Citrus Sinensis ID: 007595

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------
MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
cccccccccHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccEEccccccccccccccccccccccccHHHHccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHccccEEEEEEcccccccccccccccHHHHHHcccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHcccccEEEEEccccccccccHHHHHccccEEEEHHHHHHHHHccccccccccccEEccccccccccccccHHHHHccccccEEEcccHHHccccccccccccccccccccccccccEEEEEccccccccccccEEEEEEEccccccccccccccccccEEEccccccccEEEEEccccc
ccccHHEccHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHEEEEEEEEccccHHcccccccccccHHHHHHccHHHHHccccHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHccEEEEcccHHEccccccccccEEEEcccEEEEEEEccccccccccccccEEEEEEccccccccccEEEHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccEEccHHHHHHHHcccEEEEEEEcccEEEccccccccHHHHHHcccccccccccccccccccccEEEEEEcccccccccEEEccccHHHHHHHcHHHEccccccEEEEEccEEEEcccEEEEcccccccEEEEEccccccHHHHHHHHHcccEEEEccHHHHHHHHHccccccccHHHHEEEccccccccHHHHHHHHHHHccccEEEEEcEcccccEEEcccccccccccccccccccccEEEEccccccccccccccEEEEEEcccccHHHHHEcccHHHHEEcccccccccEcccccccc
mgknirevGVVDLVKVGLKVDEAEDFDNILKQLIdgskgldpkEIWKELVARkvfkpwhphglhqlLYYSVyndwdasingpplywfpsldqskltnlghameihgpkflgamykdpftsfslfqkftvEHPEAYWEIVLKEISVKfheapkcildrtdkskhggtwlpgsvlnvaeccllpssrlrkeddsVAVVWRedrcddssvnrmTYKELRERVMLVANALDTMFskgdaiaidmpMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKakgiftqdfilrggrkfplyskvaeagplkaVVLPvigddvgiqlrqqdvswkdflscvdyhpgpkyyppvyrpvdSVINILfssgttgepkaipwtqlspircaaeawghidmkvgdvycwptnlgwvmgPIILFSSFLSGAALALyhgsplersfgkfvqdsgvsvlgTVPSLVKAWkntnclqgldwtkirsfastgetsnvdddLWLASKAYYKpiieccggtelassyiqgsmlqpqafgafstatmTTGFVIldelgvpypddqpcvgevglfplylgatdrllnadheevyfsgmpiykgmvcvdlpfyy
mgknirevgvvdLVKVGLKVDEAEDFDNILKQlidgskgldpKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLpssrlrkeddsvavvwredrcddssvnrmtykelRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRlrvskakgiftqdfilrggRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKntnclqgldwTKIRSFAStgetsnvdddlWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEvyfsgmpiykgMVCVDLPFYY
MGKNIRevgvvdlvkvglkvdeAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
*****REVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFY*
*********VVDLVKVGLKVDEAEDFDNILKQLID**KGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
****IREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPFYY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query597 2.2.26 [Sep-21-2011]
Q84P17 727 Probable acyl-activating yes no 0.976 0.801 0.695 0.0
F4KBF3 721 Probable acyl-activating no no 0.964 0.798 0.476 1e-154
Q88EH6 653 Acetyl-coenzyme A synthet yes no 0.624 0.571 0.278 4e-28
Q8Z1R0 652 Acetyl-coenzyme A synthet N/A no 0.659 0.604 0.276 8e-27
Q8ZKF6 652 Acetyl-coenzyme A synthet yes no 0.659 0.604 0.273 2e-26
A8FUF1 650 Acetyl-coenzyme A synthet yes no 0.581 0.533 0.276 2e-26
A1JIK3 652 Acetyl-coenzyme A synthet yes no 0.671 0.615 0.276 3e-26
Q2NR28 652 Acetyl-coenzyme A synthet yes no 0.673 0.616 0.279 6e-26
Q885K7 651 Acetyl-coenzyme A synthet yes no 0.606 0.556 0.277 6e-26
Q4ZQG8 651 Acetyl-coenzyme A synthet yes no 0.616 0.565 0.275 8e-26
>sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 Back     alignment and function desciption
 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/587 (69%), Positives = 479/587 (81%), Gaps = 4/587 (0%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
           M K+I E+   D VK GL +++A++FD ++  +I  +   DP++ WK LV   V KPWHP
Sbjct: 1   MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
           H LHQLLYYSVY++WD+S++GPPLYWFPSL QSK TNLG  ME HGP+ LG  YK+P  S
Sbjct: 61  HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           F LF++F+VEHPE YW  V+ E+S+ FH  P+CIL+   KSK  GTWLP +VLN+AECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDM 240
           +PSS  +KEDDSVAVVWR +  DDS VNRMT KELRE+VMLVANA+   F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237

Query: 241 PMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297

Query: 301 SKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHP-GPKYYPPVYRPVDSVI 359
           S+V EA P K +VLP  G ++ +QLR+QDVSW DFLS    H  G  YY P+Y PV+SVI
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357

Query: 360 NILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSF 419
           NILFSSGTTGEPKAIPWTQLSPIR A + W H+D++VG  YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417

Query: 420 LSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST 479
           L+GA LALY GSPL R FGKFVQD+GV+VLGTVPSLVK WK TNC++GL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477

Query: 480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVIL 539
           GE SNVDD LWL+SKA YKP+IECCGGTELASSYI GS LQPQAFGAFST +MTT  +I 
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537

