWPAA 89 (410)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444676667778899999999999999999999999999999999999 8999999999999999988865543
Q ss_pred hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh
Q 007582 104 YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183 (597)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 183 (597)
. ..+++.++++|++.|+|.|...+...+++.+..|+++ |++..++.+...++|..++|
T Consensus 90 ~----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~~g~ 147 (410)
T TIGR00885 90 E----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGSIIGM 147 (410)
T ss_pred h----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHH
Confidence 2 1256789999999999999999999999999988655 78888998989999999998
Q ss_pred hhheeeec--------------------------ccchhHHHHHHHHHHHHHH
Q 007582 184 TGIVYVFT--------------------------EKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 184 ~~~~~~~~--------------------------~~~w~~~f~i~~~~~~~~~ 210 (597)
.+++.+.. ..+||++|.+.+.+.++..
T Consensus 148 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 148 VVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765521 1369999987766544443
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-17 Score=170.97 Aligned_cols=153 Identities=9% Similarity=0.053 Sum_probs=125.7
Q ss_pred HHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 27 ENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSK 106 (597)
Q Consensus 27 ~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~ 106 (597)
+.-.++.....+.+.+.+++|++..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++.+++.+++ .++
T Consensus 11 ~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--- 85 (355)
T TIGR00896 11 NLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAP--- 85 (355)
T ss_pred cccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hhc---
Confidence 333344455556677888999999999999999999999999999999999 899999999998888877766 332
Q ss_pred cCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 007582 107 NLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
+...++++|++.|+|.+...+..+.++.|.+| ++ |++.+++++.+.++|..+++.++
T Consensus 86 ----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 86 ----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999989889999988886 33 89999999999999999999888
Q ss_pred eeeeccc--chhHHHHHHHHHHH
Q 007582 187 VYVFTEK--SWWLGFLVSSVANF 207 (597)
Q Consensus 187 ~~~~~~~--~w~~~f~i~~~~~~ 207 (597)
+.+.+.. +||+.|.+.+...+
T Consensus 143 ~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 143 VPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHH
Confidence 7776543 39988876655433
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-16 Score=164.79 Aligned_cols=440 Identities=12% Similarity=0.032 Sum_probs=255.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhh---ccchhHHHHHH-HH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDT---FLSRFATCLIF-GT 90 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~---~~Gr~~~i~~~-~~ 90 (597)
+.+..++...+...+++-...+++++|+ +++|.+....+.+..+..+...+..|+.|+++|| .+||||.++++ .+
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 3445556666666677777777888876 5799999999999999999999999999999993 38999998885 44
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
...++.++++.+.+........ .+.-++....+.++++..+..++.....+...++++|++|++++ +++.+.++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~--~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a~~~ 156 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDN--LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIANAY 156 (477)
T ss_pred HHHHHHHHHHhCchhhhhcccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHHHHH
Confidence 4555556666554321100000 00000011123455566666778888888899999999997651 14678999
Q ss_pred HHHHHHHHHHHHhhhheeee--cc-------------cchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVF--TE-------------KSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQ 235 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~--~~-------------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (597)
.+.+.++|+.+|+.++++.. .. .+.+..|.+.+++.+++.++.....++.+...+++.
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~------- 229 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF------- 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc-------
Confidence 99999999999999887541 11 156788988888777776665555444321111000
Q ss_pred HHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhH
Q 007582 236 VLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPI 315 (597)
Q Consensus 236 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 315 (597)
++ ++. +.. ++ ...+..+.+ -|+ .-.+--|.+.+++.+
T Consensus 230 -------------~~--~~~-~~~--------~~--~~~~~~~~~-------------i~~----~~~~mP~~m~~l~~v 266 (477)
T TIGR01301 230 -------------IN--SEA-APP--------SK--HGEEAFFGE-------------LFG----AFKYLPRPVWILLLV 266 (477)
T ss_pred -------------hh--hhc-ccc--------cc--cchhhhHHH-------------HHH----HHHHCCHHHHHHHHH
Confidence 00 000 000 00 000000000 000 000111334455566
Q ss_pred HHHHHHhHhhhcccchhHHhhhh-hcCCCCC-cc--ccc-CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCch
Q 007582 316 LASTILMNTCLAQLQTFSITQGA-AMDPHLG-SI--KVP-TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQL 390 (597)
Q Consensus 316 ~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~-~~--~~~-~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~ 390 (597)
+++..+.|..+..+.|.++-+.. +-++... .+ +.. .......+.+...+...+..++..++++|+
T Consensus 267 qffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k---------- 336 (477)
T TIGR01301 267 TCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK---------- 336 (477)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----------
Confidence 66677777777777777655421 1111100 00 000 111223334444444445555544443221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--ccc-CCCC--ccch-HHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcc--hh
Q 007582 391 QRVGIGLVLSAVSMTVAGLVEVIRRN--AFN-ETPP--KQIS-LFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAG--MK 462 (597)
Q Consensus 391 ~~~~~G~~~~~i~~~~~~~~~~~~~~--~~~-~~~~--~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~r 462 (597)
....++.++.++++....+......+ ... .+.. .+.. .+..+..+.+.|+.....+..+++.+.+..|.+ ..
T Consensus 337 ~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~ 416 (477)
T TIGR01301 337 RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQ 416 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCC
Confidence 11356777777777777655321100 000 0000 1112 355667788889999999999999999999954 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 007582 463 TLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYK 538 (597)
Q Consensus 463 ~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~ 538 (597)
|..+|+.+++..+...+.+...+.+....++ +..+.+.+-++..+++.+..++..|+.+
T Consensus 417 G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-----------------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 417 GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-----------------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-----------------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999988888888766654432211 1123466666777777777777777654
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-17 Score=167.82 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=120.5
Q ss_pred HHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHHhhcc
Q 007582 32 IANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF----LSRFATC-LIFGTLEVLALVMLTIQAYSK 106 (597)
Q Consensus 32 ~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~----~Gr~~~i-~~~~~~~~ig~~l~~~~~~~~ 106 (597)
+++.....+.+.+++|++.++.++..... +...+ .++.|+++||+ +||||.+ +.+.++..+..+.+++...
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-- 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-- 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 34555566667778899999999886553 33333 88999999993 2999975 5666666666656655432
Q ss_pred cCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 007582 107 NLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
..+.+.+....++.+++.+...+...++++|.+|+++ |++..++...+.++|.++++.++
T Consensus 80 --------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~ 139 (356)
T TIGR00901 80 --------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLA 139 (356)
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHH
Confidence 1245566777778888889999999999999998665 99999999999999999999998
Q ss_pred eeeecccc--------hhHHHHHHHHHHHHHHHHHH
Q 007582 187 VYVFTEKS--------WWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 187 ~~~~~~~~--------w~~~f~i~~~~~~~~~~~~~ 214 (597)
+++....+ ||..|++.+++.++..+..+
T Consensus 140 ~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 140 LVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 87776667 99999988877666554433
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-15 Score=156.83 Aligned_cols=162 Identities=9% Similarity=0.054 Sum_probs=124.8
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc-----chhH-HHHHHHHHHHHHHH
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL-----SRFA-TCLIFGTLEVLALV 97 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~-----Gr~~-~i~~~~~~~~ig~~ 97 (597)
.+.....+.-...-++.|+++. |++.++.|++..+... .+..++.|+++|| + |||| .+.++.++..++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHH
Confidence 3344444444555677777754 9999999999766654 6889999999999 7 8876 67777877777777
Q ss_pred HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH
Q 007582 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV 177 (597)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (597)
++.+... ..+.+.+++..++.++..+...+...++++|.+|+++ |++..++...+.++
T Consensus 84 ~l~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g~~~ 141 (402)
T PRK11902 84 AMAFCPP----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLGYRL 141 (402)
T ss_pred HHHhcCc----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHHHHH
Confidence 6666531 1245667777777888889999999999999999666 99999999999999
Q ss_pred HHHHHhhhheeeecc-cchhHHHHHHHHHHHHHHH
Q 007582 178 AAVIGVTGIVYVFTE-KSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 178 g~~~~~~~~~~~~~~-~~w~~~f~i~~~~~~~~~~ 211 (597)
|..+++.+++++.+. .|||..|++.+++.++..+
T Consensus 142 g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 142 AMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 999998888777664 5999999987776555443
|
|
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-16 Score=153.83 Aligned_cols=431 Identities=12% Similarity=0.017 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 007582 19 FVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (597)
Q Consensus 19 ~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l 98 (597)
.......++-.......+.+.+-+....+.+..+...+......+..+++...|.++|+ +|||+...+..+..++-..+
T Consensus 81 ~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~i 159 (528)
T KOG0253|consen 81 FVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVI 159 (528)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHh
Confidence 34455555556666677777777778888889999999999999999999999999999 89999988888766665555
Q ss_pred HHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHH
Q 007582 99 LTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVA 178 (597)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (597)
-..++ ++..+.+.|.+.|+|.|+ .|...++-.|..|..+ |...+-.. ....+|
T Consensus 160 s~~sp-------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig 212 (528)
T KOG0253|consen 160 SGASP-------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIG 212 (528)
T ss_pred hcCCC-------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHH
Confidence 55554 455789999999999999 9999999999999766 55555444 445667
Q ss_pred HHHHhhhheeeecccchhHHHHHHHHHHHHHH--HHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhh
Q 007582 179 AVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL--IALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELY 256 (597)
Q Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 256 (597)
.++...+.-.+..++|||+-++.......+.. ..+...+||+..-+.++..+.++. ....|.++.++|.-..+..
T Consensus 213 ~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL---~kiArmNg~qlplgvl~~s 289 (528)
T KOG0253|consen 213 QVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETL---HKIARMNGKQLPLGVLESS 289 (528)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHH---HHHHHhcCCCCCcceeeee
Confidence 76666555444567799987665443333222 234455666655444444433332 2233445555554322222
Q ss_pred hhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhh
Q 007582 257 EINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQ 336 (597)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~ 336 (597)
.+.+.++.. .-.|+.+.+..++.-.+...++. ..-+|+.+.....++.+...+...... +.-..|
T Consensus 290 ~~~~~e~e~-----------~~~~~~~~~a~ke~rg~~~nLls---p~lrkttlllw~iwfgnafsyyg~VLl-ttelfq 354 (528)
T KOG0253|consen 290 AIDRQEQEE-----------SDLDDSKSSAAKEVRGGTTNLLS---PKLRKTTLLLWRIWFGNAFSYYGSVLL-TTELFQ 354 (528)
T ss_pred hhhhhhhhh-----------hchhhhhhccccccccchHhhcC---hHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHh
Confidence 221111100 01111111111000000000111 112344443433333332222111111 111111
Q ss_pred hhh----cCCCCC-------ccccc--CCccc-chhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHH
Q 007582 337 GAA----MDPHLG-------SIKVP--TSSIP-VIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAV 402 (597)
Q Consensus 337 ~~~----~~~~~~-------~~~~~--~~~~~-~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i 402 (597)
... .+...+ ..... ..... .+..+.-+....+...+++++|||+. |....++.++
T Consensus 355 sgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT-----------Mal~l~~f~i 423 (528)
T KOG0253|consen 355 SGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT-----------MALSLILFGI 423 (528)
T ss_pred ccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH-----------HHHHHHHHHH
Confidence 100 000000 00000 00000 01111111122233334555599875 4444444444
Q ss_pred HHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHH
Q 007582 403 SMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSA 482 (597)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~ 482 (597)
..+...... . ......+++.. -.+....+-+.+.|..|++|...|+.+.|.....+.+|+++.+.
T Consensus 424 flfll~~c~--~---------rn~~tvllf~a----rafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~ 488 (528)
T KOG0253|consen 424 FLFLLTTCK--T---------RNAYTVLLFTA----RAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPV 488 (528)
T ss_pred HHHHHHHhc--C---------cchhHHHHHHH----HHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhH
Confidence 433333221 0 01111222222 22222345567889999999999999999999999999999888
Q ss_pred HHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 007582 483 FVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPE 542 (597)
Q Consensus 483 ~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 542 (597)
+. ..... +....-.+++++++++.+...++--|+|||.+
T Consensus 489 iA-~~~e~--------------------s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 489 IA-MRAEL--------------------STSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HH-HHhcc--------------------ceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 77 22211 11112467788888888888888889999864
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-15 Score=164.54 Aligned_cols=176 Identities=7% Similarity=-0.066 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhh----hccch-hHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISD----TFLSR-FATCLIFGTLEVL 94 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D----~~~Gr-~~~i~~~~~~~~i 94 (597)
--...+...+.+..+.+++..|+++.+|++...+|.+..+..+...+..|+.|+++| | +|| |+-++++.+...+
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHH
Confidence 335566677778888899999999999999999999999999999999999999999 5 598 5556667766677
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.+++...+..+. .....++++..++.+++.........++.+|+.++.+ +|.+..++-...
T Consensus 90 ~~~llf~~p~~~~-------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~~ 151 (473)
T PRK10429 90 VLFLLFSAHLFEG-------------TAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRFF 151 (473)
T ss_pred HHHHHHcCCCCCc-------------cHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHHH
Confidence 6655543221110 1134456666677788888888889999999986322 388888886676
Q ss_pred HHHHHHHHhhhheee-------ecccchhHHHHHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYV-------FTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~-------~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.++|..+.+.+...+ .+..+|+....+.+++.+++.++.+
T Consensus 152 ~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 152 ASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 777655554433211 1123566655555555444443333
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-15 Score=168.18 Aligned_cols=196 Identities=12% Similarity=0.161 Sum_probs=153.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.+|.+.+.+...++....+.+....+.+.++++|+++..+.|++.+.+.++..++.++.|+++|| +||||.+.++.+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~ 108 (633)
T TIGR00805 30 KIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIM 108 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHH
Confidence 35555555555666666777888888899999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhccc----------------CCCCCCCCC------------CcCCch----hHHHHHHHHHHHHhcccc
Q 007582 93 VLALVMLTIQAYSKN----------------LHPPDCGKS------------SCLKGA----IAAYFYGSLYLYSFGCGG 140 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~----------------~~~~~~~~~------------~~~~~~----~~~~~~~~r~l~g~g~g~ 140 (597)
.+|+++.++++.... .....|-.+ .|.+.. ...+++++|+++|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 999999988742110 001122100 122212 356788999999999999
Q ss_pred CcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeccc----------------------chhHH
Q 007582 141 NRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEK----------------------SWWLG 198 (597)
Q Consensus 141 ~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------------~w~~~ 198 (597)
..+...+++.|.+|+++ |+..+++++.+..+|..+|+++++++.+.+ +|+..
T Consensus 189 ~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred chhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 99999999999999776 999999999999999999999988765422 37888
Q ss_pred HHHHHHHHHHHHHHHHh
Q 007582 199 FLVSSVANFIGLIALAA 215 (597)
Q Consensus 199 f~i~~~~~~~~~~~~~~ 215 (597)
|++.+++.++..+.++.
T Consensus 263 Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 263 FLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88877766555544443
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-14 Score=144.95 Aligned_cols=155 Identities=14% Similarity=0.070 Sum_probs=132.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
+|--...+..-|+...........+.+.+++.++++..+++.+...+..+..+.++..|++.+| +|+|+.+++|..+++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~a 89 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYA 89 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHH
Confidence 4444445555555555556688889999999999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
+|..+..-+.. ...+.+++++.++.|.|.|...++..+|++.+.+++. -.+-+++.+.
T Consensus 90 vg~~lF~pAa~----------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~ 147 (422)
T COG0738 90 VGAALFWPAAS----------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQA 147 (422)
T ss_pred HHHHHHhhhhh----------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHH
Confidence 99988764443 3467899999999999999999999999999999654 4567788888
Q ss_pred HHHHHHHHHhhhheeeec
Q 007582 174 ATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~ 191 (597)
...+|+.++|++++++..
T Consensus 148 fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 148 FNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 899999999999876644
|
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-14 Score=154.48 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc----chhHHH-HHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL----SRFATC-LIFGT 90 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~----Gr~~~i-~~~~~ 90 (597)
..+.-...++.....+..+.+++..|+++.+|++..++|.+.+...+...+..++.|+++|| . ||||.. .++.+
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDS-VNTRWGKFRPFLLFGTA 87 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeec-CCCCCcCchHHHHHHHH
Confidence 33334456667777777788889999999999999999999999999999999999999999 5 777755 55655
Q ss_pred HHHHHHHHHHHHh-hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 91 LEVLALVMLTIQA-YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 91 ~~~ig~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
...+..+++...+ ..+. .......+...++.+++.+...+...++..|+..+.+ +|.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~ 149 (448)
T PRK09848 88 PLMIFSVLVFWVPTDWSH-------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGA 149 (448)
T ss_pred HHHHHHHHHHhCcCCCCc-------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHH
Confidence 5554444432211 1100 1123445556667888888888888888888876432 2666666
Q ss_pred HHHHH-----HHHHHHHHhhhhee
Q 007582 170 FYLLA-----TTVAAVIGVTGIVY 188 (597)
Q Consensus 170 ~~~~~-----~~~g~~~~~~~~~~ 188 (597)
+..++ .+++..++|.+.+.
T Consensus 150 ~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 150 ARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55443 34556666665543
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-15 Score=152.21 Aligned_cols=151 Identities=9% Similarity=-0.004 Sum_probs=131.2
Q ss_pred hHHhHHHHcccccCCchhh-HHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 34 NGISMVLYFKNEMHFDLAG-ASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 34 v~~~~~~yl~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
..+++.+|+.+++|++..+ .|.+.++|..+..++.+++|+++|| +|.|+++.++.+...+.+++++++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 4556778999999999999 9999999999999999999999999 8999999999999999999999876
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 192 (597)
+...+.+.|++.|++.|... +...++...+|+++ |+++.++...+..+|.++++.++++ ...
T Consensus 114 ----------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~ql-l~s 175 (511)
T TIGR00806 114 ----------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQL-LVT 175 (511)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 45689999999999999999 99999999999555 9999999999999999999999988 456
Q ss_pred cchhHHHHH---HHHHHHHHHHH
Q 007582 193 KSWWLGFLV---SSVANFIGLIA 212 (597)
Q Consensus 193 ~~w~~~f~i---~~~~~~~~~~~ 212 (597)
++||.-+.+ ......+++++
T Consensus 176 ~gWr~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 176 LGWISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred cCchhHHHHHHHHHHHHHHHHHH
Confidence 799865544 33334444443
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.9e-15 Score=156.96 Aligned_cols=183 Identities=8% Similarity=-0.010 Sum_probs=127.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc---cchh-HHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF---LSRF-ATCLIFG 89 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~---~Gr~-~~i~~~~ 89 (597)
+|..+.--...+...+.+..+..++..|+++.+|++..++|.+..+..+...+..|+.|+++||. +||| +-++++.
T Consensus 8 ~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~ 87 (444)
T PRK09669 8 TKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFA 87 (444)
T ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHH
Confidence 33344344555666677777888999999999999999999999999999999999999999982 4664 5555677
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
+...+..+++...+.... .....++++..++.+.+.........++.+|+.++. ++|++..+
T Consensus 88 ~~~~i~~~l~f~~p~~~~-------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~-----~eR~~l~~ 149 (444)
T PRK09669 88 IPFGVVCLLTFYTPDFGA-------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP-----RERHSLQS 149 (444)
T ss_pred HHHHHHHHHHHhCCCCCc-------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH-----HHHHHHHH
Confidence 777676655544331110 224556666677777777777777889999988642 23888888
Q ss_pred HHHHHHHHHHHHHhhhhe----eee---cccchhHHHHHHHHHHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIV----YVF---TEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~----~~~---~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+.....++|..+++.+.. ++. ...+|+..+.+.+++..+..++.+
T Consensus 150 ~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 150 WRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 888888888777765432 221 134688777766665544444333
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-14 Score=155.66 Aligned_cols=355 Identities=12% Similarity=0.060 Sum_probs=226.1
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhh----hccchhHHHH-HHHHHHHHHHHH
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISD----TFLSRFATCL-IFGTLEVLALVM 98 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D----~~~Gr~~~i~-~~~~~~~ig~~l 98 (597)
.+...+.++....++..|.++.+|+++...+.+..+..+...+..|+.|+++| | +||||-.+ +|.++..++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHH
Confidence 35555666667778899999999999999999999999999999999999999 7 79766555 677777777777
Q ss_pred HHHH-h-hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 99 LTIQ-A-YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 99 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
+... + .... .....++.+..++..++.........++.+|+.++.+ +|.+..++-....+
T Consensus 89 lf~~~p~~~~~-------------~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 89 LFSPPPAGLSF-------------TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSM 150 (428)
T ss_pred hhccccchhhh-------------hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHH
Confidence 6654 2 1110 1134456777777899999999999999999998543 38899999888888
Q ss_pred HHHHHHhhhheeeec----c---cchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007582 177 VAAVIGVTGIVYVFT----E---KSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLP 249 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~----~---~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 249 (597)
+|..+...+.+.+.+ . .+|++...+.+++.+++.++.....|+...+.++ +
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~----------------------~ 208 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTE----------------------Q 208 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccc----------------------c
Confidence 888765555544332 1 1688887777777666665555544430000000 0
Q ss_pred CCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhccc
Q 007582 250 DNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQL 329 (597)
Q Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 329 (597)
+ ++.++.|. ++... ++ |.+...+...++....+......
T Consensus 209 ~-----------------------~~~~~~~~-------------~~~~~----~n-r~~~~l~~~~~~~~~~~~~~~~~ 247 (428)
T PF13347_consen 209 E-----------------------KKISLRDS-------------LRSLF----RN-RPFRILLLAFFLQWLAFALMNTF 247 (428)
T ss_pred c-----------------------cccccccc-------------hhhhc----cc-chHHHHHHHHHHHHhhhhhhhhH
Confidence 0 00000000 00000 01 11212222222222222221222
Q ss_pred chhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 007582 330 QTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGL 409 (597)
Q Consensus 330 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~ 409 (597)
..++..+..+.+. ..+.+.....+..++..|+..++.+++++|+. +..+.++.+++.++..+
T Consensus 248 ~~y~~~~vl~~~~-------~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-----------~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 248 LPYYFTYVLGNEG-------LISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-----------YIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHhcCch-------hhHHHHHHHHHHHHHHHHHHHHHHHHccceee-----------hhhhHHHHHHHHHHHHH
Confidence 2222222222221 12233334556667777887887666666654 55777777777776665
Q ss_pred HHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCc-------chhhHHHHHHHHHHHHHHHHHHH
Q 007582 410 VEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPA-------GMKTLASSFTYLSLSFGYFLSSA 482 (597)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~-------~~r~~~~~~~~~~~~l~~~i~~~ 482 (597)
.. ..+.+++.+..++.+++....+...++...|..+. +..|...|++++...++..++..
T Consensus 310 ~~-------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 310 LG-------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HH-------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 52 13556777888889999999999999999988773 45689999999999999999999
Q ss_pred HHHHHhhhh
Q 007582 483 FVDIINAVT 491 (597)
Q Consensus 483 ~~~~i~~~~ 491 (597)
+.+.+....
T Consensus 377 i~g~~l~~~ 385 (428)
T PF13347_consen 377 IVGLLLALV 385 (428)
T ss_pred HHHHHHHHh
Confidence 887765543
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-14 Score=154.98 Aligned_cols=174 Identities=12% Similarity=0.049 Sum_probs=128.9
Q ss_pred chhHHHHHH-HHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccc-----hhHHHHH
Q 007582 14 FRACTFVFV-FSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLS-----RFATCLI 87 (597)
Q Consensus 14 ~~~~~~~~~-~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~G-----r~~~i~~ 87 (597)
++..+.++. ..+.+.+. +.+...+.+++.+++|++.++.+...+...+.-.+-++ .|.++|+ ++ ||+.+++
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHHHHH
Confidence 444444444 56666666 77777888899999999999998888888888777665 9999999 77 7777777
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhH
Q 007582 88 FGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASY 167 (597)
Q Consensus 88 ~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~ 167 (597)
+.++.. ...+..++.. .+......+.+++.+++.+.......++..|..+ +++ ..++..
T Consensus 101 ~~~l~~-~~~~~~l~~~----------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~ 159 (468)
T TIGR00788 101 SGLLGS-AILYGLLPGK----------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSL 159 (468)
T ss_pred HHHHHH-HHHHHhcccc----------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCe
Confidence 776653 1222222210 1123344457889999999999999999999998 432 235567
Q ss_pred HHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHH
Q 007582 168 FNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
.++.+...++|..+++.+++++.+.++|+..|++.+.+.++..+
T Consensus 160 ~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 160 VSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 77777778899999999999998888999999988777665543
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=144.40 Aligned_cols=150 Identities=11% Similarity=-0.020 Sum_probs=136.4
Q ss_pred ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhH
Q 007582 45 EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIA 124 (597)
Q Consensus 45 ~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (597)
+++-++++.|++.+++.+...+..++.|.+.|| +|+|-.+++|.++....+++.++.. ++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~-------------------sy 159 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN-------------------SY 159 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc-------------------hh
Confidence 455677889999999999999999999999999 9999999999999999999999986 45
Q ss_pred HHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHH
Q 007582 125 AYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSV 204 (597)
Q Consensus 125 ~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~ 204 (597)
++++++|.+||+|.+...++..++++|.+|+++ +|++.+++.--++.+|-.+||.+||.+-+..|.+.+|++.++
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence 589999999999999999999999999999765 389999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc
Q 007582 205 ANFIGLIALAAGKCL 219 (597)
Q Consensus 205 ~~~~~~~~~~~~~~~ 219 (597)
+.++...+.++..+.
T Consensus 235 v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 235 VLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHHHHHHheeCc
Confidence 888887776665543
|
|
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-14 Score=141.01 Aligned_cols=116 Identities=16% Similarity=0.012 Sum_probs=104.0
Q ss_pred chhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHH
Q 007582 49 DLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128 (597)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (597)
+..-+|.+-+.|.+..++.++..|.++|+ +|||+++++|.+..++...+.+.+. +...++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~-------------------~F~afv 125 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSR-------------------NFAAFV 125 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHH
Confidence 44567899999999999999999999999 7999999999999999888888876 445788
Q ss_pred HHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec
Q 007582 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 129 ~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (597)
++|++.|+..|-... +.++++|++++++ |+..++....+..+|..+||.+|+++.+
T Consensus 126 ~aR~l~Gi~kgnl~v-~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 126 LARFLGGIFKGNLSV-IRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhhhccCchHH-HHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 889999999987765 7899999999776 9999999999999999999999999977
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-13 Score=145.19 Aligned_cols=172 Identities=12% Similarity=-0.026 Sum_probs=124.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.|..+...+.+..+. ...|+.. ...+.+.+++|++..+.+++.++.... .++.+++|+++|| +|||+++.++.+++
T Consensus 26 Rw~~lva~~~~~~~~-g~~y~fs-v~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr-~G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICT-SFMYAFN-LISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDY-LGPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHH-hCcHHHHHHHHHHH
Confidence 343333333333333 2334333 445577899999999999888774443 3456678999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.+|+++++++.... . ..+.+.+.+.|++.|+|.+...+.....+.+.+| ++ ||+..++..
T Consensus 102 ~iG~ll~ala~~~~--i-----------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~ 161 (591)
T PTZ00207 102 CLGTLLFALTFQEV--I-----------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMK 161 (591)
T ss_pred HHHHHHHHHHhccc--c-----------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHH
Confidence 99999999873200 0 1267789999999999999999999999999997 33 899999999
Q ss_pred HHHHHHHHH-HhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVI-GVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 173 ~~~~~g~~~-~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
.+..+|+++ +++..+++. .+|+..|++.+++.++..
T Consensus 162 ~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 162 TFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHH
Confidence 999999975 555555544 357766666555544333
|
|
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.6e-13 Score=145.85 Aligned_cols=182 Identities=10% Similarity=-0.007 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhh---ccchhHHHH-HHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDT---FLSRFATCL-IFGT 90 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~---~~Gr~~~i~-~~~~ 90 (597)
|.-+.--..++...+.+..+..++..|.++.+|+++..+|.+..+.-+...+.-|+.|+++|| .+||||-.+ ++.+
T Consensus 9 ~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i 88 (460)
T PRK11462 9 KEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL 88 (460)
T ss_pred hHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH
Confidence 333334456666677777777889999999999999999999999999999999999999996 268876655 4556
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
...++.+++...+.... ......+++.-++..++.........++.+|+.++.+ +|.++.++
T Consensus 89 ~~~i~~~llf~~p~~s~-------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~ 150 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSM-------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSW 150 (460)
T ss_pred HHHHHHHHHHhCCCCCc-------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHH
Confidence 67776665553321100 1224556667777788888888889999999998432 39999999
Q ss_pred HHHHHHHHHHHHhhhheeeec-------ccchhHHHHHHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFT-------EKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~-------~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...+.++|..+++.+...+.. ..+|+....+.+++.+++..+.+
T Consensus 151 r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 151 RFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 998888888777665432211 13566655555554444443333
|
|
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-12 Score=137.76 Aligned_cols=174 Identities=14% Similarity=0.070 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHH--HHHHHHHHHhHhhhh-HHHhhhccchhHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNT--LTNFFGSTFLLCLVG-GFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i--~~~~~~~~~~~~~~~-G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
..+....+.+.+.+..+.+.++.|+++ .|.+..+.|.. .++.....++..|+. ++..|| +||||..++.+.+...
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHH
Confidence 344455566666666666777777764 59999999986 455566676666666 668999 8999997666533222
Q ss_pred -HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 95 -ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 95 -g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
......... +. .....+++...++.++..+...+...++..|..++++ ++...+....
T Consensus 82 ~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~~ 140 (390)
T TIGR02718 82 ACLASLALVG--PD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQIA 140 (390)
T ss_pred HHHHHHHcCC--cc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHHH
Confidence 121122111 10 1122344455556667777777777777777766433 6667777777
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+..+|..+|+...+++.+.+|||.+|++.+.+.++..+..+
T Consensus 141 g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 141 GVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 77889999988888888889999999998877665554443
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.8e-12 Score=135.86 Aligned_cols=131 Identities=15% Similarity=0.061 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVML 99 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~ 99 (597)
+....++..+.+-...++++.|+++ .|++..|.|.+.+...+..++.+++.|+++||+..+||.+.+..++..+...+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5556666767777778889999887 469999999999999999999999999999995446777766666555544333
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.... +.+.+++..++..+......|...++.-+...++ +.+-.|-|..+-..
T Consensus 86 ~~~~-------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~--~~~YG~iRlwGSiG 137 (400)
T PF03825_consen 86 AFSS-------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR--GKDYGRIRLWGSIG 137 (400)
T ss_pred HHhc-------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc--cCCCCcchhhhhHH
Confidence 3332 3455666667777777777777777777766532 22334555555543
|
|
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-12 Score=137.89 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=123.3
Q ss_pred cccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCc
Q 007582 42 FKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKG 121 (597)
Q Consensus 42 l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 121 (597)
+.+++++...+.+.+.++|.++.+++.+.+|.|.|| +.-.+.+....+...+-.++.+...
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~------------------ 132 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVH------------------ 132 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 346788889999999999999999999999999999 8966665555555544444444443
Q ss_pred hhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheee------ecccch
Q 007582 122 AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV------FTEKSW 195 (597)
Q Consensus 122 ~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~w 195 (597)
+.+.+++.|++.|+..+...|....+++-.+.+++ |+..+++++....+|.++|.++...+ ....||
T Consensus 133 -s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW 205 (495)
T KOG2533|consen 133 -SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGW 205 (495)
T ss_pred -hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCc
Confidence 56689999999999999999999999999999666 99999999999999999888887664 235689
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcc
Q 007582 196 WLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
|+.|++.+++.++..++.++..|
T Consensus 206 ~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 206 RWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred eeehhHHHHHHHHHHheEEEEec
Confidence 99999999887777766665544
|
|
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.3e-14 Score=150.03 Aligned_cols=175 Identities=13% Similarity=0.020 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHhHHh---HHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGIS---MVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~---~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+++..|+..+..+++..- +-..+.++++.+..+.+|+.++......+..|+.+.+.|| +|.|.+.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHH
Confidence 55666666666666665543 3456678899999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
|.++.+++.++++ +++..=++.|+|.|+........+...|+. +|+.+.++-..+
T Consensus 124 g~~lssF~~~i~~------------------l~lt~gvi~G~G~~~~~~paiviv~~YF~k-------kR~lA~Gia~~G 178 (509)
T KOG2504|consen 124 GLLLSSFATSLWQ------------------LYLTFGVIGGLGLGLIYLPAVVILGTYFEK-------KRALATGIAVSG 178 (509)
T ss_pred HHHHHHHHhhHHH------------------HHHHHHHHhhccchhhhcchhhhhhhHhHH-------HHHHHHhhhhcc
Confidence 9999999974321 334445679999999999999999988762 288999888888
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
..+|.++=|.+..++.+.+|||..+++...+.+-.++..+..+|
T Consensus 179 sG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 179 TGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred CCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888888888888899999999888776655555555554
|
|
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-12 Score=134.44 Aligned_cols=389 Identities=9% Similarity=0.032 Sum_probs=203.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.++.+......++..+++-...++.+.++++..|++.++.|.+.++..+...+..|+.|.++|| +|.||-+++...+..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHH
Confidence 4567777777778778877888999999999999999999999999999999999999999999 896665544433322
Q ss_pred --HHHHHH-HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 94 --LALVML-TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 94 --ig~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
.|.... ...+-.. .-+.++-++.|+..+.......+ +.|.+-++. .++.+-=++-
T Consensus 85 ~l~~pff~~v~~pll~------------------~n~~lg~iig~i~l~~~f~~~~~-~~Ea~~er~---sr~~~feYG~ 142 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQ------------------SNFWLGAIIGGIYLGLVFNAGVP-LSEAYAERV---SRRNGFEYGR 142 (412)
T ss_dssp HTCHHHHHHTHHHHHH------------------TT-HHHHHHTTTTTTTTTTTHHH-HHHHHHHHH---HHHHSS-HHH
T ss_pred HHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcccch-HHHHHHHHH---HHHhcCCcch
Confidence 233332 2221100 01333444444444443332222 123332111 1112223333
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCC
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (597)
..+-..+|.+++..++|++.+ .+-...|++.....++..++.+..++...++.+ ..+
T Consensus 143 ~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~----------------------~~~ 199 (412)
T PF01306_consen 143 ARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAE----------------------VAD 199 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-----------------------SST
T ss_pred HHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhh----------------------hhc
Confidence 445566777777777777754 344677777655544444443333221100000 000
Q ss_pred CchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccc
Q 007582 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQ 330 (597)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (597)
. .+ .+.++.+..|- ++.+ ..|+++..+.+.......+..+.|++
T Consensus 200 ~----~~-------------~~~~~~~~~~~-------------~~l~------k~~~fw~~~l~v~g~~~~Y~vfdqqf 243 (412)
T PF01306_consen 200 A----LG-------------AKKDKVSLKDV-------------LSLF------KMRNFWFFVLFVIGVAAIYDVFDQQF 243 (412)
T ss_dssp T----SS-------------S------HHHH-------------HHHT------TSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c----cc-------------cCCCCCcHHHH-------------HHHh------cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00000000000 0000 01233333333333323333333333
Q ss_pred h-hHHhhhhhcCCCCCcccccCCcccchhh---HHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 007582 331 T-FSITQGAAMDPHLGSIKVPTSSIPVIPL---LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTV 406 (597)
Q Consensus 331 s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~ 406 (597)
+ ++..+- +.. +..+..++..+. +.-.+...+..+++.+++.|+. +.++..++++=...