Query: 540 DELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYK 586
           DE GVPYPDDQPC GEVGLFP +LGATDRLLNA+H+EVYF GMP+YK
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYK 584
May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 Back     alignment and function description
>sp|Q88EH6|ACSA1_PSEPK Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1 Back     alignment and function description
>sp|Q8Z1R0|ACSA_SALTI Acetyl-coenzyme A synthetase OS=Salmonella typhi GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8ZKF6|ACSA_SALTY Acetyl-coenzyme A synthetase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=acs PE=1 SV=1 Back     alignment and function description
>sp|A8FUF1|ACSA_SHESH Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A1JIK3|ACSA_YERE8 Acetyl-coenzyme A synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q2NR28|ACSA_SODGM Acetyl-coenzyme A synthetase OS=Sodalis glossinidius (strain morsitans) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q885K7|ACSA_PSESM Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q4ZQG8|ACSA_PSEU2 Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acsA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query597
225435726 727 PREDICTED: acetyl-coenzyme A synthetase 0.984 0.808 0.75 0.0
380042388 727 acyl-activating enzyme 14 [Cannabis sati 0.978 0.803 0.741 0.0
380042368 723 acyl-activating enzyme 4, partial [Canna 0.963 0.795 0.738 0.0
380042386 715 acyl-activating enzyme 13 [Cannabis sati 0.959 0.801 0.711 0.0
449503441 725 PREDICTED: probable acyl-activating enzy 0.981 0.808 0.670 0.0
449448832 725 PREDICTED: probable acyl-activating enzy 0.981 0.808 0.668 0.0
449503439 725 PREDICTED: probable acyl-activating enzy 0.981 0.808 0.675 0.0
449448834 725 PREDICTED: probable acyl-activating enzy 0.981 0.808 0.675 0.0
145336784 727 acyl-activating enzyme 18 [Arabidopsis t 0.976 0.801 0.695 0.0
12323178 2655 acetyl-CoA synthetase, putative; 45051-3 0.973 0.218 0.691 0.0
>gi|225435726|ref|XP_002285701.1| PREDICTED: acetyl-coenzyme A synthetase [Vitis vinifera] gi|297746451|emb|CBI16507.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/588 (75%), Positives = 514/588 (87%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
           MG  + EVGV +LVK GL ++EA++F+ ILK  + G++G DP E+W+E+VAR+V  P HP
Sbjct: 1   MGMRVAEVGVGELVKAGLSMEEAQEFERILKAAVGGARGSDPSEVWREVVARRVLSPSHP 60

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
           HGLH+L+++SVY +WD SI GPPLYWFPSL +S  TNLG  ME +GP+ LG  YKDP TS
Sbjct: 61  HGLHRLVFHSVYAEWDESIRGPPLYWFPSLYESMHTNLGRLMETYGPRLLGLSYKDPITS 120

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           +SLFQKF+V++ E YW +VLKE+SV FH AP+CILD TDKSKHGGTWLPG+VLN+AECCL
Sbjct: 121 YSLFQKFSVQNLEVYWSMVLKELSVLFHRAPRCILDTTDKSKHGGTWLPGAVLNIAECCL 180

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDM 240
           LP S  RK D+S+AVVWR++  DDS VNR+T KELRE+VM+VAN LD  FSKGDAIAIDM
Sbjct: 181 LPVSYPRKHDNSLAVVWRDEGNDDSPVNRLTLKELREQVMMVANVLDATFSKGDAIAIDM 240

Query: 241 PMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTVHAVIIYLAI+LAG+VVVSIADSFAA+EIATRL VSKAKGIFTQDFI+RGGRKFPLY
Sbjct: 241 PMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSKAKGIFTQDFIVRGGRKFPLY 300

Query: 301 SKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVIN 360
           S+V EA P K +VLP IG DV +QLR+QD+SWKDFLS  D+ P P  Y PVY+P+D+V N
Sbjct: 301 SRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHADHLPRPNNYSPVYQPIDAVTN 360

Query: 361 ILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFL 420
           ILFSSGTTG+PKAIPWTQ+SPIR +A+AW  I+++VGDV+CWPTNLGWVMGP IL++SFL
Sbjct: 361 ILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVFCWPTNLGWVMGPTILYASFL 420

Query: 421 SGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTG 480
           +GAALALYHGSPL+R FGKFVQD+GV+VLGTVPSLVK WKNT C++GLDWTKI+SFASTG
Sbjct: 421 TGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWKNTGCMEGLDWTKIKSFASTG 480

Query: 481 ETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD 540
           ETSNVDDDLWL+S+AYYKPIIECCGGTELASSYIQGS+LQPQAFG FSTA MTTGFVILD
Sbjct: 481 ETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQPQAFGTFSTAAMTTGFVILD 540

Query: 541 ELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGM 588
           E GVPYPDDQPCVGEVGLFPL +GATD LLNADHEEVYF GMP+YKGM
Sbjct: 541 ENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFKGMPMYKGM 588

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|380042388|gb|AFD33358.1| acyl-activating enzyme 14 [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042368|gb|AFD33348.1| acyl-activating enzyme 4, partial [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042386|gb|AFD33357.1| acyl-activating enzyme 13 [Cannabis sativa] Back     alignment and taxonomy information
>gi|449503441|ref|XP_004162004.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448832|ref|XP_004142169.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449503439|ref|XP_004162003.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448834|ref|XP_004142170.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|145336784|ref|NP_175929.3| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|75297963|sp|Q84P17.1|AEE18_ARATH RecName: Full=Probable acyl-activating enzyme 18, peroxisomal gi|29893268|gb|AAP03028.1| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|332195104|gb|AEE33225.1| acyl-activating enzyme 18 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12323178|gb|AAG51574.1|AC027034_20 acetyl-CoA synthetase, putative; 45051-31547 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query597
TAIR|locus:2035721 727 AAE18 "acyl-activating enzyme 0.939 0.771 0.706 4e-225
TAIR|locus:2178277 721 AAE17 "acyl-activating enzyme 0.917 0.760 0.494 4.5e-146
TIGR_CMR|BA_2553 646 BA_2553 "acetoacetyl-CoA synth 0.783 0.724 0.275 1.5e-35
DICTYBASE|DDB_G0277815 674 acsA "acetyl-CoA synthetase" [ 0.626 0.554 0.260 2.6e-26
TIGR_CMR|CPS_3955 648 CPS_3955 "acetyl-CoA synthetas 0.608 0.560 0.255 2.5e-24
UNIPROTKB|Q9KV59 649 acsA "Acetyl-coenzyme A synthe 0.758 0.697 0.254 2.5e-24
TIGR_CMR|VC_0298 649 VC_0298 "acetyl-CoA synthase" 0.758 0.697 0.254 2.5e-24
UNIPROTKB|P27550 652 acs [Escherichia coli K-12 (ta 0.659 0.604 0.273 2.5e-24
TIGR_CMR|SO_2743 650 SO_2743 "acetyl-coenzyme A syn 0.743 0.683 0.245 1.2e-23
RGD|1306246 682 Acss1 "acyl-CoA synthetase sho 0.619 0.542 0.263 6.2e-22
TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2173 (770.0 bits), Expect = 4.0e-225, P = 4.0e-225
 Identities = 399/565 (70%), Positives = 465/565 (82%)

Query:    23 AEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGP 82
             A++FD ++  +I  +   DP++ WK LV   V KPWHPH LHQLLYYSVY++WD+S++GP
Sbjct:    23 AKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHPHPLHQLLYYSVYSNWDSSVHGP 82

Query:    83 PLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKE 142
             PLYWFPSL QSK TNLG  ME HGP+ LG  YK+P  SF LF++F+VEHPE YW  V+ E
Sbjct:    83 PLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLESFELFRRFSVEHPEVYWSFVIDE 142

Query:   143 ISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRC 202
             +S+ FH  P+CIL+   KSK  GTWLP +VLN+AECCL+PSS  +KEDDSVAVVWR +  
Sbjct:   143 LSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCLMPSSHPKKEDDSVAVVWRNEGF 199

Query:   203 DDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVS 262
             DDS VNRMT KELRE+VMLVANA+   F KGD IAIDMPMTV AVIIYLAIILAG +VVS
Sbjct:   200 DDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDMPMTVDAVIIYLAIILAGCIVVS 259

Query:   263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVG 322
             IADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLYS+V EA P K +VLP  G ++ 
Sbjct:   260 IADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLYSRVVEAAPSKVIVLPASGTELH 319

Query:   323 IQLRQQDVSWKDFLSCVDYHP-GPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSP 381
             +QLR+QDVSW DFLS    H  G  YY P+Y PV+SVINILFSSGTTGEPKAIPWTQLSP
Sbjct:   320 VQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVINILFSSGTTGEPKAIPWTQLSP 379

Query:   382 IRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFV 441
             IR A + W H+D++VG  YCWPTNLGWVMGP ++FS FL+GA LALY GSPL R FGKFV
Sbjct:   380 IRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFV 439

Query:   442 QDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPII 501
             QD+GV+VLGTVPSLVK WK TNC++GL+WTKI+ FA+TGE SNVDD LWL+SKA YKP+I
Sbjct:   440 QDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVI 499

Query:   502 ECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPL 561
             ECCGGTELASSYI GS LQPQAFGAFST +MTT  +I DE GVPYPDDQPC GEVGLFP 
Sbjct:   500 ECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQ 559

Query:   562 YLGATDRLLNADHEEVYFSGMPIYK 586
             +LGATDRLLNA+H+EVYF GMP+YK
Sbjct:   560 HLGATDRLLNANHDEVYFKGMPMYK 584
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016874 "ligase activity" evidence=ISS
GO:0005777 "peroxisome" evidence=IDA
GO:0009850 "auxin metabolic process" evidence=IMP
TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277815 acsA "acetyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3955 CPS_3955 "acetyl-CoA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV59 acsA "Acetyl-coenzyme A synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0298 VC_0298 "acetyl-CoA synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
RGD|1306246 Acss1 "acyl-CoA synthetase short-chain family member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84P17AEE18_ARATH6, ., 2, ., 1, ., -0.69500.97650.8019yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query597
PLN03052 728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.0
PLN03051 499 PLN03051, PLN03051, acyl-activating enzyme; Provis 0.0
COG0365 528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 3e-51
cd05943 616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 2e-43
cd05968 474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 8e-42
PRK03584 655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 3e-40
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 3e-39
TIGR01217 652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 3e-32
COG0318 534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 9e-31
TIGR02188 625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 1e-27
cd05967 607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 6e-26
cd05966 602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-24
PRK00174 637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 6e-21
PRK07656 513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-20
TIGR02316 628 TIGR02316, propion_prpE, propionate--CoA ligase 4e-19
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 3e-17
PLN02654 666 PLN02654, PLN02654, acetate-CoA ligase 3e-17
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 2e-15
cd05904 504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 6e-15
cd04433 338 cd04433, AFD_class_I, Adenylate forming domain, Cl 2e-14
cd05909 489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 4e-14
COG1022 613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-13
PRK07638 487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 1e-13
cd12118 520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 1e-13
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 4e-13
PRK04319 570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 2e-11
PRK10524 629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 2e-11
cd05920 483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 3e-11
cd05903 437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 4e-11
PRK08316 523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 1e-10
cd12117 474 cd12117, A_NRPS_Srf_like, The adenylation domain o 1e-09
PRK06187 521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 8e-09
TIGR03098 517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 1e-08
PRK08276 502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 2e-08
cd12114 476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 2e-08
PLN02574 560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 2e-08
cd12119 517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 4e-08
PRK13295 547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 1e-07
PRK07529 632 PRK07529, PRK07529, AMP-binding domain protein; Va 1e-07
PRK06710 563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 2e-07
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 2e-07
cd05973 440 cd05973, MACS_like_2, Uncharacterized subfamily of 8e-07
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 2e-06
TIGR03208 538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 2e-06
PRK06087 547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-06
PRK07798 533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 3e-06
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 3e-06
PRK07786 542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 3e-06
PRK12583 558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 3e-06
PRK08314 546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-06
PLN02246 537 PLN02246, PLN02246, 4-coumarate--CoA ligase 6e-06
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 8e-06
PRK07059 557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 9e-06
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 3e-05
PRK05852 534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 3e-05
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 4e-05
cd05931 547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 4e-05
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 5e-05
cd05932 504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 6e-05
cd05958 487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 7e-05
cd05969 443 cd05969, MACS_like_4, Uncharacterized subfamily of 7e-05
PRK08180 614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 7e-05
cd05917 347 cd05917, FACL_like_2, Uncharacterized subfamily of 9e-05
PRK06839 496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 1e-04
PRK06178 567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-04
PRK08633 1146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 1e-04
PRK08008 517 PRK08008, caiC, putative crotonobetaine/carnitine- 1e-04
cd05918 447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 1e-04
PRK06334 539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 1e-04
cd05923 495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 2e-04
PRK03640 483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 2e-04
cd05928 530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 2e-04
PLN02330 546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 2e-04
PRK07788 549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 2e-04
PLN02430 660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 3e-04
cd05915 509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 3e-04
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 3e-04
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-04
cd05930 445 cd05930, A_NRPS, The adenylation domain of nonribo 4e-04
cd05959 506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4e-04
PTZ00237 647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 4e-04
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 5e-04
cd05970 537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 7e-04
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 0.001
PRK07514 504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 0.001
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.001
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 0.001
TIGR02262 508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 0.001
cd05919 436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 0.001
PRK08974 560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 0.002
PRK04813 503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 0.002
PRK12406 509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 0.002
PRK08315 559 PRK08315, PRK08315, AMP-binding domain protein; Va 0.002
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 0.003
PRK07867 529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 0.003
cd05927 539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 0.004
TIGR01734 502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 0.004
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 0.004
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information 
 Score = 1012 bits (2618), Expect = 0.0
 Identities = 350/590 (59%), Positives = 435/590 (73%), Gaps = 5/590 (0%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
            GK++ E+ V DL   GL  +EAE F   L+ ++  + G  P  IW+  +++ +  P HP
Sbjct: 4   AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRA-GASPPSIWRR-ISQSLLTPSHP 61