T Consensus 244 ~~y~~~~f---~~~----~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~-----------Lllag~i~~iRi~~ 305 (412)
T PF01306_consen 244 PIYFASFF---QSA----GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL-----------LLLAGVIMAIRIIG 305 (412)
T ss_dssp HHHHHHTS---SSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHh---ccc----ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH-----------HHHHHHHHHHHHHH
Confidence 3 222211 110 111122222333 3333344445555555555543 44555555554444
Q ss_pred HHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHH-HHHHHHHHHHHHHHHH
Q 007582 407 AGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFT-YLSLSFGYFLSSAFVD 485 (597)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~-~~~~~l~~~i~~~~~~ 485 (597)
.++. .+.+++++.=.+-++-.........-|+.+.+|++..++...+. .+..+++..+.+.+.+
T Consensus 306 ~~~~---------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G 370 (412)
T PF01306_consen 306 SGFA---------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAG 370 (412)
T ss_dssp HHT-----------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred Hhhh---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 4432 34456666666777777788888899999999999999888885 6788899988888888
Q ss_pred HHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 486 IINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAW 536 (597)
Q Consensus 486 ~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~ 536 (597)
.+.+.. +++..|++++++.++..++-++..++
T Consensus 371 ~lyd~~-------------------G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 371 YLYDRI-------------------GFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hhHhhc-------------------CcHHHHHHHHHHHHHHHHHheeeecC
Confidence 776532 23446888888877777776666543
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-12 Score=133.58 Aligned_cols=367 Identities=13% Similarity=0.039 Sum_probs=223.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc---cchhH-HHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF---LSRFA-TCLIF 88 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~---~Gr~~-~i~~~ 88 (597)
..|.-..--...+...+.+..+..++..|.++.+|+++..+|.+..+--+...+.-|+.|.+.||. +||+| =++++
T Consensus 10 s~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 10 SLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred cHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH
Confidence 344444455667777788888899999999999999999999999999999999999999999963 56555 45566
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.+.+.+.+.++..++.+.. .......++-.++.+++..++...-.++.+|+.++. + +|.+..
T Consensus 90 ~ip~~i~~~l~F~~p~~~~-------------~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~--~---ER~~l~ 151 (467)
T COG2211 90 AIPFAIVAVLLFITPDFSM-------------TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDP--Q---ERASLT 151 (467)
T ss_pred hHHHHHHHHHHHcCCCccc-------------CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCH--H---HHHHHH
Confidence 6778888887777653211 234556677778899999999999999999998743 2 499999
Q ss_pred HHHHHHHHHHHHHHhhhheeee-----c--ccchhHHHHHHHHHHHHHHHHHHhhccceee-cCCCCChhHHHHHHHHHH
Q 007582 169 NFYLLATTVAAVIGVTGIVYVF-----T--EKSWWLGFLVSSVANFIGLIALAAGKCLYRI-QQPGESPLVRVAQVLVVA 240 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~-----~--~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (597)
++-+...++|..+...+...+. . ..||+..-.+.+++..+..++.+...+|... ..+.++
T Consensus 152 s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~------------ 219 (467)
T COG2211 152 SWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT------------ 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc------------
Confidence 9999999999776655443221 2 4577777666666655555554443322111 100000
Q ss_pred HHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHH
Q 007582 241 IKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTI 320 (597)
Q Consensus 241 ~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 320 (597)
..+.++.|... .....|.++..+... .
T Consensus 220 --------------------------------~~~~~~~~~~~------------------~~~~Nrp~~~~l~~~---l 246 (467)
T COG2211 220 --------------------------------GVKLKLKDSFL------------------LIFKNRPLLLLLLMN---L 246 (467)
T ss_pred --------------------------------cccccHHHHHH------------------HHHccchHHHHHHHH---H
Confidence 00000000000 000011111111111 1
Q ss_pred HhHhhhcccchhHHhhhh-hcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHH
Q 007582 321 LMNTCLAQLQTFSITQGA-AMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVL 399 (597)
Q Consensus 321 ~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~ 399 (597)
++++..+...+..+++.. .++.. ...+...........++..++.-++..++++|+. +.+|.++
T Consensus 247 ~~~~~~~i~~s~~~yy~~y~lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~-----------~~~~~~~ 311 (467)
T COG2211 247 LLFIAFNIRGSIMVYYVTYVLGDP----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL-----------FLIGLLL 311 (467)
T ss_pred HHHHHHHHHhhhhheeEEEEcCCh----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH-----------HHHHHHH
Confidence 112221111122222110 11111 1112222222233333334555556555565553 5677777
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhcc-------CcchhhHHHHHHHHH
Q 007582 400 SAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEA-------PAGMKTLASSFTYLS 472 (597)
Q Consensus 400 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------P~~~r~~~~~~~~~~ 472 (597)
.+++.+...+.. ..+.+.+++..++.+++.....+..|+.+.+.. -.+..|...|..+++
T Consensus 312 ~~i~~~~~~f~~-------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 312 LAVGYLLLYFTP-------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred HHHHHHHHHhhc-------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 777766666541 234455566667888999999999999998754 355667788889999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 007582 473 LSFGYFLSSAFVDIINAV 490 (597)
Q Consensus 473 ~~l~~~i~~~~~~~i~~~ 490 (597)
.-++..++..+.+.+...
T Consensus 379 ~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 379 RKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888876543
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-11 Score=121.82 Aligned_cols=161 Identities=9% Similarity=0.051 Sum_probs=137.8
Q ss_pred HHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 27 ENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSK 106 (597)
Q Consensus 27 ~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~ 106 (597)
-|-..- ....+.+.+.+++|++.+++|.++++=.+.-.+.++++.+++.| +|-.|++.++.++.++|.++-....
T Consensus 24 LR~~it-svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~~--- 98 (395)
T COG2807 24 LRPAIT-SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLGG--- 98 (395)
T ss_pred cchhhh-hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhccc---
Confidence 344433 33455567889999999999999999999999999999999999 8999999999999999999877652
Q ss_pred cCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 007582 107 NLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
...++.+-.+.|.|++......|..+-+-||.+ -+..++.|....++|+.+++...
T Consensus 99 -----------------~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~la 154 (395)
T COG2807 99 -----------------LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALA 154 (395)
T ss_pred -----------------HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhh
Confidence 346899999999999999999999999999944 57999999999999999999888
Q ss_pred eeeeccc-chhHHHHHHHHHHHHHHHHHHhh
Q 007582 187 VYVFTEK-SWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 187 ~~~~~~~-~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
..+.++. +||....+-+.+.+++++++++.
T Consensus 155 vpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 155 VPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 8887665 79999888888888888777654
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-13 Score=146.65 Aligned_cols=176 Identities=13% Similarity=0.111 Sum_probs=129.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++.....+...++..+.+|++..+++.|+++.+|++..+.+.+.....++..++.+++|+++|| +|||+++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 34444445555566778899999999999998899998888888888889999999999999999 89999998888765
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.+....... ..+..++++++++.|++.+...+..+.+..|.+|++. |++.+++.+
T Consensus 327 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~ 384 (490)
T PRK10642 327 FVLAIPAFILIN----------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAF 384 (490)
T ss_pred HHHHHHHHHHHh----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHH
Confidence 544433222111 1134567888999988887777778888999999877 999999755
Q ss_pred HHHHHHHHHHhhhheeeeccc-chhHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEK-SWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~-~w~~~f~i~~~~~~~~~~ 211 (597)
....+++.++|.+.+++.+.. +|+.++++..+..+++++
T Consensus 385 ~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 385 NISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 445566678888888776543 467666554444444433
|
|
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.6e-10 Score=119.48 Aligned_cols=90 Identities=13% Similarity=0.114 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCc
Q 007582 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKN 510 (597)
Q Consensus 431 ~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~ 510 (597)
+.+.-++.|+..+...+..-++..++.|++..+...|++.++....+++|+.+.+.+.+.+.+
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~----------------- 445 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS----------------- 445 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------------
Confidence 333445778888899999999999999999999999999999999999999999998765432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007582 511 NVNLFYWFLAIVSVLNLVLYLYAAAWYKY 539 (597)
Q Consensus 511 ~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 539 (597)
..+-+....++.++++++.+ +.+..|+
T Consensus 446 -~r~g~~~l~~lf~~gl~ll~-~v~~~~g 472 (477)
T PF11700_consen 446 -QRYGFLFLLVLFLIGLILLF-FVDVEKG 472 (477)
T ss_pred -chhHHHHHHHHHHHHHHHHh-hccchhh
Confidence 23346666666666666553 3443333
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.1e-12 Score=128.12 Aligned_cols=179 Identities=17% Similarity=0.147 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc-chhHHHHH-HHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL-SRFATCLI-FGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~-Gr~~~i~~-~~~~~ 92 (597)
|.+|++++.+++..+..|++..+.+.|+.+..|+|..++++..+.|..++..+++++||++||++ |||...-+ +.+..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999998 77655443 33333
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
+++.+..-.++ .+++.+..+..+++|+-.-+....+-....|..|.+. -|.+.++..
T Consensus 332 ~~~~~~~w~~~-----------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~G 388 (448)
T COG2271 332 TASLVLYWLAP-----------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVG 388 (448)
T ss_pred HHHHHHHHcCC-----------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhh
Confidence 34444444443 2366788888889999988888888888999999555 788888888
Q ss_pred HHHHH-HHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 173 LATTV-AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 173 ~~~~~-g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
++..+ |+.++....+++.+.+||...|.+-.+..+++.++++..
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 77767 999999999999888999999988777766666555543
|
|
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.1e-12 Score=132.25 Aligned_cols=175 Identities=17% Similarity=0.093 Sum_probs=133.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+++..+......++....++....+++.|+++.+|++..+.+.+.+...++..++.+++|+++|| +|||+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHH
Confidence 44444444444455555555666788889999999999999998888778888899999999999 89999888776655
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.+......... +...+++.+++.+++.|...+..+.+..|.+|+ + |++..++++
T Consensus 293 ~~~~~~~~~~~-------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~ 346 (393)
T PRK15011 293 VCFYAGMLMAH-------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYT 346 (393)
T ss_pred HHHHHHHHHHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHH
Confidence 54433333222 345667788888888877777778888898873 3 789999998
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...++|..+++.+++++.+.++|+..|.+..++.++++++.+
T Consensus 347 ~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 347 NTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998888999999887777666665544
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-11 Score=134.04 Aligned_cols=176 Identities=14% Similarity=0.093 Sum_probs=132.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.+|.+.+..++....++++..+++.|+++.+|++..++++..+.+.++..++.+++|+++|| +|||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHH
Confidence 457777888888888888889999999999999999999999999999999999999999999 8999887766554444
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+..+..... ..+....++.+++.|++.............|.+|++. |++..++.+..
T Consensus 337 ~~~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~ 393 (467)
T PRK09556 337 IFTLGVYQH-----------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHh-----------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHH
Confidence 333222221 1133455677777776544333333466779999666 99999999888
Q ss_pred HHH-HHHHHhhhheeeec------------ccchhHHHHHHHHHHHHHHHHHH
Q 007582 175 TTV-AAVIGVTGIVYVFT------------EKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 175 ~~~-g~~~~~~~~~~~~~------------~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.++ |..++|.+.|++.+ ..+|+..|.+..+..+++.+..+
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 886 77899999888877 56799999887666665544433
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-11 Score=128.05 Aligned_cols=170 Identities=15% Similarity=0.086 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
..+......++..+..+......++|. ++++.+..+.+.+.+.+.++..++.++.|++.|| +|||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHH
Confidence 444444455555555555556666664 5688888889999999999999999999999999 89999999999888888
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.++....+.. +...+++..++.|++.|...+..+.+.+|.+|+++ |++.+++++...
T Consensus 284 ~~~~~~~~~~-----------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 340 (377)
T TIGR00890 284 MAAMLFIPML-----------------NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAK 340 (377)
T ss_pred HHHHHHcccc-----------------hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHH
Confidence 7776654311 22334566778899999888888999999999766 999999999999
Q ss_pred HHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 176 TVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
++|..++|.+.+++.+..||+..|.+.+++.++++
T Consensus 341 ~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999998888899999988776655543
|
|
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=137.12 Aligned_cols=133 Identities=14% Similarity=0.034 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHH
Q 007582 55 NTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLY 134 (597)
Q Consensus 55 ~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 134 (597)
....+..++..++.+++|+++|| +|||+++.++.++..++.++.+++. +...+++.+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~-------------------s~~~ll~~~~l~ 658 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN-------------------SESAMIALLCLF 658 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc-------------------cHHHHHHHHHHH
Confidence 33445668889999999999999 8999999999998888887777654 233566777888
Q ss_pred HhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 135 SFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 135 g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
|++.++..+...++++|++|++. |++.+++.+....+|++++|++++++... +...+|.+.+++.+++.++.+
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999665 99999999999999999999998877553 446677777666655554444
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.5e-11 Score=124.00 Aligned_cols=173 Identities=20% Similarity=0.206 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhH-HHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFA-TCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~-~i~~~~~~~~ 93 (597)
|.++......++..........+.+.++.+.+|.+..+.+.+.....++..++.++.|++.|| +|||+ .+.++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHH
Confidence 556667777888888888888899999988889999999999999999999999999999999 89999 9999999988
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++.++..... +...+++..++.|++.+...+....++.|..|+++ |++.++.++.
T Consensus 254 i~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 308 (352)
T cd06174 254 LGLLLLALAP-------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNT 308 (352)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHH
Confidence 8888877654 34578889999999999999999999999999655 9999999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
..++|..+++.+.+++.+..+|+..|.+..++.+++.++.
T Consensus 309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999888899999998888776666543
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=116.01 Aligned_cols=156 Identities=12% Similarity=0.195 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHH--HHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMV--LYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~--~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+++..+.++.++...+|+.--...+ .+++.+.+.+.++..++.+.|..-..+.++++||+.||.+|-|..-.+-+++.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 4555566666666555555444433 45566777777788889999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
++|-++.+.-.. .++.+++.+||++.|+|.-....+-..|....|..++ .+..+++.-
T Consensus 121 ~~GqliFa~Ggi----------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlql 178 (459)
T KOG4686|consen 121 FLGQLIFAAGGI----------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQL 178 (459)
T ss_pred HHHHHHHHhchH----------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHH
Confidence 899888775432 3478899999999999998888888999999998766 889999988
Q ss_pred HHHHHHHHHHhhhheeeecc
Q 007582 173 LATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~ 192 (597)
....+|+.+-..+.+++.+.
T Consensus 179 SvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 179 SVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHhhceeeeeecHHHHHH
Confidence 88888887766666655443
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.7e-11 Score=127.06 Aligned_cols=165 Identities=18% Similarity=0.112 Sum_probs=129.7
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
.++..+.++.+..+++.|+.+ .|. .+.+...+.+.++..++.++.|++.|| +|||+.+.++.++..++.++....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhc
Confidence 344455666777788888764 354 345666677888888999999999999 8999999988888888777666543
Q ss_pred hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh
Q 007582 104 YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183 (597)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 183 (597)
+...+++++++.|++.+...+.......|.+|++. |++.+++++...++|..+++
T Consensus 301 -------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~~ 355 (399)
T PRK05122 301 -------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGITG 355 (399)
T ss_pred -------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 34466778899999999888888888888888555 99999999999999999999
Q ss_pred hhheeeecccchhHHHHHHHHHHHHHHHHHHhhc
Q 007582 184 TGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 184 ~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
.+.+++.+..||+..|.+.+.+.++++++.....
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 356 PLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888888999999888777666665544433
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=127.61 Aligned_cols=171 Identities=12% Similarity=0.093 Sum_probs=135.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.+.++.+....++.....+++..+++.|+++.+|++..+++.+.+.+.++..++.+++|+++|| +|||+.+..+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLAL 282 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHH
Confidence 3455666666777777888899999999999999999999999999999999999999999999 899999888776666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++..+..... +..++.+..++.|++.+...+...++..|..|.+ +++..++...
T Consensus 283 ~~~~~~~~~~-------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~ 336 (394)
T PRK03699 283 VLMYLFVNTD-------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILT 336 (394)
T ss_pred HHHHHHHHcC-------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHH
Confidence 6544444332 2334556677888888888888888888877632 4556777778
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
..++|..++|.+.+++.+..|++..+++..++.+++.+
T Consensus 337 ~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 337 CGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 88999999999999998888999998877666555543
|
|
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.7e-11 Score=123.68 Aligned_cols=171 Identities=15% Similarity=0.037 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
.+.+....++.....+.....++.|+.+++|.+..+.+.+.+...+...++.+++|++.|| +|||+++.++.++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHH
Confidence 3333444444444455556677889888999999999988888777778888999999999 899999988776655544
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
++....+ +.+.+++.+++.|++.|...+....+..|..|+ + +++.+++++...+
T Consensus 280 ~~~~~~~-------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 280 TGLAADN-------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGR 333 (375)
T ss_pred HHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHH
Confidence 4433332 345667788889999988888888888998873 2 5689999999999
Q ss_pred HHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 177 VAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+|..++|.+.+++.+..+|+..|++.+++.+++.++..
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999988888999999888777666665443
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=109.60 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=112.1
Q ss_pred HHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhc
Q 007582 58 TNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFG 137 (597)
Q Consensus 58 ~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g 137 (597)
+.+.++..++.++.|++.|| +|||+.+..+..+..++.++..... +.+.+.+.+++.|++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~ 64 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS-------------------NITVLIIARFLQGFG 64 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHH
Confidence 45567888899999999999 8999999999988888887776653 456788889999999
Q ss_pred cccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 138 CGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 138 ~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.+...+....+..|.+|+++ |++..++.+...++|..+++.+.+++.+..+|+..|.+.....++..+....
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 65 AAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999766 9999999999999999999999998888889999988877665555544443
|
|
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-09 Score=111.58 Aligned_cols=159 Identities=10% Similarity=-0.048 Sum_probs=110.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHH--hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGI--SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~--~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
.+|+-.+++...++..-..+..++ .+..|..+.++ +...+.|...+|+..+....+.+-|+.|| +|-|.+.+++.+
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ 117 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTV 117 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHH
Confidence 444444444444444333222322 34456777777 66677899999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+.++|+.+-.++.. |++. +.-.....+.|-.+.+.+.-.+....+-..+-.|++++ |..+...
T Consensus 118 ln~iGa~Ir~iss~-p~v~----------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~ 180 (480)
T KOG2563|consen 118 LNGIGAWIRLISSL-PFVP----------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVL 180 (480)
T ss_pred HHHHHHHHhhhccC-cccc----------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhH
Confidence 99999998777642 2211 01112377888888888877766655555566678766 8788777
Q ss_pred HHHHHHHHHHHHhhhheeee
Q 007582 171 YLLATTVAAVIGVTGIVYVF 190 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~ 190 (597)
-.++.-+|.+++.++...+.
T Consensus 181 ~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 181 GVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred HHhcchHHHHHHhhccceec
Confidence 77777777777777666554
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=124.35 Aligned_cols=180 Identities=11% Similarity=-0.039 Sum_probs=129.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+++....+....++..+.+|.+.++++.|+++.+|++......+.........++.++.|+++|| +|||+++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHH
Confidence 34444445556777788899999999999999999988766555556666777888999999999 89999998887766
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.+........ ......+++..++.+++.+...+..+++++|.+|++. |+...++.+
T Consensus 327 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~ 385 (438)
T PRK09952 327 TLSAFPFFMALEA---------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHHHc---------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHH
Confidence 5554433332110 1123344555667788888888889999999999765 888888855
Q ss_pred -HHHHHHHHHHhhhheeeecc--cchhHHHHHHHHHHHHHHHHHH
Q 007582 173 -LATTVAAVIGVTGIVYVFTE--KSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~~~--~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.+..+|+.++|.+.+++.+. .+|+.++.+.++..+++.+..+
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 44568999999999888653 2478777766666555554443
|
|
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-11 Score=126.04 Aligned_cols=179 Identities=12% Similarity=-0.007 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCc--------hhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFD--------LAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~--------~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
++......++..........+.+.|+++ .+.+ ....+.+.++..++..++.++.|+++|| +|||+++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~ 287 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLS 287 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHH
Confidence 3445555555555555566677777754 3433 3556888888899999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..++..+....... ..+...+++.+++.|++.+...+....+++|.+|++. |++.+
T Consensus 288 ~~~~~v~~~l~~~~~~~---------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~ 346 (418)
T TIGR00889 288 LVAWALRFGFFAYGDPE---------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQ 346 (418)
T ss_pred HHHHHHHHHHHHHcCcc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHH
Confidence 99888887666653210 0124567788999999999999999999999999655 99999
Q ss_pred HHHH-HHHHHHHHHHhhhheeeecc------cchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 169 NFYL-LATTVAAVIGVTGIVYVFTE------KSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 169 ~~~~-~~~~~g~~~~~~~~~~~~~~------~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
++.+ ....+|..+||.++|++.+. +||+..|.+.+++.+++.+++.+..+
T Consensus 347 g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 347 GLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9997 56789999999999988765 46999998887776666655555444
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-10 Score=120.55 Aligned_cols=155 Identities=15% Similarity=0.104 Sum_probs=127.1
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHccc-ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccch-hHHHHH
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKN-EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSR-FATCLI 87 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr-~~~i~~ 87 (597)
.+.+||.+++.....++..+.++.+.+.+-+|+++ |.+-+.+.-|+++++..++..++.+..|+...| .|+ |+-+++
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~ 107 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIV 107 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHH
Confidence 36689999999999999999999888889999876 567777888999999999999999999999999 675 777788
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhH
Q 007582 88 FGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASY 167 (597)
Q Consensus 88 ~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~ 167 (597)
|.++.++|.++.......| .+..++++++|++.|+|.|.. +..-.|+++....++ |.|+
T Consensus 108 s~ii~~~g~llY~~l~~~~--------------~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R~rA 166 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVP--------------NGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------RPRA 166 (488)
T ss_pred HHHHHHHHHHHHHHHHhcc--------------cchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------hHHH
Confidence 9999999999984433333 225788999999999998755 448899999887666 7788
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 007582 168 FNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 168 ~~~~~~~~~~g~~~~~~~~ 186 (597)
++....+..+|..+||.+.
T Consensus 167 ~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 167 FAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHhhhHHHHHHHHhHHHH
Confidence 8877666666666666654
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.5e-11 Score=124.75 Aligned_cols=168 Identities=14% Similarity=0.084 Sum_probs=131.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.++.+....++....++.+..+++.|+++++|.+..+.+.+.....++..++.+++|+++|| +|||+.+.++..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHH
Confidence 446777777888888888899999999988899999999999999999999999999999999 8999988866655544
Q ss_pred HHH-HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH-H
Q 007582 95 ALV-MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY-L 172 (597)
Q Consensus 95 g~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~-~ 172 (597)
... +...... ..+...++...++.|++.+...+...++++|.+|++. |++.++.. .
T Consensus 298 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~ 355 (394)
T TIGR00883 298 LAVPLLMALLD----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYN 355 (394)
T ss_pred HHHHHHHHHhc----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhH
Confidence 332 2221110 1134566677888999999999999999999999776 88888874 4
Q ss_pred HHHHHHHHHHhhhheeeecccc-hhHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVA 205 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~ 205 (597)
....+|..++|.+++++.+..+ |+..++..+..
T Consensus 356 ~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 356 LAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred hHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 5667899999999999888777 77665554443
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.3e-10 Score=125.05 Aligned_cols=174 Identities=15% Similarity=0.056 Sum_probs=135.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc-cchhHHHHHHHHHH-
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF-LSRFATCLIFGTLE- 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~-~Gr~~~i~~~~~~~- 92 (597)
+.++..+...++..+.+++...+++.|+++ +|++..+++.+.++..++..++.+++|+++||+ +++|+...++..+.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 446666677777778888888899999865 799999999999999999999999999999972 33444444433332
Q ss_pred -HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 93 -VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 93 -~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
.++.++..... +.+.+++.+++.|++.++..++..+++.|.+|+++ +++.++++
T Consensus 320 ~~l~~ll~~~~~-------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~ 374 (455)
T TIGR00892 320 NGLTHLLCALAG-------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLV 374 (455)
T ss_pred HHHHHHHHHHhc-------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHH
Confidence 23333333332 45567888999999999999999999999998665 89999999
Q ss_pred HHHHHHHHHHHhhhheeeeccc-chhHHHHHHHHHHHHHHHHHH
Q 007582 172 LLATTVAAVIGVTGIVYVFTEK-SWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~-~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+...++|..+||.+++++.+.. +|+..|.+.+++.+++.+...
T Consensus 375 ~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 375 TIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 9999999999999999998776 599999888777665554433
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-10 Score=122.59 Aligned_cols=166 Identities=10% Similarity=-0.028 Sum_probs=128.4
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchh---hHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLA---GASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLT 100 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~---~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~ 100 (597)
.++..+....+.+.++.|+.+..+.... ..+.+.+++.++..++.+..|+++|| +|||+++.++.++..++.++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHH
Confidence 3444445455667777787765442221 23555666677888889999999999 8999999999887777666655
Q ss_pred HHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHH
Q 007582 101 IQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAV 180 (597)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (597)
... +.+.+++.+++.|++.|...+...+++.+..|++. |++.+++++...++|..
T Consensus 307 ~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 307 FVQ-------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIGNV 361 (408)
T ss_pred Hhc-------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHHHH
Confidence 443 34567788899999999999999888888888665 89999999999999999
Q ss_pred HHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 181 IGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 181 ~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
+||.+++++.+..+|+..|.+.+++.+++.++.+.
T Consensus 362 ~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 362 TGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999988877766655543
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.3e-10 Score=118.54 Aligned_cols=174 Identities=8% Similarity=-0.104 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
++......++.....++...++++|+.+.+|.+..+.+++.+.+.++..++.++.|+++|| +|||+. .++..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~-~~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHH-HHHHHHHHHHH
Confidence 3444555556666777777888889988899999999999999999999999999999999 798764 44444444443
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
.+..... .+...+++..++.|++.+...+...+.+.+..| +. |++.++++....+
T Consensus 285 ~~l~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~ 339 (390)
T PRK03545 285 LLLLPAA------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHh------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHHH
Confidence 3332221 134566777888999988887878888888766 33 7899999988899
Q ss_pred HHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhc
Q 007582 177 VAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
+|..+|+.++|++.+.++++..|.+.+.+.++++++.....
T Consensus 340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999998888777766655433
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=121.89 Aligned_cols=161 Identities=20% Similarity=0.212 Sum_probs=129.2
Q ss_pred HHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007582 25 ALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAY 104 (597)
Q Consensus 25 ~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~ 104 (597)
++....+..+..+.+.|+.+ .+.+ +.+.....+.++..++.++.|++.|| +|||+.+.++..+..++.++.....
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc-
Confidence 34445566677777788765 3544 34566667777888999999999999 8999999999988888877666543
Q ss_pred cccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 007582 105 SKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184 (597)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 184 (597)
+...+++.+++.|++.+...+...+...|.+|+++ |++.+++++...++|..++|.
T Consensus 301 ------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 301 ------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred ------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 34466778899999999888888888899988655 999999999999999999999
Q ss_pred hheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 185 GIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 185 ~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+.+++.+..||+..|.+.+.+.+++.++.+
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 357 LAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 999998888999999988877666665544
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.8e-10 Score=123.97 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc--chhHHH-HHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL--SRFATC-LIFGTL 91 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~--Gr~~~i-~~~~~~ 91 (597)
+.+|...+..++.....|++..+++.|+++..|++..+++.+...+.++..++.+++|+++|| + |||+.. .+...+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHH
Confidence 446667777777778888999999999999999999999988888999999999999999999 7 555432 222333
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
..++.++..+.. ..+....++..++.|.+..........+..|.+|++. |++.+++.
T Consensus 332 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 388 (452)
T PRK11273 332 VTIATIVYWLNP-----------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 388 (452)
T ss_pred HHHHHHHHHHhc-----------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHH
Confidence 333333322221 0122333444455555433322333456779999766 99999999
Q ss_pred HHHHHHHHHH-HhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 172 LLATTVAAVI-GVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 172 ~~~~~~g~~~-~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+...++|+.+ +|.+.+++.+..||+..|.+.....+++++...
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888654 789999998888999999887777666655444
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.5e-10 Score=117.68 Aligned_cols=176 Identities=16% Similarity=0.054 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHH-HHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATC-LIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i-~~~~~~~~ 93 (597)
|.++..+...++.....+.+..+.+.|+.+.+|.+..+.+++.+...++..++.+++|+++|| +|||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHH
Confidence 456677778888888888899999999999999999999999999999999999999999999 8998621 11111112
Q ss_pred HHHHH---HHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 94 LALVM---LTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 94 ig~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
++.++ ....... .......+....+.+++.+ ..+...++.+|.+|+++ |++.+++
T Consensus 294 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATNY---------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhcc---------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHH
Confidence 22111 1111110 1122333333444444444 78889999999999766 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~ 213 (597)
.+...++|..++|.+.+++.+..+ |+..|.+.+++.+++.++.
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888 9988888777666555443
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.2e-10 Score=119.22 Aligned_cols=166 Identities=11% Similarity=-0.064 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVML 99 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~ 99 (597)
+....++....++.+..+++.|+.+ .|.+..+.+.+.+.+.++..++.++.|+++|| +|||+.+.++.+...++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH
Confidence 3344455556677777888888865 69999999999999999999999999999999 899999888766665555544
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAA 179 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (597)
.... +...+.+..++.|++.++..+...++..|.+|+++ |++..++.+....+|.
T Consensus 303 ~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 303 AAAP-------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLGS 357 (406)
T ss_pred HhcC-------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHHH
Confidence 4332 23345566677888888888888999999999776 9999999999999999
Q ss_pred HHHhhhheeeeccc-chhHHHHHHHHHHHHHHHH
Q 007582 180 VIGVTGIVYVFTEK-SWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 180 ~~~~~~~~~~~~~~-~w~~~f~i~~~~~~~~~~~ 212 (597)
.++|.+.+++.+.. +|...+.+...+.+++.++
T Consensus 358 ~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 358 MAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 99999999887653 4565665555554444433
|
|
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-10 Score=124.87 Aligned_cols=149 Identities=17% Similarity=0.145 Sum_probs=116.3
Q ss_pred HhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 33 ANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 33 ~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
.+..+++.|+++++|++..+++.+.+.+.++..++.+++|+++|| +|||+.+.++.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 466788999988999999999999999999999999999999999 8999998888766665554433322
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 192 (597)
..+.+.+.+..++.++...+..+..+.++.|.+|++. |++.+++++...++|..++|++++++.+.
T Consensus 363 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 363 --------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred --------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 1123334444444444334456778889999999665 99999999999999999999999999988
Q ss_pred cchhHHHHHHHHH
Q 007582 193 KSWWLGFLVSSVA 205 (597)
Q Consensus 193 ~~w~~~f~i~~~~ 205 (597)
+||+..+.+....
T Consensus 429 ~g~~~~~~~~~~~ 441 (496)
T PRK03893 429 LDLGTALASLSFS 441 (496)
T ss_pred CChHHHHHHHHHH
Confidence 8988777554433
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.2e-10 Score=117.55 Aligned_cols=162 Identities=15% Similarity=0.122 Sum_probs=124.9
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
.++..+.+.....+++.|+++ .|.+..+.+.+.+.+.++..++.++.|++.|| +|||+.+..+..+..++.++.. ..
T Consensus 209 ~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-~~ 285 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-SQ 285 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-hh
Confidence 333334445566678888865 58888899999999999999999999999999 8999999888887777665443 11
Q ss_pred hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh
Q 007582 104 YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183 (597)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 183 (597)
......+++.|++.+...|...+++.|..|+++ ++...+.+....++|..++|
T Consensus 286 ---------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 286 ---------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred ---------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 123456677788777788888888899887544 66777777788899999999
Q ss_pred hhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 184 TGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 184 ~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.++|++.++.+|++.|.+.+.+.++..++.+.
T Consensus 339 ~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 339 SFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 99999988889999998877776666544443
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.9e-10 Score=120.62 Aligned_cols=175 Identities=21% Similarity=0.125 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc--c-hhHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL--S-RFATCLIFGTLE 92 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~--G-r~~~i~~~~~~~ 92 (597)
.++.+....++....++++..+++.|+.+++|++..+++...+.+.++..++.+++|+++|| + + |++......+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGI 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHH
Confidence 35555556666667777888899999988899999999999999999999999999999999 6 2 233222222111
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.+..+....... .+.....+..+..|++.....+....+.+|.+|++. |++..++.+
T Consensus 323 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 379 (434)
T PRK11663 323 LLSVGSLWLMPF-----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG 379 (434)
T ss_pred HHHHHHHHHccc-----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence 222211111111 012233333344444332222233456788888555 999999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...++|..++|.+.+++.+..||+..|.+.+++.++..+...
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888999999887777666554444
|
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-10 Score=117.68 Aligned_cols=176 Identities=8% Similarity=-0.029 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+..+.+....++..++++++..+++.|+.+ +|.+..+++...+.+.++..++.++.|+++|| +|||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHH
Confidence 345555566667778888999999999976 79999999999999999999999999999999 8999999998877777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++....+. +...+. .++.|++.|...+.......+.++++ +.|++.+++.+..
T Consensus 283 ~~~~~~~~~~------------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~-----~~~g~~~g~~~~~ 337 (393)
T PRK09705 283 GFCGFIWLPL------------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQP-----AIAGKLVAFMQGI 337 (393)
T ss_pred HHHHHHHccc------------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCH-----HHHHHHHHHHHHH
Confidence 7665543321 111122 24678888888887777777887532 1289999999999
Q ss_pred HHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHHhhc
Q 007582 175 TTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
.+++..++|.+.+++.+..| |...|.+.....++..+......
T Consensus 338 ~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 338 GFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999988765 77888776666555544444433
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.8e-10 Score=120.10 Aligned_cols=157 Identities=14% Similarity=0.065 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVML 99 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~ 99 (597)
.....++.....+++..+++.|+.+++|++..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHH
Confidence 3333444445555677788999999999999999999999999999999999999999 899999988876553322222
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAA 179 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (597)
.... .+.+.+.++.++.+++.+...+..++++.|.+|++. |++.+++.+...++|.
T Consensus 322 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~ 377 (405)
T TIGR00891 322 FAIG------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLGG 377 (405)
T ss_pred HHhC------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHHH
Confidence 1111 134456666677777777888889999999999776 9999999999999999
Q ss_pred HHHhhhheeeecccc-hhHHHHH
Q 007582 180 VIGVTGIVYVFTEKS-WWLGFLV 201 (597)
Q Consensus 180 ~~~~~~~~~~~~~~~-w~~~f~i 201 (597)
.++|.+.+++.+..| |+..+..
T Consensus 378 ~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 378 ALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHhccccchhHHh
Confidence 999999999988877 7765544
|
|
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.1e-10 Score=120.77 Aligned_cols=159 Identities=11% Similarity=-0.054 Sum_probs=129.2
Q ss_pred HHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 007582 31 FIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHP 110 (597)
Q Consensus 31 ~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~ 110 (597)
.+++..+.+.|+++.+|.+..+.+++.+.+.++..++.++.|++.|| .++++.+..+.++..++.++....+
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHccc-------
Confidence 45677788889988899999999999999999999999999999999 7888888888887777776665443
Q ss_pred CCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeee
Q 007582 111 PDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF 190 (597)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 190 (597)
+.....++.++.|++.+...+...+++.|..|++. |++.+++++...++|..+|+.+.|++.
T Consensus 311 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 311 ------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 34456677888899888877878889999999555 999999999999999999999999998
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHh
Q 007582 191 TEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 191 ~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
+.++.+..+.+.+...++..++...
T Consensus 373 ~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 373 AMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHhchhhHHHHHHHHHHHHHHHHHH
Confidence 8888887777666554444444433
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.8e-10 Score=117.08 Aligned_cols=176 Identities=11% Similarity=0.019 Sum_probs=130.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH-HHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL-IFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~-~~~~~~~ 93 (597)
|.++......++....+++...+.+.|++ ++|++..+.+.+.+.+.++..++.++.|+++|| +|||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHH
Confidence 44566667777888888999999998885 489999999999999999999999999999999 89988764 3333333
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++.+.+....... .++....++..++.|++.+...+. .....|..| ++ |++.+++++.
T Consensus 300 ~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~~~g~~~~ 357 (402)
T TIGR00897 300 IFTLALYYIPQHF--------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGAAMSVLNL 357 (402)
T ss_pred HHHHHHHHHHHcc--------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHHHHHHHHH
Confidence 3333333221100 113445667778888888776553 455666544 33 8999999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
..++|..++|.+++++.+..||...|++.+++.+++.++..
T Consensus 358 ~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 358 SAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999998888777666555443
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.7e-10 Score=116.30 Aligned_cols=170 Identities=9% Similarity=-0.060 Sum_probs=142.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.|.++..+...++...+.+...++.++|+++ +|.+..+.+.+.+...++..++.++.|++.|| +|+|+.+.++.+...