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
             LHQL+YYS Y +WD+   GPP  WFPS + +KLTNLG  +E  G + LG+ YKDP +S
Sbjct: 62  FALHQLMYYSCYKNWDSDTLGPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISS 121

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           FS FQ+F+VE+PE YW IVL E+S+ F   P+CILD +D+S  GG WLPG+VLNVAECCL
Sbjct: 122 FSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDESNPGGQWLPGAVLNVAECCL 181

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAID 239
            P     K DDS+A++WR++  DD  VNRMT  ELR +V  VANALD + F KGDAIAID
Sbjct: 182 TPKPS--KTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239

Query: 240 MPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
           MPM VHAVIIYLAIILAG VVVSIADSFA  EIATRL++SKAK IFTQD I+RGG+  PL
Sbjct: 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPL 299

Query: 300 YSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVI 359
           YS+V EA   KA+VLP  G  V ++LR+ D+SW DFL+  +    P  Y  V +PV++  
Sbjct: 300 YSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFT 359

Query: 360 NILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSF 419
           NILFSSGTTGEPKAIPWTQL+P+R AA+AW H+D++ GD+ CWPTNLGW+MGP ++++S 
Sbjct: 360 NILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASL 419

Query: 420 LSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST 479
           L+GA LALY+GSPL R F KFVQD+ V++LGTVPS+VK WKNTNC+ GLDW+ IR F ST
Sbjct: 420 LNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479

Query: 480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVIL 539
           GE S+VDD LWL S+A YKPIIE CGGTEL   ++ GS+LQPQAF AFST  M     IL
Sbjct: 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFIL 539

Query: 540 DELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMV 589
           D+ G PYPDD PC GE+ LFPL  GA+  LLNADH +VYF GMP++ G +
Sbjct: 540 DDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKI 589

Length = 728
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 597
PLN03052 728 acetate--CoA ligase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
COG0365 528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PTZ00237 647 acetyl-CoA synthetase; Provisional 100.0
PLN02654 666 acetate-CoA ligase 100.0
TIGR02188 625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
TIGR02316 628 propion_prpE propionate--CoA ligase. This family c 100.0
PRK03584 655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK00174 637 acetyl-CoA synthetase; Provisional 100.0
TIGR01217 652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK10524 629 prpE propionyl-CoA synthetase; Provisional 100.0
KOG1175 626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
KOG1176 537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN02614 666 long-chain acyl-CoA synthetase 100.0
COG0318 534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PRK04319 570 acetyl-CoA synthetase; Provisional 100.0
PRK06334 539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02736 651 long-chain acyl-CoA synthetase 100.0
KOG1177 596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PLN02861 660 long-chain-fatty-acid-CoA ligase 100.0
PTZ00342 746 acyl-CoA synthetase; Provisional 100.0
PLN02860 563 o-succinylbenzoate-CoA ligase 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK13295 547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK07529 632 AMP-binding domain protein; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
COG1022 613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PTZ00216 700 acyl-CoA synthetase; Provisional 100.0
PLN02246 537 4-coumarate--CoA ligase 100.0
PLN02574 560 4-coumarate--CoA ligase-like 100.0
PRK07638 487 acyl-CoA synthetase; Validated 100.0
PRK07656 513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05677 562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08180 614 feruloyl-CoA synthase; Reviewed 100.0
PLN02430 660 long-chain-fatty-acid-CoA ligase 100.0
PLN02387 696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK06839 496 acyl-CoA synthetase; Validated 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK06187 521 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098 515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK07786 542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640 483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PLN03051 499 acyl-activating enzyme; Provisional 100.0
PRK08315 559 AMP-binding domain protein; Validated 100.0
PRK09274 552 peptide synthase; Provisional 100.0
PRK07769 631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08314 546 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02262 508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PLN02330 546 4-coumarate--CoA ligase-like 1 100.0
KOG1256 691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK12583 558 acyl-CoA synthetase; Provisional 100.0
PRK06145 497 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06087 547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK12476 612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK12582 624 acyl-CoA synthetase; Provisional 100.0
PRK08316 523 acyl-CoA synthetase; Validated 100.0
PRK05857 540 acyl-CoA synthetase; Validated 100.0
PRK07470 528 acyl-CoA synthetase; Validated 100.0
COG1021 542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK07008 539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06155 542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK12492 562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK05605 573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07514 504 malonyl-CoA synthase; Validated 100.0
PRK05851 525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK09088 488 acyl-CoA synthetase; Validated 100.0
PRK05852 534 acyl-CoA synthetase; Validated 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK07059 557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01734 502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK10946 536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06018 542 putative acyl-CoA synthetase; Provisional 100.0
PRK06188 524 acyl-CoA synthetase; Validated 100.0
PRK08751 560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PLN03102 579 acyl-activating enzyme; Provisional 100.0
PRK04813 503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK05620 576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07787 471 acyl-CoA synthetase; Validated 100.0
PRK13390 501 acyl-CoA synthetase; Provisional 100.0
PRK06164 540 acyl-CoA synthetase; Validated 100.0
PRK08974 560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13388 540 acyl-CoA synthetase; Provisional 100.0
PRK06710 563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06178 567 acyl-CoA synthetase; Validated 100.0
PRK07798 533 acyl-CoA synthetase; Validated 100.0
PRK08279 600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK07867 529 acyl-CoA synthetase; Validated 100.0
PRK12406 509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK13391 511 acyl-CoA synthetase; Provisional 100.0
PLN02479 567 acetate-CoA ligase 100.0
PRK07868 994 acyl-CoA synthetase; Validated 100.0
PRK08162 545 acyl-CoA synthetase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK08276 502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09192 579 acyl-CoA synthetase; Validated 100.0
PRK07768 545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05850 578 acyl-CoA synthetase; Validated 100.0
PRK09029 458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
KOG1180 678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1179 649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PRK07445 452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
PRK07824 358 O-succinylbenzoic acid--CoA ligase; Provisional 99.9
TIGR02155 422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 99.86
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 99.86
TIGR03335 445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.83
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.74
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.72
COG1541 438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.5
PF1374591 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A. 99.24
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.06
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.04
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.35
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 92.77
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.8e-73  Score=636.44  Aligned_cols=581  Identities=60%  Similarity=1.078  Sum_probs=483.2

Q ss_pred             CCCccccchhhhHHhcCCccchhhhHHHHHHHhhccCCCCCcHHHHHHHHHhhccCCCCCchhHHHHHHHhhcccccccC
Q 007595            1 MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASIN   80 (597)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~lv~~l~~~r~~~~~~l~~fq~~~~~~~~~~   80 (597)
                      |||.+.++.+.+|++.+|..++++.|.++|+++..++.. +...+.-.. ..+.|+|..+.+.|+|+++.++-+|.....
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (728)
T PLN03052          4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGA-SPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL   81 (728)
T ss_pred             ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcC-CchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence            689999999999999999999999999999999977663 556777777 889999999999999999999999988776


Q ss_pred             CCCccccCCccccccccHHHHHHHhCCccccccCCCCCCCHHHHHHHHhhCHHHHHHHHHHHcCceeeccccccccCCCC
Q 007595           81 GPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDK  160 (597)
Q Consensus        81 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  160 (597)
                      ++.+.|.|+.+....+.+..+++..++......|..++.+|+.|++++++++..||..+++.+.+.|.+++..+++....
T Consensus        82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~  161 (728)
T PLN03052         82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE  161 (728)
T ss_pred             CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence            66788999988777888888877764433333366666789999999999999999999999988999999998865323


Q ss_pred             CCCCCCcCCCCcchHhhhhccCccccCCCCCceEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 007595          161 SKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAID  239 (597)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~  239 (597)
                      ..+..+||+++.+|++++|++++.  +++|+++|+++.+++.+++..+++||+||.++++++|++|+++ +++||+|+++
T Consensus       162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~  239 (728)
T PLN03052        162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID  239 (728)
T ss_pred             CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence            445678999999999999998765  5789999999876532234567899999999999999999999 9999999999


Q ss_pred             CCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCeeEEEEccceeccCccccchhhHHhcCCCeEEEEecCCC
Q 007595          240 MPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGD  319 (597)
Q Consensus       240 ~~~s~e~i~a~LA~~k~Ga~~vpl~p~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  319 (597)
                      ++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++.+.++++.++....+.+.....++++...+.
T Consensus       240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~  319 (728)
T PLN03052        240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK  319 (728)
T ss_pred             eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999998877777777777776655555666554321


Q ss_pred             ccccccccCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEecCCCCCCceEEEeCCchHHHHHHHHhhhcCCCCCCE
Q 007595          320 DVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDV  399 (597)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~  399 (597)
                      ...........+|++++.............+...++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~  399 (728)
T PLN03052        320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI  399 (728)
T ss_pred             ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence            11111112345688776543210001112222345689999999999999999999999998877776666788999999


Q ss_pred             EEEecCchhhhhHHHHHHHHHhCCeEEeeCCCCChhhHHHHHHHcCCeEEEecHHHHHHHHhcCccCCCCCCCccEEEee
Q 007595          400 YCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST  479 (597)
Q Consensus       400 ~l~~~~~~~~~~~~~i~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~g  479 (597)
                      +++.++++|+++.+.++.+|++|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus       400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~  479 (728)
T PLN03052        400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST  479 (728)
T ss_pred             EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence            99999999999998888999999999999877777889999999999999999999999987764556789999999999


Q ss_pred             CCCCCcchHHHHHHhcCCCCeecccCcccccccccccCCCCCCCcCccCCCCCCcEEEEEcCCCCcCCCCCCceeeEEEe
Q 007595          480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLF  559 (597)
Q Consensus       480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~IlD~~~~~vp~G~~giGel~v~  559 (597)
                      ||+++++...|+...++..+++|.||+||++++++......+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus       480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~  559 (728)
T PLN03052        480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF  559 (728)
T ss_pred             CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence            99999999888887765568999999999987655444444556789999999999999999999999997557999998


Q ss_pred             cccCCCchhhhccccccccccccccc
Q 007595          560 PLYLGATDRLLNADHEEVYFSGMPIY  585 (597)
Q Consensus       560 ~gy~~~~~~~~~~~~~~~~~~~~p~~  585 (597)
                      +.+++++.++++++..+.||.++|..
T Consensus       560 ~~~~~~~~~~~~~~~~~~yf~~~p~~  585 (728)
T PLN03052        560 PLMFGASSTLLNADHYKVYFKGMPVF  585 (728)
T ss_pred             CCCCCCCccccCchhhhhhhhcCCCC
Confidence            88888888888887777888777743

>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query597
2p2q_A 652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 1e-27
2p2b_A 652 Acetyl-coa Synthetase, V386a Mutation Length = 652 1e-27
2p2f_A 652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 1e-27
2p20_A 652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 1e-27
2p2j_A 652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 2e-27
2p2m_A 652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 1e-26
1pg3_A 652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-26
1ry2_A 663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 3e-13
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 4e-08
3r44_A 517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 6e-08
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 190/442 (42%), Gaps = 48/442 (10%)
Query: 167 WLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANAL 226
           W     LN+A  CL     L++  D  A++W  D  D S    ++Y+EL   V   AN L
Sbjct: 69  WYEDGTLNLAANCL--DRHLQENGDRTAIIWEGD--DTSQSKHISYRELHRDVCRFANTL 124
Query: 227 -DTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            D    KGD +AI MPM   A +  LA    G V   I   F+   +A R+  S ++ + 
Sbjct: 125 LDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVI 184
Query: 286 TQDFILRGGRKFPLYSKVAEAGPLK---------AVVLPVIGDDVGIQLRQQDVSWKDFL 336
           T D  +R GR  PL   V +A  LK          +VL   G D+  Q   +D+ W+D +
Sbjct: 185 TADEGVRAGRSIPLKKNVDDA--LKNPNVTSVEHVIVLKRTGSDIDWQ-EGRDLWWRDLI 241
Query: 337 SCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI-DMK 395
                   P++ P      D +  IL++SG+TG+PK +  T    +  AA  + ++ D  
Sbjct: 242 E----KASPEHQPEAMNAEDPLF-ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYH 296
Query: 396 VGDVYCWPTNLGWVMG-PIILFSSFLSGAALALYHGS---PLERSFGKFVQDSGVSVLGT 451
            GD+Y    ++GWV G   +L+     GA   ++ G    P      + V    V++L T
Sbjct: 297 PGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYT 356
Query: 452 VPSLVKAW--KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYK--PIIECCGGT 507
            P+ ++A   +    ++G D + +R   S GE  N +   W   K   +  P+++    T
Sbjct: 357 APTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQT 416
Query: 508 ELASSYIQGSMLQPQAFG-AFSTATMTTGF-----VILDELGVPYPDDQPCVGEVGLFPL 561
           E       G M+ P          + T  F      ++D  G  +P +    G + +   
Sbjct: 417 ETG-----GFMITPLPGAIELKAGSATRPFFGVQPALVDNEG--HPQEGATEGNLVITDS 469
Query: 562 YLGATDRLLNADH---EEVYFS 580
           + G   R L  DH   E+ YFS
Sbjct: 470 WPGQA-RTLFGDHERFEQTYFS 490
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query597
2v7b_A 529 Benzoate-coenzyme A ligase; benzoate oxidation, be 6e-36
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 9e-35
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-31
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 3e-26
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 5e-26
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 2e-25
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 6e-25
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 1e-24
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 1e-24
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 6e-24
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 9e-24
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 2e-23
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 2e-23
3r44_A 517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 8e-21
4fuq_A 503 Malonyl COA synthetase; ANL superfamily, methylma 8e-20
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 1e-18
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-18
1t5h_X 504 4-chlorobenzoyl COA ligase; adenylate-forming coen 2e-16
3nyq_A 505 Malonyl-COA ligase; A/B topology ababa sandwich be 8e-16
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-09
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 9e-09
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 3e-08
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 5e-05
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
 Score =  140 bits (355), Expect = 6e-36
 Identities = 76/398 (19%), Positives = 124/398 (31%), Gaps = 42/398 (10%)