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACV 281 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHH
Confidence 3556667777788888888899999999965 89999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH-
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL- 172 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~- 172 (597)
++.++++.++ +.+.+++..++.|+..|...+....++.+. |+++ |++..++++
T Consensus 282 ~~~~~~~~~~-------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~ 335 (382)
T TIGR00902 282 GRWAIIGAIE-------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNA 335 (382)
T ss_pred HHHHHHHhHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHH
Confidence 9988887654 456788889999999999999999999987 7554 788888876
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
....+|..+++.++|++.+.+++ ..|++.+.+.++++++
T Consensus 336 ~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 336 LAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 56789999999999999988886 5666666655555433
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.4e-08 Score=97.37 Aligned_cols=347 Identities=13% Similarity=0.026 Sum_probs=187.5
Q ss_pred ccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccc-----hhHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 007582 43 KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLS-----RFATC-LIFGTLEVLALVMLTIQAYSKNLHPPDCGKS 116 (597)
Q Consensus 43 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~G-----r~~~i-~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 116 (597)
..+++.+..-.+..++.-.+.+. ..+..|+.+|+ .+ ||.-+ ..|.++++.|..+.+.+.-.-. . ....+
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~--~-~~~~~ 81 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA--E-SGQQS 81 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--c-ccccc
Confidence 34678888878888877666544 58889999999 46 55544 4455556666666554321110 0 00000
Q ss_pred CcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccch-
Q 007582 117 SCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSW- 195 (597)
Q Consensus 117 ~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w- 195 (597)
+-+.........+...+.|+|.+...+...++.+|..|+++ |.+..++.+.+..+|..++..+.+.+.+.++-
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 00001123345556678999999999999999999999777 99999999999999999999888876665552
Q ss_pred hHHHHHHH---HHHHHHHHHHHhhcc-ceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccC
Q 007582 196 WLGFLVSS---VANFIGLIALAAGKC-LYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIP 271 (597)
Q Consensus 196 ~~~f~i~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 271 (597)
|+.-.++. +...+.++ ..+..+ +.....+ .+
T Consensus 156 rL~~v~~~~a~i~~~l~~i-a~wg~E~r~~~~~~----------------------~~---------------------- 190 (403)
T PF03209_consen 156 RLIQVIQGVALIALLLNLI-ALWGQEPRRSRRAA----------------------AA---------------------- 190 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcccCCccccc----------------------CC----------------------
Confidence 32222222 22222221 222111 1110000 00
Q ss_pred CCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccC
Q 007582 272 HANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPT 351 (597)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 351 (597)
+.++.++.+. |+.+..+ .+.++++..+.+. ...+.+.-. ..-+|--+..+++.. .+
T Consensus 191 ~~~~~~f~~a-------------~~~~~~~--~~a~~f~~fl~l~--t~a~~~QD~-iLEPygg~Vfgmsv~------eT 246 (403)
T PF03209_consen 191 ERPRPPFREA-------------WRQVWAS--PQARRFFVFLFLG--TLAFFMQDV-ILEPYGGEVFGMSVG------ET 246 (403)
T ss_pred CCCCccHHHH-------------HHHHHhC--CChhHHHHHHHHH--HHHHHhhHH-HcCCchhHHcCCCHH------HH
Confidence 0000111110 1000000 0122332221111 111111000 000111111112111 11
Q ss_pred CcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHH
Q 007582 352 SSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWL 431 (597)
Q Consensus 352 ~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (597)
..++.....++++...+..++. .||. ++.+.-.+|...+.+++....+... ..+.+.+
T Consensus 247 T~Lta~~~~G~L~G~~~~g~~l---~~~~-------~~~~~a~~G~~~~~~~f~lii~a~~------------~~~~~~~ 304 (403)
T PF03209_consen 247 TRLTAFWGGGTLLGMLLAGFLL---SRRL-------GKKRTAALGCLLGALAFALIILAGP------------LGSPWLF 304 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---cCCC-------CchHHHHHHHHHHHHHHHHHHHHHh------------cccchHH
Confidence 1223333444444444444442 1221 2223344666666666655443310 1233556
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007582 432 SFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVT 491 (597)
Q Consensus 432 i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~ 491 (597)
....+++|++.+.......+...+..+.+..|..+|.|-..+.++..++..+.+.+.+..
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677789999999999999999999999999999999999999988888888888776654
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=123.73 Aligned_cols=164 Identities=10% Similarity=-0.037 Sum_probs=126.3
Q ss_pred HHHHHHHHHhHHhHHHHccccc---CCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 007582 25 ALENMGFIANGISMVLYFKNEM---HFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTI 101 (597)
Q Consensus 25 ~~~~~~~~~v~~~~~~yl~~~l---~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~ 101 (597)
++....+......++.|+.+.+ +.+..+.+.+.++..++..++.+++|++.|| +|||+.+.++.++..++.++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 233 IGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHh
Confidence 3333444444445666665443 4566677899998889899999999999999 89999999999988888887776
Q ss_pred HhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH-HHHHHHHHHH
Q 007582 102 QAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF-YLLATTVAAV 180 (597)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ 180 (597)
++ +.+.+++.+++.|++.+...+....++.|.+|++. |+...+. ++...++|..
T Consensus 312 ~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ 366 (420)
T PRK09528 312 AT-------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAV 366 (420)
T ss_pred cc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHH
Confidence 54 34567888999999988888888889999998655 6666554 5667889999
Q ss_pred HHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 181 IGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 181 ~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+++.+.|++.+..||+..|.+.+++.++..++.+
T Consensus 367 ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 367 FLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999998888999999887666554444433
|
|
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.4e-08 Score=107.61 Aligned_cols=368 Identities=14% Similarity=0.082 Sum_probs=209.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhH---HhHHHHcccccCCchh-hHHHHHHHH----HHHHHhHhhhhHHHhhhccchhHH
Q 007582 13 GFRACTFVFVFSALENMGFIANG---ISMVLYFKNEMHFDLA-GASNTLTNF----FGSTFLLCLVGGFISDTFLSRFAT 84 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~---~~~~~yl~~~l~~~~~-~~~~i~~~~----~~~~~~~~~~~G~l~D~~~Gr~~~ 84 (597)
+-.....+....++..++.+... .+...+....++.+.. ..+...... .+...+.+++-|.++|+ +|||..
T Consensus 16 ~~~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-~grk~~ 94 (463)
T KOG2816|consen 16 RLASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-YGRKVV 94 (463)
T ss_pred ccchhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-hhhhhh
Confidence 33445556667777777777666 5555565554443322 223333333 56778889999999999 799999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhcc--ccCcccchhhhcccCCCCCchhhh
Q 007582 85 CLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGC--GGNRGTLPAFGAGQFDENDPKGAK 162 (597)
Q Consensus 85 i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~--g~~~~~~~~~~~e~~~~~~~~~~~ 162 (597)
+.+..+..+++.+...+.. +++++ +.++.. +...+...++++|...+++
T Consensus 95 L~~~~~~~~l~~~~~~~~~---------------------~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~----- 145 (463)
T KOG2816|consen 95 LLLPLFGTILPALCLLFQG---------------------YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE----- 145 (463)
T ss_pred HHHHHHHHHHhHHHHHHHH---------------------HHHhh---hcccccchhhhhhhhhhheeeccchhH-----
Confidence 9999988888887777653 12333 444333 3456667888999998665
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHH
Q 007582 163 ALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIK 242 (597)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (597)
|...+++.......+..++|..++++.+..|...+|.+..+..++..+......|+-..++.+...
T Consensus 146 -R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~------------- 211 (463)
T KOG2816|consen 146 -RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA------------- 211 (463)
T ss_pred -HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc-------------
Confidence 889999988888899999999999998888999999999988877777666665543332221100
Q ss_pred hcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHh
Q 007582 243 NRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILM 322 (597)
Q Consensus 243 ~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 322 (597)
..+...|. .. .++... .+++..+ ..+..|..+..+.........
T Consensus 212 ~~~~~~~~---~~--------------------~~~~~~-----------~~~~~~~--~~~~~r~~l~l~l~~~~~~~~ 255 (463)
T KOG2816|consen 212 TLRELTPG---SL--------------------DSSHVA-----------DAFQSLT--KVGPDRLLLLLLLVAFLSSLP 255 (463)
T ss_pred cccccCCC---cc--------------------cchhhh-----------hhhhhhc--ccCCCccchHHHHHHHHHHHH
Confidence 00000000 00 000000 0000000 000111111111111111000
Q ss_pred Hhhhcc-cchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHH
Q 007582 323 NTCLAQ-LQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSA 401 (597)
Q Consensus 323 ~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~ 401 (597)
-..-.+ ....+...-.+.+.. .+.......+....+..+++.|+..+. ++.|. .+.+|.+.-.
T Consensus 256 ~~~~~~~~~~~yl~~~f~w~~~--~~s~~~~~~~~~~~i~~l~~~~~l~~~---l~~~~-----------~i~lGl~~~~ 319 (463)
T KOG2816|consen 256 EAGGASDVLLLYLKAKFGWNKK--EFSDLLSLVSILGIISQLLLLPLLSSI---LGEKR-----------LISLGLLSEF 319 (463)
T ss_pred HhcCceeEEEEEEeeecCcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhhh-----------HhhHHHHHHH
Confidence 000000 000000000011110 000001112222333333343333222 22222 3667888888
Q ss_pred HHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHH
Q 007582 402 VSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSS 481 (597)
Q Consensus 402 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~ 481 (597)
+..+..++.. . .|+...............|...+++..+.+.+.+|+..++......+.+.+++
T Consensus 320 ~~~~~~af~~---------------~-~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 320 LQLLLFAFAT---------------E-TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred HHHHHHHHhc---------------c-chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhH
Confidence 8888887752 1 24444445556667778888899999999999999999999999999999999
Q ss_pred HHHHHHhhhhc
Q 007582 482 AFVDIINAVTK 492 (597)
Q Consensus 482 ~~~~~i~~~~~ 492 (597)
.+...+...+.
T Consensus 384 ~~~~~i~~~t~ 394 (463)
T KOG2816|consen 384 ALYGNIFALTL 394 (463)
T ss_pred HHHHHHHHHHH
Confidence 98877766554
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-09 Score=108.93 Aligned_cols=177 Identities=16% Similarity=0.091 Sum_probs=145.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
++.++......++...+.|..++++.+++++..|++....+++...|.++..++.+++|+++|| +.|+++.....+..
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 4566778888999999999999999999999999999999999999999999999999999999 88888888877777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
+..+.+.+..+ +.+...+..++.|++.+........-.++..| +. ++...+++..
T Consensus 288 ~~~l~l~~~~~------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~sl~~a 342 (394)
T COG2814 288 LALLALTFTGA------------------SPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGSLNVA 342 (394)
T ss_pred HHHHHHHHhcc------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHHHHHH
Confidence 77776666542 34556666667777766665555555555333 22 7889999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhc
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
..|+|..+|.+++|.+.+++|+....++.+++.++++++.+...
T Consensus 343 a~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 343 AFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998889999999999988888877665544
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=116.93 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHH-H
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV-M 98 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~-l 98 (597)
.+...++....++++..+++.|+++.+|++..+.++....+.++..++.+++|+++|| +|||+.+.++.++..+... .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~ 321 (434)
T PRK15075 243 GMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPA 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHH
Confidence 3444555667788889999999998899999998888888889999999999999999 8999998876554433221 1
Q ss_pred HHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH-HH
Q 007582 99 LTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT-TV 177 (597)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~-~~ 177 (597)
....... .+.....+..++.+++.|...+...++..|.+|++. |++.+++.+... .+
T Consensus 322 ~~~~~~~----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~ 379 (434)
T PRK15075 322 LSWLVAA----------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAI 379 (434)
T ss_pred HHHHHcC----------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHH
Confidence 1111110 122234444556667777777777788999999777 888888865433 44
Q ss_pred HHHHHhhhheeeecccchh
Q 007582 178 AAVIGVTGIVYVFTEKSWW 196 (597)
Q Consensus 178 g~~~~~~~~~~~~~~~~w~ 196 (597)
++.++|.+.+++.+..++.
T Consensus 380 ~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 380 FGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HhhhHHHHHHHHHHhcCCc
Confidence 5777899888887776753
|
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=116.88 Aligned_cols=178 Identities=16% Similarity=0.142 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHH-HHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLT-NFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~-~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
.+.+....++.....+....+.++|+.+.+|++..+.+.+.. ...++..++.+++|+++|| +|||+.+.++.++..++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 344444456666666777778888988889999999999875 5567899999999999999 89999888777665555
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.++........ .+...+.+..++..++.|...+...++..+..+++. +++.+++.+...
T Consensus 303 ~l~~~~l~~~~---------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~ 361 (491)
T PRK11010 303 NAGYWLLSITD---------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALS 361 (491)
T ss_pred HHHHHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHH
Confidence 43332211100 123334445556555555555666788888888666 678888888888
Q ss_pred HHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 176 TVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
++|..+++.+.|++.+..||+..|.+..++.++++++....
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888899888899999988888777776655544
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.2e-08 Score=103.85 Aligned_cols=83 Identities=10% Similarity=-0.050 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc---------
Q 007582 122 AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE--------- 192 (597)
Q Consensus 122 ~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------- 192 (597)
+++..++++.++.|.|.+...++..+|++++.++++ +.+.+++.+....+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 467889999999999999999999999999998666 88999999999999999999998765421
Q ss_pred -------cchhHHHHHHHHHHHHHH
Q 007582 193 -------KSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 193 -------~~w~~~f~i~~~~~~~~~ 210 (597)
..|+++|++.+.+..+..
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~ 106 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLA 106 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 468889886555544333
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-09 Score=115.35 Aligned_cols=186 Identities=16% Similarity=0.062 Sum_probs=150.3
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh--HHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF--ATCL 86 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~--~~i~ 86 (597)
|..++.|.+..-++..++-+-+...+......|.++++|++..+...+..+..+.+.+++++.|++.|| +|-| ++++
T Consensus 275 k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~ 353 (477)
T PF11700_consen 275 KEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLL 353 (477)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHH
Confidence 333445677777788888889999999999999999999999999988889999999999999999999 8998 8888
Q ss_pred HHHHHHHHHHHHHHH--HhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh
Q 007582 87 IFGTLEVLALVMLTI--QAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL 164 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r 164 (597)
++.++..+-.+.-.+ ..+.. + .++.+.+++.-++.|+..|...+..-++.+|+.|+.+ .
T Consensus 354 ~~l~~~~~i~~~g~~G~~~~~~--g-----------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e 414 (477)
T PF11700_consen 354 ISLILWIIIPLYGLFGFWPSFF--G-----------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------E 414 (477)
T ss_pred HHHHHHHHHHHHHHHHhhhccc--C-----------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------h
Confidence 888776443333222 11100 0 2355667777789999999999999999999999766 7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHH
Q 007582 165 ASYFNFYLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~ 214 (597)
+.++++|.+..-..+.+||++.+.+.+..+ -|+.+....++.+++++++.
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998877665 78888777777777766554
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=116.72 Aligned_cols=164 Identities=15% Similarity=-0.040 Sum_probs=115.7
Q ss_pred hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 007582 37 SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKS 116 (597)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 116 (597)
+..+++.+.+|++..+.++....+.++..++.+++|+++|| +|||+.+.++.++..++.++..+........
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 376 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFVTG------- 376 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhcccCC-------
Confidence 33444556678888888888888999999999999999999 8999999999888888777666322111000
Q ss_pred CcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchh
Q 007582 117 SCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWW 196 (597)
Q Consensus 117 ~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~ 196 (597)
-++..+...+....++.+.......+....+..|.+|++. |++.+++.+...++|.++++.+.+++.++.+|+
T Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~ 449 (481)
T TIGR00879 377 -SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLESIGVG 449 (481)
T ss_pred -cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 0000022222333333332223345667788899999665 999999999999999999999988888778899
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007582 197 LGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~ 215 (597)
+.|++.+.+.+++.++.+.
T Consensus 450 ~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred ceehhHHHHHHHHHHHHhe
Confidence 8888877776666555444
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.4e-09 Score=109.73 Aligned_cols=169 Identities=10% Similarity=-0.034 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
.++......++.....+......+.|+.+.+|+++.+.+.......++..++.++.|+++|| +|||+.+.++.++..+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHH
Confidence 34444555555555556666667888888899999998888877778888999999999999 89999999998888888
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.++........ ..+..+++++.++.|+|.+...+......... ++++ |++..+.+++..
T Consensus 295 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~ 353 (406)
T PRK15402 295 LLLAALATVIS--------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHcc--------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHH
Confidence 87776653211 12455677888899999998877666655433 3344 899999999999
Q ss_pred HHHHHHHhhhheeeecccchhHHHHHHHHHH
Q 007582 176 TVAAVIGVTGIVYVFTEKSWWLGFLVSSVAN 206 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~ 206 (597)
.+|..+|+.+.+++.+..++....+...+..
T Consensus 354 ~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 354 MLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 9999999999998877767655444444333
|
|
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.1e-09 Score=113.64 Aligned_cols=168 Identities=15% Similarity=0.042 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 007582 22 VFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTI 101 (597)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~ 101 (597)
...++....+|++..+++.|+.+.+|++..+.+...++...+..++.++.|+++|| +|||+.+.++.++..+..+....
T Consensus 250 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~ 328 (432)
T PRK10406 250 GFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILS 328 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHH
Confidence 33444567888999999999999899998888888888777788888899999999 89999888776654433322211
Q ss_pred -HhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH-HH
Q 007582 102 -QAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV-AA 179 (597)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~-g~ 179 (597)
... ..+....+....+.+++.+...+...++.+|.+|++. |++.+++.+...++ ++
T Consensus 329 ~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 329 ALQN----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFG 386 (432)
T ss_pred HHHc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHH
Confidence 111 0011111221222223333444557788999999877 99999998765443 34
Q ss_pred HHHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 180 VIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 180 ~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
..+|.+.+.+.....|...+++.++..+++.+.
T Consensus 387 ~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 387 GSAEYVALSLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 457777665543323555555444444444433
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=99.04 E-value=2e-08 Score=106.83 Aligned_cols=162 Identities=17% Similarity=0.101 Sum_probs=116.7
Q ss_pred hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc--cc--hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 37 SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF--LS--RFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~--~G--r~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
.+..|+.+++|+++++.....+...+- ...-++.|.++|-+ +| ||+=++++.++..++.+.++..+...
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~------ 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE------ 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc------
Confidence 344688899999999877765554443 45567789999994 23 55555667766655555555543211
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 192 (597)
.+.....+..++..+|........-+.+.|....+. + .|+...++.+....+|++++..++|++.+.
T Consensus 84 ---------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p-~---~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 84 ---------SSAAIAVVLLFLASFGYAFADVAADALVVELARREP-E---SRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred ---------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC-c---hhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 134455666678899999999999999999987543 2 289999999999999999999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 193 KSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 193 ~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
.+++..|.+..++..+..+..+...+
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred CCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 88898888877665555444444333
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-09 Score=115.59 Aligned_cols=178 Identities=13% Similarity=0.034 Sum_probs=119.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.++......++.....|++..+++.|+++..|++..++++....+.++..++.+++|+++|| +|+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHH
Confidence 345556666667777778999999999999889999999999999999999999999999999 7654433333322222
Q ss_pred H---HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 95 A---LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 95 g---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
. .++..... ..+........++.|++.............|.+|++. |++..+++
T Consensus 330 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 386 (438)
T TIGR00712 330 VTIAVIVYWMNP-----------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 386 (438)
T ss_pred HHHHHHHHHhcC-----------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhh
Confidence 1 11111111 0122233344445555433222222345778888665 89999999
Q ss_pred HHHHHHH-HHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 172 LLATTVA-AVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 172 ~~~~~~g-~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
+...++| .+++|.+.|++.+..||...|.+.....+++.+..+..
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 46899999998888899999887766655555544443
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.1e-09 Score=112.21 Aligned_cols=173 Identities=13% Similarity=0.005 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhH-----HHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFA-----TCLIFGTL 91 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~-----~i~~~~~~ 91 (597)
+|.+.+..++.....+++..+++.|+.+.+|++..+++.+.+++.++..++.+++|+++|| +|||+ .... .+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~-~~~ 331 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWAL-WIV 331 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHH-HHH
Confidence 4445554455555566777888999998899999999999999999999999999999999 88762 2221 112
Q ss_pred HHHHHH-HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 92 EVLALV-MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 92 ~~ig~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
..++.+ +..+.. ..+.....+..++.+++.+...+...++..+..| +. |+...++
T Consensus 332 ~~l~~i~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~ 387 (476)
T PLN00028 332 QTLGGVFCIWLGR-----------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISGL 387 (476)
T ss_pred HHHHHHHHHHhcc-----------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhhh
Confidence 222221 111111 1123344455556666655555555566666644 22 8899999
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
.....++|+.+++.+.+ .....+|+..|.+.+++.+++.++.++.
T Consensus 388 ~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 388 TGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 88777888888877643 2233569999988877766666555443
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.8e-09 Score=110.25 Aligned_cols=165 Identities=8% Similarity=-0.126 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHccc-ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHH-HHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKN-EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATC-LIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i-~~~~~~~ 92 (597)
+.++......++....++++..+++.|+++ ..+++..+++.......++..++.+++|+++|| +|||+.. ....++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHH
Confidence 345667777788888899999999999977 356778888989999999999999999999999 8977753 3333333
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++ .... . +....+.+..+.++|.....+.......|.+|++. |+..+++.+
T Consensus 321 ~~~~~~-~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~ 375 (412)
T TIGR02332 321 AAGWLL-ASAT--D----------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVIN 375 (412)
T ss_pred HHHHHH-HHhc--C----------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHH
Confidence 333222 2111 1 11112222233344443333444455567777555 999999999
Q ss_pred HHHHHHHHHHhhhheeeeccc-chhHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEK-SWWLGFLVSSVA 205 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~-~w~~~f~i~~~~ 205 (597)
...++|.+++|.+.+.+.+.. +|+..|++..++
T Consensus 376 ~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 376 ATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999888766 499888766554
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.9e-08 Score=104.15 Aligned_cols=200 Identities=12% Similarity=0.141 Sum_probs=153.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+..++....+.-..+.+.+......+++.|+++..+.|++.+.+-++..+...+-.+.+-| .-|=|.+-+|.+++.+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHH
Confidence 556666666666666666888889999999999999999999999999999999999999999 6888899999999999
Q ss_pred HHHHHHHHhhccc-------------CCC-------------CCCCC--CCcC--C-ch--hHHHHHHHHHHHHhccccC
Q 007582 95 ALVMLTIQAYSKN-------------LHP-------------PDCGK--SSCL--K-GA--IAAYFYGSLYLYSFGCGGN 141 (597)
Q Consensus 95 g~~l~~~~~~~~~-------------~~~-------------~~~~~--~~~~--~-~~--~~~~~~~~r~l~g~g~g~~ 141 (597)
|+++.++-..+.. -.+ ..|.. +.|. + .+ -..+++++-++.|+|...+
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 9999887532110 000 11111 1121 1 11 2347889999999999999
Q ss_pred cccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec------------------cc-chhHHHHHH
Q 007582 142 RGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT------------------EK-SWWLGFLVS 202 (597)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------------------~~-~w~~~f~i~ 202 (597)
.+...+|+=|-...++ -...+++.+.+..+|.++|.+++++..+ +. .|+..|++.
T Consensus 255 ~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 9999999999987655 6789999999999999999998875431 01 389999999
Q ss_pred HHHHHHHHHHHHhhcccee
Q 007582 203 SVANFIGLIALAAGKCLYR 221 (597)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~ 221 (597)
..+.++..+.+++..+..+
T Consensus 329 g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHhCcccCc
Confidence 9988888877777655443
|
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.8e-09 Score=106.40 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=134.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.|..|.++...+...-++-++...++.|++++++.++.+++.....+.+...+..+++|+|+|| +|.+|++++..+..+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999 899999999998888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHH----HHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAY----FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++..+......-.. +..+... ++...+..|+|.|...- ++..++|.+ -|...+
T Consensus 296 ~~~~~l~~~~~~~~------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk----~Ip~if~~~-------~G~v~G 352 (417)
T COG2223 296 LAAALLSLFLTGFG------------HGGSFVVFVAVFLALFVFAGLGNGSVFK----MIPVIFPKE-------TGAVTG 352 (417)
T ss_pred HHHHHHHccccccc------------cCcchHHHHHHHHHHHHHhccCcchhee----echHHHHhh-------hhHHHH
Confidence 88887776541100 0112333 44444555555555544 444555421 578888
Q ss_pred HHHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHHh
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~~ 215 (597)
+.....++|++.-|...+...+..| +...|++...+.+++.++...
T Consensus 353 ~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 353 IVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777776666655555 788888877776666654433
|
|
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.9e-09 Score=110.52 Aligned_cols=154 Identities=12% Similarity=0.014 Sum_probs=125.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhH-HhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANG-ISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~-~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
|.++..+...++....+++.. ...+.|.++.+|.+..+.+.+...+.++..++.++.|++.|| +|||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHH
Confidence 445556666666667777666 666677776789999999999999999999999999999999 899999988877666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++..+..... . +.+.+++..++.|++.+...+...+++.|..|+++ |++.+++++.
T Consensus 289 ~~~~~~~~~~-----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 344 (365)
T TIGR00900 289 LAILVVGLTP-----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhhc-----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 6666555443 1 24567888899999999999999999999999655 9999999999
Q ss_pred HHHHHHHHHhhhheeeeccc
Q 007582 174 ATTVAAVIGVTGIVYVFTEK 193 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~ 193 (597)
..++|..+++.+++++.+.+
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999988776543
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.2e-08 Score=99.66 Aligned_cols=107 Identities=17% Similarity=0.043 Sum_probs=75.9
Q ss_pred hHHhHHHHcccccCC---ch----hhHHHHHHHHHHHHHhHhhhhHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 34 NGISMVLYFKNEMHF---DL----AGASNTLTNFFGSTFLLCLVGGFISDTFLS-RFATCLIFGTLEVLALVMLTIQAYS 105 (597)
Q Consensus 34 v~~~~~~yl~~~l~~---~~----~~~~~i~~~~~~~~~~~~~~~G~l~D~~~G-r~~~i~~~~~~~~ig~~l~~~~~~~ 105 (597)
+..+.++|+++..+- ++ +..+-..++..+...+..|+-|-++|. .| ||+.+-+..++..+.++++.++++
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 344677888765543 22 334666777778888888999999999 57 555666666666667777766642
Q ss_pred ccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCC
Q 007582 106 KNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND 157 (597)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~ 157 (597)
.......++...+..++.......-.+++.+..++++
T Consensus 112 ---------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 112 ---------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred ---------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 1245556666777888888888889999999998655
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-08 Score=107.29 Aligned_cols=167 Identities=10% Similarity=-0.022 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++..+...++....+++..++++.|++ +.|.+..+.+.+.+...++..+..++.|++.|| +|+|+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 45565666666666777777888888985 489998889999888888888899999999999 8999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH-H
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL-L 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~-~ 173 (597)
+.++.+.+. +.+++++..++.|++.+...+....+..+. ++++ +++..+.+. .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 336 (382)
T PRK11128 283 RWGLMGSTT-------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL 336 (382)
T ss_pred HHHHHHhhh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence 776665543 456778889999999998888888887776 3222 677788775 5
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
...+|..+||.++|++.+.+++. .|++.+++.++++
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 56788899999999998888863 5555555544443
|
|
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-08 Score=107.57 Aligned_cols=175 Identities=12% Similarity=0.006 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHH-HHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF-GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
..+..+...++...+.+...++.++|+.+ .|++..+.+++..... ....++.+++|++.|| +|+|+.+.++.++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 35556666677777777888888889876 7999999999888775 4666778999999999 8999999888776544
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCC-CCchhhhhhhhHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDE-NDPKGAKALASYFNFYLL 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~-~~~~~~~~r~~~~~~~~~ 173 (597)
..++......... ..+...+....++.+++.|...+...+...+..++ +. +++.++..+.
T Consensus 287 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 347 (390)
T TIGR02718 287 LALLWFAQAAFWL-------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHHccc-------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHH
Confidence 3333222111000 01223334444566677777777777777777664 33 8999999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
..++|..++|.++|++.+..|++..|.+...+.+++.+
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999888887766555543
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.9e-09 Score=111.84 Aligned_cols=155 Identities=10% Similarity=-0.012 Sum_probs=122.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+...+...++..+++.......+.|++..+|.+..+.+++...+.++..++.++.|++.|| +|||+++.++.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 455666667777777766666667778777789999999999888888888888999999999 8999999999888877
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++...... ..+...+.+..++.|++.+...+....+..+..|++. ++..+++++..
T Consensus 340 ~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 397 (471)
T PRK10504 340 VSLLFMLVAL----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMI 397 (471)
T ss_pred HHHHHHhccc----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHH
Confidence 7666654321 1123344556778889999888888999999998665 89999999999
Q ss_pred HHHHHHHHhhhheeeecc
Q 007582 175 TTVAAVIGVTGIVYVFTE 192 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~ 192 (597)
..+|..+|+.+++.+.+.
T Consensus 398 ~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999998887766443
|
|
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-08 Score=108.61 Aligned_cols=144 Identities=15% Similarity=-0.019 Sum_probs=105.7
Q ss_pred HHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 007582 30 GFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLH 109 (597)
Q Consensus 30 ~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~ 109 (597)
..+.+..+++.|+.+ .|.+..+.+.+.+.+.++..++.++.|++.|| +|||+.+..+.++..++.++......
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~----- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRIPQ----- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 344567778888876 58888888988899999999999999999999 89999999888776665544433221
Q ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheee
Q 007582 110 PPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (597)
.....+.+..+..+++..+..+..+.++.|.+|++. |++.+++.+...++|..++|.+.+++
T Consensus 319 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 319 ------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred ------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 111122222222333333445667788999999665 99999999999999999999999999
Q ss_pred ecccchhHH
Q 007582 190 FTEKSWWLG 198 (597)
Q Consensus 190 ~~~~~w~~~ 198 (597)
.+.+++...
T Consensus 381 ~~~~g~~~~ 389 (426)
T PRK12307 381 GITMGLGAA 389 (426)
T ss_pred HHcccHHHH
Confidence 887776543
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-08 Score=109.68 Aligned_cols=162 Identities=14% Similarity=0.038 Sum_probs=123.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
-|.++..+...++....++......+.|++..++ +..+.+++..+..++..++.++.++++|| +|||+++.++.++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMV 298 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 3556666777777777777666555556665666 55667778888889999999999999999 899999999998888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCch-hhhhhhhHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPK-GAKALASYFNFYL 172 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~-~~~~r~~~~~~~~ 172 (597)
++.++..+.. ++...+++..++.|++.+...+...++++|..+.++-+ .+..+|..+++++
T Consensus 299 ~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 360 (437)
T TIGR00792 299 LGYLIFFFAG------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRT 360 (437)
T ss_pred HHHHHHHHcc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHH
Confidence 8877665532 13455677778899999999999999999998743211 1223689999999
Q ss_pred HHHHHHHHHHhhhheeeecccch
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSW 195 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w 195 (597)
+...+|..+++.+.+++.+..||
T Consensus 361 ~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 361 FVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999988877654444
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=111.59 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHH------------HHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 21 FVFSALENMGFIANGISMVLYFKNEMHFDLAGASN------------TLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~------------i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
....++..+.+|++..+.+.+++ ..|++..+.+. ...+..++..++.++++++.|| +|||++++++
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHH
Confidence 33445556778888887777774 56765432211 1223445666788899999999 8999999998
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..++.++........ .+...+...-+...++..+..+....+.+|++|++. |++..
T Consensus 372 ~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~ 430 (502)
T TIGR00887 372 FFILTVLFFVLGFAYNHL---------------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAH 430 (502)
T ss_pred HHHHHHHHHHHHHHHHhc---------------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHH
Confidence 887777666555432100 011111111112223333345567788899999777 99999
Q ss_pred HHHHHHHHHHHHHHhhhheeeecc----------cchhHHHHHHHHHHHHHHH
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTE----------KSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~----------~~w~~~f~i~~~~~~~~~~ 211 (597)
++.+...++|+++++.+.+++.+. .++...|++.++..+++.+
T Consensus 431 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 431 GISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999988877652 3445566665555544443
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.8e-09 Score=108.46 Aligned_cols=172 Identities=12% Similarity=0.018 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHccccc---CCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEM---HFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l---~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~ 91 (597)
|.++..+...++....+.......+.|+.+.+ +.+....+.+.++..+...++.++.|++.|| +|||+.+.++.++
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l 293 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTI 293 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHH
Confidence 34444444455544455555556777777655 4455567888888888888899999999999 8999999999988
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH-
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF- 170 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~- 170 (597)
..++..+...+. +.+.+++.+++.|++.+........+..+..+++. ++...+.
T Consensus 294 ~~l~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~ 348 (396)
T TIGR00882 294 MSVRIIGSSFAT-------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIG 348 (396)
T ss_pred HHHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHH
Confidence 888777666543 34567788889999877666666666777776544 5565555
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
++....+|..+++.++|++.+..||+.+|.+.+++.++..++
T Consensus 349 ~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 349 FQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 567889999999999999998889999998877665554443
|
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.4e-08 Score=104.92 Aligned_cols=168 Identities=15% Similarity=0.046 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
.+......++.....+....++++|+.+.+|.+..+.+.+.+.+.++..++.++.|++.|| +|||+.+.++..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHH
Confidence 3444444445445556666777888888889999999999999999999999999999999 899999999988888777
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccC-CCCCchhhhhhhhHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQF-DENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~-~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
++...... +.....+..++.++|.+...+.......+.. +++. ++.. ..+...
T Consensus 280 ~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~ 333 (382)
T PRK10091 280 LMLFFFGG------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQIAF 333 (382)
T ss_pred HHHHHHHh------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHHHH
Confidence 65543321 2234455555666665554443333333333 3221 3333 235667
Q ss_pred HHHHHHHhhhheeeec-ccchhHHHHHHHHHHHHHHH
Q 007582 176 TVAAVIGVTGIVYVFT-EKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~-~~~w~~~f~i~~~~~~~~~~ 211 (597)
++|..+||.++|++.+ ..+|+..+.+.+.+..+...
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMS 370 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHH
Confidence 8999999999998876 46899888887666444443
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-10 Score=125.61 Aligned_cols=189 Identities=12% Similarity=0.134 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 007582 21 FVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLT 100 (597)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~ 100 (597)
++..+.. ...++........+++.|+++.++.|++.+.+-++..+..++..++++| .-|=|-+-+|.++..+|+++.+
T Consensus 9 ~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHh
Confidence 3344444 7778888888889999999999999999999999999999999999999 6777888899999999999988
Q ss_pred HHhhcccCCCCCC--CC------------CCc---------------C---C---chhHHHHHHHHHHHHhccccCcccc
Q 007582 101 IQAYSKNLHPPDC--GK------------SSC---------------L---K---GAIAAYFYGSLYLYSFGCGGNRGTL 145 (597)
Q Consensus 101 ~~~~~~~~~~~~~--~~------------~~~---------------~---~---~~~~~~~~~~r~l~g~g~g~~~~~~ 145 (597)
+-+... +.+ +. +-| . + ..-..+++++.++.|+|....++..
T Consensus 87 lPhf~~----~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 87 LPHFLS----GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred ccHhhc----CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 754321 111 00 113 0 1 1124788999999999999999999
Q ss_pred hhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc---------------------c-chhHHHHHHH
Q 007582 146 PAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE---------------------K-SWWLGFLVSS 203 (597)
Q Consensus 146 ~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------------~-~w~~~f~i~~ 203 (597)
.+|+=|-.++++ -....++++.+..+|.++|+++++...+. . .|++.|.+.+
T Consensus 163 ~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g 236 (539)
T PF03137_consen 163 ITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICG 236 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 999999998666 77889999999999999999888754310 1 3888888888
Q ss_pred HHHHHHHHHHHhhcccee
Q 007582 204 VANFIGLIALAAGKCLYR 221 (597)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~ 221 (597)
.+.++..+.++...++.+
T Consensus 237 ~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 237 ILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHcCCccCC
Confidence 777766666665554443
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.5e-09 Score=107.98 Aligned_cols=148 Identities=16% Similarity=0.097 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+..+.+....++....++.+..+++ ++.+++|.+..+.+.+.+.+.++..++.+++|++.|| +|||+.+....+..++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHH
Confidence 3344455556666677777777777 6677889999999999999999999999999999999 8998554444333333
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++..... +...+++..++.|++.+...+...++.+|.+|++. |++.+++++..