Query: 167 WLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANAL 226
             P ++ N A                 A +  +           TY EL ER    A+AL
Sbjct: 17  EAPPALFNFAAYLF---RLNETRAGKTAYID-DTG-------STTYGELEERARRFASAL 65

Query: 227 DTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            T+     + I + M  TV   + +L  + AG V V         +    L  S A+ + 
Sbjct: 66  RTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125

Query: 286 TQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGP 345
               ++         ++  E+       L V          +    +++ +         
Sbjct: 126 ASGALV------QNVTQALESAEHDGCQLIVSQPRES--EPRLAPLFEELID-----AAA 172

Query: 346 KYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPI---RCAAEAWGHIDMKVGDVYCW 402
                     D +   L+SSG+TG+PK    T  +        A+    + +   DV   
Sbjct: 173 PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPI--LGIAENDVVFS 230

Query: 403 PTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKN 461
              L +  G    L      GA   L    P   +    + +   +V   VP+L      
Sbjct: 231 AAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLV 290

Query: 462 TNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYY-KPIIECCGGTELASSYIQGSM-L 519
           +  L       IR   S GE      ++     A++   I++  G TE    +I  S   
Sbjct: 291 SPNLPARADVAIRICTSAGEALPR--EIGERFTAHFGCEILDGIGSTE--MLHIFLSNRA 346

Query: 520 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVG 557
               +G            + DE G   PD     GEVG
Sbjct: 347 GAVEYGTTGRPVPGYEIELRDEAGHAVPD-----GEVG 379
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query597
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
1ry2_A 663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
1pg4_A 652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3etc_A 580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
1mdb_A 539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3o83_A 544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3r44_A 517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
4fuq_A 503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
4gr5_A 570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3e7w_A 511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3fce_A 512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 100.0
2d1s_A 548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
1amu_A 563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3l8c_A 521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A 529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
1t5h_X 504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3kxw_A 590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ite_A 562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3ipl_A 501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A 505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3gqw_A 576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.97
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 99.96
2y4o_A 443 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.96
3qov_A 436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 99.96
2y27_A 437 Phenylacetate-coenzyme A ligase; phenylacetic acid 99.95
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.71
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.23
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 98.18
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 96.92
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 93.67
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 84.39
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 83.25
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 82.38
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 82.29
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 82.07
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 81.49
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 80.07
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=1.5e-68  Score=638.67  Aligned_cols=508  Identities=15%  Similarity=0.142  Sum_probs=393.9

Q ss_pred             hhHHhcCCccchhhhHHHHHHHhhccCCCC-CcHHHHHHHHHhhccCCCCCchhHHHHHHHhhcccccccCCC-------
Q 007595           11 VDLVKVGLKVDEAEDFDNILKQLIDGSKGL-DPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGP-------   82 (597)
Q Consensus        11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~l~~fq~~~~~~~~~~~~-------   82 (597)
                      .+.+++++.+++..+|.++|++++++..++ +||++||++ +++.++      ++|+  ||+||++++.....       
T Consensus       299 vntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~l~------~~~l--f~~~~~~~~~~~~~~~~~~~~  369 (1304)
T 2vsq_A          299 INVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQAD------QPKL--IDHIIVFENYPLQDAKNEESS  369 (1304)
T ss_dssp             CEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHSSS------CSSS--CCCEEEECSSCHHHHSCCCHH
T ss_pred             eeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHHhC------CCcc--cceeEEEeecccccccccccc
Confidence            355678889999999999999999998888 999999999 999884      4577  99999988642110       


Q ss_pred             --CccccC-CccccccccHHHHHHHhCCcccccc-CCCCCCCHHHHHHHHhhCHHHHHHHHHHHcCceeecccccc--cc
Q 007595           83 --PLYWFP-SLDQSKLTNLGHAMEIHGPKFLGAM-YKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCI--LD  156 (597)
Q Consensus        83 --~~~~~~-~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~  156 (597)
                        .....+ .....++|||++.+. .++++.+.+ |++     ++|++.++++|.++|.++|+++..+++.+..++  +.
T Consensus       370 ~~g~~~~~~~~~~~~~~dL~l~~~-~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~  443 (1304)
T 2vsq_A          370 ENGFDMVDVHVFEKSNYDLNLMAS-PGDEMLIKLAYNE-----NVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVD  443 (1304)
T ss_dssp             HHSEEEEEEEECCCCCSSEEEEEE-CSSSCEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHSTTSBGGGCCCCC
T ss_pred             cCCceeEeeecccccccCeEEEEe-cCCcEEEEEEECC-----ccCCHHHHHHHHHHHHHHHHHhccCccccccccCCCC
Confidence              000000 011356889888654 356788899 999     999999999999999999999987766665543  33