T Consensus 328 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~ 382 (398)
T TIGR00895 328 AVLVGSTLF-------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGI 382 (398)
T ss_pred HHHHHHHhh-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHH
Confidence 322222111 34456777889999999999999999999999655 99999999999
Q ss_pred HHHHHHHHhhhheee
Q 007582 175 TTVAAVIGVTGIVYV 189 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~ 189 (597)
..+|..++|.++|++
T Consensus 383 ~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 383 GRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhHHhc
Confidence 999999999988765
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-08 Score=102.93 Aligned_cols=162 Identities=9% Similarity=-0.057 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccc--cCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNE--MHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~--l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+..+......++-...--++..+++.|+.+. +|++..+.+...+.+.++..++.++++++.|| +|+||.+.++.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHH
Confidence 3455455555554445567888899999854 79999999999999999999999999999999 89999999888887
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
+++.++....+. . ....+.++.|++.+.+.|+..+...+..|++. +...++.
T Consensus 219 ~~~~~l~~~~~~-------------------~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~- 270 (310)
T TIGR01272 219 VLLSIGAALTHG-------------------Y-VAMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL- 270 (310)
T ss_pred HHHHHHHHHcCC-------------------H-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH-
Confidence 777655544321 1 12335568999999999999999988887432 2333343
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVA 205 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~ 205 (597)
....+|..+.|.+.|.+.+..|.+.+|+++.++
T Consensus 271 ~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 271 CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 456789999999999998888888888766554
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-08 Score=109.87 Aligned_cols=174 Identities=16% Similarity=0.047 Sum_probs=143.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.+..++...++..+....+...++.+..+.+|.+....|++.+++.+|+.++.++.+++.++ +++++.+..+.+++.+
T Consensus 218 ~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~ 296 (524)
T PF05977_consen 218 PPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFAL 296 (524)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHH
Confidence 334444455555555555667778888888999999999999999999999999999999999 8999999999988888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.+..+++. +.+...+..++.|++.....+...+.+-+..|++. |||.+++++..
T Consensus 297 ~~~~lal~~-------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~ 351 (524)
T PF05977_consen 297 ALLLLALSP-------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMV 351 (524)
T ss_pred HHHHHhcch-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHH
Confidence 877777765 45567778889999999888888888889999666 99999999999
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.+.+..+|.++.|++.+.+|-+..+.+.++..+++.++..
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988988888877766555554443
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.2e-09 Score=108.55 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH-H-H
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT-L-E 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~-~-~ 92 (597)
+.++.+....++.....+++..+++.|+.+.+|.+..+.+.+.+.+.++..++.+++|+++||..+||+....... . .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4556666677777777788888999999999999999999999999999999999999999983233333222211 1 1
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++..+..... ..+.....+..++.|+..+...+....+..|.+|++. |++..++++
T Consensus 296 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 352 (379)
T TIGR00881 296 IVSLLVYWLNP-----------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG 352 (379)
T ss_pred HHHHHHHhcCc-----------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence 11111111110 1133445556667777666666667788999999766 999999999
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGF 199 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f 199 (597)
...++|..++|.+.+++.+.+||+..|
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999888988653
|
|
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.4e-08 Score=102.67 Aligned_cols=164 Identities=11% Similarity=0.017 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
..+...+...+....+++...+.+.|+.+++|.++.+.+.+.....++..++.++.|++.|| +|||+.+.++.++..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHH
Confidence 34444445555556667777778888888999999999999999999999999999999999 89999999998888887
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.+++......+ ......+++..++.|+|.+...+....+..|..| ++ |++..++++...
T Consensus 286 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~ 344 (385)
T TIGR00710 286 AVLLEITAILG--------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLR 344 (385)
T ss_pred HHHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHH
Confidence 77666543111 1123455666778899999999999999888876 33 788888877555
Q ss_pred H-HHHHHHhhhheeeecccchhHHHHHH
Q 007582 176 T-VAAVIGVTGIVYVFTEKSWWLGFLVS 202 (597)
Q Consensus 176 ~-~g~~~~~~~~~~~~~~~~w~~~f~i~ 202 (597)
. +|+..++.++ .+.+..+|...+...
T Consensus 345 ~~~g~i~~~~~~-~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 345 LVLGAIVGYLVS-LIHGNTAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHHH-hccccChHHHHHHHH
Confidence 4 4666666554 555555555444443
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.1e-08 Score=105.69 Aligned_cols=154 Identities=7% Similarity=-0.069 Sum_probs=108.4
Q ss_pred HHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcC
Q 007582 40 LYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCL 119 (597)
Q Consensus 40 ~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~ 119 (597)
+++.+.+|.+.....+......++..++.+++|+++|| +|||+.++++.++..++.++++.....+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~------------- 360 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQ------------- 360 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcC-------------
Confidence 34445678877666766667778888999999999999 8999999999999999888776543111
Q ss_pred CchhHHHHHHHHHHHHhcccc-CcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh------eeeecc
Q 007582 120 KGAIAAYFYGSLYLYSFGCGG-NRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI------VYVFTE 192 (597)
Q Consensus 120 ~~~~~~~~~~~r~l~g~g~g~-~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ 192 (597)
... .....+.++.+++.+. ..|...++++|.+|++. |++.+++.+...++|..+++.+. +++.+.
T Consensus 361 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~ 432 (479)
T PRK10077 361 -APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH 432 (479)
T ss_pred -ccc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh
Confidence 011 1233334444444443 34778899999999666 99999999888888888775443 355567
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 007582 193 KSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 193 ~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
.+|+..|++..+..+++.++.+.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 433 FHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred ccCccHHHHHHHHHHHHHHHHHh
Confidence 78888888876665555554443
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.8e-08 Score=102.51 Aligned_cols=169 Identities=10% Similarity=0.026 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+.++..+...++.....++...+.++++.+++|++..+.+.+...+.++..++.++.|++.|| .+|+ .+.++..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~~-~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVKL-ALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh-HHHHHHHHHHH
Confidence 445555555566666677777777555566789999999999999999999999999999999 5554 44444444343
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
..+++.... .+.+.+.+..++.|++.+...+..+.++.+..|++ +++..+.++..
T Consensus 294 ~~~~l~~~~------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 348 (394)
T PRK10213 294 SALVLTLWG------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQVAV 348 (394)
T ss_pred HHHHHHHHh------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHHHH
Confidence 333333222 13456777888999999999999998888888732 44566666777
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
.++|..+|+.++|++.+..|++..+.....+.++..
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 789999999999999888888888877766544443
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.2e-08 Score=104.18 Aligned_cols=176 Identities=10% Similarity=-0.022 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHH--------HH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFAT--------CL 86 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~--------i~ 86 (597)
+.++......++....++....+++.|+.+.+|++..+.++..++..++..++.+++|+++|| +++|+. +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHH
Confidence 567788888889999999999999999999999999999999999999999999999999999 665421 11
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 87 IFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
.+......+..+...... . .+....++...+.+.+.+...+.......|..|. . ++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g~ 396 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYL-S---------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LGF 396 (465)
T ss_pred HHHHHHHHHHHHHHHHHc-C---------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HHH
Confidence 111111111111111110 0 1223334444555555555555555555566652 2 899
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecc---cchhHHHHHHHHHHHHHHHHHH
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTE---KSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~---~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
..++.+...++|..++|.+.+++.+. .+|+..|.+.+...+++.++..
T Consensus 397 ~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 397 IKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999988653 3488888887777666655443
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.8e-08 Score=109.76 Aligned_cols=153 Identities=10% Similarity=0.015 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+...+...++..+.+++...+++.|+++.+|+++.+++.....+.++..++.+++|++.|| +|||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 444556667777777888888899999999999999999999999999999999999999999 8999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.+++..... ..+.+...+..++.|+|.|...+.......+..|+++ ++...++++..
T Consensus 338 ~~~~l~~~~~----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 395 (495)
T PRK14995 338 SFYGLAMTDF----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMA 395 (495)
T ss_pred HHHHHHHhcC----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHH
Confidence 8776654321 1133445667889999999999888888888888665 89999999999
Q ss_pred HHHHHHHHhhhheeee
Q 007582 175 TTVAAVIGVTGIVYVF 190 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~ 190 (597)
.++|..+|+.+.+.+.
T Consensus 396 ~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 396 YELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988776553
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=110.82 Aligned_cols=155 Identities=14% Similarity=0.119 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++..+...++..+.+++...+++.|+++.+|++..+++.+.....++..++.+++|++.|| +|||+.+.++.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHH
Confidence 445556667777778888888899999999999999999999999999999999999999999 8999999999988888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+..+...... + ..+...++...++.|+|.|...+.......+..|+++ |++..++++..
T Consensus 334 ~~~~~~~~~~-~--------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 392 (485)
T TIGR00711 334 GFYWRAFTFT-P--------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFT 392 (485)
T ss_pred HHHHHhccCC-C--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHH
Confidence 8877663211 1 1234556667888999999888777777778888555 99999999999
Q ss_pred HHHHHHHHhhhheeeec
Q 007582 175 TTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~ 191 (597)
.++|..+|+.+.+.+.+
T Consensus 393 ~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 393 RQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888766544
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-08 Score=103.14 Aligned_cols=145 Identities=15% Similarity=0.125 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHH-HHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF-GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
..+...+..++..+.++++.+.++.|+.+ +|++..+.+.+.++.. ++..++.+++|++.|| +|||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHH
Confidence 36666667777788889999999999987 8999999998887765 5778999999999999 8999999999888777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+..+.....+..... + -...+.+.+....++.+++.+...+...++..|.+|++. |++.+++++..
T Consensus 288 ~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~ 353 (356)
T TIGR00901 288 TNAGFVWLASNGHHD-------G-ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHhcCccc-------c-cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHH
Confidence 666554432100000 0 000234567778889999999999999999999999887 99999998776
Q ss_pred HH
Q 007582 175 TT 176 (597)
Q Consensus 175 ~~ 176 (597)
.+
T Consensus 354 ~~ 355 (356)
T TIGR00901 354 SA 355 (356)
T ss_pred Hh
Confidence 54
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-08 Score=118.69 Aligned_cols=164 Identities=13% Similarity=-0.007 Sum_probs=129.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchh-hHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLA-GASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~-~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
+.++..+...++..+..+.+..+++.|+.+.+|++.. +.+++.+.+.++..++.+++|+++|| +++++.+.++.++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHH
Confidence 3444455555555566667778889999999999988 89999999999999999999999999 899999988888887
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++.++..... +.+.+++..++.|++.++..+...+++.+.+|++. |++.++++++
T Consensus 311 ~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~ 365 (1146)
T PRK08633 311 LSLFLLPTAP-------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNF 365 (1146)
T ss_pred HHHHHHHHhh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHH
Confidence 7777666553 34567777889999999999999999999999776 9999999999
Q ss_pred HHHHHHHHHhhhheeeec-ccchhHHHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFT-EKSWWLGFLVSSV 204 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~-~~~w~~~f~i~~~ 204 (597)
..++|.++++.+++.+.. .+++...|.+.+.
T Consensus 366 ~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999998887776655533 2345545554433
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=98.84 E-value=7e-08 Score=102.17 Aligned_cols=171 Identities=15% Similarity=0.150 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHH-HHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFF-GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
.+.++...++...+.+......++++.+++|++..+.+++..... .+..++.+++|++.|| +|||+.+.++.++..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 333444444444333333344556777788999999999886654 5678999999999999 89999988877776665
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHH----HHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSL----YLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r----~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
.+........+ .+.+.+++.- +..|++.+...+....++.+.+|.++ + +.+
T Consensus 290 ~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~ 344 (402)
T PRK11902 290 NLGYWVLAVTP---------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALL 344 (402)
T ss_pred HHHHHHHHhcC---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHH
Confidence 54432211111 1233344433 35566677777777777877776322 3 344
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHH
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
....++|..++..++|++.+.+||+..|.+.+.+.+++.++.
T Consensus 345 ~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 345 SALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 444466666556678888888999999998887776665544
|
|
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.1e-08 Score=106.53 Aligned_cols=157 Identities=11% Similarity=0.026 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++..+...++...+++......+.|+++.+|.+....++......++..++.++.+++.|| +|+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 556666677777777777777777778888888776655554444466778889999999999 8999999999998888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchh-hhhhhhHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKG-AKALASYFNFYLL 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~-~~~r~~~~~~~~~ 173 (597)
+.++..+.. ..+.+.+++..++.|+|.++..+...++.+|..+.++-+. +.++|..++.+.+
T Consensus 307 ~~~~~~~~~-----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 307 GYLLFFWVS-----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred HHHHHHHcC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 877766532 1245567777889999999999999999999987543221 1225888889999
Q ss_pred HHHHHHHHHhhhheee
Q 007582 174 ATTVAAVIGVTGIVYV 189 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~ 189 (597)
...+|..+++.+.+.+
T Consensus 370 ~~klg~aig~~i~g~~ 385 (448)
T PRK09848 370 TRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988876654
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=101.92 Aligned_cols=179 Identities=15% Similarity=0.118 Sum_probs=143.3
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
|.-+.+|++..-++..++-+=+..++.+....|-..++|++..+...+....++.+.++++++|+|.|| +|-|++++++
T Consensus 246 k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~ 324 (438)
T COG2270 246 KEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIG 324 (438)
T ss_pred HHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHH
Confidence 333445577777777777777888888899999999999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..+.++....... ..-+.+.-++.|...|..++.+-+|.++..|+++ -++++
T Consensus 325 lvi~~~~~~~~~~~~~-------------------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fF 379 (438)
T COG2270 325 LVILSIAALYLIFLEG-------------------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFF 379 (438)
T ss_pred HHHHHHHHHHHHHccc-------------------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------cccee
Confidence 9998887765554421 1234444468999999999999999999999776 78999
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHH
Q 007582 169 NFYLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~ 213 (597)
++|.+.....+.+||+..+.+.+..+ -|..+..-+++..+.++++
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 99999999999999998877765433 5666655555555554433
|
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.7e-08 Score=103.95 Aligned_cols=167 Identities=11% Similarity=0.017 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHc-ccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYF-KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl-~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
++......++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.|| +|||+++..+.++.+++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHH
Confidence 33444555666677777788888896 56789999999999999999999999999999999 89999999888777666
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.++..+.. +. ..+.+..+.|+|.+.+.|+..+...|.+|++. +...++... .
T Consensus 339 ~~~~~~~~-------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~~-~ 390 (438)
T PRK10133 339 CLISAFAG-------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIVM-T 390 (438)
T ss_pred HHHHHHcC-------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHhH-H
Confidence 55544432 11 22456678999999999999999999987432 233333322 3
Q ss_pred HHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHH
Q 007582 176 TVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~ 212 (597)
.+|..++|.+.+++.+..| -+..|+++.+..+...+.
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3577778788888877777 788888777665544443
|
|
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=102.60 Aligned_cols=153 Identities=11% Similarity=-0.004 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc-chhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL-SRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~-Gr~~~i~~~~~~~~ 93 (597)
+..+......++....++++..+++.|+++ .|.+..+.+.+.+.+.++..++.++.|+++|| + +||+++.++.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHH
Confidence 445555556666777888888999999875 69999999999999999999999999999999 7 57777788888888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
++.+++....+ +. .. ...++.|+|.|...+...+.+.+..++++ +++..+++.+.
T Consensus 275 ~~~~~~~~~~~------------------~~-~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~ 329 (355)
T TIGR00896 275 VGLCGLLFAPM------------------HG-LW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQS 329 (355)
T ss_pred HHHHHHHHhhh------------------hH-HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHH
Confidence 87766665431 11 11 13467899999999887777776554321 26788888888
Q ss_pred HHHHHHHHHhhhheeeecccc
Q 007582 174 ATTVAAVIGVTGIVYVFTEKS 194 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~ 194 (597)
..++|..++|.+.|++.+..+
T Consensus 330 ~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 330 IGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 888899999999988876554
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.5e-08 Score=91.59 Aligned_cols=167 Identities=14% Similarity=0.094 Sum_probs=133.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
......+|.+.++.++-..+.+=.++..+.++++.+|+|+..++.+.+...+.+.+.+++.|.+.|| +||+-..+.+..
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHH
Confidence 4466788988888888888888888888899999999999999999999999999999999999999 899987766665
Q ss_pred H-HHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 91 L-EVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 91 ~-~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
+ ..++...+.+..-. =+.+..+.|+...+......+.++-+.|+++ .|++++
T Consensus 339 ~~tl~~H~~l~Ft~ls---------------------Py~~m~~lGLsysllAcslWP~va~~vpE~q------LGTayg 391 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTFLS---------------------PYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYG 391 (459)
T ss_pred HHHHHHhhhHHhhhcc---------------------HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHH
Confidence 5 44455555554321 2566678888887777777888888888776 999999
Q ss_pred HHHHHHHHHHHHHhhhheeeecccc---hhHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKS---WWLGFLVSSVA 205 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~---w~~~f~i~~~~ 205 (597)
..|...|+|-.+.|++.+.+.+.-+ |-=.|++....
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 9999999999999999999976433 54455554443
|
|
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-06 Score=88.05 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=101.9
Q ss_pred cccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchh
Q 007582 44 NEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAI 123 (597)
Q Consensus 44 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (597)
+.+|++..|.+.+.....+.+.+..++.|.++|| +|||+..++.++++.+..++.- . .+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k~-~-------------------~~ 120 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTKH-S-------------------SN 120 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHh-c-------------------cc
Confidence 4689999999999999999999999999999999 8999999999988888775332 2 25
Q ss_pred HHHHHHHHHHHHhccccCcccchhhhcccCCCCC-chhhhhhhhHHHHHH-HHHHHHHHHHhhhheeeecccc--hhHHH
Q 007582 124 AAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND-PKGAKALASYFNFYL-LATTVAAVIGVTGIVYVFTEKS--WWLGF 199 (597)
Q Consensus 124 ~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~-~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--w~~~f 199 (597)
+..++++|++.|++......+..++......+++ |+ ...+..++... +...+-++++.+++-++.+..+ -..+|
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF 198 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPF 198 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchH
Confidence 6789999999999999999988876544332221 21 11233333222 1122223333334444444444 36788
Q ss_pred HHHHHHHHHHHHHHHh
Q 007582 200 LVSSVANFIGLIALAA 215 (597)
Q Consensus 200 ~i~~~~~~~~~~~~~~ 215 (597)
...+++..++.++...
T Consensus 199 ~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888877777665543
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4e-08 Score=118.11 Aligned_cols=184 Identities=13% Similarity=-0.110 Sum_probs=132.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.+.++..++..++..+.++++.++++.|+.+.+|.+..+.+++.+.+.++..++.++.|++.|+ .++++.+.++.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 224 DKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMG 302 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHH
Confidence 3556666666777777778888899999999999999999999999999999999999999998 677777666666655
Q ss_pred HHHHHHHHHhhcccCCCCCC-CCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDC-GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
++.+.+.+............ .-..--...+.+.++++.++.|++.|+..+...+++.+.+|++. ||+.++.++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~ 376 (1140)
T PRK06814 303 LFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANN 376 (1140)
T ss_pred HHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHH
Confidence 55544443200000000000 00000000244567788889999999999999999999999877 999999999
Q ss_pred HHHHHHHHHHhhhheeee-cccchhHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVF-TEKSWWLGFLVSSV 204 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~-~~~~w~~~f~i~~~ 204 (597)
...++|..+++++.+.+. ...+....|++.+.
T Consensus 377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 377 VLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999999998887775 34455655554443
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.6e-08 Score=102.62 Aligned_cols=174 Identities=13% Similarity=-0.040 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHccc--ccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKN--EMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~--~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
|.++......++..+.+.........|+.. +.+.+....+.+...+........++.|++.|| +|||+.+.++.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHH
Confidence 445555566666666655555566666643 344555566777777777767777888999999 79999999998888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++...+. ++.+.++++.++.|+|.+...|...+++.+..|++. |++.++...
T Consensus 285 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~~ 340 (395)
T PRK10054 285 VIGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQS 340 (395)
T ss_pred HHHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHHH
Confidence 88877666532 134456777889999999888988899999999765 788877654
Q ss_pred HHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...+|..+||.++|++.+..|....|.+......+..++.+
T Consensus 341 -~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 341 -LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 56689999999999998888877777665444444433333
|
|
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.3e-08 Score=101.95 Aligned_cols=155 Identities=12% Similarity=0.079 Sum_probs=110.6
Q ss_pred HHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 007582 32 IANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPP 111 (597)
Q Consensus 32 ~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~ 111 (597)
..+..+++.|+++..+ ++.+.+++.+...++...+....+++.||+++.++.+..+.++..++.++++.+.
T Consensus 225 ~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~-------- 295 (400)
T PRK11646 225 VQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS-------- 295 (400)
T ss_pred HHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--------
Confidence 3345567778776655 6677888877766665555444455555436777777888877877777666553
Q ss_pred CCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec
Q 007582 112 DCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (597)
+...+.+..++.++|.+...|...+++.|..|+++ |++.+++++...++|..+||.++|++.+
T Consensus 296 -----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 296 -----------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 33456666778889988899999999999999776 9999999999999999999999998866
Q ss_pred cc---c-hhHHHHHHHHHHHHHHHH
Q 007582 192 EK---S-WWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 192 ~~---~-w~~~f~i~~~~~~~~~~~ 212 (597)
.. + ....|.+..+..++..+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 359 LGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHhhcCCcchHHHHHHHHHHHHHHH
Confidence 42 2 245555544444444433
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.5e-08 Score=102.43 Aligned_cols=157 Identities=15% Similarity=0.087 Sum_probs=129.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
-|....++...++..++.....+..+.|.+..++.+ ...+.+..+..++..++.++.++++|| +|||+++.++.++.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAA 301 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHH
Confidence 366777888888888888877777777878778866 567788888999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchh-hhhhhhHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKG-AKALASYFNFYL 172 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~-~~~r~~~~~~~~ 172 (597)
++.++..+.. ..+.+.+++.-++.|+|.|...+...++++|+.+.++-|+ +.+.|..++.+.
T Consensus 302 ~~~~~~~~~~-----------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~ 364 (428)
T PF13347_consen 302 LGFLLLFFLG-----------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNS 364 (428)
T ss_pred HHHHHHHHHH-----------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhh
Confidence 9999887774 1366788999999999999999999999999998554221 223578888888
Q ss_pred HHHHHHHHHHhhhheee
Q 007582 173 LATTVAAVIGVTGIVYV 189 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~ 189 (597)
+...+|..+++.+.+.+
T Consensus 365 ~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 365 FFIKIGQGLAGAIVGLL 381 (428)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 88899999888876554
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.2e-08 Score=105.30 Aligned_cols=130 Identities=15% Similarity=-0.003 Sum_probs=96.3
Q ss_pred HHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhcc
Q 007582 59 NFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGC 138 (597)
Q Consensus 59 ~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~ 138 (597)
...+...++.++++++.|| +|||+.+.++.++..++.++...... .......+..++.+++.
T Consensus 363 ~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPV-----------------DLYFLRTALAVLGKFGI 424 (505)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCC-----------------CchHHHHHHHHHHHHHH
Confidence 4456667888899999999 89999999998888887776665432 11233445556667777
Q ss_pred ccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 139 GGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 139 g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
++..+...++.+|.+|++. |++.+++.+....+|.+++|.+.+ + ...++..++.+.+.+.+++.++.+
T Consensus 425 ~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH
Confidence 7777888999999999665 999999999999999999999887 4 334556676666655555544433
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.6e-07 Score=97.97 Aligned_cols=185 Identities=12% Similarity=-0.011 Sum_probs=118.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.+..|.++...++...+|.+...+++.|+++.+ +.........+..+...+..+++|+++|| +|++|+++++.++..
T Consensus 251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~ 327 (462)
T PRK15034 251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMA 327 (462)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHH
Confidence 345788888888887777788878999988765 33333333445577788899999999999 899999999998777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCC------C----C-----c
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDE------N----D-----P 158 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~------~----~-----~ 158 (597)
++........ |... ..+...+.++.+...++.|.-...+.-++.+++|+ + + .
T Consensus 328 i~~~~~~l~l--p~~~-----------~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 328 IFSALLFLTL--PGTG-----------SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHHHHh--cccc-----------ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 7765433332 1100 12455666665555555555555666666666653 0 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecc-cchhHHHHHHHHHHHHHHHHHH
Q 007582 159 KGAKALASYFNFYLLATTVAAVIGVTGIVYVFTE-KSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 159 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
+.+++-|...++......+|+++-|.+.+...+. .++...|++..+..+++.++..
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 0112345666777677777777777655544333 3477777777777666665543
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.4e-08 Score=101.11 Aligned_cols=144 Identities=19% Similarity=0.192 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCc-hhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFD-LAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~-~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
+|.++...++..+.++....+++.|+.+.+|.+ ..+.+.+.+...++..++.++.|++.|| +|+|+.+.+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHH
Confidence 344555666666677888899999999999999 7899999999999999999999999999 89988888888777777
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.+...+.... .+..+.+...++.|++.+...+....+..|..|+++ |++..++++...
T Consensus 287 ~~~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 344 (352)
T PF07690_consen 287 ALGLLLLPFS----------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIG 344 (352)
T ss_dssp HHHHCCSHHH----------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHh----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHH
Confidence 7666554321 145567778888999999999999999999998766 999999999999
Q ss_pred HHHHHHHh
Q 007582 176 TVAAVIGV 183 (597)
Q Consensus 176 ~~g~~~~~ 183 (597)
++|..+||
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.4e-05 Score=82.18 Aligned_cols=102 Identities=14% Similarity=0.072 Sum_probs=76.3
Q ss_pred HHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHh
Q 007582 57 LTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSF 136 (597)
Q Consensus 57 ~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~ 136 (597)
.++-.....+++++++.+-|+ +|.|+++.++...+..-.+-.-.. |...++.+-.+.|+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~--------------------N~y~~yfssallG~ 114 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP--------------------NSYYLYFSSALLGF 114 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc--------------------chHHHHHHHHHhhh
Confidence 455556666778889999999 899999999997665533222221 44578899999999
Q ss_pred ccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 007582 137 GCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185 (597)
Q Consensus 137 g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 185 (597)
|.+.....--.|.+|..+++. +.+..++.......+.++|...
T Consensus 115 Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 115 GAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHh
Confidence 999999999999999998655 6777777666666666666443
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.8e-07 Score=93.88 Aligned_cols=158 Identities=6% Similarity=-0.135 Sum_probs=112.8
Q ss_pred HHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007582 28 NMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKN 107 (597)
Q Consensus 28 ~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~ 107 (597)
......+...++.|+.+.+|.++.+.|.+.+.+.++..++.++.+++.|| .++++.+..+.. ..+..++.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHH-HHHHHHHHHHHh----
Confidence 34444555566678888899999999999999999999999999999999 799988887753 333333333222
Q ss_pred CCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe
Q 007582 108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIV 187 (597)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 187 (597)
+.+...+..++.|++.|...+...+.+.+..|++ ..+++..+..++..++|..++..+.+
T Consensus 292 ---------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~-----~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 292 ---------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVL-----VGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred ---------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCccc-----ccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 3445667777899999998888888877764432 12689999999999999999988777
Q ss_pred eeecccchhHHHHHHHHHHHHHHHH
Q 007582 188 YVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 188 ~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
.+ ...+-+..+.+.....+++..+
T Consensus 352 ~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 352 LL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 55 3455555555544443344333
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.6e-07 Score=98.13 Aligned_cols=160 Identities=12% Similarity=-0.007 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++.++...++.....+...+..+.|++..++ +....+.+.+...++..++.++.++++|| +|||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 667777777787877777666666555554444 45566667776778888999999999999 8999999999887777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCC-chhhhhhhhHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND-PKGAKALASYFNFYLL 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~-~~~~~~r~~~~~~~~~ 173 (597)
+.+........+ ..+.+.+++.-++.|++.+...+..+++++|..+.++ +..+.+.|..++...+
T Consensus 309 ~~~~~~~~~~~~--------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~ 374 (473)
T PRK10429 309 SCGVLLLMGLAA--------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM 374 (473)
T ss_pred HHHHHHHHhccC--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence 766654321111 1245566777788999999999999999999977432 1112224567888888
Q ss_pred HHHHHHHHHhhhheeee
Q 007582 174 ATTVAAVIGVTGIVYVF 190 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~ 190 (597)
...+|..+++.+.|++.
T Consensus 375 ~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 375 VVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88899888888776554
|
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.4e-07 Score=96.73 Aligned_cols=159 Identities=11% Similarity=0.077 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHc-ccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYF-KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl-~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
|.++.++...++...+...... +..|. +..++ +....+.+.....+...++.++.++++|| +|||+.+.++.++..
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~ 305 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFV 305 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHH
Confidence 4455555555555444433333 44444 43443 33344455566677788889999999999 899999998887666
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchh-hhhhhhHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKG-AKALASYFNFYL 172 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~-~~~r~~~~~~~~ 172 (597)
++.+...+.. .++...+++..++.|+|.++..+...++++|..+.++-+. +.+.|..++.+.
T Consensus 306 ~~~~~~~~~~-----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~ 368 (444)
T PRK09669 306 ILSALIFFIP-----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNL 368 (444)
T ss_pred HHHHHHHHhC-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHH
Confidence 5444333321 2245667778889999999999999999999987433221 222466788888
Q ss_pred HHHHHHHHHHhhhheeeeccc
Q 007582 173 LATTVAAVIGVTGIVYVFTEK 193 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~ 193 (597)
+...+|..+|+.+++++.+..
T Consensus 369 ~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 369 FAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 888999999988876654433
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.5e-06 Score=90.90 Aligned_cols=148 Identities=6% Similarity=-0.085 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
.+..+...++.....+....+.+.++.+.+|.++.+.+.+.+...++..++.+++|++.|| +|||+++.++.++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHH
Confidence 3444444555555566666677778888889999999999999999999999999999999 899999998887755543
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH-H
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA-T 175 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~-~ 175 (597)
+........+ .+.+.+.++..+.+.+.+...+....++.|..| +. +++..+.+... .
T Consensus 275 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 332 (377)
T PRK11102 275 IWLVVSALLD---------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHHh---------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHH
Confidence 3332221101 123344445555555566666666667777765 33 67777776533 4
Q ss_pred HHHHHHHhhhhe
Q 007582 176 TVAAVIGVTGIV 187 (597)
Q Consensus 176 ~~g~~~~~~~~~ 187 (597)
.+|..+++.+++
T Consensus 333 ~~g~~~g~~~~~ 344 (377)
T PRK11102 333 GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHh
Confidence 567777776654
|
|
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-06 Score=90.39 Aligned_cols=146 Identities=6% Similarity=-0.090 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 24 SALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 24 ~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
..+....++....+.+.|++ ++|++..+.+.....+..+..++.++++++.|| +|||+.+....++..++.+.+....
T Consensus 212 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (401)
T PRK11043 212 FAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLAS 289 (401)
T ss_pred HHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666667777765 479999999988888888888999999999999 8999987777666555544333222
Q ss_pred hcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh
Q 007582 104 YSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGV 183 (597)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 183 (597)
... ..+...++++..+.|++.+...+.......|..|+ + +++..+++......++..++
T Consensus 290 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~~~~~ 348 (401)
T PRK11043 290 LLS--------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLCFLAS 348 (401)
T ss_pred Hhc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHHHHHH
Confidence 111 11234455566778899999888888887777763 3 88999998877777777777
Q ss_pred hhheeeecc
Q 007582 184 TGIVYVFTE 192 (597)
Q Consensus 184 ~~~~~~~~~ 192 (597)
.+.+.+.+.
T Consensus 349 ~~~g~l~~~ 357 (401)
T PRK11043 349 LLVSALIST 357 (401)
T ss_pred HHHHHccCC
Confidence 777766553
|
|
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-06 Score=88.94 Aligned_cols=138 Identities=10% Similarity=0.100 Sum_probs=93.9
Q ss_pred CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHH
Q 007582 351 TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430 (597)
Q Consensus 351 ~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (597)
-+...+.+-.+-+++-++..+++.++|+-.. +..|+.+.++=++....+ .++|.
T Consensus 408 fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v-----------~~lgLa~~~~Rf~~~S~L---------------~n~W~ 461 (618)
T KOG3762|consen 408 FGVVSALCHAGEILFYFFSFKLIEKIGHVNV-----------MYLGLACNVGRFLYYSYL---------------QNPWM 461 (618)
T ss_pred eeehhhhhccchHHHHHHHHHHHHHhcccce-----------eeehhhHHHHHHHHHHHh---------------cCchh
Confidence 3455566666777777777788766665543 335555555555544444 35577
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCC
Q 007582 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL-SLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINK 509 (597)
Q Consensus 431 ~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~-~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~ 509 (597)
+++.-++.++....++.+..+|+...+|+++|+.++++... ..++|--+|+.+++.+....
T Consensus 462 vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f------------------ 523 (618)
T KOG3762|consen 462 VLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF------------------ 523 (618)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee------------------
Confidence 88888999999999999999999999999999999999754 55666666766666543211
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHh
Q 007582 510 NNVNLFYWFLAIVSVLNLVLYLYA 533 (597)
Q Consensus 510 ~~~~~~f~~~~~~~~~~~v~~~~~ 533 (597)
+...+|..+++.|++.++.+...
T Consensus 524 -g~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 524 -GARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHh
Confidence 11234677776666666554443
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=98.58 E-value=9.8e-07 Score=92.10 Aligned_cols=166 Identities=8% Similarity=-0.046 Sum_probs=109.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh---HHHHH-HH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF---ATCLI-FG 89 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~---~~i~~-~~ 89 (597)
.|.+|.+....++....+|++..+++.|+++ .|++.. .+....+...... +..++++|| ..|| +.... ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~-~~r~~~r~~~~~~~~ 264 (368)
T TIGR00903 191 RKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDR-VARAGLRSIYIRAAA 264 (368)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHH-hhhhhhHHHHHHHHH
Confidence 3667888889999999999999999999965 577754 4554444444333 445888888 5543 33222 23
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++..++..+.+... +....++...+.+++.....+...++.+|.+|++. |++..+
T Consensus 265 ~~~a~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G 319 (368)
T TIGR00903 265 LLIAAFFLALAFEL-------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAG 319 (368)
T ss_pred HHHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccc
Confidence 22222222222221 12233444556777777777888899999999777 999999
Q ss_pred HHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHH
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~ 212 (597)
+.+...++|+.++|.+.+.+.. +-+..|.+-++..+++.+.
T Consensus 320 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 320 AIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888765553 5555555555444444433
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.4e-07 Score=88.92 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=109.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccc--cCC----chhhH-------------HHHHHHHHHHHHhHhhhhH
Q 007582 12 GGFRACTFVFVFSALENMGFIANGISMVLYFKNE--MHF----DLAGA-------------SNTLTNFFGSTFLLCLVGG 72 (597)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~--l~~----~~~~~-------------~~i~~~~~~~~~~~~~~~G 72 (597)
..+|..+.+..+-|.++++|||++-......+.- .+. .+++. --=..+-.+.-+-|.++.+
T Consensus 323 ~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~ 402 (528)
T KOG0253|consen 323 KLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITG 402 (528)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHH
Confidence 3457777888999999999999887665443321 110 01111 1112234566778899999
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhccc
Q 007582 73 FISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQ 152 (597)
Q Consensus 73 ~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~ 152 (597)
++-|| +|||+++..+.+++.+..+++..+.+-. .-..++..+|+++ .+...+.+.|..|+
T Consensus 403 ~iver-lGRKkTMal~l~~f~iflfll~~c~~rn---------------~~tvllf~arafi----sg~fqvaYvYtPEV 462 (528)
T KOG0253|consen 403 VIVER-LGRKKTMALSLILFGIFLFLLTTCKTRN---------------AYTVLLFTARAFI----SGAFQVAYVYTPEV 462 (528)
T ss_pred HHHHH-hcchhHHHHHHHHHHHHHHHHHHhcCcc---------------hhHHHHHHHHHHH----hchheEEEEecCcc
Confidence 99999 8999999999999999888777664211 1235667777766 44556788999999
Q ss_pred CCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 007582 153 FDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 153 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
+|+.. |+...+...-+..+|+++.|++.
T Consensus 463 yPTav------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 463 YPTAV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cchhh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 99776 99999999999999999999988
|
|
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=75.83 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHH
Q 007582 357 IPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYC 436 (597)
Q Consensus 357 ~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 436 (597)
...+..++..++..++.|+++||+. +..+..+..++.+..... .+.+.+....+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~-----------~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 59 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPV-----------LLVGLFIFVLSTAMFALS---------------SNITVLIIARF 59 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHH-----------HHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHH
Confidence 3455666677777777776676653 445555555554444332 23345556677
Q ss_pred HHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHH
Q 007582 437 IFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFY 516 (597)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f 516 (597)
+.+++.....+....++.|.+|++.|++++++.+....++..+++.+.+.+.+. .+| ++.|
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~-----------~~~~ 120 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF--------LGW-----------RAPF 120 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc--------cch-----------HHHH
Confidence 888888888899999999999999999999999999999999998888776421 122 3456
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 007582 517 WFLAIVSVLNLVLYLYAAAW 536 (597)
Q Consensus 517 ~~~~~~~~~~~v~~~~~~~~ 536 (597)
++.++++++..+..+++.||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 121 LFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHHHHHHHhhcCCC
Confidence 77777777776666655543
|
|
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.9e-06 Score=91.24 Aligned_cols=192 Identities=17% Similarity=0.043 Sum_probs=129.5
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHH
Q 007582 9 KQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIF 88 (597)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~ 88 (597)
+.+..++.....+...++..+.--....+-...+-.+-|++..++.+++........+..+++.++-|| +|||+.++.+
T Consensus 263 ~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~ 341 (485)
T KOG0569|consen 263 KNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLIS 341 (485)
T ss_pred cCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHH
Confidence 345667777777777777777655555555555566778999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHH-HHHHHHHHHHhcccc-CcccchhhhcccCCCCCchhhhhhhh
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAA-YFYGSLYLYSFGCGG-NRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~l~g~g~g~-~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
..+..+..+++.......+.. ..-.. ..+++.++..++.+. .-|...-+.+|++|+.. |..
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~-----------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~a 404 (485)
T KOG0569|consen 342 LSLMAVALLLMSIALFLSNSF-----------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSA 404 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHH
Confidence 999998888777654332100 00011 223444443333332 56778889999999777 888
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccc
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCL 219 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 219 (597)
++++-+....+..++-...-..+.+.+|- +.|++-++...+..+..+...|+
T Consensus 405 a~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 405 AQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 88887777666666555544455555553 45555445444455555544443
|
|
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.3e-07 Score=93.27 Aligned_cols=140 Identities=14% Similarity=0.059 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
..+.+....++.....+++..+++.|+++.+|++..+++.+.+.+.+...++.+++|+++|| +|||+.+..+..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHH
Confidence 34555555666666777888899999999999999999999999999999999999999999 89999888888777776
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
..+..+.... ..+...+.+..++.+++.|...+...++++|..|. + +++..++.+...
T Consensus 305 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~ 362 (366)
T TIGR00886 305 AFLVVLGLVS---------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A------TGAVSGLVGAIG 362 (366)
T ss_pred HHHHHhcCCC---------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h------cccHHHHHHHhc
Confidence 6665543210 01344455555666666777777777788888762 3 889999887766
Q ss_pred HHH
Q 007582 176 TVA 178 (597)
Q Consensus 176 ~~g 178 (597)
++|
T Consensus 363 ~~g 365 (366)
T TIGR00886 363 NLG 365 (366)
T ss_pred cCC
Confidence 665
|
|
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.1e-07 Score=95.53 Aligned_cols=176 Identities=14% Similarity=0.151 Sum_probs=144.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccc--hhHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLS--RFATCLIFGTLE 92 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~G--r~~~i~~~~~~~ 92 (597)
+.++.......+..++++.-..+++.|.. ..+++..+++.++++......++.++.|+++|+ .. ++.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHH
Confidence 56777788888888888888888888877 789999999999999999999999999999999 56 344444455555
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.+.++.+. +++.+...-++.|++.|......+..+.|+...++ ....+++..
T Consensus 376 gl~~~~~p~~~-------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l 430 (509)
T KOG2504|consen 376 GLARLFLPFAT-------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHH
Confidence 55555555554 45678888889999999999999999999998766 889999999
Q ss_pred HHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHHhhc
Q 007582 173 LATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALAAGK 217 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~~~~ 217 (597)
+...++..+||.+.+++.+..+ |...|..+....+++..+++...
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999887766 88899888888777776555443
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.1e-06 Score=89.22 Aligned_cols=74 Identities=11% Similarity=0.048 Sum_probs=61.1
Q ss_pred HHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 29 MGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 29 ~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
...+......+.|+.+++|++..+.+.+.+...++..++.++.|++.|| +|||+.+.++.++..++.++.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444555667778889999999999999999999999999999999 8999999999998888887777654
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.4e-06 Score=82.76 Aligned_cols=170 Identities=13% Similarity=0.062 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
+..|.+...--+.++.+|.++.+++.++.+ -|+|..++|+.++...+......++.-++++|.-.+|+......+.+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 446777778888999999999999999875 4999999999999999999999999999999856788888888888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
|.+-+.+.+. +...+- .+++|+|.|+..+....++.+-+.+.+ +-++..++-|-.
T Consensus 287 G~~G~~~~P~------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgmaQg~ 341 (395)
T COG2807 287 GLVGLLLAPG------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMAQGV 341 (395)
T ss_pred HHHHHHHhhh------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHhhhh
Confidence 8887777642 222222 489999999999999999999876422 256777777766
Q ss_pred HHHHHHHHhhhheeeecc-cchhHHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTE-KSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~-~~w~~~f~i~~~~~~~~~ 210 (597)
..+=+.+||++.|++.+. .+|+.++..-+...++..
T Consensus 342 GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred hHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 677778899999998764 468877655554443333
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.3e-06 Score=85.27 Aligned_cols=154 Identities=13% Similarity=0.009 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.....+...++...++.-..+.+.-|.+..++.+.............+..++.++..++++| +|||+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHH
Confidence 555666667777777777666667777788888888888788888888888889999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh-hhHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL-ASYFNFYLL 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r-~~~~~~~~~ 173 (597)
+.++..+.+ .++..++++..++.++|.+...+...++++|...-.+=++-++| |-.++.+.+
T Consensus 315 ~~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF 377 (467)
T COG2211 315 GYLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTF 377 (467)
T ss_pred HHHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHH
Confidence 999988875 23678899999999999999999999999999874432222222 445555555
Q ss_pred HHHHHHHHHhhhh
Q 007582 174 ATTVAAVIGVTGI 186 (597)
Q Consensus 174 ~~~~g~~~~~~~~ 186 (597)
..=+|.+++..+.
T Consensus 378 ~~K~g~ala~~~~ 390 (467)
T COG2211 378 FRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 5555655555443
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.7e-06 Score=88.94 Aligned_cols=177 Identities=16% Similarity=0.160 Sum_probs=121.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh-----HHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF-----ATCLIFG 89 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~-----~~i~~~~ 89 (597)
+.+|.++...+++..+++.+..++|.|+.+.+|++..+.|+..++-.+...+..+++|.++|| +-+| ...-+..
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999 4441 1112222
Q ss_pred HH--HHHHHHHHHHHhhcccCCCCCCCCCCcCCc-hhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhh
Q 007582 90 TL--EVLALVMLTIQAYSKNLHPPDCGKSSCLKG-AIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALAS 166 (597)
Q Consensus 90 ~~--~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~ 166 (597)
.+ ...+..+..++. .+ |++. .....+.++..+.|+..++..-+ ..|.+|.+ -+.
T Consensus 337 ~i~~~~~ai~l~~l~~-~~-----------~~~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~apq~-------a~~ 393 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAF-TS-----------DEHRLLAVILLTIAIGLSGFNISGFYKN----HQDIAPQH-------AGF 393 (466)
T ss_pred hHHHHHHHHHHHeeee-cC-----------CCcchHHHHHHHHHHHHcccchhhhHhh----hhhccchH-------HHH
Confidence 22 222222222221 11 0011 12223333333333333333322 23334422 578
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeecc---cchhHHHHHHHHHHHHHHHHHHh
Q 007582 167 YFNFYLLATTVAAVIGVTGIVYVFTE---KSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 167 ~~~~~~~~~~~g~~~~~~~~~~~~~~---~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
++++.+...++..+++|.+.+.+..+ -.|+.+|++.+++.+++.+++.+
T Consensus 394 l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 394 VMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 99999999999999999999988743 37999999999888777755443
|
|
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.7e-06 Score=89.16 Aligned_cols=165 Identities=8% Similarity=-0.083 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccc-cCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNE-MHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~-l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
..+..+...++-.....++.++++.|+.+. .+.+...++...+.+..+..++.+++|+++|| +++|+.+.++.++.++
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH
Confidence 344455566666566667888899998653 24444555666777778889999999999999 8999999888887777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
..++...... . ......++.|++.+.+.|+..+...+..+++. + ...+...+
T Consensus 312 ~~ll~~~~~~-------------------~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~-~~s~~l~~- 363 (410)
T TIGR00885 312 LCLGSIFAGG-------------------H-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------K-YGAAGLVM- 363 (410)
T ss_pred HHHHHHHcCC-------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------h-hhHHHHHH-
Confidence 7766665431 1 23556667888888888999999999987433 1 22222222
Q ss_pred HHHHHHHHhhhheeeeccc------chhHHHHHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEK------SWWLGFLVSSVANFIG 209 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~------~w~~~f~i~~~~~~~~ 209 (597)
..+|..+.|.+.|++.+.. +.+..|.++.++.+..
T Consensus 364 ~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 364 AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 3499999999999988743 4778888877664433
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.4e-05 Score=84.32 Aligned_cols=140 Identities=9% Similarity=-0.075 Sum_probs=98.3
Q ss_pred hHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 007582 34 NGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC 113 (597)
Q Consensus 34 v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~ 113 (597)
.....+.|+++.+|++..+.+++......+..++.++.+++.|| +||+... +.....++.++........
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~------- 295 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMWQ--SVICCLLAGLLMWIPGWFG------- 295 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHhc-------
Confidence 34455667777799999999988888888888889999999999 6743322 2222223322222111000
Q ss_pred CCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeccc
Q 007582 114 GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEK 193 (597)
Q Consensus 114 ~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 193 (597)
..+.+.+.++.++.|+|.+...|...++..|.+|+ + ++...++.+...++|..+++.+++++....
T Consensus 296 -------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 296 -------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred -------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 11345567778899999999999999999998873 3 788888888888999999999888876554
Q ss_pred chhH
Q 007582 194 SWWL 197 (597)
Q Consensus 194 ~w~~ 197 (597)
.+..
T Consensus 362 ~~~~ 365 (394)
T PRK11652 362 QFSL 365 (394)
T ss_pred hHHH
Confidence 4443
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=98.36 E-value=4e-06 Score=90.66 Aligned_cols=185 Identities=7% Similarity=-0.075 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchh----hHHHHHHHHHHHHHhHhhhhH----HHhhhccchhHHH--
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLA----GASNTLTNFFGSTFLLCLVGG----FISDTFLSRFATC-- 85 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~----~~~~i~~~~~~~~~~~~~~~G----~l~D~~~Gr~~~i-- 85 (597)
.+..++....+....+....+.++.|..+..+.+.. ..+++.++-.+...+..++-. ++.||..+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 344445555555666666777778777665443321 145666666666666655544 4455422233333
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhh
Q 007582 86 LIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALA 165 (597)
Q Consensus 86 ~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~ 165 (597)
.+|.++..++.+..+++.....- +...+.+++++..++.++|.....|...++.+++.|++. |+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~----------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g 416 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADA----------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MG 416 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC----------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HH
Confidence 67888888887777654211100 002467889999999999999999999999999999766 99
Q ss_pred hHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhh
Q 007582 166 SYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 216 (597)
+++++++....+|..+++.+........+|...|....+..++..++++..
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998887665555577777777666655555554443
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00013 Score=75.52 Aligned_cols=151 Identities=11% Similarity=0.067 Sum_probs=100.9
Q ss_pred HHhHHHHcccc-cCCchhhHH-HHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 007582 35 GISMVLYFKNE-MHFDLAGAS-NTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPD 112 (597)
Q Consensus 35 ~~~~~~yl~~~-l~~~~~~~~-~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~ 112 (597)
-+++.+|+.++ .|++..|.. -+.-...-......++...++|. +|.|++++++.+..++..+++....
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 35778899886 898888764 55555555666677788999999 8999999999998888888877765
Q ss_pred CCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec-
Q 007582 113 CGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT- 191 (597)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 191 (597)
+...+-++-+..|++.+. -.+|-+.++..-+|+ +..+..+....+.-+|..++.+++-.+..
T Consensus 93 ----------sv~~mq~~q~~yg~~~a~----evay~sYiys~v~~~---~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 93 ----------SVLAMQLMQFFYGLATAA----EVAYYSYIYSVVDKE---HYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred ----------cHHHHHHHHHHHHHHHHH----HHHHHHHheeecCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344667777777666544 444445555433322 25667777767777777777666544332
Q ss_pred -ccchhHHHHHHHHHHHHHHHH
Q 007582 192 -EKSWWLGFLVSSVANFIGLIA 212 (597)
Q Consensus 192 -~~~w~~~f~i~~~~~~~~~~~ 212 (597)
..++.....+......+++++
T Consensus 156 ~~~sy~~L~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 156 GGVSYFQLNYISLASVSLALLI 177 (412)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 345566666666655555544
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-05 Score=83.97 Aligned_cols=177 Identities=11% Similarity=0.001 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
+...+...++...+.-....+...|+++.-+.+....+.+.++-.+.=.+.-.+.+++-.| +|-|++++++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 4444455566666666677888899887655777777777777777777888899999999 899999999999888877
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH-H
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA-T 175 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~-~ 175 (597)
.+.+.....+ .......+.+-.+.|+..|....+...|+.+.+|++. |++..+++... .
T Consensus 288 ~l~a~~~~~~--------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~ 347 (400)
T PF03825_consen 288 LLYAYFSDPW--------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSF 347 (400)
T ss_pred HHHHHhcCCc--------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHh
Confidence 7777662110 0012233445567999999999999999999999877 88999998754 5
Q ss_pred HHHHHHHhhhheeeecccc------hhHHHHHHHHHHHHHHHHHH
Q 007582 176 TVAAVIGVTGIVYVFTEKS------WWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~------w~~~f~i~~~~~~~~~~~~~ 214 (597)
.+|..+|..++|++.+.++ |...+.+++...++..+++.
T Consensus 348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999877655 44455555555444444433
|
|
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.3e-05 Score=84.38 Aligned_cols=156 Identities=10% Similarity=0.019 Sum_probs=94.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|....++...++.........+....|.+..++. ....+.+...+.+++.++.+++++++|| +|||+++..+..+..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAV 305 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHH
Confidence 4444455455555555444444444444444543 3445567778888889999999999999 8999988766655444
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhh-hhHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKAL-ASYFNFYLL 173 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r-~~~~~~~~~ 173 (597)
..++..+.+ ..+...+++.-++.|++.++..+...++++|..+.++-+..++| +..++...+
T Consensus 306 ~~~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f 368 (460)
T PRK11462 306 ISLAMFFVP-----------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF 368 (460)
T ss_pred HHHHHHHhc-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence 333333222 11222344555677888888777778888888774332222223 344566666
Q ss_pred HHHHHHHHHhhhheee
Q 007582 174 ATTVAAVIGVTGIVYV 189 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~ 189 (597)
...+|..+++.+++++
T Consensus 369 ~~Klg~alg~~i~g~i 384 (460)
T PRK11462 369 VLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777776655443
|
|
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-06 Score=88.45 Aligned_cols=152 Identities=13% Similarity=0.199 Sum_probs=118.5
Q ss_pred CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHH
Q 007582 351 TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430 (597)
Q Consensus 351 ~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (597)
.+.++....+..+++.|+...+.|+.=|++. +.+|.++-.++++..++.. ..|.
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-----------~~vG~~iW~~Av~~~~fs~---------------~Fwq 123 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRV-----------IAVGIFIWTLAVFASGFSN---------------HFWQ 123 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceE-----------EeeHHHHHHHHHHHHHHHH---------------HHHH
Confidence 4556666777888899999999666655554 6788888888888777652 4455
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCc
Q 007582 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKN 510 (597)
Q Consensus 431 ~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~ 510 (597)
+++.-.+.|+||....|...+++.+.+|...|++..++++++..+|+.+|..+...+...+.. |.
T Consensus 124 ~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-------Wr-------- 188 (493)
T KOG1330|consen 124 VLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-------WR-------- 188 (493)
T ss_pred HHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-------eE--------
Confidence 667778999999999999999999999999999999999999999999988877776543321 54
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCC
Q 007582 511 NVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSD 546 (597)
Q Consensus 511 ~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~ 546 (597)
+.|.+-+++.++++++..++.+|-.++..|+.+
T Consensus 189 ---~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 189 ---WAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred ---EEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 348889999999988888887766554444433
|
|
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-05 Score=79.42 Aligned_cols=140 Identities=18% Similarity=0.153 Sum_probs=106.2
Q ss_pred ccccCCch--hhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCC
Q 007582 43 KNEMHFDL--AGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLK 120 (597)
Q Consensus 43 ~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (597)
..+++.+. ...+++.+.+..+..++.++.|+++|| +|||+.+..+.....++.++..+..+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~---------------- 91 (338)
T COG0477 29 LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPN---------------- 91 (338)
T ss_pred HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCcc----------------
Confidence 33444444 478899999999999999999999999 69998888888776666666665542
Q ss_pred chhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH-HHHHHHHHHhhhheeeec--ccchhH
Q 007582 121 GAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL-ATTVAAVIGVTGIVYVFT--EKSWWL 197 (597)
Q Consensus 121 ~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~--~~~w~~ 197 (597)
.....+++.|+++|++.|...+...++++|..|+ . ..|+...+.... ...+|..+++.+++.+.. ..+|+.
T Consensus 92 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 92 -VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred -chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 1467889999999999999999999999999985 1 237888888777 577788888766554433 357888
Q ss_pred HHHHHHHH
Q 007582 198 GFLVSSVA 205 (597)
Q Consensus 198 ~f~i~~~~ 205 (597)
.|.+....
T Consensus 166 ~~~~~~~~ 173 (338)
T COG0477 166 AFLLAALL 173 (338)
T ss_pred HHHHHHHH
Confidence 65555444
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.3e-05 Score=81.19 Aligned_cols=168 Identities=13% Similarity=0.028 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++......++....+++.....+.++++.+|.+..+.++......++..++..+.+.+.++ .++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHH
Confidence 445555556666667777777788889999999999999998877788888877777776644 2444554444445555
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
|.++........ .++....+++.++.++|.+...|+.....-. +.+.+ +|+..+.+...
T Consensus 297 g~~l~~~~~~~~--------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~--~~~~~-----~G~a~a~~~~~ 355 (413)
T PRK15403 297 GLALLIVGNLLW--------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF--SNNLP-----KGTVSASLNMV 355 (413)
T ss_pred HHHHHHHHHHHc--------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHhc--cCCCC-----CcHHHHHHHHH
Confidence 555444331100 1123345778888999999988888753322 21111 56777777766
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHH
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVA 205 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~ 205 (597)
...+..+++..++++... +-+.+|.....+
T Consensus 356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 667777777777776543 445565554443
|
|
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.3e-05 Score=79.10 Aligned_cols=148 Identities=17% Similarity=0.175 Sum_probs=121.9
Q ss_pred ccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchH
Q 007582 349 VPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISL 428 (597)
Q Consensus 349 ~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (597)
...+.+.....+..++..|+++.+++++|+|.+ +.+|++++..+.+++++.+ ++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip-----------m~~Gl~vmf~sTilFafg~---------------sy 159 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP-----------MVAGLFVMFLSTILFAFGN---------------SY 159 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccH-----------HHHHHHHHHHHHHHHHHcc---------------hh
Confidence 344555566778888888999888888888876 8899999999999998863 55
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhhhccCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCC
Q 007582 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGM-KTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDI 507 (597)
Q Consensus 429 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~ 507 (597)
+.++++-.+.|++.........+.+.+.+|++. |+.++|+......+|..+++.+++++++..++ ..
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk--------~a---- 227 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK--------SA---- 227 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC--------cC----
Confidence 678888999999999999999999999999776 69999999999999999999999998765432 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 007582 508 NKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKP 541 (597)
Q Consensus 508 ~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~ 541 (597)
-|+++++++++..++-+++.+-++..+
T Consensus 228 -------PFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 228 -------PFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -------cHHHHHHHHHHHHHHHHheeCccccCc
Confidence 299999999999888777765544433
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.8e-05 Score=83.69 Aligned_cols=148 Identities=16% Similarity=-0.042 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHhHHhHHHHccc----c-----cCCchhhHHHHHHHHHHHHHhHhhhh----HHHhhhccchhHHHHHH
Q 007582 22 VFSALENMGFIANGISMVLYFKN----E-----MHFDLAGASNTLTNFFGSTFLLCLVG----GFISDTFLSRFATCLIF 88 (597)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~yl~~----~-----l~~~~~~~~~i~~~~~~~~~~~~~~~----G~l~D~~~Gr~~~i~~~ 88 (597)
+..++....+|.+...++.++.. . .|.. ...+++.++-.+...++.++. +++.|| ++..+.+.+|
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G 356 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIG 356 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHH
Confidence 33445556677777766666542 1 1111 113444555554555555555 666777 6777889999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
.++..+|.++.+.+...+.- +. .-+.+++++..++.|+|.+...|+..+++.+..|++. |++.+
T Consensus 357 ~~l~~l~f~~l~~~~~~~~~---------~~-~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~ 420 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFAND---------AG-IVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIM 420 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCC---------CC-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHH
Confidence 99999999888777543210 00 1235578999999999999999999999999999666 99999
Q ss_pred HHHHHHHHHHHHHHhhhhe
Q 007582 169 NFYLLATTVAAVIGVTGIV 187 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~ 187 (597)
+.++++..+|+.++..+.+
T Consensus 421 g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888888877766553
|
|
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00013 Score=74.72 Aligned_cols=173 Identities=16% Similarity=0.173 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVML 99 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~ 99 (597)
.....++..+++++--..+=+|-.+.||++..+...+++.+..+..++..+.|++..|..+++++..+|+.+..++..+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 34444555566676666777888889999999999999999999999999999998855899999999999999988887
Q ss_pred HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 007582 100 TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAA 179 (597)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (597)
.++... .+.+.+..+.++.|+|.|......-+..-|+..+++ -|..++.+.....+..
T Consensus 293 i~a~~~----------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~ 350 (403)
T PF03209_consen 293 ILAGPL----------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIAR 350 (403)
T ss_pred HHHHhc----------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHH
Confidence 777532 256789999999999999999999999999998665 6788888888777777
Q ss_pred HHHhhhheeee----------cccchhHHHHHHHHHHHHHHHHHH
Q 007582 180 VIGVTGIVYVF----------TEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 180 ~~~~~~~~~~~----------~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
.++...++.+. ...+|..+|.+.+..+++++.+..
T Consensus 351 Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 351 GLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 77766665432 224577788888877777766544
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.4e-05 Score=78.70 Aligned_cols=175 Identities=10% Similarity=0.021 Sum_probs=133.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccC---CchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMH---FDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~---~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
-|.+|...+........|+..-.-.+.|.+..++ .++...|.+.+.-...-++...+..++-+| +|-|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHH
Confidence 4667766666666656666665556777765554 334456788888888888889999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+.++=.+++++++ +.+.+.+.+.+.|+-.+.....+.-|+++.+|++- ..+.+.+
T Consensus 298 i~~iRi~~~~~~~-------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v 352 (412)
T PF01306_consen 298 IMAIRIIGSGFAT-------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLV 352 (412)
T ss_dssp HHHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHH
T ss_pred HHHHHHHHHhhhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHH
Confidence 9998888888876 56789999999999999999999999999999543 5566666
Q ss_pred H-HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 171 Y-LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 171 ~-~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
. +.+..+|..+.+.++|++.++.|.+..|++-+.+.+...++..
T Consensus 353 ~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 353 GFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhe
Confidence 3 5777888888888999999999999888776655444444433
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00022 Score=77.74 Aligned_cols=138 Identities=15% Similarity=0.215 Sum_probs=93.8
Q ss_pred CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHH
Q 007582 351 TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFW 430 (597)
Q Consensus 351 ~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (597)
..++...+.+...+..|++.++.|.+|||.. +..|.++..+++++.+-. .+...
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-----------~i~g~~l~vvG~Iv~atA---------------~~~~~ 133 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-----------FIIGSLLGVVGSIVCATA---------------QNMNT 133 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----------HHHHHHHHHhHHHHhhcC---------------CcHHH
Confidence 3456666778888888999999999999986 567777778877776643 34445
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCc
Q 007582 431 LSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKN 510 (597)
Q Consensus 431 ~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~ 510 (597)
++....+.+++.+.... ....+.|..|.+.|..+.++.....-.....++.+...+. .+.+|+
T Consensus 134 ~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~--------~~~~WR-------- 196 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA--------AHSGWR-------- 196 (599)
T ss_pred HHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc--------cCCCcc--------
Confidence 66677777887655544 4556889999999998887776554444445555554432 123566
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q 007582 511 NVNLFYWFLAIVSVLNLVLYLYAA 534 (597)
Q Consensus 511 ~~~~~f~~~~~~~~~~~v~~~~~~ 534 (597)
|.|++.+++..++++..++++
T Consensus 197 ---w~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 197 ---WIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHh
Confidence 456777777777766555544
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.6e-05 Score=60.21 Aligned_cols=71 Identities=14% Similarity=0.034 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
+-...++...+...+.++++.|+++ .|+|..+.|.+.++..+...+++++.|+++|| +||++.++....+.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHHH
Confidence 3344555666666788888889885 89999999999999999999999999999999 89999888776543
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.8e-05 Score=72.12 Aligned_cols=128 Identities=10% Similarity=0.006 Sum_probs=97.6
Q ss_pred HhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 007582 36 ISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK 115 (597)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 115 (597)
+.-.+.+++.+|+|.+|.+.+-..-.+|..++ ++.|.+.|+ +|.+.++++|.+...+|..++.++..-..-
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~------- 92 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVSGRIP------- 92 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCccC-------
Confidence 34456788999999999999999999998875 888999999 899999999999999999988776431100
Q ss_pred CCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 007582 116 SSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184 (597)
Q Consensus 116 ~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 184 (597)
....+.+.+..++.|.|.+...+..-....+.||. + ||...++.--...+++.+=..
T Consensus 93 -----~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~ 149 (250)
T PF06813_consen 93 -----SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQ 149 (250)
T ss_pred -----ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHH
Confidence 12455666666777788777777777777788984 4 888888876666665554333
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=6e-05 Score=81.76 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=77.2
Q ss_pred HHHHHHHHhhhhhHHH-hhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHH
Q 007582 360 LFMSILLPLYEFFFVP-FARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIF 438 (597)
Q Consensus 360 i~~i~~~~l~~~~~~~-~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 438 (597)
....+..++..++.|+ +|||+. +.+|.++.+++.+..++.. .....+....++.
T Consensus 61 ~~~~~~~~~~G~laDr~~G~r~~-----------~~~g~~~~~~g~~~~~~~~--------------~~~~ll~~~~~l~ 115 (489)
T PRK10207 61 ALVYGLISIGGYVGDHLLGTKRT-----------IVLGAIVLAIGYFMTGMSL--------------LKPDLIFIALGTI 115 (489)
T ss_pred HHHHHHHhhHHHhhhhccchHHH-----------HHHHHHHHHHHHHHHHHhc--------------cchhHHHHHHHHH
Confidence 3344445567777776 688765 6678888888777666431 1111233456677
Q ss_pred HHHHHHHhhhHHHhhhhccCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007582 439 GIADMFTFIGLLEFFYKEAPAG--MKTLASSFTYLSLSFGYFLSSAFVDIINA 489 (597)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~P~~--~r~~~~~~~~~~~~l~~~i~~~~~~~i~~ 489 (597)
+++.+...|....++.+++|++ .|+.+.+++....++|.++++.+++.+.+
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999987 45778999999999999999999988754
|
|
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00014 Score=78.15 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=70.1
Q ss_pred hHHHHHHHHhhhhhHHHh-hhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHH
Q 007582 359 LLFMSILLPLYEFFFVPF-ARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCI 437 (597)
Q Consensus 359 ~i~~i~~~~l~~~~~~~~-~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 437 (597)
.....+..++..++.|++ |||+. +.+|.++++++.++.+... .+...+.....+
T Consensus 55 ~~~~~l~~ligG~LaDRilGrrr~-----------iliG~il~~lg~lll~~~~--------------~~~~~~~l~l~l 109 (493)
T PRK15462 55 CSLVYVTPILGGFLADKVLGNRMA-----------VMLGALLMAIGHVVLGASE--------------IHPSFLYLSLAI 109 (493)
T ss_pred HHHHHHHHHHHHHHHHHccCcHHH-----------HHHHHHHHHHHHHHHHHhh--------------cchhHHHHHHHH
Confidence 344445555677777776 77664 5677777777765443210 011112223334
Q ss_pred HHHHHHHHhhhHHHhhhhccCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 438 FGIADMFTFIGLLEFFYKEAPAG--MKTLASSFTYLSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~P~~--~r~~~~~~~~~~~~l~~~i~~~~~~~i~ 488 (597)
..++.+...+...+++.|.+|++ .|+.+.++.+...++|+.+++.+.+.+.
T Consensus 110 i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 110 IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666677788899999976 7999999999888899999999988764
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=97.88 E-value=2.4e-05 Score=84.45 Aligned_cols=136 Identities=9% Similarity=-0.151 Sum_probs=107.5
Q ss_pred ccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCch
Q 007582 43 KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGA 122 (597)
Q Consensus 43 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (597)
.+.+|+++.+.|.+.....++..++..+.+++.+| ++.|+++.++.++..++.+...+..+-.... .| ..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~---~g------i~ 349 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLA---FG------IS 349 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccc---cC------CC
Confidence 45789999999999999999999999999999999 8999999999999988876653221101000 00 01
Q ss_pred hHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccc
Q 007582 123 IAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKS 194 (597)
Q Consensus 123 ~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (597)
+...+...-++.+++.|........++.+..|++. +++.++++....++|..+++.+++++.+..|
T Consensus 350 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 350 DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 12345556678889999999999999999999777 8999999999999999999998888876655
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.048 Score=58.35 Aligned_cols=162 Identities=13% Similarity=0.024 Sum_probs=96.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCC-----chhhHHHHHHHHHHHHHhH-hhhhHHHhhhccchhHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHF-----DLAGASNTLTNFFGSTFLL-CLVGGFISDTFLSRFATCL 86 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~-----~~~~~~~i~~~~~~~~~~~-~~~~G~l~D~~~Gr~~~i~ 86 (597)
-.|.++....+-||-.++|+.+.+ +.|.+.. +.....++.+...+.+.+. .++.+++++| ++|++.+.
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHH
Confidence 345666677777777777775443 3555544 3345667766655544444 7889999999 89999988
Q ss_pred HHHHHHHHHHHHHHHHhh--cccCCCCCCCCCCcCC-----ch---------hHHHHHHHHHHHHhccccCc-ccchhhh
Q 007582 87 IFGTLEVLALVMLTIQAY--SKNLHPPDCGKSSCLK-----GA---------IAAYFYGSLYLYSFGCGGNR-GTLPAFG 149 (597)
Q Consensus 87 ~~~~~~~ig~~l~~~~~~--~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~r~l~g~g~g~~~-~~~~~~~ 149 (597)
+....+.+-.++.++.-. -..+++ + .-|++ +. +.|...+--+...+-...+. -....+.
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p-~---~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHP-T---ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCC-c---HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766665555544311 000000 0 00000 00 01111111122222222233 3677899
Q ss_pred cccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeee
Q 007582 150 AGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVF 190 (597)
Q Consensus 150 ~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 190 (597)
.|++..++ -.|+++++..+.|+|..+++.+..++.
T Consensus 155 ndi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998555 679999999999999999998876654
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0002 Score=68.39 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=69.4
Q ss_pred HcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCC
Q 007582 41 YFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLK 120 (597)
Q Consensus 41 yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (597)
|+-+.+++...+.+.+.-.-...+.++..+.|-|+|| .||||.-. .+++..+++++.-..|
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracv----tycitYiLsCiTKhSp-------------- 122 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACV----TYCITYILSCITKHSP-------------- 122 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hcccccee----eehHHHHHHHHhhcCC--------------
Confidence 5556678888888877777777788888889999999 89999755 4556666666654322
Q ss_pred chhHHHHHHHHHHHHhccccCcccchh-hhcccCC
Q 007582 121 GAIAAYFYGSLYLYSFGCGGNRGTLPA-FGAGQFD 154 (597)
Q Consensus 121 ~~~~~~~~~~r~l~g~g~g~~~~~~~~-~~~e~~~ 154 (597)
++-.+++||++-|+.......+..+ +++|.-.
T Consensus 123 --qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 123 --QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred --ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 4568999999999999887776655 4566543
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00037 Score=74.66 Aligned_cols=205 Identities=10% Similarity=-0.085 Sum_probs=138.6
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHccc-ccCCchh-----h-----HHHHHHHHHHHHHhHhhhhHHHhhhc
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKN-EMHFDLA-----G-----ASNTLTNFFGSTFLLCLVGGFISDTF 78 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~-~l~~~~~-----~-----~~~i~~~~~~~~~~~~~~~G~l~D~~ 78 (597)
.++.||.++.++..+++..++++....+...|..+ .++-++. + ..+....+.+.+.+.+++--++.++
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~- 331 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG- 331 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 37789999999999999999999999999998875 3443221 1 1244445566666777777888999
Q ss_pred cc-hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC-CCc-CCchhHHHHHHHHHHHHhccccCcccchhhhcccCCC
Q 007582 79 LS-RFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGK-SSC-LKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDE 155 (597)
Q Consensus 79 ~G-r~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~ 155 (597)
+| ||++..++.++..++.+...+..++++-..+.-|. -.- +.....+..++...+.|+..+.....-.+++++..++
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 88 46777888888888777766544321000000000 000 0011235666777789999999999999999999985
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccc--hhHHHHHHHHHHHHHHHHHHhhccc
Q 007582 156 NDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKS--WWLGFLVSSVANFIGLIALAAGKCL 219 (597)
Q Consensus 156 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--w~~~f~i~~~~~~~~~~~~~~~~~~ 219 (597)
+. .+.|..+++++.++.+.-.+..+..|.+.+..+ -...+.+.++..+++.+..+...|+
T Consensus 412 ~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 412 LG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 43 126999999999988888877766555433222 4567777888877777776665553
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=97.76 E-value=2.8e-07 Score=99.10 Aligned_cols=185 Identities=13% Similarity=-0.025 Sum_probs=110.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
++.....+...++..+..+....+..+++.+..+.+.. -.......+...++.+++.++.|| +|||++++++..+..
T Consensus 251 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~ 327 (451)
T PF00083_consen 251 RKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMA 327 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-ccccccccccccccc
Confidence 34566666666666565555555555566666666655 222233445566777788899999 899999999998888
Q ss_pred HHHHHHH-HHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccc-cCcccchhhhcccCCCCCchhhhhhhhHHHHH
Q 007582 94 LALVMLT-IQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCG-GNRGTLPAFGAGQFDENDPKGAKALASYFNFY 171 (597)
Q Consensus 94 ig~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g-~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~ 171 (597)
+..+.++ ......+. ++..+.. .++.-.+..++.+ +..+....+.+|.+|++. |.+..++.
T Consensus 328 ~~~~~~~~~~~~~~~~----------~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~ 390 (451)
T PF00083_consen 328 ICSLILGIIFFLGVSS----------SSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLS 390 (451)
T ss_pred cccccccccccccccc----------ccccccc-cceeeeeccccccccccccccccccccccccc------cccccccc
Confidence 7776664 11100100 0000111 1222222222222 445666688999999887 99999999
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
+....+++++++.+..++.+..+-...+.+...+.++..+......|
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred cccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 88888999888888777766555233444444444444444444333
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0096 Score=61.81 Aligned_cols=156 Identities=13% Similarity=0.089 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHcccccC------C-----------------chhhHHHHHHHHHHHHHhHhhhhHHHhh
Q 007582 20 VFVFSALENMGFIANGISMVLYFKNEMH------F-----------------DLAGASNTLTNFFGSTFLLCLVGGFISD 76 (597)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~yl~~~l~------~-----------------~~~~~~~i~~~~~~~~~~~~~~~G~l~D 76 (597)
-.+.-+|+++.|..+.+-+.+-+.++.+ . +....+.+..+-.+-+.+.-+++-++-+
T Consensus 5 fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~ 84 (402)
T PF02487_consen 5 FWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFIH 84 (402)
T ss_pred HHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhhh
Confidence 3456788999988888877777762211 0 1111244555566677777788888889
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCC
Q 007582 77 TFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEN 156 (597)
Q Consensus 77 ~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~ 156 (597)
| +..+.=+.++.++.++|.++.+++. +.++-++|-++.+++.|.-....-.+.+ .+++
T Consensus 85 ~-v~y~~Ri~~~~~l~~~g~l~va~~~-------------------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~- 142 (402)
T PF02487_consen 85 R-VPYWIRILICVALSAAGMLLVAFSP-------------------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK- 142 (402)
T ss_pred h-ccchHHHHHHHHHHHHHHhheeecc-------------------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc-
Confidence 8 6755556666677888888887764 4456789999999999999998888755 4441
Q ss_pred CchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec-ccchhHHHHHHHHHH
Q 007582 157 DPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT-EKSWWLGFLVSSVAN 206 (597)
Q Consensus 157 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~w~~~f~i~~~~~ 206 (597)
...+.+..+...++.+|...-..+.. ..+-|..+++..++-
T Consensus 143 ---------~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 143 ---------SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLP 184 (402)
T ss_pred ---------cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 22344444455555555443222222 233455555544443
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=8.4e-05 Score=77.92 Aligned_cols=166 Identities=6% Similarity=-0.087 Sum_probs=125.7
Q ss_pred HHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 26 LENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYS 105 (597)
Q Consensus 26 ~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~ 105 (597)
+..++.--+.+++--+++ +++..+..-|.+...-..+-++.-++.++|-.| +|+-+++.+++..+.+=.+..+...
T Consensus 382 ~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L~-- 457 (618)
T KOG3762|consen 382 VMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYLQ-- 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHhc--
Confidence 333444445555555544 444444445544445566667778889999999 8999999999988888777777765
Q ss_pred ccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhh
Q 007582 106 KNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL-LATTVAAVIGVT 184 (597)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~ 184 (597)
|.|+.+..-+++|+..+.++.++.+|++...|++- |.++-++.+ ....+|-.+|.+
T Consensus 458 -----------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 458 -----------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred -----------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchhhh
Confidence 56788999999999999999999999999999776 777777766 345778888888
Q ss_pred hheeeecccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 185 GIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 185 ~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
++|.+.+.++-|..|.+.++..++.++++....+
T Consensus 515 IGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 515 IGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888888888898998888877777666555443
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00088 Score=73.46 Aligned_cols=127 Identities=11% Similarity=0.116 Sum_probs=86.8
Q ss_pred hhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhh
Q 007582 368 LYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFI 447 (597)
Q Consensus 368 l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 447 (597)
+..++.|++++|+. +.+|.++..++.++.++..... ...+.+.+.+..++.+++.....+
T Consensus 80 p~G~L~Dr~G~R~v-----------llig~ll~~iG~ll~ala~~~~---------i~~s~~~l~l~r~l~G~G~~~~~~ 139 (591)
T PTZ00207 80 PYSFIYDYLGPRPI-----------FVLSMTVFCLGTLLFALTFQEV---------IEGSVVRLSVYNGLMTLGCMLFDL 139 (591)
T ss_pred HHHHHHHHhCcHHH-----------HHHHHHHHHHHHHHHHHHhccc---------ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 45566666687765 6788888888887776642100 113556667777888999988888
Q ss_pred hHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHH
Q 007582 448 GLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNL 527 (597)
Q Consensus 448 ~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~ 527 (597)
.....+.+.+| +.||.+.|+......+|+.+.+.+...+.. .+...+|++++++.++..
T Consensus 140 ~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--------------------~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 140 GAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--------------------DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HhHHHHHHHHHHHHHHHH
Confidence 88888889997 679999999999999999765444433221 112345777777777766
Q ss_pred HHHHHhhc
Q 007582 528 VLYLYAAA 535 (597)
Q Consensus 528 v~~~~~~~ 535 (597)
++.+++.+
T Consensus 199 ll~~~~vr 206 (591)
T PTZ00207 199 ILAIVFMR 206 (591)
T ss_pred HHHHhhee
Confidence 65555443
|
|
| >KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.025 Score=57.30 Aligned_cols=156 Identities=12% Similarity=0.035 Sum_probs=97.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhH--hhhhHHHhh-----hccchhH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLL--CLVGGFISD-----TFLSRFA 83 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~--~~~~G~l~D-----~~~Gr~~ 83 (597)
++.+++++.+++..... ..-+|... ..+++-+.-|.|-++. ++|.....-. -++...+.| | +||||
T Consensus 27 ~~d~~~illLl~LYllQ-GiP~GL~~-~iP~lL~ak~vSyt~~----a~fS~ay~P~sLKllWaPiVDs~y~k~-~Grrk 99 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQ-GIPLGLIG-AIPLLLQAKGVSYTSQ----AIFSFAYWPFSLKLLWAPIVDSVYSKR-FGRRK 99 (510)
T ss_pred hhhhhhHHHHHHHHHHc-CCchhHhh-hhHHHhcCCCcchhhh----hhhhhhhhHHHHHHHHHhhhHHHHHHh-hcccc
Confidence 55667777666665555 56677888 5555555556665553 4444444433 457888889 8 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhh
Q 007582 84 TCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKA 163 (597)
Q Consensus 84 ~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~ 163 (597)
.-++-+ -+.+|.++..++...+.... |+.+-| +...+....++.-+..+..--++-.+.-.+..+++
T Consensus 100 sWvvp~-q~llG~~mllLs~~v~~~~g---~ng~~p---~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~------ 166 (510)
T KOG3574|consen 100 SWVVPC-QYLLGLFMLLLSYLVDRGLG---GNGGLP---NVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN------ 166 (510)
T ss_pred ceeeeh-HHHHHHHHHHHhhCCCcccc---cCCCCc---chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh------
Confidence 866544 45567777777654332211 121111 12223334456667777777788888777777554
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhh
Q 007582 164 LASYFNFYLLATTVAAVIGVTGI 186 (597)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~~~~~ 186 (597)
.|-+......+.+.|.+++..+.
T Consensus 167 lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred cCchhHHHHHHHhhhHHhhccee
Confidence 67777777788899999987654
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00047 Score=77.15 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=89.7
Q ss_pred CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--hhcc-------c--
Q 007582 351 TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR--RNAF-------N-- 419 (597)
Q Consensus 351 ~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~--~~~~-------~-- 419 (597)
.+.+...+.++..+..+++.++.++.+||+. +.+|.++++++.++.++..... +... .
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~-----------i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKLHRPIV-----------IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhcccCcceE-----------EEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 3455555666666666666666555566554 5678888888888877653111 0000 0
Q ss_pred ------C--C---------------CCc--cchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHH
Q 007582 420 ------E--T---------------PPK--QISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLS 474 (597)
Q Consensus 420 ------~--~---------------~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~ 474 (597)
. + ... ...+..+++.-++.|++.....+....++.|.+|++.|+++.++......
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 0 000 11244556678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 007582 475 FGYFLSSAFVDIINA 489 (597)
Q Consensus 475 l~~~i~~~~~~~i~~ 489 (597)
+|..++..+.+.+.+
T Consensus 219 iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQ 233 (633)
T ss_pred hhhHHHHHHHHHHHh
Confidence 999999988887654
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00088 Score=73.35 Aligned_cols=152 Identities=11% Similarity=-0.097 Sum_probs=87.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHH-HhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFI-ANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~ 89 (597)
+..+|.....+....+..++.+ .+.-+.+.. -+..+.+... .+...+......++..++.++.|| +|||+.++.+.
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~ 366 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGA 366 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhH
Confidence 3455555555555555554443 444444444 3444544332 444444556666777778999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 90 TLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 90 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
..+.++.++++........... +........+....+.......+..+....+.+|.+|.+- |++..+
T Consensus 367 ~~m~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~~s 434 (513)
T KOG0254|consen 367 AGMSICLVILAVVGVFALYYPN------SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKGAS 434 (513)
T ss_pred HHHHHHHHHHHHHHHHhccCCC------cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------HhhhHH
Confidence 9999999988876543211000 1111122222222233333344455656678899999766 777776
Q ss_pred HHHHHHHH
Q 007582 170 FYLLATTV 177 (597)
Q Consensus 170 ~~~~~~~~ 177 (597)
+-.....+
T Consensus 435 ~~~~~n~~ 442 (513)
T KOG0254|consen 435 LAVAVNWL 442 (513)
T ss_pred HHHHHHHH
Confidence 65443333
|
|
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0012 Score=67.37 Aligned_cols=156 Identities=14% Similarity=0.058 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig 95 (597)
....-.+..|+--..=-.+.++++.|+.+..|++..+++..++.+..+..+|.+++-++-.| +-..|.+.+.+++..+-
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill 315 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH
Confidence 33334444555544555677899999999899999999999999999999999999999889 78888888777655444
Q ss_pred HHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHH
Q 007582 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLAT 175 (597)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~ 175 (597)
.+..++..+ ..-+.+.++.|+..+.+.|++.+...+..|++. +..+-.-.+.
T Consensus 316 ~~~~~l~~g--------------------~v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~ma 367 (422)
T COG0738 316 LLAVALIGG--------------------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMA 367 (422)
T ss_pred HHHHHHhcC--------------------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeeh
Confidence 444444432 234556678999999999999999999999443 2223333355
Q ss_pred HHHHHHHhhhheeeecccchhHHHH
Q 007582 176 TVAAVIGVTGIVYVFTEKSWWLGFL 200 (597)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~w~~~f~ 200 (597)
.+|+++-|.+-|++.+..+-...+.
T Consensus 368 ivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 368 IVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eecchHHHHHHHHHHHhhhhHHHHH
Confidence 6888899999999998888776655
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0074 Score=63.78 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=77.3
Q ss_pred hhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHH
Q 007582 358 PLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCI 437 (597)
Q Consensus 358 ~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 437 (597)
...+..+.......+.|+++-|+. +.++++.-++..++.++. .+...+.+.-++
T Consensus 71 F~ysYal~qIp~GlLaDrlG~K~v-----------L~l~~l~Wsl~t~L~~fa---------------~Sl~~L~i~R~l 124 (511)
T TIGR00806 71 LPYSHLAVLVPVFLLTDYLRYKPV-----------LVLQALSFVCVWLLLLLG---------------TSVWHMQLMEVF 124 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHH-----------HHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHH
Confidence 344444444455555555565553 555666656665555553 245677888899
Q ss_pred HHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 438 FGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDII 487 (597)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i 487 (597)
.|++++... ....+++..+|++.|++++|+......+|.++++.+.+.+
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999999999999998874
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0023 Score=66.23 Aligned_cols=166 Identities=16% Similarity=0.073 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc---cchhHHHHH-HHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF---LSRFATCLI-FGT 90 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~---~Gr~~~i~~-~~~ 90 (597)
+.+..+..+.+...+.+-.=.++.++|+. .+|.+..-.+.+-.+-.+...+..|+.|..+||+ +||||-++. +..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 44444555555555665556667777765 5788877777777777888889999999999975 787776555 445
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCC-CCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGK-SSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
...++.++...+..+.... +-+ ..|.++.....++++..+.=+..-.....+-++.+|...+.+ +++| +.+
T Consensus 111 ~i~~~l~Lig~aaDig~~l---gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~---~~~~--Ans 182 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL---GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA---KKTR--ANS 182 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh---cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh---hhhc--cch
Confidence 5666666666665432221 111 224456678889999999999998899999999999987554 2223 888
Q ss_pred HHHHHHHHHHHHHhhhheee
Q 007582 170 FYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~ 189 (597)
++..++.+|..+|+..++|.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 99999999999998888755
|
|
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00066 Score=72.95 Aligned_cols=164 Identities=13% Similarity=0.091 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhc---cchhHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTF---LSRFATCLIFGTL 91 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~---~Gr~~~i~~~~~~ 91 (597)
..+|...+..++.....|+...+++.|+++..|++..+++.+...+.++..++.+++|+++||. +.+|..+.....+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4566778888888899999999999999996779999999999999999999999999999992 3566665555555
Q ss_pred HHH-HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 92 EVL-ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 92 ~~i-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+.+ |.+.+..... ......+-+....+.+...++......+....+. +|-...+.
T Consensus 353 ~~~~g~~~l~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~~~ 408 (495)
T KOG2533|consen 353 YAIIGAISLLAAAV-------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTVSA 408 (495)
T ss_pred HHHHHHHHHHhhcc-------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHHhh
Confidence 444 4344443321 1223333334445555566666666666664332 24555555
Q ss_pred HHHHHHHHHH-HHhhhheeeecccchhHHHHHH
Q 007582 171 YLLATTVAAV-IGVTGIVYVFTEKSWWLGFLVS 202 (597)
Q Consensus 171 ~~~~~~~g~~-~~~~~~~~~~~~~~w~~~f~i~ 202 (597)
+..+.+.+.+ .+++.-+.....+.|...|...
T Consensus 409 ~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 409 IIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred hhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 5555444444 4444445555667888887443
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0014 Score=58.84 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=75.0
Q ss_pred HHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHh
Q 007582 57 LTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSF 136 (597)
Q Consensus 57 ~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~ 136 (597)
.++......+.++++..+-++ +|.|+++++|.+.+.+=. .+...| +...++.+-++.|+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~----~~~~~~----------------~~~~l~~~s~l~G~ 101 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYI----ASFFYP----------------NSYTLYPASALLGF 101 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH----HHHHhh----------------hHHHHHHHHHHHhh
Confidence 344455556666778888899 899999999997666432 222222 45678889999999
Q ss_pred ccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 007582 137 GCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTG 185 (597)
Q Consensus 137 g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 185 (597)
|.+...+....++.+..+++. |++..+++....+.+.++|.++
T Consensus 102 ~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 102 GAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999887554 7777777766666666666543
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0004 Score=71.67 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=118.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhh--------HHHHHHHHH-HHHHhHhhhhHHHhhhccchhH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAG--------ASNTLTNFF-GSTFLLCLVGGFISDTFLSRFA 83 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~--------~~~i~~~~~-~~~~~~~~~~G~l~D~~~Gr~~ 83 (597)
|-+.++..+...|+--+++|+..-+...-++. ++..+.+ .+....+.. .+...+..+..++.|+ +|||+
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~ 379 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKY 379 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHH
Confidence 45677777788888888889887766655542 2222211 111222222 2223366677778999 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-cccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhh
Q 007582 84 TCLIFGTLEVLALVMLTIQAY-SKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAK 162 (597)
Q Consensus 84 ~i~~~~~~~~ig~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~ 162 (597)
..+.|.+++++-.+.++...+ ... +.....+..+..+ ++.-+..++.-.+-+|.||++-
T Consensus 380 iq~~GF~~~~i~~~~~~~~y~~~~~------------~~Gf~v~y~l~~f---f~NFGPn~ttfivpaE~FParv----- 439 (538)
T KOG0252|consen 380 IQLMGFFIMTIFFFVIAGPYNQLEN------------TIGFVVLYSLTFF---FGNFGPNATTFIVPAEIFPARV----- 439 (538)
T ss_pred HHHhhHHHHHHHHHHHcCCcccccc------------cCceeehHHHHHH---HHhcCCCceeEEeehhhchHHH-----
Confidence 999999988887766665543 110 0111222233333 4444455666677789999776
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhheeeec-----ccchhHHHHHHHHHHHHHHHHH
Q 007582 163 ALASYFNFYLLATTVAAVIGVTGIVYVFT-----EKSWWLGFLVSSVANFIGLIAL 213 (597)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~w~~~f~i~~~~~~~~~~~~ 213 (597)
|+.+.++.....-+|+.++...-.++.+ ..+.+.+|++.+.++++..+..
T Consensus 440 -R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T 494 (538)
T KOG0252|consen 440 -RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT 494 (538)
T ss_pred -hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee
Confidence 9999999988899999999888888877 6778889888888777666543
|
|
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0047 Score=67.77 Aligned_cols=128 Identities=17% Similarity=0.170 Sum_probs=89.0
Q ss_pred hHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHH
Q 007582 359 LLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIF 438 (597)
Q Consensus 359 ~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 438 (597)
.++.++++++.|+ +|||+. +..+.++.+++-+..++. .+++..++.-++.
T Consensus 132 ~vG~~i~g~lsD~----~GRk~~-----------~~~~~~~~~i~~~~~a~a---------------~~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 132 LVGSLIFGPLSDR----FGRKPV-----------LLVSLLLFIIFGILTAFA---------------PNYWMFLIFRFLS 181 (521)
T ss_pred HHHHhhheehHhh----cccHHH-----------HHHHHHHHHHHHHHHHHh---------------CcHHHHHHHHHHH
Confidence 4444555555555 498875 445666666555444433 4667777778889
Q ss_pred HHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHH
Q 007582 439 GIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWF 518 (597)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~ 518 (597)
|++........+.++.|+.+++.|+.++.+ ....+.++.+++....++.. +|. +.+++
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----------~Wr-----------~~~~~ 239 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR----------DWR-----------WLFWI 239 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh----------hHH-----------HHHHH
Confidence 999999999999999999999999999999 88888888888887776643 354 34555
Q ss_pred HHHHHHHHHHHHHHhhccccc
Q 007582 519 LAIVSVLNLVLYLYAAAWYKY 539 (597)
Q Consensus 519 ~~~~~~~~~v~~~~~~~~~~~ 539 (597)
..+.+++.++. +++.+|.++
T Consensus 240 ~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 240 ISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred HHHHHHHHHHH-HHccCcChH
Confidence 55555544443 555555543
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.012 Score=57.26 Aligned_cols=87 Identities=11% Similarity=0.052 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHH
Q 007582 392 RVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYL 471 (597)
Q Consensus 392 ~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~ 471 (597)
.+.+|.++..++..........+. .+.+.|.+.+..++.+.+..+.+.....-..+.+|. .||.+.|+...
T Consensus 68 ~l~iG~~~~~~GY~~~~l~~~~~i--------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~ 138 (250)
T PF06813_consen 68 VLLIGAVLGFVGYGLLWLAVSGRI--------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKG 138 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcc--------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhH
Confidence 367888888888777655432211 124555566555666666666667767777789985 79999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 007582 472 SLSFGYFLSSAFVDII 487 (597)
Q Consensus 472 ~~~l~~~i~~~~~~~i 487 (597)
..++++.+-+.+...+
T Consensus 139 ~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 139 FFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHhHHHHHHHHHHHH
Confidence 9999998877766554
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=96.76 E-value=1 Score=47.80 Aligned_cols=60 Identities=15% Similarity=0.027 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007582 426 ISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVD 485 (597)
Q Consensus 426 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~ 485 (597)
.+...++...++.-+|.-..-.....++.|..|++.||...|.-...+.+...+.-.++-
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445555566666666667777888889999999999999999988888887655543
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.044 Score=58.21 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHH
Q 007582 357 IPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYC 436 (597)
Q Consensus 357 ~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 436 (597)
...++..+..|....+ ..|. .+..+.+..|.+++.++.++...++... +-..+++.+..+
T Consensus 79 a~slg~~i~~liF~~W----s~k~------~~~k~Pli~s~ii~~~g~llY~~l~~~~----------~~~~y~mL~~R~ 138 (488)
T KOG2325|consen 79 ASSLGHAIFSLIFGIW----SNKT------GSVKKPLIVSFLIAIIGNLLYLALAYVP----------NGVKYLMLVARI 138 (488)
T ss_pred HHHHHHHhcchhhccc----cccc------CCcccCHHHHHHHHHHHHHHHHHHHhcc----------cchHHHHHHHHH
Confidence 3455555565655544 2221 1224558899999999999886654211 115577888899
Q ss_pred HHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHH
Q 007582 437 IFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFY 516 (597)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f 516 (597)
+.|+|.+..... =.|+....-.+.|.++++.......++..+|+.+.+.+.... ..|+....++.-+.+.-.=
T Consensus 139 l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg------~~G~~i~~~~~~n~YTap~ 211 (488)
T KOG2325|consen 139 LTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLG------EKGFMILPGLIFNMYTAPA 211 (488)
T ss_pred HcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhc------CCceEEcCcceEEecchHH
Confidence 999986655543 566666555566666666665555566666666555544322 2244321111111222234
Q ss_pred HHHHHHHHHHHHHHHHhhcccc
Q 007582 517 WFLAIVSVLNLVLYLYAAAWYK 538 (597)
Q Consensus 517 ~~~~~~~~~~~v~~~~~~~~~~ 538 (597)
|+.+.++++.+++.+++++|-.
T Consensus 212 w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 212 WLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHHHHHHHHHHHhheeecc
Confidence 5667777888887777777643
|
|
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=62.49 Aligned_cols=152 Identities=13% Similarity=0.091 Sum_probs=118.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHH-hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhH-HHhhhccchhHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGI-SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGG-FISDTFLSRFATCLIF 88 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G-~l~D~~~Gr~~~i~~~ 88 (597)
.++.|..+.++...++...-..+-.. .+..|+..+++++..+.+...+.......++.++.. .+.-. +|-|+++.+|
T Consensus 236 ~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lG 314 (463)
T KOG2816|consen 236 VGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLG 314 (463)
T ss_pred cCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHH
Confidence 55666677666655554444332222 456788899999999999999998888888888877 55666 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHH
Q 007582 89 GTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYF 168 (597)
Q Consensus 89 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~ 168 (597)
++...++..+.++++ +.++.+.+.++.++. +...|...++.+-+..+++ +|+.+
T Consensus 315 l~~~~~~~~~~af~~-------------------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~ 368 (463)
T KOG2816|consen 315 LLSEFLQLLLFAFAT-------------------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVF 368 (463)
T ss_pred HHHHHHHHHHHHHhc-------------------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchh
Confidence 999999999999987 345677776665544 6788889999999988776 99999
Q ss_pred HHHHHHHHHHHHHHhhhheee
Q 007582 169 NFYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 169 ~~~~~~~~~g~~~~~~~~~~~ 189 (597)
++....-.+...++|.+-+.+
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHH
Confidence 999998888888888875543
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.14 Score=57.33 Aligned_cols=313 Identities=10% Similarity=-0.023 Sum_probs=181.6
Q ss_pred chhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHH
Q 007582 49 DLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128 (597)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (597)
..........++.....+..+.....+|-.-|+-..+..-.+..+++.+...+... +. .+.........
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a----------~~~~~~~~~~~ 86 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GA----------IPSSGHPLHDL 86 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-cc----------CcccccchHHH
Confidence 34456678888999999999999999999777777777777777777777766652 11 01112234455
Q ss_pred HHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccc-hhH------HHH-
Q 007582 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKS-WWL------GFL- 200 (597)
Q Consensus 129 ~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-w~~------~f~- 200 (597)
+..+.+.++.++..+.-+.+.++++...+ ...+.+..++|++.++.+.+.+ +++..+..... +.. .|.
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiGS-lis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAGS-LISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccccCcchHH
Confidence 67777889999999999999999998654 5556789999999999888775 45544443322 211 132
Q ss_pred HHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhh
Q 007582 201 VSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLD 280 (597)
Q Consensus 201 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (597)
..++..++.++.++.....++..++++.....+.++....... ...
T Consensus 163 aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a----------------------------------~~~ 208 (654)
T TIGR00926 163 AFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTA----------------------------------LRK 208 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHH----------------------------------HHH
Confidence 3334444444444444333333222221111111111100000 000
Q ss_pred hcccCCCCCCCCCCcccc--ccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchh
Q 007582 281 KAAIMPKDSAVAAPWRVC--TVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIP 358 (597)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (597)
+.....+ .....|... .....++.+...+++.++.....+++.+.++......+....+...+.+.........++
T Consensus 209 ~~~~~~~--~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip~~~lq 286 (654)
T TIGR00926 209 RFSTRSE--HWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQPDQMQ 286 (654)
T ss_pred hhccCCc--ccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecCHHHHH
Confidence 0000000 000112111 112233456777777777777777777776655555555555544222222223455667
Q ss_pred hHHHHHHHHhhhhhHHHhhhhhcCCCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007582 359 LLFMSILLPLYEFFFVPFARKITGHPSGI-TQLQRVGIGLVLSAVSMTVAGLVEVIRRN 416 (597)
Q Consensus 359 ~i~~i~~~~l~~~~~~~~~rr~~~~~~~~-~~~~~~~~G~~~~~i~~~~~~~~~~~~~~ 416 (597)
.+-.++..++...+..++-++.. + . .++.++.-+.+.+.++.+.+++.......
T Consensus 287 ~~n~L~IIil~Pi~~~~lyp~l~-~---~~~~ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 287 VVNPLLILIFVPIFDYIVYPAIA-K---CGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred HHHHHHHHHhHHHHHHhHHHHHH-h---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888877667777763 1 3 35677788888888877777777655543
|
|
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.033 Score=56.63 Aligned_cols=152 Identities=13% Similarity=0.137 Sum_probs=113.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHc-ccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYF-KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl-~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
-..+..+....+-..-.|....+...++ ...+++++.|.|-+.+.-.+...+..+.-....|+..|.-+..+.-..+.+
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 4556666666665555666666666666 467999999999888887777777777778888885444344333333333
Q ss_pred H-HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 94 L-ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 94 i-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
+ ..++...+. ....++++..+-.+..+...++...++....|..+ ||...++..
T Consensus 340 vP~~llls~~~-------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~ 394 (451)
T KOG2615|consen 340 VPAFLLLSLAR-------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFR 394 (451)
T ss_pred HHHHHHHhccc-------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHH
Confidence 3 344444444 23578999999999999999999999999999776 999999999
Q ss_pred HHHHHHHHHHhhhheeeec
Q 007582 173 LATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~ 191 (597)
....++=++||+++|.+..
T Consensus 395 Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 395 SLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHhhhhhhheeEE
Confidence 9999999999999977654
|
|
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.018 Score=45.58 Aligned_cols=66 Identities=9% Similarity=0.013 Sum_probs=59.2
Q ss_pred hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 007582 37 SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQA 103 (597)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~ 103 (597)
.+.+.+.++.++|.++.+++.+...+|..++.+...++.++ ..+++.+..+.++..+..+.+++..
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667788999999999999999999999999999999999 6888999999988888888888775
|
Note that many members are hypothetical proteins. |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.1 Score=56.99 Aligned_cols=167 Identities=11% Similarity=0.013 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHH---HH
Q 007582 21 FVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA---LV 97 (597)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig---~~ 97 (597)
....|+..+...+.-....-.+...+|.+..+.+.++++|.++..+|..++|+++++ .-|+.. .+-..+.+++ ..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~-~~e~~i~l~~~~~~~ 97 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFV-AVELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHH-HHHHHHHHHHHHHHH
Confidence 333344444444444444445555678788888999999999999999999998755 333322 2211111111 11
Q ss_pred HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH
Q 007582 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV 177 (597)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (597)
+......+. ......++...++.++-.|+..|...-+..+.... + -++..+..|...++
T Consensus 98 ll~~~~~~~--------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-~------~g~~~g~ly~~ntl 156 (521)
T PRK03612 98 ILYAAFAFQ--------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-H------LGHNVATVLAADYL 156 (521)
T ss_pred HHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c------hhhhhhhhHhHHhH
Confidence 111111100 00112233444566777777766665555443221 1 34555666667777
Q ss_pred HHHHHhhhheeee-cccch-hHHHHHHHHHHHHHH
Q 007582 178 AAVIGVTGIVYVF-TEKSW-WLGFLVSSVANFIGL 210 (597)
Q Consensus 178 g~~~~~~~~~~~~-~~~~w-~~~f~i~~~~~~~~~ 210 (597)
|+++|.++.+++. ...|- +..+.+..+..++++
T Consensus 157 Ga~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 157 GALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 7777777766553 34553 344444333333443
|
|
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.02 Score=59.44 Aligned_cols=127 Identities=13% Similarity=0.008 Sum_probs=84.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.+.++.+........+|++...+-.-+. .-|++...+|.+.....++..++..+.|.++||.-.-|.++++......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 45555666666666666766665554443 44677788999999999999999999999999943344455555555555
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCC
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDEND 157 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~ 157 (597)
+..........+ ...+.++..-.+.|+..-+..|.-..+..|..-|..
T Consensus 345 ~~~~l~~~t~~~---------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~ 392 (480)
T KOG2563|consen 345 GTLMLLTCTLFL---------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA 392 (480)
T ss_pred HHHHHHHhhccC---------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC
Confidence 532222222111 133456666678888888899999999999865444
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0059 Score=64.17 Aligned_cols=117 Identities=13% Similarity=0.204 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcc--hhhHHHHHHH
Q 007582 393 VGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAG--MKTLASSFTY 470 (597)
Q Consensus 393 ~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~r~~~~~~~~ 470 (597)
+..|.++++++.++++... ..+...+.+..+++.+|.++.-+...+...++.|++ .|..+.++.+
T Consensus 95 I~lGail~~iGh~~L~~~~-------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY 161 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS-------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFY 161 (498)
T ss_pred HHHHHHHHHHHHHHHhccc-------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEE
Confidence 7889999999998887641 023345666677788999999999999999988743 4677788888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 007582 471 LSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKP 541 (597)
Q Consensus 471 ~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~ 541 (597)
+..++|+++++.+++.+... .|| +..|...++-..++++.+++.-+..++..
T Consensus 162 ~~iNiGsl~~p~i~~~~~~~--------~g~-----------~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 162 MGINIGSLIAPIITGLLAIN--------YGW-----------HVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred EEeehHHHHHHHHHHHHHHh--------hCH-----------HHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 88889999999999887542 233 34477777777777777776665555544
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.0032 Score=68.85 Aligned_cols=129 Identities=10% Similarity=0.081 Sum_probs=2.9
Q ss_pred CCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhc--c--c-------
Q 007582 351 TSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNA--F--N------- 419 (597)
Q Consensus 351 ~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~--~--~------- 419 (597)
.+.+...+-++.++...++.++ |+|. ++++.+.+|.++++++.+++++.+...... . .
T Consensus 40 ~G~i~s~~di~~~~~~~~vsy~----g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 40 SGLISSSYDIGSLVVVLFVSYF----GGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----hhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 3444445555555555555555 4442 455678899999999999987754211100 0 0
Q ss_pred -----C-------------------CCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHH
Q 007582 420 -----E-------------------TPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSF 475 (597)
Q Consensus 420 -----~-------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l 475 (597)
. +......++++++.-++.|+|..-..+...+|+-|-++++.-+.+.|+......+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 0 0001123455677788999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHhhh
Q 007582 476 GYFLSSAFVDIINAV 490 (597)
Q Consensus 476 ~~~i~~~~~~~i~~~ 490 (597)
|-.+|..++......
T Consensus 189 GPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 189 GPALGFLLGSFCLRI 203 (539)
T ss_dssp ---------------
T ss_pred cHHHHHHHHHHHHhc
Confidence 888887777665443
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.16 Score=49.17 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhHhhhhHHHhhhccchhH--HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHH
Q 007582 53 ASNTLTNFFGSTFLLCLVGGFISDTFLSRFA--TCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGS 130 (597)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~--~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (597)
.|.+.+.|++++.+++-+...+..+. |.+ .++--..+..+..+++...++..+ |.++++..-+++
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt~~vs-----------P~kes~~~s~i~ 350 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILTSSVS-----------PSKESPSESLIG 350 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHHhccC-----------CCcCCchHHHHH
Confidence 48999999999999998888887762 332 222222222233333443332211 113455566788
Q ss_pred HHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHH
Q 007582 131 LYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGL 210 (597)
Q Consensus 131 r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~ 210 (597)
..+.-.++|...|.+.-+=.+..|++. |...++++....|+-..++-...---..-.+-|..|.++.+...++.
T Consensus 351 F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 351 FCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred HHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHH
Confidence 888889999999999988888888666 99999999998888666653221000112345788988888877765
Q ss_pred HH
Q 007582 211 IA 212 (597)
Q Consensus 211 ~~ 212 (597)
+.
T Consensus 425 i~ 426 (454)
T KOG4332|consen 425 IL 426 (454)
T ss_pred HH
Confidence 54
|
|
| >KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.28 Score=49.41 Aligned_cols=127 Identities=13% Similarity=0.078 Sum_probs=72.4
Q ss_pred HhHHHHcc-cccCCchhhHH-HHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 007582 36 ISMVLYFK-NEMHFDLAGAS-NTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDC 113 (597)
Q Consensus 36 ~~~~~yl~-~~l~~~~~~~~-~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~ 113 (597)
+++.+|+. .+.+++..+.. -+.-...-...+.-+..=.++|- .-.|+++++-.+-+.....++.+..+..+
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~-lrYKPvivlq~ls~v~~w~~lv~g~sV~~------ 97 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDY-LRYKPVVVLQALSGVPVWIMLVFGPSVKA------ 97 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhh-hhcceeeeeeccchhHHHHHHHhcCCchh------
Confidence 35556665 45566655542 22222222222333444467898 78888888777666666666666553321
Q ss_pred CCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheee
Q 007582 114 GKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 114 ~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (597)
+- +.=+..|...++--+|-++++..-+|+. +.+..+....+.-.|...|...+-.+
T Consensus 98 -------------mQ----vlE~FyG~~tAaEIAYysYIYs~Vd~~~---Yqrvt~y~RaA~L~g~~~g~vlaQlL 153 (433)
T KOG3810|consen 98 -------------MQ----VLEFFYGPATAAEIAYYSYIYSKVDPEM---YKRVTGYCRAAFLVGKFVGSVLAQLL 153 (433)
T ss_pred -------------ee----eehhhcChHHHHHHhhhheeeeecCHHH---HHHHHHHhHHHHHHHhHHHhHHHHHH
Confidence 11 2223446666667777788877655443 66777777777767777666555433
|
|
| >KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.13 Score=57.11 Aligned_cols=102 Identities=10% Similarity=0.060 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCC
Q 007582 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDIN 508 (597)
Q Consensus 429 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~ 508 (597)
..+++.-++.|+|..-..+...+|+-|-+-.+.-..+.|+.+....+|-++|..++.+.....-+ . | .....++
T Consensus 238 llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD--~---~-~~~~~it 311 (735)
T KOG3626|consen 238 LLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD--F---G-LSPIGIT 311 (735)
T ss_pred HHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec--c---c-cCCCCCC
Confidence 34566778889999999999999999999999999999999999999999998888887665433 1 0 1100222
Q ss_pred CchhH-----H-HHHHHHHHHHHHHHHHHHhhcc
Q 007582 509 KNNVN-----L-FYWFLAIVSVLNLVLYLYAAAW 536 (597)
Q Consensus 509 ~~~~~-----~-~f~~~~~~~~~~~v~~~~~~~~ 536 (597)
..... | =|++.+++.++..+.++++-++
T Consensus 312 ~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 312 PTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 22111 1 2566666666666655554433
|
|
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.25 Score=51.60 Aligned_cols=124 Identities=16% Similarity=0.222 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcch---hhHHHHH
Q 007582 392 RVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGM---KTLASSF 468 (597)
Q Consensus 392 ~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~---r~~~~~~ 468 (597)
.+.+|.++..+|.+++.+.... ... .+..+...+.+...++++|.++.-|+...+..++++++. |..+-.+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~-----~~~-~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~ 76 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIP-----PSL-PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTS-----SSC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhc-----chh-hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHH
Confidence 4667888888888886654211 000 012344566777788999999999999999999999774 4445555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007582 469 TYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYK 540 (597)
Q Consensus 469 ~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 540 (597)
++...++|++++..+.+++.+ +.|| ...|.+.++..+++.+.++.-.+.++..
T Consensus 77 fY~~in~G~~~~~~~~~~i~~--------~~~~-----------~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 77 FYWGINIGSLFSPTLVPYIQQ--------NYGW-----------FLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHCCCHHHH--------CS-H-----------HHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHhhhhHhhcccchhhcc--------ccch-----------hhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 677778888887777776643 1233 3457777777777777666555555554
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=93.54 E-value=7.5 Score=39.74 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=61.0
Q ss_pred CcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHH
Q 007582 352 SSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWL 431 (597)
Q Consensus 352 ~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (597)
+.+.+......++++++++.+.|++|||+. .++..+...+.++.. ...+...+
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~---------------cl~~cily~~scl~k------------~~~~~~~L 124 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKKA---------------CLLFCILYSLSCLTK------------HSSNYPVL 124 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHH---------------HHHHHHHHHHHHHHH------------hccccHHH
Confidence 334444566777888999999999999874 222233333333221 12345667
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhh-----ccCcchhhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 007582 432 SFQYCIFGIADMFTFIGLLEFFYK-----EAPAGMKTLASSFTY-LSLSFGYFLSSAFVDII 487 (597)
Q Consensus 432 i~~~~~~~~~~~~~~~~~~~~~~~-----~~P~~~r~~~~~~~~-~~~~l~~~i~~~~~~~i 487 (597)
++.-++.|++..+.....=+|... -+|.+..+.--+..+ ..+.+..+++..+...+
T Consensus 125 ~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 125 LLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 777888899888877776665542 355554444333333 22333344444444433
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=93.24 E-value=2.1 Score=45.36 Aligned_cols=142 Identities=10% Similarity=0.024 Sum_probs=103.8
Q ss_pred HHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007582 29 MGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNL 108 (597)
Q Consensus 29 ~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~ 108 (597)
++.-+.-+.+..|+... |+++...|..-+.-.+....+..+..++-+| +|-.|+=+++.........++..+-..+.
T Consensus 272 ~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~- 348 (432)
T PF06963_consen 272 FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPG- 348 (432)
T ss_pred HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 33444556677888877 9999999999999899999999999999999 89999988888876665555444332221
Q ss_pred CCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe
Q 007582 109 HPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIV 187 (597)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 187 (597)
++ . ...+...++.+.++.=+|.=+..-+..-++-|..|+++ ||...+......++.-.+.+..+-
T Consensus 349 -~~------~-~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 349 -SP------F-SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred -CC------c-hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0 02245566666666667777777888888888888665 999999988888888888766554
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=91.98 E-value=3.6 Score=36.93 Aligned_cols=61 Identities=7% Similarity=0.099 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 427 SLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDII 487 (597)
Q Consensus 427 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i 487 (597)
+.+.+++.-++.|++....+...-.|+.+...++.|++..+++......+.++|..+...+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888999999999998889999999999999999998888888878777766555
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.33 E-value=1.6 Score=45.84 Aligned_cols=166 Identities=15% Similarity=0.026 Sum_probs=105.7
Q ss_pred HHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCC
Q 007582 307 KILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSG 386 (597)
Q Consensus 307 ~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~ 386 (597)
++++....+.+..++.|+.-.++.++++++. +.... -.+.+....++..++..|+++...|+.-.|+.+|
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk------~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR--- 101 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHK------WSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR--- 101 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcc------cccccccccccccceecccccccccccccccccc---
Confidence 4555566667778889999889988887763 33322 1233445567777777787777666644444321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC--CccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhH
Q 007582 387 ITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETP--PKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTL 464 (597)
Q Consensus 387 ~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~ 464 (597)
++ -+..+.++.++++++.++..........+.. .....+...++.+.+.=+..-....+.=++..+.+-...|.+
T Consensus 102 -RP--fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~ 178 (498)
T KOG0637|consen 102 -RP--FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT 178 (498)
T ss_pred -cc--hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh
Confidence 11 2567777788888877765433222222111 122344445555666666766666777888888877777777
Q ss_pred -HHHHHHHHHHHHHHHHHHHHH
Q 007582 465 -ASSFTYLSLSFGYFLSSAFVD 485 (597)
Q Consensus 465 -~~~~~~~~~~l~~~i~~~~~~ 485 (597)
+++.+.+.-.+||.+|-...+
T Consensus 179 ~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 179 RANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ccchhHHHHHHhcceeeeeccc
Confidence 999999888999988766654
|
|
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=90.93 E-value=2.3 Score=44.46 Aligned_cols=116 Identities=5% Similarity=-0.057 Sum_probs=80.2
Q ss_pred chhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHH
Q 007582 49 DLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFY 128 (597)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (597)
...+..+...+|.+|-+++.=..-++ | +-|-+.+-+-.++..+-.++.+.-...| +.+..+
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--r-ir~lwils~LQ~~nl~~~~l~s~~~fip----------------si~ivf 339 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--R-IRRLWILSLLQVINLVFLLLQSWYRFIP----------------SIWIVF 339 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--e-hhhHHHHHHHHHHHHHHHHHHHHHHHhh----------------HHHHHH
Confidence 35667778888888877775543333 3 3344444444444444444444443333 456677
Q ss_pred HHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheee
Q 007582 129 GSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYV 189 (597)
Q Consensus 129 ~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (597)
+..+..|+-.|+.+.+....+.|..++++ |...++...++-++|..++.+++-++
T Consensus 340 ~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 340 VLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 77888999999999999999999877554 89999999999999999987776443
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=90.67 E-value=3.7 Score=43.75 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=28.3
Q ss_pred hhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 452 FFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 452 ~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~ 488 (597)
|+.+...++.++.++..++..+.+|.+++..+.-.++
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 4445677888999999999888888888766655443
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=90.39 E-value=28 Score=37.20 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 429 FWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDII 487 (597)
Q Consensus 429 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i 487 (597)
++.++..+++++..+........+..+..+++.|..+..+..+...+|-..|+.+.-.+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555578889999999999999999999999999999999988888888887776543
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=90.13 E-value=5.4 Score=42.58 Aligned_cols=114 Identities=18% Similarity=0.156 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhc---cCcchhhHHHHH
Q 007582 392 RVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKE---APAGMKTLASSF 468 (597)
Q Consensus 392 ~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~P~~~r~~~~~~ 468 (597)
-+.+|.++..++.+..+.... ...+........++..++..+.-...-....|. -|.+ ||.-++.
T Consensus 61 Y~~i~~~~~~~~~~~~~~~~~-----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~ 128 (433)
T PF03092_consen 61 YMIIGWLLGAVSALVLALLPA-----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSF 128 (433)
T ss_pred HHHHHHHHHHHHHHHHHhccc-----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHH
Confidence 366677766655555554310 011223333444556666666666655566654 4666 8888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007582 469 TYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAW 536 (597)
Q Consensus 469 ~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~ 536 (597)
......+|+.++..+.+.+.+.. ++ +..|.+.+++.++..+..+++.+|
T Consensus 129 ~~~~~~~G~lv~~~l~G~l~~~~--------~~-----------~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 129 VWGVRSVGSLVGSLLSGPLLDSF--------GP-----------QGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHhhhhhhhcC--------CC-----------eEEehHHHHHHHHHHHHHHHhhhh
Confidence 88889999999888876654311 11 123666677766666666666665
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=89.79 E-value=25 Score=37.81 Aligned_cols=57 Identities=7% Similarity=0.047 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHh-hhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007582 433 FQYCIFGIADMFTF-IGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINA 489 (597)
Q Consensus 433 ~~~~~~~~~~~~~~-~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~ 489 (597)
..|+..-+...... ...|.++.|+...+.-.+--++..+..+++..+++.+...+..
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444433344 4889999999999999999999999999999998888776543
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.07 E-value=32 Score=35.99 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 007582 427 SLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFV 484 (597)
Q Consensus 427 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~ 484 (597)
+-+|.++...++++..+-.......++.+..|++.+..+..+..+....|-+.|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3466677778889999988898999999999999999988888887777777766654
|
|
| >KOG3097 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.70 E-value=5.3 Score=40.20 Aligned_cols=117 Identities=5% Similarity=-0.103 Sum_probs=71.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
++.-|+++++-..-++. +..|.-..++-.....+++. ...+.+- ......+++.+.+-.+ +|-|+++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~-f~a~~gl~nlq~~vn~~lg~--~sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLT-FTAYLGLQNLQTSVNYDLGT--VSLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHhcCccc--chhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 44557777555544444 44454445565555544442 2222222 2223334444466666 899999998875
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCC
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDE 155 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~ 155 (597)
.+. +...++-.| ++-.++.+-++.|+|.|.+...-.+|++++...
T Consensus 97 ~Y~----lyiA~Nl~p----------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 97 PYA----LYIAANLEP----------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHH----HHHHhhcch----------------hHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 443 333333222 455678888899999999999999999988763
|
|
| >KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.54 E-value=5.5 Score=39.75 Aligned_cols=116 Identities=10% Similarity=0.104 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccC--------------CchhhHHHHHHHHHHHHHhHhhhhHHHhhhc-cc
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMH--------------FDLAGASNTLTNFFGSTFLLCLVGGFISDTF-LS 80 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~--------------~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~-~G 80 (597)
....-.+..+|++++|..+.+-.-.-+.++.+ -.....|.+...-.+-+.+.-+.+-..-||+ +|
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 44445667889999988766666666655443 1112245555555555666666677778884 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhccc
Q 007582 81 RFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQ 152 (597)
Q Consensus 81 r~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~ 152 (597)
.| +.+..++.+.|..+.+++. +.++-++|..+..++.|.-..+.-++-+..
T Consensus 93 ~R--i~~~v~~sa~s~~lVafs~-------------------s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 93 FR--IALVVLLSALSFFLVAFSN-------------------SVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred hH--HHHHHHHHhcceEEEEecc-------------------chhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 44 3344445556666666654 455788899999999998777766654443
|
|
| >PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions | Back alignment and domain information |
|---|
Probab=88.26 E-value=42 Score=36.38 Aligned_cols=164 Identities=10% Similarity=-0.035 Sum_probs=87.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHH-HHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFG-STFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
++.++.+.++-||..+.|. +.=.+.+-+.-.- .+......+-.-..+ ++.+...+-.+++++ ++|.+++.+....+
T Consensus 23 ~~k~~~l~~m~f~i~f~y~-~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYT-ILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHH
Confidence 3556656666666655544 3322332221111 134444555443333 556667889999999 89999888777666
Q ss_pred HHHHHHHHHHhhccc---CCCCCCCCCCcCC------c--------hhHHHHHHHHHHHHh-ccccCcccchhhhcccCC
Q 007582 93 VLALVMLTIQAYSKN---LHPPDCGKSSCLK------G--------AIAAYFYGSLYLYSF-GCGGNRGTLPAFGAGQFD 154 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~---~~~~~~~~~~~~~------~--------~~~~~~~~~r~l~g~-g~g~~~~~~~~~~~e~~~ 154 (597)
..-.++.++.- +|. +++. +.|++ + -+.|.+.+--+..-+ |.-.++-.-..+.-|+++
T Consensus 100 ~~fF~~f~~vl-yP~~~~lhp~----~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 100 LGFFALFAFVL-YPNRDILHPD----AFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHH-hhchhhcCCC----HHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65554444331 111 1100 00000 0 011111111111111 111122235778889988
Q ss_pred CCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeeec
Q 007582 155 ENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFT 191 (597)
Q Consensus 155 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (597)
.++ -.|.+.++..+.|+|..++.....++.+
T Consensus 175 ~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 VEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 6699999999999999999887766655
|
One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane |
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=88.15 E-value=37 Score=35.68 Aligned_cols=61 Identities=16% Similarity=0.277 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007582 427 SLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIIN 488 (597)
Q Consensus 427 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~ 488 (597)
+..++-+.-++.|++... -..-++|++...|++.--++++..-...-+|.++++.++..+.
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555665444 4556789999999999999999888888888888888887664
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=86.13 E-value=4.8 Score=42.97 Aligned_cols=155 Identities=12% Similarity=-0.037 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHccccc-CCchh-hHHHHHHHHHHHHHhHhhhhHHHhhhccchh-HHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEM-HFDLA-GASNTLTNFFGSTFLLCLVGGFISDTFLSRF-ATCLIFGTL 91 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l-~~~~~-~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~-~~i~~~~~~ 91 (597)
|.+|...+..++..+....+.+.........- +.++. ..-.+..+|+++..+|..+..+.- . -++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~-p~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-W-PDEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-e-eCCCccchHHHHHH
Confidence 55555666666665555555554444433221 12332 445778889999999988776542 1 1222 244444444
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCcC-CchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 92 EVLALVMLTIQAYSKNLHPPDCGKSSCL-KGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 92 ~~ig~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
-.+-.-+..++..-+. .+-| .-.+-+..++..++.|+..|-..+....+..+..++++ |..+-.+
T Consensus 347 R~iFIPlf~lcn~~~~--------~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~ 412 (437)
T TIGR00939 347 RVLFIPLFLLCNYPQR--------SRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGAL 412 (437)
T ss_pred HHHHHHHHHHhcCCcc--------ccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHH
Confidence 4333222222221110 0000 01234556677889999999999999999999877443 5555566
Q ss_pred HHHHHHHHHHHHhhh
Q 007582 171 YLLATTVAAVIGVTG 185 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~ 185 (597)
..++.++|..+|..+
T Consensus 413 ~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 413 MVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666776666543
|
|
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=85.04 E-value=15 Score=39.24 Aligned_cols=111 Identities=16% Similarity=0.106 Sum_probs=70.2
Q ss_pred HHHHhHhhhhHHHh---hhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCC---cCCchhHHHHHHHHHHHH
Q 007582 62 GSTFLLCLVGGFIS---DTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSS---CLKGAIAAYFYGSLYLYS 135 (597)
Q Consensus 62 ~~~~~~~~~~G~l~---D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~g 135 (597)
.+..++.+..+.++ ++ +||++++.++.++..++.++.-+.. |...+ ..+.+ -+...+.....+--+++|
T Consensus 290 ~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~dap--~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PNDAP--LRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cccCC--CCCCcccccccccchhHHHHHHHHHh
Confidence 33344445555554 66 8999999999999999888776653 21110 00100 001223444555557899
Q ss_pred hccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 007582 136 FGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184 (597)
Q Consensus 136 ~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 184 (597)
++-+...+....++++.+|+ + |..+++++-+...+++.++.+
T Consensus 365 ~~D~~~~t~~~~ii~~~~~~-~------~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYPD-D------RAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcC-c------hHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999953 3 566666665555565555433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Length = 524 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 2e-93
Identities = 88/541 (16%), Positives = 180/541 (33%), Gaps = 58/541 (10%)
Query: 15 RACTFVFVFSALENMGFIANGIS--MVLYFKNEMHFDL------AGASNTLTNFFGSTFL 66
R ++ A E F G+ + + + + A A + +F +
Sbjct: 12 RQIPYIIASEACERFSFY--GMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYF 69
Query: 67 LCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAY 126
L+GG+I+D F ++ T L + + L I +S
Sbjct: 70 FPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHS------------------VQG 111
Query: 127 FYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVTGI 186
FY L+L + G GG + + +F QFD+++ F+ + + +
Sbjct: 112 FYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKS---LAQKAFDMFYFTINFGSFFASLSM 168
Query: 187 VYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKL 246
+ + F + V F+ + G+ Y P V+ A+ +
Sbjct: 169 PLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVE 228
Query: 247 SLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAI-------MPKDSAVAAPWRVCT 299
+ L I A IP L A + + +
Sbjct: 229 GKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHP 288
Query: 300 VTQVEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPL 359
V+ V+ + R++ + A + Q + I Q M + + +
Sbjct: 289 DAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMV---KPQWFEPAMMQALNP 345
Query: 360 LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFN 419
L + +L+P F P ++ + L+++G G+ ++ +S V G ++++
Sbjct: 346 LLVMLLIPFNNFVLYPAIERMGVKLT---ALRKMGAGIAITGLSWIVVGTIQLMMDGGS- 401
Query: 420 ETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFL 479
+S+FW Y + ++ LEF Y +AP MK SF LS++ G
Sbjct: 402 -----ALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLW 456
Query: 480 SSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKY 539
+ + T + + + +F A ++L +++ A Y+
Sbjct: 457 VLLANVSVKSPT-----VTEQIV---QTGMSVTAFQMFFFAGFAILAAIVFALYARSYQM 508
Query: 540 K 540
+
Sbjct: 509 Q 509
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 2e-11
Identities = 64/442 (14%), Positives = 119/442 (26%), Gaps = 111/442 (25%)
Query: 193 KSWWLGFLVSSVANFIGLIA--------LAAGKCLYRIQQPGESPLVRVAQVLVVAIKNR 244
K+W + V + L C P ++ + Q L+ I
Sbjct: 163 KTW----VALDVCLSYKVQCKMDFKIFWLNLKNC----NSPET--VLEMLQKLLYQIDPN 212
Query: 245 KLSLPDNPEEL-YEINE-KERASTWERIPHANQF-RCLDKAAIMPKDSAVAAPWRV---- 297
S D+ + I+ + R+ + + CL ++ + V
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELR---RLLKSKPYENCLL---VL--LN-VQNAKAWNAFN 263
Query: 298 --CTVTQVEEVKIL--TRMMPILASTILMNTCLAQLQTFS--ITQGAAMDPHLGSIKVPT 351
C KIL TR + T L S +T L +
Sbjct: 264 LSC--------KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 352 SSIP-----VIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTV 406
+P P +SI A I + + V + + + ++
Sbjct: 316 QDLPREVLTTNPRR-LSI-----------IAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 407 AGLVEVIRRNAFNE---------TPPKQISLFWL-SFQYCIFGIADMFTFIGLLEFFYKE 456
L R F+ P +SL W + + + + L+E KE
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 457 APAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTKRI-----TPSKQGWLHGKDINKNN 511
S+ + S+ Y ++ A+ + I P D+
Sbjct: 424 ---------STISIPSI---YLELKVKLENEYALHRSIVDHYNIPKT---FDSDDLIPPY 468
Query: 512 V-NLFYWFLAIVSVLNLVLY-LYAAAWYKYKPENCSDIKPKPLMDPSAKEEKIDQDDGKA 569
+ FY + + L + + +D E+KI D
Sbjct: 469 LDQYFYSHIG---------HHLKNIEHPER-----MTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 570 KQYGAASSDDGIIGKEKEFIHD 591
G+ + + K +I D
Sbjct: 515 NASGSILNTLQQLKFYKPYICD 536
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 2e-06
Identities = 71/485 (14%), Positives = 124/485 (25%), Gaps = 192/485 (39%)
Query: 154 DENDPKGAKALASYFNFY--LLATT----VAAVIGVTGIVYVFTEKSWWLGF----LVSS 203
+ + K A FN +L TT V + ++ + + S
Sbjct: 252 NVQNAKAWNA----FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM-TLTPDEVKSL 306
Query: 204 VANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINE--K 261
+ ++ + L + +P LS+ I E +
Sbjct: 307 LLKYLDCRP----QDL-PREVLTTNPRR--------------LSI---------IAESIR 338
Query: 262 ERASTWERIPHANQ----------FRCLDKA---------AIMPKDSAVAAPWRVCTVTQ 302
+ +TW+ H N L+ A ++ P
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS-------------- 384
Query: 303 VEEVKILTRMMPIL---ASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPL 359
I T ++ ++ + + +L +S+ P K T SIP
Sbjct: 385 ---AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL---VEKQP-----KESTISIP---- 429
Query: 360 LFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFN 419
SI L ++ L R +V+ N
Sbjct: 430 ---SIYL------------ELKVKLENEYALHRS---------------IVD--HYNIPK 457
Query: 420 ETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFL 479
+ +L QY ++ IG + + F + L F
Sbjct: 458 TFDSDDLIPPYL-DQY-------FYSHIG-----HHLKNIEHPERMTLFRMVFLDF---- 500
Query: 480 SSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKY 539
+L K I ++ A S+LN + L Y
Sbjct: 501 --------------------RFLEQK-IRHDSTAW----NASGSILNTLQQL-----KFY 530
Query: 540 KPENCSDIKPKP------LMD--PSAKEEKIDQDDGKAKQYGAASSDDGIIGKEKEFIHD 591
KP C D PK ++D P +E I + + E E I +
Sbjct: 531 KPYIC-DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA--------LMAEDEAIFE 581
Query: 592 EVKSQ 596
E Q
Sbjct: 582 EAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 23/150 (15%)
Query: 304 EEVKILTRMMPILASTILMNTCLAQLQTFSITQ---GAAMDPHLGSIKVPTSSIPVIPLL 360
EE+ + ++ T+ + L Q + Q + + + P + P +
Sbjct: 49 EEIDHIIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEVLRINYKFLMSPIKTEQRQPSM 107
Query: 361 ----FMSILLPLY----EF--FFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAG-- 408
++ LY F + V + + +L R +++ + +G
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL-RPAKNVLI--DGVLGSGKT 164
Query: 409 -LV-EVIRRNAFNETPPKQISLFWLSFQYC 436
+ +V +I FWL+ + C
Sbjct: 165 WVALDVCLSYKVQCKMDFKI--FWLNLKNC 192
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 32/185 (17%), Positives = 70/185 (37%), Gaps = 28/185 (15%)
Query: 38 MVLYF-----KNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92
++ Y ++H A A++ + + +L +GGF++D + G L
Sbjct: 36 LLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLI 95
Query: 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQ 152
+L ++L + P A+ +GS+ L G G + +
Sbjct: 96 MLGHIVLAL--------PFG-----------ASALFGSIILIIIGTGFLKPNVSTLVGTL 136
Query: 153 FDENDPKGAKALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIA 212
+DE+D + + F+ ++ + A I + + + F ++++ FIGL+
Sbjct: 137 YDEHDRR----RDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLV 192
Query: 213 LAAGK 217
G
Sbjct: 193 YYFGG 197
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 8e-05
Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 26/180 (14%)
Query: 38 MVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLS--RFATCLIFGTLEVLA 95
Y K HF L +S + + L+ G++SD R AT + F TL +A
Sbjct: 275 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 334
Query: 96 LVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDE 155
++ + + N + + +G G E
Sbjct: 335 TIVYWM-NPAGNP-------------TVDMICMIVIGFLIYGPVMLIGLHAL-------E 373
Query: 156 NDPKGAKALAS-YFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214
PK A A+ + +V + Y W GF+V + + +I L
Sbjct: 374 LAPKKAAGTAAGFTGL--FGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 431
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 597 | |||
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 100.0 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 100.0 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.97 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.94 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.93 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 99.88 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.84 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.37 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.2 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.13 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.03 | |
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 98.9 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 98.76 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 98.15 |
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=311.85 Aligned_cols=433 Identities=12% Similarity=0.036 Sum_probs=256.6
Q ss_pred HhHHhHHHHcccccC--------CchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007582 33 ANGISMVLYFKNEMH--------FDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAY 104 (597)
Q Consensus 33 ~v~~~~~~yl~~~l~--------~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~ 104 (597)
++++...+++.++++ .+..+.+++++++.+|..++++++|+++|| +|||++++++.+++.+++++++.+..
T Consensus 29 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr-~GRk~~l~~~~~l~~i~~i~~a~~~~ 107 (491)
T 4gc0_A 29 AVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISGVGSAWPEL 107 (491)
T ss_dssp HGGGGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445545555554442 234567899999999999999999999999 89999999999999999999986431
Q ss_pred cccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 007582 105 SKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTVAAVIGVT 184 (597)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 184 (597)
......... .-...-..+..+++++|+++|+|.|+..+..+++++|.+|++. |++..++++.+..+|..+++.
T Consensus 108 ~~~~~~~~~-~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~------rg~~~~~~~~~~~~g~~~~~~ 180 (491)
T 4gc0_A 108 GFTSINPDN-TVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHI------RGKLVSFNQFAIIFGQLLVYC 180 (491)
T ss_dssp TTSCSSSSS-SCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGG------HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcchh-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHh------hhhhHHhhhhhhhhhhhhhhh
Confidence 110000000 0000002367899999999999999999999999999999665 999999999999999999887
Q ss_pred hheeeec--------ccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhh
Q 007582 185 GIVYVFT--------EKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEELY 256 (597)
Q Consensus 185 ~~~~~~~--------~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 256 (597)
++..+.. ...||+.+.+..+..++..+..+. .||+|+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~peSp~~L~ 228 (491)
T 4gc0_A 181 VNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYT--------------------------------VPESPRWLM 228 (491)
T ss_dssp HHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGG--------------------------------SCCCHHHHH
T ss_pred cchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhc--------------------------------CCCChHHHH
Confidence 7654432 245777776665554433332221 233333333
Q ss_pred hhhhhhhcccc-cccCCCCc--cchhh-hcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchh
Q 007582 257 EINEKERASTW-ERIPHANQ--FRCLD-KAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTF 332 (597)
Q Consensus 257 ~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 332 (597)
..++.+++.+. .+....+. ....+ +.....++ ..... ......++.........+++..+.....++..
T Consensus 229 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (491)
T 4gc0_A 229 SRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGR--KTGGR-----LLMFGVGVIVIGVMLSIFQQFVGINVVLYYAP 301 (491)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTH-----HHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhh--hhhhH-----HHHhcccHHHHHHHHHHHHHHhhhhHHHhcch
Confidence 22221111111 00000000 00000 00000000 00000 00000112222333333344433333333343
Q ss_pred HHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 007582 333 SITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEV 412 (597)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~ 412 (597)
.+.+..+.+.. ..........+..++...+...+.|++|||+. +..+...++++++..+....
T Consensus 302 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~-----------~~~~~~~~~~~~~~l~~~~~ 364 (491)
T 4gc0_A 302 EVFKTLGASTD------IALLQTIIVGVINLTFTVLAIMTVDKFGRKPL-----------QIIGALGMAIGMFSLGTAFY 364 (491)
T ss_dssp HHHHHSSCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcc------chhhHHHHHHHHHHHHHHHHHHHHHhhcCcch-----------hccchHHHHHHHHHHHHHHh
Confidence 33332222211 11112233344444555556666667788864 45666666666666554421
Q ss_pred HHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 007582 413 IRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSFGYFLSSAFVDIINAVTK 492 (597)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~ 492 (597)
. ....+..++..+++.......+.+..+.+..|++|.+.|++++|+.+..+++++++++.+.|.+.....
T Consensus 365 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~ 434 (491)
T 4gc0_A 365 T----------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW 434 (491)
T ss_dssp T----------TCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHH
T ss_pred c----------ccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112333334344444455556678889999999999999999999999999999999998887643211
Q ss_pred ccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCC
Q 007582 493 RITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPENCSDIKPKPL 552 (597)
Q Consensus 493 ~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~ 552 (597)
... ..+..+.|++++++++++.++.+++.||||+|++||+|+.++++
T Consensus 435 ---------~~~----~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~ 481 (491)
T 4gc0_A 435 ---------LVA----HFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPE 481 (491)
T ss_dssp ---------HHH----HHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC--
T ss_pred ---------HHh----hhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCC
Confidence 100 01122458899999999999999999999999999999988654
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=287.76 Aligned_cols=449 Identities=17% Similarity=0.237 Sum_probs=299.1
Q ss_pred hhhcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccc-----cCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchh
Q 007582 8 IKQKGGFRACTFVFVFSALENMGFIANGISMVLYFKNE-----MHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRF 82 (597)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~-----l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~ 82 (597)
.+.++++|..+.++...+++++++|++.++++.|+.+. +|.+..+.+++.+.+.++..++.+++|+++||++|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r 85 (491)
T 4aps_A 6 KTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGAR 85 (491)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHH
T ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 34466789999999999999999999999999999988 9999999999999999999999999999999944999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhh
Q 007582 83 ATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAK 162 (597)
Q Consensus 83 ~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~ 162 (597)
+++.++.++..++.+++++++ +.+.++++|+++|+|.|...+...++++|++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~---- 142 (491)
T 4aps_A 86 PAVFWGGVLIMLGHIVLALPF-------------------GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDR---- 142 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC-------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTT----
T ss_pred HHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccc----
Confidence 999999999999999888765 345799999999999999999999999999997652
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecC---CCC-ChhHHHHHHH-
Q 007582 163 ALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQ---PGE-SPLVRVAQVL- 237 (597)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~- 237 (597)
+|+..+++++...++|..++|.+++++.+..+||++|++.++..+++.++++...+++..++ ++. .+..+..+..
T Consensus 143 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (491)
T 4aps_A 143 RRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLV 222 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHHHHH
T ss_pred cceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCccccchhHHHHH
Confidence 27788999999999999999999999988899999999987777666666555444432221 111 1111111100
Q ss_pred -------------HHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhH
Q 007582 238 -------------VVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVE 304 (597)
Q Consensus 238 -------------~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (597)
.........+ .+.+........... ...+..+ ...+. .....
T Consensus 223 ~~g~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~--~~~~~-----------~~~~~ 277 (491)
T 4aps_A 223 KVSLAVAGFIAIIVVMNLVGWNS-LPAYINLLTIVAIAI-----------PVFYFAW--MISSV-----------KVTST 277 (491)
T ss_dssp HCCCCCHHHHHHHHHHHHHSSCC-TTHHHHHHHHHHHHH-----------HHHHHHH--HC-------------------
T ss_pred HHHHHHHHHHHHHHHHHhccCcc-cccchhhhhHHHHHH-----------HHHHHHH--Hhhcc-----------cccHH
Confidence 0001111110 000000000000000 0000000 00000 00011
Q ss_pred HHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhh-cCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCC
Q 007582 305 EVKILTRMMPILASTILMNTCLAQLQTFSITQGAA-MDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGH 383 (597)
Q Consensus 305 ~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~ 383 (597)
++++......++.....++..+.+..+.+..+... .+.+ ....+.....+.+..++..++.+++.|+++||..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~-- 351 (491)
T 4aps_A 278 EHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSS----WFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQP-- 351 (491)
T ss_dssp ----CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCS----SSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccC----ccCHHHHhccchHHHHHHHHHHHHHHHHHhccCC--
Confidence 22333333444444455555555555544333222 1111 1345666677788888888999998888887753
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhh
Q 007582 384 PSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKT 463 (597)
Q Consensus 384 ~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~ 463 (597)
....++.+|.+++++++++........ .. ....+.+++++.+++.+++.....+..+.++.|.+|++.|+
T Consensus 352 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g 421 (491)
T 4aps_A 352 ----SSPTKFAVGLMFAGLSFLLMAIPGALY---GT---SGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNS 421 (491)
T ss_dssp -----CHHHHHHHHHHHHHHHTTTHHHHHHC---CC---CTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSS
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHHHhc---CC---CCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHH
Confidence 455667788888888887776653211 00 01345667778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007582 464 LASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYK 540 (597)
Q Consensus 464 ~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 540 (597)
.++++.+....+++.+++.+.+.+.+ .+....|.+++++++++.++.+++.++.+++
T Consensus 422 ~~~g~~~~~~~~g~~i~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (491)
T 4aps_A 422 QMMSMWFLSSSVGSALNAQLVTLYNA--------------------KSEVAYFSYFGLGSVVLGIVLVFLSKRIQGL 478 (491)
T ss_dssp SSTHHHHHHHHHHHHHHHHHGGGGGG--------------------SSTTHHHHHTHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888766532 1223457888888888888777777665544
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=283.45 Aligned_cols=478 Identities=18% Similarity=0.286 Sum_probs=288.2
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccC------CchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc-chh
Q 007582 10 QKGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMH------FDLAGASNTLTNFFGSTFLLCLVGGFISDTFL-SRF 82 (597)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~------~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~-Gr~ 82 (597)
.++++|.++.+.+..++.++++|++.++++.|+.+++| ++..+.+++.+++.++..++.+++|+++|| + |||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~~g~r 85 (524)
T 2xut_A 7 APKWPRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADR-FFGKY 85 (524)
T ss_dssp ------CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTT-SSCSH
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcch
Confidence 35567888899999999999999999999999999999 999999999999999999999999999999 8 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhh
Q 007582 83 ATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAK 162 (597)
Q Consensus 83 ~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~ 162 (597)
+++.++.++..++.++++++. .+.+.++++|++.|+|.|...+...++++|.+|+++ +.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---r~ 144 (524)
T 2xut_A 86 NTILWLSLIYCVGHAFLAIFE------------------HSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSN---KS 144 (524)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS------------------SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTT---TT
T ss_pred HHHHHHHHHHHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccc---hH
Confidence 999999999999999888764 135678999999999999999999999999999766 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHH
Q 007582 163 ALASYFNFYLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIK 242 (597)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (597)
++...+++++...++|..++|.+++++.+..+|+++|++.+++.+++.++++...+++..+++++++..+..+.+....+
T Consensus 145 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (524)
T 2xut_A 145 LAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALL 224 (524)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHh
Confidence 22455666999999999999999999888889999999988877766666555555443333322222221122222222
Q ss_pred hcCCCCCCCchhhhhhhhhhhcccc-cccCC-----------------CCccch--hhhcccCCCCCCCCCCccccccch
Q 007582 243 NRKLSLPDNPEELYEINEKERASTW-ERIPH-----------------ANQFRC--LDKAAIMPKDSAVAAPWRVCTVTQ 302 (597)
Q Consensus 243 ~~~~~~p~~~~~l~~~~~~~~~~~~-~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 302 (597)
+++.+ ++......+.......... ..... ..+.+| .++.+... ....
T Consensus 225 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 291 (524)
T 2xut_A 225 TKVEG-KGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSH------------PDAA 291 (524)
T ss_dssp --CTT-HHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSC------------CSSS
T ss_pred hhhcc-cCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhccc------------cHhH
Confidence 21110 0000000000000000000 00000 000011 11110000 0001
Q ss_pred hHHHHHHHhHhhHHHHHHHhHhhhcccchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcC
Q 007582 303 VEEVKILTRMMPILASTILMNTCLAQLQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITG 382 (597)
Q Consensus 303 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~ 382 (597)
.+++++.+....++.....++..+.+..+.+..+....+... + ...+.+...+.+..++..++.+++..+..+|...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (524)
T 2xut_A 292 VDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKPQ--W-FEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGV 368 (524)
T ss_dssp STTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHSCCCS--S-SCHHHHHTTSGGGHHHHGGGTTTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhcCCCe--e-ecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCC
Confidence 112233333334444444445555565555555544443221 0 1234455566677788888888876454444322
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchh
Q 007582 383 HPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMK 462 (597)
Q Consensus 383 ~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r 462 (597)
+ .+..+.+.+|.+++++++++.++..... +.....+.+++++.+++.++++....+..++++.+.+|++.|
T Consensus 369 ~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~ 439 (524)
T 2xut_A 369 K---LTALRKMGAGIAITGLSWIVVGTIQLMM------DGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMK 439 (524)
T ss_dssp -----CCHHHHHTHHHHHHHHHHTTTTTTTTT------TTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCC
T ss_pred C---CChHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 1 3455667778777777766554431000 000123556777788999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 007582 463 TLASSFTYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKYKPE 542 (597)
Q Consensus 463 ~~~~~~~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 542 (597)
+.++|+.++..++++.+++.+.+.+.+... .+|....+. +...+.|++++++++++.++++++.+++++++.
T Consensus 440 g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (524)
T 2xut_A 440 GTIMSFWTLSVTVGNLWVLLANVSVKSPTV------TEQIVQTGM--SVTAFQMFFFAGFAILAAIVFALYARSYQMQDH 511 (524)
T ss_dssp TTTHHHHGGGHHHHHHHHHHHHHHTTSCHH------HHHHHHHHS--CHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccccc------ccccccccc--cccccHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 999999999999999999999887643110 012100000 011233778888888888877777777665543
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=245.56 Aligned_cols=400 Identities=11% Similarity=-0.026 Sum_probs=248.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
++.++.++...++..+..+.+...+ +++.+++ .+..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~ 103 (451)
T 1pw4_A 27 WQIFLGIFFGYAAYYLVRKNFALAM-PYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAA 103 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHH-HHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHh-cCchHHHHHHHHHHH
Confidence 4555566666666665555444444 4556667 899999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHH----HhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHH
Q 007582 94 LALVMLTI----QAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFN 169 (597)
Q Consensus 94 ig~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~ 169 (597)
++.+++++ +.+ .+.++++|+++|+|.|...+...++++|.+|+++ |++.++
T Consensus 104 ~~~~~~~~~~~~~~~-------------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~ 158 (451)
T 1pw4_A 104 AVMLFMGFVPWATSS-------------------IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVS 158 (451)
T ss_dssp HHHHHHHHCHHHHSS-------------------SSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHH
T ss_pred HHHHHHHhhhhcccc-------------------HHHHHHHHHHHHHHhhhccchHHHHHHHHCCchh------hhHHHH
Confidence 99999988 653 4478999999999999999999999999999665 999999
Q ss_pred HHHHHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCC
Q 007582 170 FYLLATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSL 248 (597)
Q Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (597)
+.+...++|..++|.+++++.+..+ ||++|++.+++.++..++.+...|+.+......+. .+.
T Consensus 159 ~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 222 (451)
T 1pw4_A 159 VWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPI----------------EEY 222 (451)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSC----------------TTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCCh----------------hhh
Confidence 9999999999999999988777788 99999998877666555544443321111000000 000
Q ss_pred CCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcc
Q 007582 249 PDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQ 328 (597)
Q Consensus 249 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 328 (597)
.+. .+.+. ++ ..+ ++..++.....+.-..+.+.......+...........
T Consensus 223 ~~~----~~~~~-------------------~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (451)
T 1pw4_A 223 KND----YPDDY-------------------NE---KAE---QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILD 273 (451)
T ss_dssp CCC------------------------------------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc----ccccc-------------------hh---hhh---cccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000 00 000 00000000000000011221111111111111111111
Q ss_pred cchhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHh--hhhhcCCCCCCCchHHHHHHHHHHH-HHHH
Q 007582 329 LQTFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPF--ARKITGHPSGITQLQRVGIGLVLSA-VSMT 405 (597)
Q Consensus 329 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~--~rr~~~~~~~~~~~~~~~~G~~~~~-i~~~ 405 (597)
+.+.+..+..+.+ ....+.......+..++..++..++.|++ +||+. +.++.++.. ++++
T Consensus 274 ~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 336 (451)
T 1pw4_A 274 WSPTYLKEVKHFA------LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA-----------TGVFFMTLVTIATI 336 (451)
T ss_dssp HHHHHBTTBSCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHH-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh-----------HHHHHHHHHHHHHH
Confidence 1111111111111 11123334445566666677777777766 55442 333333333 3333
Q ss_pred HHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHHHHHHHH-HHHHHHHHH
Q 007582 406 VAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFTYLSLSF-GYFLSSAFV 484 (597)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~l-~~~i~~~~~ 484 (597)
+..+. ...+.+.+....++.+++.....+..+.++.+.+|++.|++++++.+....+ ++.+++.+.
T Consensus 337 ~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 403 (451)
T 1pw4_A 337 VYWMN-------------PAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 403 (451)
T ss_dssp HTTSC-------------CTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-------------cccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 0123445555566777777777888889999999999999999999999999 999999998
Q ss_pred HHHhhhhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007582 485 DIINAVTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAA 535 (597)
Q Consensus 485 ~~i~~~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 535 (597)
+.+.+.. | +...|++.+++++++.++.++..+
T Consensus 404 g~l~~~~--------g-----------~~~~~~~~~~~~~~~~~~~~~~~~ 435 (451)
T 1pw4_A 404 GYTVDFF--------G-----------WDGGFMVMIGGSILAVILLIVVMI 435 (451)
T ss_dssp HHHHHSS--------C-----------SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc--------C-----------cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8775421 1 344577788887777776655543
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=227.23 Aligned_cols=359 Identities=9% Similarity=-0.005 Sum_probs=229.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHH
Q 007582 11 KGGFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (597)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~ 90 (597)
++.++.+..++...++..+..+ +...+.+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~ 99 (438)
T 3o7q_A 22 RSYIIPFALLCSLFFLWAVANN-LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLF 99 (438)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHH-SCHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchHHHHHHHH
Confidence 3445555655566666655555 55555566788999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.+++..... ..+.+.++++|++.|+|.|...+...++++|.+|+++ |++.+++
T Consensus 100 ~~~~~~~~~~~~~~----------------~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 157 (438)
T 3o7q_A 100 LYALGAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNL 157 (438)
T ss_dssp HHHHHHHHHHHHHH----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTT------HHHHHHH
T ss_pred HHHHHHHHHHhccc----------------cccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchh------HHHHHHH
Confidence 99999998843221 1257789999999999999999999999999999777 9999999
Q ss_pred HHHHHHHHHHHHhhhheeee-cccc-------------------------hhHHHHHHHHHHHHHHHHHHhhccceeecC
Q 007582 171 YLLATTVAAVIGVTGIVYVF-TEKS-------------------------WWLGFLVSSVANFIGLIALAAGKCLYRIQQ 224 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~-~~~~-------------------------w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 224 (597)
++...++|..+++.+++++. ...+ ||+.|++.+.+.++..++++.... ++.+
T Consensus 158 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~--p~~~ 235 (438)
T 3o7q_A 158 AQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF--PALQ 235 (438)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcC--Cccc
Confidence 99999999999999998887 4444 999997766655444443332111 0000
Q ss_pred CCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhH
Q 007582 225 PGESPLVRVAQVLVVAIKNRKLSLPDNPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVE 304 (597)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (597)
++.+ ..+... .....+.+ .+++
T Consensus 236 ~~~~-------------------~~~~~~-------------------~~~~~~~~----------------~~~~---- 257 (438)
T 3o7q_A 236 SDNH-------------------SDAKQG-------------------SFSASLSR----------------LARI---- 257 (438)
T ss_dssp TTCC-------------------CCSSTT-------------------SHHHHHHH----------------HTTC----
T ss_pred cccc-------------------cccccc-------------------chhhhHHH----------------HHhC----
Confidence 0000 000000 00000000 0000
Q ss_pred HHHHHHhHhhHHHHHHHhHhhhcccchhH-HhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCC
Q 007582 305 EVKILTRMMPILASTILMNTCLAQLQTFS-ITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGH 383 (597)
Q Consensus 305 ~~~~~~~~~~l~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~ 383 (597)
+++...................+...+ ..+..+.+.. ..+.......+..++..++..++.|+++||+.
T Consensus 258 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-- 327 (438)
T 3o7q_A 258 --RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAG------FAANYLTGTMVCFFIGRFTGTWLISRFAPHKV-- 327 (438)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH--
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchh------HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--
Confidence 111111111111111111111111222 2221122211 12233334455556666677777777676653
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhh
Q 007582 384 PSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKT 463 (597)
Q Consensus 384 ~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~ 463 (597)
+.++.+++++++++..+. .+. +.+..+++.+++.....+..+.+..+.+|++ ++
T Consensus 328 ---------~~~~~~~~~~~~~~~~~~---------------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 381 (438)
T 3o7q_A 328 ---------LAAYALIAMALCLISAFA---------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TK 381 (438)
T ss_dssp ---------HHHHHHHHHHHHHHHHHC---------------CHH-HHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HH
T ss_pred ---------HHHHHHHHHHHHHHHHHc---------------CCc-HHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cc
Confidence 445555555555444332 111 2333446677777788889999999999977 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007582 464 LASSFTYLSLSFGYFLSSAFVDIINAV 490 (597)
Q Consensus 464 ~~~~~~~~~~~l~~~i~~~~~~~i~~~ 490 (597)
.+.++.. .+.+++.+++.+.+.+.+.
T Consensus 382 ~~~~~~~-~~~~g~~~~~~~~g~l~~~ 407 (438)
T 3o7q_A 382 YGSSFIV-MTIIGGGIVTPVMGFVSDA 407 (438)
T ss_dssp HHHHHHH-HTTHHHHHHHHHHHHHHHH
T ss_pred chhhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999887 6779999999888877654
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=209.12 Aligned_cols=167 Identities=11% Similarity=0.066 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~ 97 (597)
+.++...++..+......+.++. +.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 80 (375)
T 2gfp_A 3 LMLVLLVAVGQMAQTIYIPAIAD-MARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDR-VGRRPVILVGMSIFMLATL 80 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTT-SCCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHH
Confidence 34556666666666655555544 567899999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHHH
Q 007582 98 MLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATTV 177 (597)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (597)
+...++ +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++++...++
T Consensus 81 ~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 135 (375)
T 2gfp_A 81 VAVTTS-------------------SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQ------LRHANSLLNMGILV 135 (375)
T ss_dssp HHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS------CCSHHHHHHHHHHH
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHH------HHHHHHHHHHHHHH
Confidence 988876 56689999999999999999999999999999766 99999999999999
Q ss_pred HHHHHhhhheeeecccchhHHHHHHHHHHHHHHH
Q 007582 178 AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLI 211 (597)
Q Consensus 178 g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~ 211 (597)
|..++|.+++++.+..+||+.|++.+++.++..+
T Consensus 136 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 169 (375)
T 2gfp_A 136 SPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTF 169 (375)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9999999999998888999999887766554443
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=207.27 Aligned_cols=396 Identities=9% Similarity=-0.018 Sum_probs=220.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ 93 (597)
.|..+.+....++..+++..+.++++.|+++++|++..+.+++.+.+.++..++.+++|+++|| +|||++++++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr-~Grr~~l~~~~~~~~ 84 (417)
T 2cfq_A 6 NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDK-LGLRKYLLWIITGML 84 (417)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTT-STTCCHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHH
Confidence 3556667777777777888889999999999999999999999999999999999999999999 899999999988776
Q ss_pred HHHHHH---HHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 94 LALVML---TIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 94 ig~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
++.... ..+... ...++.++++.+++.|...+...+...+..++. .++++..++.
T Consensus 85 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~g~ 142 (417)
T 2cfq_A 85 VMFAPFFIFIFGPLL------------------QYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKV----SRRSNFEFGR 142 (417)
T ss_dssp SCHHHHHHHTHHHHH------------------HTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHH----HHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh----hhhcccchHH
Confidence 543221 121100 001344566666666555444444444443211 1225666777
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCC
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPD 250 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (597)
.+...++|..++|.+++++.+ .+|+..|++.++..++..++.+...|+ +++..+ ..+..+
T Consensus 143 ~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~ 202 (417)
T 2cfq_A 143 ARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTD----APSSAT---------------VANAVG 202 (417)
T ss_dssp HSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCC----CSCSSC---------------SSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCcc----cccccc---------------cccccc
Confidence 777788999999999888765 589998887655433332222111110 000000 000000
Q ss_pred CchhhhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccc
Q 007582 251 NPEELYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQ 330 (597)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (597)
. ..++.+..+. .+.++ + ++..............+..+.+..
T Consensus 203 -----------------~---~~~~~~~~~~-------------~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~ 243 (417)
T 2cfq_A 203 -----------------A---NHSAFSLKLA-------------LELFR-----Q-PKLWFLSLYVIGVSCTYDVFDQQF 243 (417)
T ss_dssp -----------------S---CCCCCCHHHH-------------HHHTT-----C-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------c---ccccccHHHH-------------HHHhc-----C-CchhhHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000000 00011 1 111111111111111111111111
Q ss_pred hhHHhhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007582 331 TFSITQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLV 410 (597)
Q Consensus 331 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~ 410 (597)
..+.... .... +......+....++.+..++..++..++.|+++||+. +.++.++++++++..++.
T Consensus 244 ~~~~~~~--~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------l~~~~~~~~~~~~~~~~~ 309 (417)
T 2cfq_A 244 ANFFTSF--FATG-EQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNA-----------LLLAGTIMSVRIIGSSFA 309 (417)
T ss_dssp HHHHHHT--SSSH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-----------HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHH--Hhcc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHH-----------HHHHHHHHHHHHHHHHHh
Confidence 1111110 1100 0000001222233344445556667777777777753 344555555543333211
Q ss_pred HHHHhhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHH-HHHHHHHHHHHHHHHHHHhh
Q 007582 411 EVIRRNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFT-YLSLSFGYFLSSAFVDIINA 489 (597)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~-~~~~~l~~~i~~~~~~~i~~ 489 (597)
.+.+.++...++.+++.....+..+.++.|.+|.+.|+.+.++. +..+++++.+++.+.+.+.+
T Consensus 310 ---------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~ 374 (417)
T 2cfq_A 310 ---------------TSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYE 374 (417)
T ss_dssp ---------------CSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHH
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHH
Confidence 12233334444455555566667788999999999999999984 77888999999998886643
Q ss_pred hhcccCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007582 490 VTKRITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWYKY 539 (597)
Q Consensus 490 ~~~~~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 539 (597)
. .++...|.+.+++++++.++.+++.+|++.
T Consensus 375 ~-------------------~g~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 405 (417)
T 2cfq_A 375 S-------------------IGFQGAYLVLGLVALGFTLISVFTLSGPGP 405 (417)
T ss_dssp H-------------------SHHHHHHHHHHHHHHHHHHHHTTSSCCSCT
T ss_pred h-------------------cCcHHHHHHHHHHHHHHHHHHHhhhcCCCc
Confidence 1 123445778888888877776665655433
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.7e-12 Score=133.99 Aligned_cols=178 Identities=14% Similarity=0.065 Sum_probs=150.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhcc--chhHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFL--SRFATCLIFGTL 91 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~--Gr~~~i~~~~~~ 91 (597)
.|.++..+...++..+.++++..+++.|+++.+|++..+.+.+.+.+.++..++.++.|++.|| + |||+.+.++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~ 329 (451)
T 1pw4_A 251 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMT 329 (451)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHHH
Confidence 3677788888889999999999999999999999999999999999999999999999999999 8 999998888877
Q ss_pred HH-HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 92 EV-LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 92 ~~-ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
.. ++.++..... ..+.+.+.+..++.|++.+...+....++.|.+|++. |++.+++
T Consensus 330 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 386 (451)
T 1pw4_A 330 LVTIATIVYWMNP-----------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGF 386 (451)
T ss_dssp HHHHHHHHTTSCC-----------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------HHHHHHH
T ss_pred HHHHHHHHHHHhc-----------------ccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhh------hhhHHHH
Confidence 66 5555444332 1245667778888999999998888999999999766 9999999
Q ss_pred HHHHHHH-HHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 171 YLLATTV-AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 171 ~~~~~~~-g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
++...++ |..++|.+.+++.+..+|+..|++.+++.+++.++.+.
T Consensus 387 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 432 (451)
T 1pw4_A 387 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 432 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999999988889999998887776666555443
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=9.5e-11 Score=123.47 Aligned_cols=168 Identities=11% Similarity=0.021 Sum_probs=136.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhHHHH-cccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 14 FRACTFVFVFSALENMGFIANGISMVLY-FKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~~~~~~y-l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.|.++..+...++.....+++..+++.| +++.+|++..+++.+.+.+.++..++.+++|+++|| +|||+++.++.++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~ 335 (438)
T 3o7q_A 257 IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIA 335 (438)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHH
Confidence 3566777777788888888999999999 888899999999999999999999999999999999 89999999999888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.++.++..... +.. .+...++.|++.+...+...++..|.+|++ ++...++..
T Consensus 336 ~~~~~~~~~~~-------------------~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 388 (438)
T 3o7q_A 336 MALCLISAFAG-------------------GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIV 388 (438)
T ss_dssp HHHHHHHHHCC-------------------HHH-HHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-------HHHHHHHHH
T ss_pred HHHHHHHHHcC-------------------CcH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------ccchhhHHH
Confidence 88877766653 222 234447889999999999999999998832 455555544
Q ss_pred HHHHHHHHHHhhhheeeecccc-hhHHHHHHHHHHHHHH
Q 007582 173 LATTVAAVIGVTGIVYVFTEKS-WWLGFLVSSVANFIGL 210 (597)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~~~~~-w~~~f~i~~~~~~~~~ 210 (597)
...+|..++|.+.+++.+..| ++..|.+.+++.++..
T Consensus 389 -~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 426 (438)
T 3o7q_A 389 -MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_dssp -HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 556999999999999988888 8988887665544443
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=7.1e-11 Score=124.13 Aligned_cols=174 Identities=9% Similarity=-0.040 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCC---chhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHF---DLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~---~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
.++..+...++....++.....++.|+.+.++. +....+...++..++..++.+++|+++|| +|||+++.++.++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~l~~~~~~~ 299 (417)
T 2cfq_A 221 KLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINR-IGGKNALLLAGTIM 299 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHH
Confidence 344444444444445555556677787666553 23445666666777788889999999999 89999999888877
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH-H
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF-Y 171 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~-~ 171 (597)
.++.++.+... +...+++..++.+++.+...+....+.+|.+|++. |++.+++ +
T Consensus 300 ~~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 354 (417)
T 2cfq_A 300 SVRIIGSSFAT-------------------SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCF 354 (417)
T ss_dssp HHHHHHHTTCC-------------------SHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHH------HHHHHHHHH
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHH
Confidence 77665554332 34456666677777777777777889999999544 8888888 4
Q ss_pred HHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHh
Q 007582 172 LLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAA 215 (597)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~ 215 (597)
+....+|..++|.+++++.+..++...|.+.+++.+++.++.+.
T Consensus 355 ~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 398 (417)
T 2cfq_A 355 CFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVF 398 (417)
T ss_dssp TTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh
Confidence 67778999999999998887778888888877776666554433
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.2e-10 Score=119.83 Aligned_cols=185 Identities=9% Similarity=-0.052 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHH-----HHHH
Q 007582 16 ACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCL-----IFGT 90 (597)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~-----~~~~ 90 (597)
..+.+....++....++.....++.|+.+.++.+..+.+.+.+...++..++.++.|++.|| +|||+... ++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r-~~~r~~~~~~~~~~~~~ 362 (491)
T 4aps_A 284 SYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTA-WKKNQPSSPTKFAVGLM 362 (491)
T ss_dssp THHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHH-TTTC---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHH-HhccCCCchHHHHHHHH
Confidence 34445555666666777777888889988888876778888888888999999999999999 89986655 6777
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHH
Q 007582 91 LEVLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNF 170 (597)
Q Consensus 91 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~ 170 (597)
+..++.++.......... +...+.+.+.+..++.|+|.+...+...+++.|.+|++. |++..++
T Consensus 363 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~ 426 (491)
T 4aps_A 363 FAGLSFLLMAIPGALYGT----------SGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAF------NSQMMSM 426 (491)
T ss_dssp HHHHHHTTTHHHHHHCCC----------CTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTC------SSSSTHH
T ss_pred HHHHHHHHHHHHHHhcCC----------CCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHHHHHH
Confidence 777776666554311000 001245567788889999999999999999999999877 9999999
Q ss_pred HHHHHHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 171 YLLATTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
++...++|..+++.+.+++.+ .++...|.+.+.+.+++.++.+...+
T Consensus 427 ~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (491)
T 4aps_A 427 WFLSSSVGSALNAQLVTLYNA-KSEVAYFSYFGLGSVVLGIVLVFLSK 473 (491)
T ss_dssp HHHHHHHHHHHHHHHGGGGGG-SSTTHHHHHTHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888765 35666777766665555555544433
|
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.3e-08 Score=106.88 Aligned_cols=182 Identities=8% Similarity=-0.069 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 007582 17 CTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (597)
Q Consensus 17 ~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~ 96 (597)
........++..+..+.......+++.+..+.+............+...++.++++++.|| +|||+.++.+.....++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr-~Grr~~~~~~~~~~~~~~ 356 (491)
T 4gc0_A 278 IVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGM 356 (491)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHh-hcCcchhccchHHHHHHH
Confidence 3333343444333333333444455566677777777777777788888999999999999 899999999998888877
Q ss_pred HHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHHHH
Q 007582 97 VMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLATT 176 (597)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (597)
+..+....... ...........+..+++. ...+....+.+|++|++. |++.+++.+...+
T Consensus 357 ~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~fPt~~------R~~~~g~~~~~~~ 416 (491)
T 4gc0_A 357 FSLGTAFYTQA-------------PGIVALLSMLFYVAAFAM-SWGPVCWVLLSEIFPNAI------RGKALAIAVAAQW 416 (491)
T ss_dssp HHHHHHHHTTC-------------CHHHHHHHHHHHHHHHHT-TTTHHHHHHHHHSSCTTT------HHHHHHHHHHHHH
T ss_pred HHHHHHHhccc-------------chHHHHHHHHHHHHHHHh-HHHHHHHHHHHHhCCHhH------HHHHHHHHHHHHH
Confidence 76665432111 111222222222333333 345667789999999887 9999999998899
Q ss_pred HHHHHHhhhheeeec------ccchhHHHHHHHHHHHHHHHHHHhhccc
Q 007582 177 VAAVIGVTGIVYVFT------EKSWWLGFLVSSVANFIGLIALAAGKCL 219 (597)
Q Consensus 177 ~g~~~~~~~~~~~~~------~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 219 (597)
+|+.+++.+.+.+.+ ..++...|++.+.+.+++.++.++..||
T Consensus 417 ~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PE 465 (491)
T 4gc0_A 417 LANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 465 (491)
T ss_dssp HHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecC
Confidence 999888877655532 2345567777666666666655555553
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-09 Score=110.80 Aligned_cols=163 Identities=10% Similarity=-0.053 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHH-HH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTL-EV 93 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~-~~ 93 (597)
|.++......++.....+++..+++.|+++.+|.+..+.+.+.+...++..++.++.|++.|| +||+ +.++..+ ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~~~~--~~~~~~~~~~ 275 (375)
T 2gfp_A 199 SGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTL--MWQSVICCLL 275 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTH-HHHH--HHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHH
Confidence 556677777888888888999999999998899999999999999999999999999999999 7882 3333333 22
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHH
Q 007582 94 LALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLL 173 (597)
Q Consensus 94 ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~ 173 (597)
.+..+...... + ..+.+.+++..++.|++.+...+...++..|.+| ++ |++..++.+.
T Consensus 276 ~~~~~~~~~~~-~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~------~g~~~g~~~~ 333 (375)
T 2gfp_A 276 AGLLMWIPDWF-G--------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FL------AGTAGALVGG 333 (375)
T ss_dssp TSSSSSHHHHH-H--------------HHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HH------HHHHHHHHHH
T ss_pred HHHHHHHHhhh-c--------------cccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cc------cchHHHHHHH
Confidence 33222111110 0 1145567778889999999999999999999987 43 8999999999
Q ss_pred HHHHHHHHHhhhheeeecccchhHHHHHH
Q 007582 174 ATTVAAVIGVTGIVYVFTEKSWWLGFLVS 202 (597)
Q Consensus 174 ~~~~g~~~~~~~~~~~~~~~~w~~~f~i~ 202 (597)
..++|..+++.+.+.+.+..+|+..+.+.
T Consensus 334 ~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 362 (375)
T 2gfp_A 334 LQNIGSGVLASLSAMLPQTGQGSLGLLMT 362 (375)
T ss_dssp HHHHHHHCCSTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 99999999999988887766777666553
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=86.71 Aligned_cols=135 Identities=12% Similarity=0.084 Sum_probs=91.9
Q ss_pred ccchhhHHHHHHHHhhhhhHHHh-hhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccchHHHHH
Q 007582 354 IPVIPLLFMSILLPLYEFFFVPF-ARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIRRNAFNETPPKQISLFWLS 432 (597)
Q Consensus 354 ~~~~~~i~~i~~~~l~~~~~~~~-~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 432 (597)
+.....+...+..++..++.|++ +||+. +.++.++.+++.++..+. +.+.+.++
T Consensus 59 ~~~~~~~~~~~~~~~~G~l~dr~~g~r~~-----------~~~~~~~~~~~~~~~~~~--------------~~~~~~~~ 113 (524)
T 2xut_A 59 VFHSFVIGVYFFPLLGGWIADRFFGKYNT-----------ILWLSLIYCVGHAFLAIF--------------EHSVQGFY 113 (524)
T ss_dssp HHHHHHHHHHHTHHHHHHHHTTSSCSHHH-----------HHHHHHHHHHHHHHHHHT--------------SSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHH-----------HHHHHHHHHHHHHHHHHh--------------cccHHHHH
Confidence 33445566666777788887777 77654 556666666666555432 11455666
Q ss_pred HHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHH---HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccCCCCCC
Q 007582 433 FQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSF---TYLSLSFGYFLSSAFVDIINAVTKRITPSKQGWLHGKDINK 509 (597)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~---~~~~~~l~~~i~~~~~~~i~~~~~~~~~~~~gw~~~~~~~~ 509 (597)
...++.+++.+...+....++.+.+|++.|++..++ ......+|..+++.+.+.+.+. .||
T Consensus 114 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~g~-------- 177 (524)
T 2xut_A 114 TGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKN--------FGA-------- 177 (524)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHT--------SCH--------
T ss_pred HHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------ccH--------
Confidence 777888999999999999999999999999887777 7777777777777766554321 123
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 007582 510 NNVNLFYWFLAIVSVLNLVLYLY 532 (597)
Q Consensus 510 ~~~~~~f~~~~~~~~~~~v~~~~ 532 (597)
.+.|++.+++.++..++.++
T Consensus 178 ---~~~f~~~~~~~~~~~~~~~~ 197 (524)
T 2xut_A 178 ---AVAFGIPGVLMFVATVFFWL 197 (524)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHS
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 34577666666655554433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 597 | |||
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.93 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.89 | |
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.22 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.13 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=3e-25 Score=232.82 Aligned_cols=178 Identities=11% Similarity=0.037 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHH---HhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 18 TFVFVFSALENMGFI---ANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 18 ~~~~~~~~~~~~~~~---~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|.++...++..+..| ...+.+.+++. ++|++.++.+++.+++.++..++.+++|+++|| +|||+++.++.++..+
T Consensus 24 w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~ 101 (447)
T d1pw4a_ 24 WQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAA 101 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 333333344334443 24556667876 479999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++++.+.... .+...+++.|++.|++.|...+...++++|.+|+++ |++.+++++.+
T Consensus 102 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~ 160 (447)
T d1pw4a_ 102 VMLFMGFVPWAT---------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA 160 (447)
T ss_dssp HHHHHHHCHHHH---------------SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHHHHHHH
T ss_pred HHhhccccchhh---------------hhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhc------ccccccccccc
Confidence 999888765332 145689999999999999999999999999999665 99999999999
Q ss_pred HHHHHHHHhhhheeeec-ccchhHHHHHHHHHHHHHHHHHHhhcc
Q 007582 175 TTVAAVIGVTGIVYVFT-EKSWWLGFLVSSVANFIGLIALAAGKC 218 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~-~~~w~~~f~i~~~~~~~~~~~~~~~~~ 218 (597)
.++|..+++.+++.+.. ..+||+.|++...+.++..++.+...+
T Consensus 161 ~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 205 (447)
T d1pw4a_ 161 HNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR 205 (447)
T ss_dssp HHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred cchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcc
Confidence 99999999988776544 357999988877776555555544433
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=1.6e-22 Score=207.94 Aligned_cols=396 Identities=9% Similarity=-0.030 Sum_probs=232.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHH
Q 007582 15 RACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (597)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~i 94 (597)
|++|.+....++..++...+.++++.|+++++|.+.++.|++.+++.++..++.++.|+++|| +||||+++++..+..+
T Consensus 7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~~~ 85 (417)
T d1pv7a_ 7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDK-LGLRKYLLWIITGMLV 85 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH-HTTCTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH
Confidence 677888888888888888888999999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHHHH
Q 007582 95 ALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYLLA 174 (597)
Q Consensus 95 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~ 174 (597)
+.++.......+. .....+..+.+.+.+.+...........+..++ ...++.+..+.....
T Consensus 86 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 146 (417)
T d1pv7a_ 86 MFAPFFIFIFGPL---------------LQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEK----VSRRSNFEFGRARMF 146 (417)
T ss_dssp THHHHHHHTHHHH---------------HHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHH----HHHHHSCCHHHHHHH
T ss_pred HHHHHHHhhhhhh---------------HHHHHHHHHHHhhhcccccccchhhcccccccc----hhhhhHHHHHHHhhh
Confidence 8888777653221 122334555555555555554444444433321 122355566666777
Q ss_pred HHHHHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHHhhccceeecCCCCChhHHHHHHHHHHHHhcCCCCCCCchh
Q 007582 175 TTVAAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALAAGKCLYRIQQPGESPLVRVAQVLVVAIKNRKLSLPDNPEE 254 (597)
Q Consensus 175 ~~~g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (597)
...+..+++.+++.+.+. +|+..+.+......+..++.+...++.+..+++.++. ...+...
T Consensus 147 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---- 208 (417)
T d1pv7a_ 147 GCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAV-------------GANHSAF---- 208 (417)
T ss_dssp HHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHH-------------HSCCCCC----
T ss_pred hccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcccccchhhhhhh-------------hhhcccc----
Confidence 788888888888777554 5555555555444444444443332211111100000 0000000
Q ss_pred hhhhhhhhhcccccccCCCCccchhhhcccCCCCCCCCCCccccccchhHHHHHHHhHhhHHHHHHHhHhhhcccchhHH
Q 007582 255 LYEINEKERASTWERIPHANQFRCLDKAAIMPKDSAVAAPWRVCTVTQVEEVKILTRMMPILASTILMNTCLAQLQTFSI 334 (597)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~ 334 (597)
...+.... +.. ...+........ .... ..........+.
T Consensus 209 ----------------------~~~~~~~~-------------~~~---~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~ 247 (417)
T d1pv7a_ 209 ----------------------SLKLALEL-------------FRQ---PKLWFLSLYVIG--VSCT-YDVFDQQFANFF 247 (417)
T ss_dssp ----------------------CHHHHHHH-------------TTS---SHHHHHHHHHHH--HHHH-HHHHHHHHHHHH
T ss_pred ----------------------cccccccc-------------ccc---ccccchhhhhHH--HHHH-HHhhhccccccc
Confidence 00000000 000 000111111000 0000 000000000000
Q ss_pred hhhhhcCCCCCcccccCCcccchhhHHHHHHHHhhhhhHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007582 335 TQGAAMDPHLGSIKVPTSSIPVIPLLFMSILLPLYEFFFVPFARKITGHPSGITQLQRVGIGLVLSAVSMTVAGLVEVIR 414 (597)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~~ 414 (597)
. .....................+...+...+.+++.|+.++|+. +.++.++++++.+...+.
T Consensus 248 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~-----------~~~~~~~~~~~~~~~~~~---- 309 (417)
T d1pv7a_ 248 T---SFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNA-----------LLLAGTIMSVRIIGSSFA---- 309 (417)
T ss_dssp T---TSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHH-----------HHHHHHHHHHHHHHHHTC----
T ss_pred c---ccccccccchhhhcccccccccccccchhhhhhhhcccccccc-----------hhhhHHHHHHhhhccccc----
Confidence 0 0000000000011122233445555566667777666665543 455555555555544332
Q ss_pred hhcccCCCCccchHHHHHHHHHHHHHHHHHHhhhHHHhhhhccCcchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcc
Q 007582 415 RNAFNETPPKQISLFWLSFQYCIFGIADMFTFIGLLEFFYKEAPAGMKTLASSFT-YLSLSFGYFLSSAFVDIINAVTKR 493 (597)
Q Consensus 415 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~-~~~~~l~~~i~~~~~~~i~~~~~~ 493 (597)
.+.+.++...++.+++.....+....++.|.+|++.|+.+.++. ++...++..+++.+.+.+.+..
T Consensus 310 -----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~-- 376 (417)
T d1pv7a_ 310 -----------TSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI-- 376 (417)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH--
T ss_pred -----------cccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 34556666777888999999999999999999999999999985 5667789999988888775432
Q ss_pred cCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007582 494 ITPSKQGWLHGKDINKNNVNLFYWFLAIVSVLNLVLYLYAAAWY 537 (597)
Q Consensus 494 ~~~~~~gw~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 537 (597)
++...|+++++++++..++.+++.++.
T Consensus 377 -----------------g~~~~~~~~~~~~~~~~~~~~~~l~~~ 403 (417)
T d1pv7a_ 377 -----------------GFQGAYLVLGLVALGFTLISVFTLSGP 403 (417)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred -----------------CHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 234568888888888877777766543
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=3.7e-11 Score=123.97 Aligned_cols=181 Identities=13% Similarity=0.019 Sum_probs=141.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHH
Q 007582 13 GFRACTFVFVFSALENMGFIANGISMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (597)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~ 92 (597)
..+.++.+....++.....+++..+.+.|+.+.++.+..+.+.....+.++..++.+++|++.|| ++|++.........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 325 (447)
T d1pw4a_ 247 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFM 325 (447)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTTCHHHHHHHHH
T ss_pred cCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhh-ccccccccccchhH
Confidence 35677788888888889999999999999999999999999999999999999999999999999 78876555444443
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH
Q 007582 93 VLALVMLTIQAYSKNLHPPDCGKSSCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL 172 (597)
Q Consensus 93 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~ 172 (597)
.+..+........+ ..+.....+..++.|++.++..+....+..|.+|++. |++..++.+
T Consensus 326 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 385 (447)
T d1pw4a_ 326 TLVTIATIVYWMNP--------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 385 (447)
T ss_dssp HHHHHHHHHTTSCC--------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------HHHHHHHHH
T ss_pred HHHHHHHHHHHhcc--------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 33333222221111 2355667777788899999999999999999999665 899999988
Q ss_pred HHHHH-HHHHHhhhheeeecccchhHHHHHHHHHHHHHHHHHH
Q 007582 173 LATTV-AAVIGVTGIVYVFTEKSWWLGFLVSSVANFIGLIALA 214 (597)
Q Consensus 173 ~~~~~-g~~~~~~~~~~~~~~~~w~~~f~i~~~~~~~~~~~~~ 214 (597)
...++ |..++|.+.+++.+..||+..|.+...+.+++.+++.
T Consensus 386 ~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 428 (447)
T d1pw4a_ 386 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 428 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 77776 5677888999998889999888877666555544433
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=4.3e-11 Score=121.14 Aligned_cols=154 Identities=10% Similarity=-0.062 Sum_probs=125.2
Q ss_pred hHHHHcccccCCchhhHHHHHHHHHHHHHhHhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 007582 37 SMVLYFKNEMHFDLAGASNTLTNFFGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMLTIQAYSKNLHPPDCGKS 116 (597)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l~D~~~Gr~~~i~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 116 (597)
....+..+..+.+....+.......++..++.++.+++.|| +|||+++.++.++..++.++....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~------------- 310 (417)
T d1pv7a_ 245 NFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINR-IGGKNALLLAGTIMSVRIIGSSFAT------------- 310 (417)
T ss_dssp HHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTCC-------------
T ss_pred ccccccccccccchhhhcccccccccccccchhhhhhhhcc-cccccchhhhHHHHHHhhhcccccc-------------
Confidence 33334444455566677788888889999999999999999 8999999999999888887777654
Q ss_pred CcCCchhHHHHHHHHHHHHhccccCcccchhhhcccCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeeecccch
Q 007582 117 SCLKGAIAAYFYGSLYLYSFGCGGNRGTLPAFGAGQFDENDPKGAKALASYFNFYL-LATTVAAVIGVTGIVYVFTEKSW 195 (597)
Q Consensus 117 ~~~~~~~~~~~~~~r~l~g~g~g~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~w 195 (597)
+.+.+++..++.|++.+...+...+++.|.+|++. |++.++..+ ....+|..++|.+.|++.+..|+
T Consensus 311 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~ 378 (417)
T d1pv7a_ 311 ------SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGF 378 (417)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCH
T ss_pred ------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Confidence 45677888889999999999999999999999666 899999754 56779999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 007582 196 WLGFLVSSVANFIGLIALAAG 216 (597)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~ 216 (597)
+..|++.+++.++..++.++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T d1pv7a_ 379 QGAYLVLGLVALGFTLISVFT 399 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999988777766555554443
|