Q ss_pred             CCCCCCCCCCcCCCCcchHhhhhccC--ccccCCCCCceEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCC
Q 007595          157 RTDKSKHGGTWLPGSVLNVAECCLLP--SSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKG  233 (597)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~g  233 (597)
                      ..++......|+.+..... ..+++.  ..+++++||++|+++.++        ++||+||+++++++|++|++. +++|
T Consensus       444 ~~e~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g  514 (1304)
T 2vsq_A          444 DREREFLLTGLNPPAQAHE-TKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKG  514 (1304)
T ss_dssp             HHHHHHHHTTTSCCCCCCC-CCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCc
Confidence            2222222345665433222 122322  236689999999998765        999999999999999999999 9999


Q ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCeeEEEEccceeccCccccchhhHHhcCCCeEEE
Q 007595          234 DAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVV  313 (597)
Q Consensus       234 d~Vai~~~~s~e~i~a~LA~~k~Ga~~vpl~p~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (597)
                      ++|+|+++||+++++++|||+|+|++||||||.+|.+|+.+++++++++++|++..........+        .....++
T Consensus       515 ~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~--------~~~~~~~  586 (1304)
T 2vsq_A          515 SVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELP--------YTGTTLF  586 (1304)
T ss_dssp             CEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCC--------CCSEEEE
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccC--------CCCcEEE
Confidence            99999999999999999999999999999999999999999999999999999875421110000        0011111


Q ss_pred             EecCCCccccccccCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEecCCCCCCceEEEeCCchHHHHHHHHhhhcC
Q 007595          314 LPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID  393 (597)
Q Consensus       314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~th~~l~~~~~~~~~~~~  393 (597)
                      +.  ..             ..... ..      ..+.....++++|||+|||||||+||||+++|+++.+. .+....++
T Consensus       587 ~~--~~-------------~~~~~-~~------~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~  643 (1304)
T 2vsq_A          587 ID--DQ-------------TRFEE-QA------SDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMA  643 (1304)
T ss_dssp             SS--CG-------------GGGGS-CS------SCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSC
T ss_pred             ec--cc-------------ccccc-cc------CCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcC
Confidence            11  00             00000 00      11223456899999999999999999999999999876 55556788


Q ss_pred             CCCCCEEEEecCchhhhhHHHHHHHHHhCCeEEeeCC--CCChhhHHHHHHHcCCeEEEecHHHHHHHHhcCccCCCCCC
Q 007595          394 MKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG--SPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWT  471 (597)
Q Consensus       394 ~~~~d~~l~~~~~~~~~~~~~i~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~l~  471 (597)
                      ++++|++++.++++|+.+.+++|.+|++|+++++.+.  ..++..+.+.|++++||++.++|++++.|.+..   ...++
T Consensus       644 ~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~  720 (1304)
T 2vsq_A          644 FSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMK  720 (1304)
T ss_dssp             CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCC
Confidence            8999999999999999999999999999999999874  357889999999999999999999999998653   22367


Q ss_pred             CccEEEeeCCCCCcchHHHHHHhcCCCCeecccCcccccccccccCCC---CCCCcCccCCCCCCcEEEEEcCCCCcCCC
Q 007595          472 KIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML---QPQAFGAFSTATMTTGFVILDELGVPYPD  548 (597)
Q Consensus       472 sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~IlD~~~~~vp~  548 (597)
                      +||.+++|||++++++.+++.+.+++++++|.||+||+++.++.....   ......++|+|++|++++|+|++++++|.
T Consensus       721 ~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~  800 (1304)
T 2vsq_A          721 GLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPF  800 (1304)
T ss_dssp             TCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCT
T ss_pred             CccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCC
Confidence            899999999999999988888887778999999999998765543321   22345689999999999999999999999


Q ss_pred             CCCceeeEEE-----ecccCCCchhhhccccccccccccccccceeeeeCCC
Q 007595          549 DQPCVGEVGL-----FPLYLGATDRLLNADHEEVYFSGMPIYKGMVCVDLPF  595 (597)
Q Consensus       549 G~~giGel~v-----~~gy~~~~~~~~~~~~~~~~~~~~p~~t~~rf~~~pf  595 (597)
                      |++  |||+|     ++||+                 ++|+.|+++|+++||
T Consensus       801 G~~--GEl~i~G~~v~~GY~-----------------~~p~~T~~~f~~~p~  833 (1304)
T 2vsq_A          801 GAV--GELCISGMGVSKGYV-----------------NRADLTKEKFIENPF  833 (1304)
T ss_dssp             TCC--EEEEEEETTCCCCBT-----------------TCHHHHHHHEEECTT
T ss_pred             CCc--eEEEEeccccCcccc-----------------CCcccchhhhccCCC
Confidence            995  99999     34444                 455566666666665
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 597
d1pg4a_ 643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-56
d1ry2a_ 640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 3e-48
d1v25a_ 534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-27
d1lcia_ 541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 5e-24
d1amua_ 514 e.23.1.1 (A:) Phenylalanine activating domain of g 7e-22
d1mdba_ 536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-19
d3cw9a1 503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 2e-15
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  199 bits (508), Expect = 1e-56
 Identities = 109/481 (22%), Positives = 194/481 (40%), Gaps = 35/481 (7%)

Query: 126 KFTVEHPEAYWEIVLKEISVKFHEAPKCILDRT-DKSKHGGTWLPGSVLNVAECCLLPSS 184
           K ++  P+ +W    K +   +    + + + +         W     LN+A  CL    
Sbjct: 25  KQSINDPDTFWGEQGKIL--DWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCL--DR 80

Query: 185 RLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAIDMPMT 243
            L++  D  A++W  D  D S    ++Y+EL   V   AN L  +   KGD +AI MPM 
Sbjct: 81  HLQENGDRTAIIWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMV 138

Query: 244 VHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
             A +  LA    G V   I   F+   +A  +  S ++ + T D  +R GR  PL   V
Sbjct: 139 PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNV 198

Query: 304 AEAGPLKAVVLPVIGDDVGIQLRQQDVSW---KDFLSCVDYHPGPKYYPPVYRPVDSVIN 360
            +A  LK   +  +   + ++    D+ W   +D             + P     +  + 
Sbjct: 199 DDA--LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLF 256

Query: 361 ILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI-DMKVGDVYCWPTNLGWVMGPI-ILFSS 418
           IL++SG+TG+PK +  T    +  AA  + ++ D   GD+Y    ++GWV G   +L+  
Sbjct: 257 ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGP 316

Query: 419 FLSGAALALYHGSPLERS---FGKFVQDSGVSVLGTVPSLVKAWKNTN--CLQGLDWTKI 473
              GA   ++ G P   +     + V    V++L T P+ ++A        ++G D + +
Sbjct: 317 LACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSL 376

Query: 474 RSFASTGETSNVDDDLWLASK--AYYKPIIECCGGTE---LASSYIQGSMLQPQAFGAFS 528
           R   S GE  N +   W   K      P+++    TE      + + G++      G+ +
Sbjct: 377 RILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAI--ELKAGSAT 434

Query: 529 TATMTTGFVILDELGVPYPDDQP---CVGE--VGLFPLYLG---ATDRLLNADHEEVYFS 580
                    ++D  G P          + +   G      G     ++   +  + +YFS
Sbjct: 435 RPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFS 494

Query: 581 G 581
           G
Sbjct: 495 G 495
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query597
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_ 536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1l5aa2250 VibH {Vibrio cholerae [TaxId: 666]} 98.25
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 90.16
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 89.68
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 85.11
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 83.36
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 81.34
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=3.5e-62  Score=540.98  Aligned_cols=461  Identities=24%  Similarity=0.366  Sum_probs=361.1

Q ss_pred             CCHHHHHHHHhhCHHHHHHHHHHHcCceeeccccccccCCCC-CCCCCCcCCCCcchHhhhhccCccccCCCCCceEEEE
Q 007595          119 TSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDK-SKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVW  197 (597)
Q Consensus       119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~  197 (597)
                      .+|+.+++++++++..||..+++.  .+|..++.++++.... .....+||+++.+|++++++++|.  +.+||++|+++
T Consensus        18 ~~y~~l~~~s~~~~~~fW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~N~~~n~ldrh~--~~~~d~~Ali~   93 (643)
T d1pg4a_          18 EQYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAIIW   93 (643)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEEEE
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhh--eeEECCCcccccCccCCCCCCCeeCCCChhhHHHHHHHHHH--HhCCCCEEEEE
Confidence            456888999999999999999987  5688888888765421 223457999999999999999876  77899999998


Q ss_pred             eccCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHH
Q 007595          198 REDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRL  276 (597)
Q Consensus       198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~i~a~LA~~k~Ga~~vpl~p~~~~~~l~~~l  276 (597)
                      .+.  +.+..+++||+||.++++++|++|+++ |++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus        94 ~~~--~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~~l  171 (643)
T d1pg4a_          94 EGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCI  171 (643)
T ss_dssp             ECS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHH
T ss_pred             Eec--CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHH
Confidence            654  345678999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             HhcCeeEEEEccceeccCccccchhhHHhcC-----C--CeEEEEecCCCccccccccCcccHHHHhcccCCCCCCCCCC
Q 007595          277 RVSKAKGIFTQDFILRGGRKFPLYSKVAEAG-----P--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYP  349 (597)
Q Consensus       277 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (597)
                      ++++++++|+++...+.++.......+...+     .  ..++++...+..... .......+.+.......     ...
T Consensus       172 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~  245 (643)
T d1pg4a_         172 IDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----EHQ  245 (643)
T ss_dssp             HHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----CCC
T ss_pred             HhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc-ccccchhhhhhhcccCc-----ccC
Confidence            9999999999988777666665555443321     1  233444332221111 11122334444333222     223


Q ss_pred             CccCCCCCeEEEEecCCCCCCceEEEeCCchHHHH-HHHHhhhcCCCCCCEEEEecCchhhhhHH-HHHHHHHhCCeEEe
Q 007595          350 PVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRC-AAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALAL  427 (597)
Q Consensus       350 ~~~~~~~~~a~iiyTSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~i~~~L~~G~~lvl  427 (597)
                      +....++|+++|+|||||||+||||+++|++++.. .......++++++|++++.+|++|++++. .++++|++|+++++
T Consensus       246 ~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl  325 (643)
T d1pg4a_         246 PEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLM  325 (643)
T ss_dssp             CCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEE
T ss_pred             CCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            44567899999999999999999999999996544 44455668899999999999999999974 57889999999999


Q ss_pred             eCCC---CChhhHHHHHHHcCCeEEEecHHHHHHHHhcCc--cCCCCCCCccEEEeeCCCCCcchHHHHHHhcC--CCCe
Q 007595          428 YHGS---PLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY--YKPI  500 (597)
Q Consensus       428 ~~~~---~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~~l  500 (597)
                      +++.   +++..++++|++++||++.++|++++.|++...  ....++++||.+++|||++++++.+++.+.++  ++++
T Consensus       326 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i  405 (643)
T d1pg4a_         326 FEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPV  405 (643)
T ss_dssp             ECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCE
T ss_pred             ecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceE
Confidence            8753   478899999999999999999999999987643  34667999999999999999999999988875  5789


Q ss_pred             ecccCcccccccccccCC-CCCCCcCccCCCCCCcEEEEEcCCCCcCCCCCCceeeEEEecccCCCchhhhcccc--ccc
Q 007595          501 IECCGGTELASSYIQGSM-LQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADH--EEV  577 (597)
Q Consensus       501 ~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~IlD~~~~~vp~G~~giGel~v~~gy~~~~~~~~~~~~--~~~  577 (597)
                      +|.||+||++..++...+ ..+.+.+++|+|++|++++|+|++|++++.|+  +|||+|...+++...+|+++.+  .+.
T Consensus       406 ~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~--~Gel~v~~~~p~~~~~~~~~~~~~~~~  483 (643)
T d1pg4a_         406 VDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFEQT  483 (643)
T ss_dssp             EEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHHHH
T ss_pred             EEeechhhccceEEecCCCccCCCCCccccccCCCEEEEECCCCCCCCCCc--eEEEEEecCCCcccccccCChhhchhh
Confidence            999999999875544333 23456789999999999999999999999998  5999995444444444444432  223


Q ss_pred             cccccccc--cceeeeeC
Q 007595          578 YFSGMPIY--KGMVCVDL  593 (597)
Q Consensus       578 ~~~~~p~~--t~~rf~~~  593 (597)
                      |+...+++  ||+...-+
T Consensus       484 ~~~~~~g~~~TGDl~~~d  501 (643)
T d1pg4a_         484 YFSTFKNMYFSGDGARRD  501 (643)
T ss_dssp             HHSSSTTSEEEEEEEEEC
T ss_pred             hcccCCCeEEcCCEEEEC
Confidence            33333332  66655443
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure