Citrus Sinensis ID: 007637

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-----
MKPQRDSEKKMEASPHQQIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDKMPERNEDTSGIREPPTV
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccc
cccccccccccccccEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccEEHccEEEEEccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
mkpqrdsekkmeasphqqikqppskpeggslrtmpfIIVNESFEKVasygllpnMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSsllgtttlwstamipqlkpapcnqlvssncssatPAQFAILLSSFALISIgagcvrpcsiafgadqldnkdnpknkRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGShlyikvqpdkslFTSFIQVIVASLRKislypssntvnyyhakdsnyvtptdnlrFLNKAcmienpeedlnpdgtasnpwklcsiGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKtmdrhispsfqipagsfTVFTIITVTLWIAIYDRAVVPILVkftghprglspkmrMGIGLLLSAVSMASAAVVENKRRKFaidqglvdepqkvmDMSAMWLIPQFSLIGLAEAFNAIGQIEFYysqlpksmSSMAMAIFTLGMAVANLLGGLLVKIVDRVtrkhgkeswlssnlnkghLDYFYWLLMAMCLVNFGYFLVCCWaygpsvdvaemptdkmpernedtsgirepptv
mkpqrdsekkmeasphqqikqppskpeggslRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAfgadqldnkdnpKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFtghprglspKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHgkeswlssnlnkGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDkmpernedtsgirepptv
MKPQRDSEKKMEASPHQQIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVIllgsfssllgtttlwstAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGlllsavsmasaavvENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDKMPERNEDTSGIREPPTV
********************************TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLD******NKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIE*************NPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVD*************************
******************************LRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN*******S*ATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKD****KRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYP***********************FLNKACMIE*****************LCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYG*****************************
****************************GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDKM****************
*************SPHQQIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPE******GTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVD*************************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKPQRDSEKKMEASPHQQIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDKMPERNEDTSGIREPPTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query595 2.2.26 [Sep-21-2011]
Q9M817607 Probable peptide transpor yes no 0.961 0.942 0.528 0.0
Q8LPL2591 Probable peptide/nitrate no no 0.959 0.966 0.521 0.0
Q8RX77620 Nitrate transporter 1.7 O no no 0.954 0.916 0.387 1e-120
Q9LV10616 Probable peptide/nitrate no no 0.927 0.896 0.382 1e-116
Q9SX20596 Probable nitrite transpor no no 0.963 0.961 0.394 1e-115
Q9M9V7587 Probable peptide/nitrate no no 0.931 0.943 0.387 1e-112
P46032585 Peptide transporter PTR2 no no 0.890 0.905 0.382 1e-108
Q9M390570 Peptide transporter PTR1 no no 0.889 0.928 0.380 1e-108
Q944G5636 Probable peptide/nitrate no no 0.882 0.825 0.384 1e-107
Q93Z20590 Probable peptide/nitrate no no 0.884 0.891 0.382 1e-105
>sp|Q9M817|PTR6_ARATH Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1 Back     alignment and function desciption
 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/592 (52%), Positives = 427/592 (72%), Gaps = 20/592 (3%)

Query: 11  MEASPHQ----QIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVE 66
           ME  P++    QI+    K   G + TMPFII NE+FEKVASYGLLPNMI YL+  Y   
Sbjct: 1   MENPPNETEAKQIQTNEGKKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFG 60

Query: 67  AANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLK 126
            A G ++L +WS+ SNF  ++GAFL+DSY+GRF  I + S SS LG   LW TAM+PQ+K
Sbjct: 61  VAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVK 120

Query: 127 PAPCNQLVS-SNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKR 185
           P+PC+   + S+C S+T +Q A+L S+FALISIG+G +RPCS+AFGADQLDNK+NPKN+R
Sbjct: 121 PSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNER 180

Query: 186 VLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIK 245
           VLE+FF WYYAS++V+ ++AFT IVYIQ+HLGWKIGFGV A+LM+++ L+F+  S LY+ 
Sbjct: 181 VLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVT 240

Query: 246 VQPDKSLFTSFIQVIVASL--RKISLYPSSNTVN-YYHAKDSNYVTPTDNLRFLNKACMI 302
               KSLFT   Q IVA+   RK+SL    ++ + YYH KDS    P+  LRFLNKAC+I
Sbjct: 241 RGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIKAPSQKLRFLNKACLI 300

Query: 303 ENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKT 362
            N EE++  DG A NPW+LC+  +VE LKAL+++ P+ STGI++ ++ +Q +F  LQA +
Sbjct: 301 SNREEEIGSDGFALNPWRLCTTDKVEELKALIKVIPIWSTGIMMSINTSQSSFQLLQATS 360

Query: 363 MDRHIS---PSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGI 419
           MDR +S    SFQ+PAGSF +FTII + LW+ +YDRAV+P+  K  G P  LS K+RMG+
Sbjct: 361 MDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGL 420

Query: 420 GLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIG 479
           GL +S ++MA +A+VE+ RRK AI QG  +    V+D+SAMWL+PQ+ L GLAEA  AIG
Sbjct: 421 GLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIG 480

Query: 480 QIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGH 539
           Q EF+Y++ PKSMSS+A ++F LGMAVA+LL  +++  V+ +T ++GKESW+S N+NKGH
Sbjct: 481 QTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGH 540

Query: 540 LDYFYWLLMAMCLVNFGYFLVCCWAYGPSVDVAEMPTDKMPERNEDTSGIRE 591
            +Y+YW+L  M  +N  Y+++C W+YGP VD           RN   +G+RE
Sbjct: 541 YNYYYWVLAIMSFINVIYYVICSWSYGPLVDQV---------RNGRVNGVRE 583

Arabidopsis thaliana (taxid: 3702)
>sp|Q8LPL2|PTR32_ARATH Probable peptide/nitrate transporter At3g16180 OS=Arabidopsis thaliana GN=At3g16180 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX77|PTR21_ARATH Nitrate transporter 1.7 OS=Arabidopsis thaliana GN=NRT1.7 PE=1 SV=1 Back     alignment and function description
>sp|Q9LV10|PTR53_ARATH Probable peptide/nitrate transporter At5g62680 OS=Arabidopsis thaliana GN=At5g62680 PE=2 SV=1 Back     alignment and function description
>sp|Q9SX20|PTR18_ARATH Probable nitrite transporter At1g68570 OS=Arabidopsis thaliana GN=At1g68570 PE=2 SV=1 Back     alignment and function description
>sp|Q9M9V7|PTR8_ARATH Probable peptide/nitrate transporter At1g18880 OS=Arabidopsis thaliana GN=At1g18880 PE=2 SV=1 Back     alignment and function description
>sp|P46032|PTR2_ARATH Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1 Back     alignment and function description
>sp|Q9M390|PTR1_ARATH Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1 Back     alignment and function description
>sp|Q944G5|PTR44_ARATH Probable peptide/nitrate transporter At3g47960 OS=Arabidopsis thaliana GN=At3g47960 PE=1 SV=3 Back     alignment and function description
>sp|Q93Z20|PTR17_ARATH Probable peptide/nitrate transporter At1g62200 OS=Arabidopsis thaliana GN=At1g62200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query595
225429973592 PREDICTED: probable peptide transporter 0.951 0.956 0.609 0.0
296081862 1181 unnamed protein product [Vitis vinifera] 0.951 0.479 0.609 0.0
359476042583 PREDICTED: probable peptide transporter 0.937 0.957 0.590 0.0
224089038572 predicted protein [Populus trichocarpa] 0.937 0.975 0.597 0.0
225442569584 PREDICTED: probable peptide transporter 0.978 0.996 0.547 0.0
297743243622 unnamed protein product [Vitis vinifera] 0.961 0.919 0.554 0.0
255549914612 nitrate transporter, putative [Ricinus c 0.964 0.937 0.539 0.0
15218183607 putative peptide transporter [Arabidopsi 0.961 0.942 0.528 0.0
297847594607 proton-dependent oligopeptide transport 0.961 0.942 0.520 0.0
15233307591 major facilitator protein [Arabidopsis t 0.959 0.966 0.521 1e-180
>gi|225429973|ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g52190 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/569 (60%), Positives = 441/569 (77%), Gaps = 3/569 (0%)

Query: 4   QRDSEKKMEASPH-QQIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNG 62
           Q  +E +M  +P+  + + PP KP  G  RTMPFIIVN+S EKVA +G++PNMIFYLMNG
Sbjct: 3   QIIAEDQMGFAPNPNRSRYPPPKPRYGGFRTMPFIIVNQSLEKVAGFGIMPNMIFYLMNG 62

Query: 63  YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMI 122
           YH+EAA G+++L  WS+ S  LA+ GA L+D Y+GRF VI  GSFSSLLG T LW TAMI
Sbjct: 63  YHMEAATGSTILFTWSAFSKSLAVFGALLSDFYLGRFRVIAFGSFSSLLGITLLWLTAMI 122

Query: 123 PQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPK 182
           P LKP PC+QL + NC+SATPAQ A+L +S  LIS+GAGC+RPCSIAFGADQLDNK+NP 
Sbjct: 123 PWLKPPPCDQL-NDNCNSATPAQLAVLFTSLGLISVGAGCIRPCSIAFGADQLDNKENPD 181

Query: 183 NKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242
           N  VL++FFNWYYAS  VS ++A T I YIQDHLGWK GFGV  ILMV S LMF+ GS L
Sbjct: 182 NDTVLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGVPVILMVFSALMFVLGSSL 241

Query: 243 YIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYY-HAKDSNYVTPTDNLRFLNKACM 301
           YI+V+P K+L T F+QV+V + +   L   +++V YY H+ D  ++ PT  LR LNKAC+
Sbjct: 242 YIRVKPGKNLLTGFVQVLVVAFKNRCLTLPTDSVGYYNHSSDPKFLAPTSELRCLNKACI 301

Query: 302 IENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAK 361
           I +P  DLN DG+ SNPW LCS+  VES+K+LLR+ P+ STGI+IL+S+ Q +F+TLQA 
Sbjct: 302 IRDPNRDLNSDGSTSNPWSLCSVELVESVKSLLRVIPLWSTGIMILMSMEQTSFSTLQAN 361

Query: 362 TMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGL 421
           TMDRHI+P+F+IPAG+F+VFTIIT+T+W+ +YD  +VPIL ++TG  RGLSPK+RMGIGL
Sbjct: 362 TMDRHITPNFEIPAGTFSVFTIITLTIWLPVYDCLLVPILARYTGQLRGLSPKVRMGIGL 421

Query: 422 LLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQI 481
           +LS ++MA AA  E  RR+ A  QGL D+P   ++MSA+WL+PQ+ L+GLAEAFN IGQ 
Sbjct: 422 VLSCMAMAVAAATEMIRRRIATKQGLEDQPAATVNMSALWLLPQYVLLGLAEAFNGIGQN 481

Query: 482 EFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLD 541
           EFYYSQ PKSMSS+A A+FTLG+A+++  G LLV +V+ VT K GKESWLSSNLNKGHLD
Sbjct: 482 EFYYSQFPKSMSSLAGALFTLGLALSSFAGSLLVNVVNSVTTKGGKESWLSSNLNKGHLD 541

Query: 542 YFYWLLMAMCLVNFGYFLVCCWAYGPSVD 570
           Y+Y L+  + ++NF YFLVCC  YGP  D
Sbjct: 542 YYYGLIAVLGMINFIYFLVCCRLYGPCED 570

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296081862|emb|CBI20867.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359476042|ref|XP_002281400.2| PREDICTED: probable peptide transporter At1g52190-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224089038|ref|XP_002308609.1| predicted protein [Populus trichocarpa] gi|222854585|gb|EEE92132.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225442569|ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743243|emb|CBI36110.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255549914|ref|XP_002516008.1| nitrate transporter, putative [Ricinus communis] gi|223544913|gb|EEF46428.1| nitrate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15218183|ref|NP_175630.1| putative peptide transporter [Arabidopsis thaliana] gi|75186219|sp|Q9M817.1|PTR2X_ARATH RecName: Full=Probable peptide transporter At1g52190 gi|6850341|gb|AAF29404.1|AC022354_3 peptide transporter, putative [Arabidopsis thaliana] gi|332194645|gb|AEE32766.1| putative peptide transporter [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297847594|ref|XP_002891678.1| proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] gi|297337520|gb|EFH67937.1| proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15233307|ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana] gi|310947330|sp|Q8LPL2.2|PTR32_ARATH RecName: Full=Probable peptide/nitrate transporter At3g16180 gi|332642260|gb|AEE75781.1| major facilitator protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query595
TAIR|locus:2037452607 AT1G52190 [Arabidopsis thalian 0.941 0.922 0.514 1.6e-157
TAIR|locus:2093442591 AT3G16180 [Arabidopsis thalian 0.959 0.966 0.502 4.4e-155
TAIR|locus:2026884596 AT1G68570 [Arabidopsis thalian 0.963 0.961 0.385 1.4e-105
TAIR|locus:2196800620 NRT1.7 "nitrate transporter 1. 0.966 0.927 0.369 4.1e-104
TAIR|locus:2172249616 GTR2 "AT5G62680" [Arabidopsis 0.927 0.896 0.373 9.8e-103
TAIR|locus:2035005587 NRT1.9 "nitrate transporter 1. 0.915 0.928 0.375 2.4e-99
TAIR|locus:2080235570 PTR1 "peptide transporter 1" [ 0.890 0.929 0.368 2.5e-97
TAIR|locus:2041125585 PTR2 "peptide transporter 2" [ 0.887 0.902 0.369 7.6e-96
TAIR|locus:2018032590 PTR6 "peptide transporter 6" [ 0.884 0.891 0.364 5.3e-95
TAIR|locus:2147499559 AT5G28470 [Arabidopsis thalian 0.872 0.928 0.376 7e-93
TAIR|locus:2037452 AT1G52190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
 Identities = 294/571 (51%), Positives = 400/571 (70%)

Query:    11 MEASPHQ----QIKQPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVE 66
             ME  P++    QI+    K   G + TMPFII NE+FEKVASYGLLPNMI YL+  Y   
Sbjct:     1 MENPPNETEAKQIQTNEGKKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFG 60

Query:    67 AANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVIXXXXXXXXXXXXXXXXXAMIPQLK 126
              A G ++L +WS+ SNF  ++GAFL+DSY+GRF  I                 AM+PQ+K
Sbjct:    61 VAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVK 120

Query:   127 PAPCNQLVS-SNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKR 185
             P+PC+   + S+C S+T +Q A+L S+FALISIG+G +RPCS+AFGADQLDNK+NPKN+R
Sbjct:   121 PSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNER 180

Query:   186 VLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIK 245
             VLE+FF WYYAS++V+ ++AFT IVYIQ+HLGWKIGFGV A+LM+++ L+F+  S LY+ 
Sbjct:   181 VLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVT 240

Query:   246 VQPDKSLFTSFIQVIVASL--RKISLYPSSNTVN-YYHAKDSNYVTPTDNLRFLNKACMI 302
                 KSLFT   Q IVA+   RK+SL    ++ + YYH KDS    P+  LRFLNKAC+I
Sbjct:   241 RGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIKAPSQKLRFLNKACLI 300

Query:   303 ENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKT 362
              N EE++  DG A NPW+LC+  +VE LKAL+++ P+ STGI++ ++ +Q +F  LQA +
Sbjct:   301 SNREEEIGSDGFALNPWRLCTTDKVEELKALIKVIPIWSTGIMMSINTSQSSFQLLQATS 360

Query:   363 MDRHIS---PSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGI 419
             MDR +S    SFQ+PAGSF +FTII + LW+ +YDRAV+P+  K  G P  LS K+RMG+
Sbjct:   361 MDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGL 420

Query:   420 GXXXXXXXXXXXXXXENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIG 479
             G              E+ RRK AI QG  +    V+D+SAMWL+PQ+ L GLAEA  AIG
Sbjct:   421 GLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIG 480

Query:   480 QIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGH 539
             Q EF+Y++ PKSMSS+A ++F LGMAVA+LL  +++  V+ +T ++GKESW+S N+NKGH
Sbjct:   481 QTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGH 540

Query:   540 LDYFYWLLMAMCLVNFGYFLVCCWAYGPSVD 570
              +Y+YW+L  M  +N  Y+++C W+YGP VD
Sbjct:   541 YNYYYWVLAIMSFINVIYYVICSWSYGPLVD 571
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006857 "oligopeptide transport" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2093442 AT3G16180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026884 AT1G68570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196800 NRT1.7 "nitrate transporter 1.7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172249 GTR2 "AT5G62680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035005 NRT1.9 "nitrate transporter 1.9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080235 PTR1 "peptide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041125 PTR2 "peptide transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018032 PTR6 "peptide transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147499 AT5G28470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M817PTR6_ARATHNo assigned EC number0.52870.96130.9423yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query595
pfam00854372 pfam00854, PTR2, POT family 2e-61
COG3104498 COG3104, PTR2, Dipeptide/tripeptide permease [Amin 4e-23
TIGR00926 641 TIGR00926, 2A1704, Peptide:H+ symporter (also tran 2e-18
PRK15462493 PRK15462, PRK15462, dipeptide/tripeptide permease 5e-09
TIGR00924475 TIGR00924, yjdL_sub1_fam, amino acid/peptide trans 8e-07
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 1e-06
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 2e-04
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 0.002
TIGR00926641 TIGR00926, 2A1704, Peptide:H+ symporter (also tran 0.003
PRK09584500 PRK09584, tppB, putative tripeptide transporter pe 0.004
>gnl|CDD|216153 pfam00854, PTR2, POT family Back     alignment and domain information 
 Score =  207 bits (529), Expect = 2e-61
 Identities = 103/374 (27%), Positives = 166/374 (44%), Gaps = 26/374 (6%)

Query: 134 VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193
           + +   S +P Q A+      LI++G G ++P   AFGADQ D           + FF+W
Sbjct: 20  LGAIPPSLSPVQVALFYIGLYLIALGTGGIKPNVSAFGADQFD----ETQDPRRDGFFSW 75

Query: 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQP--DKS 251
           +Y S +   ++A  I  Y+Q ++G+ +GFG+ A+ M+L+ L+FL GS  Y K  P     
Sbjct: 76  FYFSINAGSLIATIITPYLQQNVGYPLGFGLPAVGMLLALLVFLLGSRRYKKKAPPGGSP 135

Query: 252 LFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNP 311
                  +I A+ +   L    ++   Y A +          +   +  +I  P      
Sbjct: 136 FTVCIAFIITAAGKNRKLQLPKDSHWLYWALEKYNKRSISQTKVHTRVAVIFIPLPKFWA 195

Query: 312 DGTASNPWKLCSIGQVESLKALLRITPMCSTGII--ILLSLNQQTFATLQAKTMDRHISP 369
                        G V  L+A+L + P+ +  I+   + +    T    Q  TMDR I P
Sbjct: 196 --------LFDQQGSVWLLQAILLMLPIWAFWILPDQMWTQL-ATLIVRQVPTMDRIIYP 246

Query: 370 SFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMA 429
            F+IP  SF  F  + V + + I D  V P+L       RGL+   R G+G+ +  V+  
Sbjct: 247 LFEIPPASFQSFNPLAVLILLPILDFLVYPLL----RLKRGLTLPQRFGLGMFILIVANF 302

Query: 430 SAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLP 489
            AA+VE KR ++A   GL      V  +  +W +P+  + G+  A    G +EF    LP
Sbjct: 303 LAAIVEAKRPRYAAALGLTSPGWTVP-LFILWSLPELFISGVGLA----GALEFAPDALP 357

Query: 490 KSMSSMAMAIFTLG 503
            SM S+   +    
Sbjct: 358 SSMMSLWTLLSAAA 371

The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters. Length = 372
>gnl|CDD|225646 COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>gnl|CDD|237971 PRK15462, PRK15462, dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>gnl|CDD|233189 TIGR00924, yjdL_sub1_fam, amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>gnl|CDD|181969 PRK09584, tppB, putative tripeptide transporter permease; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 595
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 100.0
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 100.0
PRK10207489 dipeptide/tripeptide permease B; Provisional 100.0
PRK15462493 dipeptide/tripeptide permease D; Provisional 100.0
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 100.0
PRK09584500 tppB putative tripeptide transporter permease; Rev 100.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 99.96
PRK05122399 major facilitator superfamily transporter; Provisi 99.93
PRK11646400 multidrug resistance protein MdtH; Provisional 99.93
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.93
PRK03545390 putative arabinose transporter; Provisional 99.93
PRK12382392 putative transporter; Provisional 99.92
PRK10504471 putative transporter; Provisional 99.92
PRK10054395 putative transporter; Provisional 99.92
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.92
PRK09874408 drug efflux system protein MdtG; Provisional 99.91
PRK11663434 regulatory protein UhpC; Provisional 99.91
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.91
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.91
PRK10489417 enterobactin exporter EntS; Provisional 99.91
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.91
TIGR00893399 2A0114 d-galactonate transporter. 99.91
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.91
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.9
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.9
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.9
TIGR00900365 2A0121 H+ Antiporter protein. 99.9
PRK09705393 cynX putative cyanate transporter; Provisional 99.9
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.9
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.9
TIGR00891405 2A0112 putative sialic acid transporter. 99.9
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.9
KOG2532466 consensus Permease of the major facilitator superf 99.9
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.9
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.9
PRK10091382 MFS transport protein AraJ; Provisional 99.89
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.89
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.89
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.89
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.89
PRK03699394 putative transporter; Provisional 99.89
PLN00028476 nitrate transmembrane transporter; Provisional 99.89
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.89
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.89
PRK12307426 putative sialic acid transporter; Provisional 99.89
PRK09952438 shikimate transporter; Provisional 99.89
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.89
PRK10642490 proline/glycine betaine transporter; Provisional 99.89
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.88
TIGR00895398 2A0115 benzoate transport. 99.88
PRK09528420 lacY galactoside permease; Reviewed 99.88
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.88
PRK15011393 sugar efflux transporter B; Provisional 99.88
TIGR00897402 2A0118 polyol permease family. This family of prot 99.88
PRK03633381 putative MFS family transporter protein; Provision 99.88
PRK03893496 putative sialic acid transporter; Provisional 99.88
PRK11652394 emrD multidrug resistance protein D; Provisional 99.87
TIGR00898505 2A0119 cation transport protein. 99.87
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.87
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 99.87
PRK11195393 lysophospholipid transporter LplT; Provisional 99.87
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.87
PRK11043401 putative transporter; Provisional 99.87
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.86
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.86
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.86
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.85
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.85
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.85
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.85
PRK15075434 citrate-proton symporter; Provisional 99.85
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.84
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.84
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.84
PRK10133438 L-fucose transporter; Provisional 99.84
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.84
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.84
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.83
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.83
PRK11010491 ampG muropeptide transporter; Validated 99.83
KOG0254513 consensus Predicted transporter (major facilitator 99.81
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.81
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.8
KOG0569485 consensus Permease of the major facilitator superf 99.8
TIGR00896355 CynX cyanate transporter. This family of proteins 99.79
PRK11902402 ampG muropeptide transporter; Reviewed 99.78
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.78
TIGR00901356 2A0125 AmpG-related permease. 99.78
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.77
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.77
PRK10429473 melibiose:sodium symporter; Provisional 99.76
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.75
PRK09669444 putative symporter YagG; Provisional 99.74
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.74
KOG2615451 consensus Permease of the major facilitator superf 99.74
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.73
PRK09848448 glucuronide transporter; Provisional 99.73
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.7
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.69
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.69
TIGR00805633 oat sodium-independent organic anion transporter. 99.69
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.69
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.68
PF13347428 MFS_2: MFS/sugar transport protein 99.68
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.66
PTZ00207591 hypothetical protein; Provisional 99.66
PRK11462460 putative transporter; Provisional 99.64
KOG2533495 consensus Permease of the major facilitator superf 99.62
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.6
COG2211467 MelB Na+/melibiose symporter and related transport 99.57
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.55
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.54
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.51
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.48
PRK09952438 shikimate transporter; Provisional 99.46
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.46
PRK15011393 sugar efflux transporter B; Provisional 99.45
PRK10642490 proline/glycine betaine transporter; Provisional 99.44
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.39
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.39
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.38
PRK09705393 cynX putative cyanate transporter; Provisional 99.38
PRK05122399 major facilitator superfamily transporter; Provisi 99.37
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.35
PRK03699394 putative transporter; Provisional 99.35
KOG2325488 consensus Predicted transporter/transmembrane prot 99.34
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.33
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.32
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.31
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.31
PRK09528420 lacY galactoside permease; Reviewed 99.31
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.3
PRK12382392 putative transporter; Provisional 99.29
PRK03893496 putative sialic acid transporter; Provisional 99.28
KOG2563480 consensus Permease of the major facilitator superf 99.28
TIGR00893399 2A0114 d-galactonate transporter. 99.28
PRK09874408 drug efflux system protein MdtG; Provisional 99.28
PRK03545390 putative arabinose transporter; Provisional 99.27
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.27
TIGR00891405 2A0112 putative sialic acid transporter. 99.26
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.25
TIGR00897402 2A0118 polyol permease family. This family of prot 99.25
PRK11663434 regulatory protein UhpC; Provisional 99.24
PRK15075434 citrate-proton symporter; Provisional 99.24
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.24
PRK10489417 enterobactin exporter EntS; Provisional 99.24
PRK03633381 putative MFS family transporter protein; Provision 99.22
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.21
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.2
COG2270438 Permeases of the major facilitator superfamily [Ge 99.19
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.18
PRK11010491 ampG muropeptide transporter; Validated 99.18
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.17
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.16
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.16
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.16
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.16
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.15
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.15
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.13
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.11
KOG3626735 consensus Organic anion transporter [Secondary met 99.1
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.09
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.08
PRK10504471 putative transporter; Provisional 99.07
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.05
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.05
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.05
PRK12307426 putative sialic acid transporter; Provisional 99.05
TIGR00900365 2A0121 H+ Antiporter protein. 99.05
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.04
TIGR00896355 CynX cyanate transporter. This family of proteins 99.04
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.03
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.03
PLN00028476 nitrate transmembrane transporter; Provisional 99.02
PF13347428 MFS_2: MFS/sugar transport protein 99.0
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.0
TIGR00895398 2A0115 benzoate transport. 99.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 98.99
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.98
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.98
PRK10091382 MFS transport protein AraJ; Provisional 98.98
KOG3762618 consensus Predicted transporter [General function 98.97
PRK11902402 ampG muropeptide transporter; Reviewed 98.96
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.95
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.95
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.93
PRK10054395 putative transporter; Provisional 98.92
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 98.92
PRK10133438 L-fucose transporter; Provisional 98.91
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 98.9
PRK09848448 glucuronide transporter; Provisional 98.9
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 98.89
COG2270438 Permeases of the major facilitator superfamily [Ge 98.89
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.89
PRK10213394 nepI ribonucleoside transporter; Reviewed 98.88
PRK10429473 melibiose:sodium symporter; Provisional 98.84
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.84
PRK11646400 multidrug resistance protein MdtH; Provisional 98.83
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.83
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.79
PRK11195393 lysophospholipid transporter LplT; Provisional 98.79
TIGR00901356 2A0125 AmpG-related permease. 98.75
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.74
PRK09669444 putative symporter YagG; Provisional 98.73
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.73
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.72
TIGR00898505 2A0119 cation transport protein. 98.71
KOG0569485 consensus Permease of the major facilitator superf 98.7
KOG2532466 consensus Permease of the major facilitator superf 98.7
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.68
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.65
PRK10473392 multidrug efflux system protein MdtL; Provisional 98.64
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.64
PRK11043401 putative transporter; Provisional 98.62
COG2211467 MelB Na+/melibiose symporter and related transport 98.57
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 98.55
KOG3098461 consensus Uncharacterized conserved protein [Funct 98.52
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.48
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.45
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.45
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 98.41
PRK11652394 emrD multidrug resistance protein D; Provisional 98.35
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.34
PRK11462460 putative transporter; Provisional 98.33
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.28
COG0738422 FucP Fucose permease [Carbohydrate transport and m 98.27
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.22
PRK15403413 multidrug efflux system protein MdtM; Provisional 98.21
COG0477338 ProP Permeases of the major facilitator superfamil 98.21
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.2
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.18
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 98.05
KOG2533495 consensus Permease of the major facilitator superf 98.05
PRK09584500 tppB putative tripeptide transporter permease; Rev 97.96
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.95
PRK10207489 dipeptide/tripeptide permease B; Provisional 97.94
KOG3762618 consensus Predicted transporter [General function 97.93
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 97.93
TIGR00788468 fbt folate/biopterin transporter. The only functio 97.89
PF1283277 MFS_1_like: MFS_1 like family 97.88
KOG0254513 consensus Predicted transporter (major facilitator 97.84
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 97.75
PRK15462 493 dipeptide/tripeptide permease D; Provisional 97.74
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 97.71
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.67
TIGR00805 633 oat sodium-independent organic anion transporter. 97.6
KOG0637498 consensus Sucrose transporter and related proteins 97.56
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 97.49
PTZ00207 591 hypothetical protein; Provisional 97.45
KOG2615 451 consensus Permease of the major facilitator superf 97.4
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 97.38
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.31
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.22
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 96.91
KOG2816463 consensus Predicted transporter ADD1 (major facili 96.89
KOG2563480 consensus Permease of the major facilitator superf 96.82
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 96.82
PRK03612521 spermidine synthase; Provisional 96.76
KOG2325 488 consensus Predicted transporter/transmembrane prot 96.75
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 96.57
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 95.47
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 95.33
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 95.26
KOG3626 735 consensus Organic anion transporter [Secondary met 95.22
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 94.69
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 94.64
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 94.62
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 93.78
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 93.44
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 93.35
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 92.36
KOG3098461 consensus Uncharacterized conserved protein [Funct 92.2
KOG0637 498 consensus Sucrose transporter and related proteins 92.0
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 91.88
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 90.73
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 90.41
PF02487 402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 90.27
KOG3880409 consensus Predicted small molecule transporter inv 89.13
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 88.39
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 88.28
KOG3097390 consensus Predicted membrane protein [Function unk 83.72
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 83.5
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=9.1e-45  Score=396.32  Aligned_cols=532  Identities=43%  Similarity=0.741  Sum_probs=471.3

Q ss_pred             CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637           27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS  106 (595)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~  106 (595)
                      ++..|+.+.+++..+.+|+.++|++..++..|+++.+|.+...+.-..+.+.....+.++++++++|.++||-+++.++.
T Consensus        32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s  111 (571)
T KOG1237|consen   32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS  111 (571)
T ss_pred             eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCCCcc--ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchh
Q 007637          107 FSSLLGTTTLWSTAMIPQLKPAPCNQL--VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNK  184 (595)
Q Consensus       107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~  184 (595)
                      ++..+|..++.++.+.+.+.+++| ..  ....|...+..+...++.++-+.++|.|+..|+..++.+|++++.++.++ 
T Consensus       112 ~i~~~G~~~lt~~a~~~~l~p~~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~-  189 (571)
T KOG1237|consen  112 LISLLGLFGLTLSAMIPALLPFMC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV-  189 (571)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCccc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh-
Confidence            999999999999888999999988 22  23457777777888999999999999999999999999999996555444 


Q ss_pred             hhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHH
Q 007637          185 RVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASL  264 (595)
Q Consensus       185 ~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (595)
                      +.+.+.++|+|+..++|..++..+..++.+..||.+.|.+..++..++.++++...+.++.+.+.+++++.+.+++..+.
T Consensus       190 ~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~  269 (571)
T KOG1237|consen  190 KGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAA  269 (571)
T ss_pred             hCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHH
Confidence            55679999999999999999999999999999999999999999999999999988888888888999999999999999


Q ss_pred             hhccccCCCCCccc-cccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhh
Q 007637          265 RKISLYPSSNTVNY-YHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTG  343 (595)
Q Consensus       265 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  343 (595)
                      ++++...+.++... ...........++..+++|++.+..+++.   ..+....+|++|+.+++|+.|..++.+++|...
T Consensus       270 ~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~---~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~  346 (571)
T KOG1237|consen  270 FKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDL---KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT  346 (571)
T ss_pred             HHHhccCCCcchhccccccccccccCCcccchhhHhhccCCccc---ccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence            99887766553322 11111122334577899999888655433   356677899999999999999999999999999


Q ss_pred             Hhhhhhccc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHH
Q 007637          344 IIILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLL  422 (595)
Q Consensus       344 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  422 (595)
                      +++++.+.| .++++.|...++++.+++|.+|++....+..+...+..|+++++..|+.+|.++++.|+++..++.+|+.
T Consensus       347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~  426 (571)
T KOG1237|consen  347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV  426 (571)
T ss_pred             HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence            999999999 8888999999999998679999999999999999999999999999999999987767999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHH
Q 007637          423 LSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTL  502 (595)
Q Consensus       423 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~  502 (595)
                      +..+++...+..+.+|++....     ....+.++|++|++++|+++|++|.+..++..++.++++|++||+.+++++.+
T Consensus       427 ~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~  501 (571)
T KOG1237|consen  427 LSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL  501 (571)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence            9999999999999888887755     12223568999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCcccc-cCCCCchhhHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 007637          503 GMAVANLLGGLLVKIVDRVTRKHGKESWLS-SNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVD  570 (595)
Q Consensus       503 ~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~~~~  570 (595)
                      ..++|+.++..++..+...+++  ..+|+. ++.|.++++.+||+++....+....+..+.++++++..
T Consensus       502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~  568 (571)
T KOG1237|consen  502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDD  568 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeeccc
Confidence            9999999999999998877643  358998 99999999999999999999999999988888776543

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query595
2xut_A524 Crystal Structure Of A Proton Dependent Oligopeptid 4e-07
>pdb|2XUT|A Chain A, Crystal Structure Of A Proton Dependent Oligopeptide (Pot) Family Transporter. Length = 524 Back     alignment and structure 
Iteration: 1

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 32  RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHV---EAANGASMLSIWSSIS---NFLA 85
           R +P+II +E+ E+ + YG+   +  +LM    +   E   GA    ++ S      F  
Sbjct: 12  RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFP 71
Query: 86  IVGAFLADSYMGRFWVIXXXXXXXXXXXXXXXXXAMIPQLKPAPCNQLVSSNCSSATPAQ 145
           ++G ++AD + G++                      I  L    C   V     +     
Sbjct: 72  LLGGWIADRFFGKY--------------------NTILWLSLIYC---VGHAFLAIFEHS 108
Query: 146 FAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLA 205
                +   LI++G+G ++P   +F  DQ D      NK + +  F+ +Y + +     A
Sbjct: 109 VQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQS----NKSLAQKAFDMFYFTINFGSFFA 164
Query: 206 FTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASL 264
              +  +  + G  + FG+  +LM ++T+ F  G   YI + P+      F+ VI ++L
Sbjct: 165 SLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSAL 223

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query595
2xut_A524 Proton/peptide symporter family protein; transport 1e-105
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 6e-14
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Length = 524 Back     alignment and structure
 Score =  325 bits (836), Expect = e-105
 Identities = 98/547 (17%), Positives = 197/547 (36%), Gaps = 65/547 (11%)

Query: 32  RTMPFIIVNESFEKVASYGLLPNMIFYLM------NGYHVEAANGASMLSIWSSISNFLA 85
           R +P+II +E+ E+ + YG+   +  +LM          +  A    +   +     F  
Sbjct: 12  RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFP 71

Query: 86  IVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQ 145
           ++G ++AD + G++  IL  S    +G   L                       +     
Sbjct: 72  LLGGWIADRFFGKYNTILWLSLIYCVGHAFL-----------------------AIFEHS 108

Query: 146 FAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLA 205
                +   LI++G+G ++P   +F  DQ D  +    K + +  F+ +Y + +     A
Sbjct: 109 VQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSN----KSLAQKAFDMFYFTINFGSFFA 164

Query: 206 FTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLR 265
              +  +  + G  + FG+  +LM ++T+ F  G   YI + P+      F+ VI ++L 
Sbjct: 165 SLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALL 224

Query: 266 KISLYPSSNTVNYY------HAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPW 319
                  +  +          A     +     +  L  A ++                 
Sbjct: 225 TKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERAR 284

Query: 320 KLCSIGQVESLKALLRITPMCSTGIIILLSLNQQ-TFATLQAKTMDRHISPSFQIPAGSF 378
           K      V+ ++++LRI  + +         +Q+ +   LQA  M +             
Sbjct: 285 KSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKP----QWFEPAMM 340

Query: 379 TVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKR 438
                + V L I   +  + P + +       L    +MG G+ ++ +S      ++   
Sbjct: 341 QALNPLLVMLLIPFNNFVLYPAIERMGVKLTAL---RKMGAGIAITGLSWIVVGTIQLMM 397

Query: 439 RKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMA 498
              +              +S  W I  ++L+   E   +   +EF YSQ PK+M    M+
Sbjct: 398 DGGSA-------------LSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMS 444

Query: 499 IFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYF 558
            +TL + V NL   L    V   T     E  + + ++      F++   A  ++    F
Sbjct: 445 FWTLSVTVGNLWVLLANVSVKSPT---VTEQIVQTGMSVTAFQMFFFAGFA--ILAAIVF 499

Query: 559 LVCCWAY 565
            +   +Y
Sbjct: 500 ALYARSY 506
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query595
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.97
2xut_A524 Proton/peptide symporter family protein; transport 99.96
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.94
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.93
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.91
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.86
2cfq_A417 Lactose permease; transport, transport mechanism, 99.85
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.45
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.38
2cfq_A417 Lactose permease; transport, transport mechanism, 99.25
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.07
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.02
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 98.75
2xut_A 524 Proton/peptide symporter family protein; transport 98.09
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
Probab=99.97  E-value=5.4e-30  Score=278.64  Aligned_cols=433  Identities=19%  Similarity=0.284  Sum_probs=291.3

Q ss_pred             CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhh-----cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhHH
Q 007637           28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNG-----YHVEAANGASMLSIWSSISNFLAIVGAFLADS-YMGRFWV  101 (595)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr-~~Grr~~  101 (595)
                      ++++|.++.+....+++.+++|+..++++.|+.+.     +|++..+.+++.+++.++..++++++|+++|| + |||++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-g~r~~   87 (491)
T 4aps_A            9 FGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRII-GARPA   87 (491)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CHHHH
T ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchHH
Confidence            45667888888899999999999999999999998     99999999999999999999999999999999 7 99999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637          102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNP  181 (595)
Q Consensus       102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~  181 (595)
                      +.++.++..++.++++++.                        +...++++|+++|++.|...++..++++|.+|+++  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--  141 (491)
T 4aps_A           88 VFWGGVLIMLGHIVLALPF------------------------GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHD--  141 (491)
T ss_dssp             HHHHHHHHHHHHHHHHSCC------------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCT--
T ss_pred             HHHHHHHHHHHHHHHHHhh------------------------hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCccc--
Confidence            9999999999988887654                        56778999999999999999999999999999865  


Q ss_pred             chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc---CCCC-ChhHHHH
Q 007637          182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV---QPDK-SLFTSFI  257 (595)
Q Consensus       182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~  257 (595)
                         +.|++++++++...++|..++|.+++++.++.||+++|++.++..+++.+.+++..++..++   +++. ....+..
T Consensus       142 ---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (491)
T 4aps_A          142 ---RRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVK  218 (491)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHH
T ss_pred             ---ccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCccccchhH
Confidence               34788999999999999999999999999999999999998777666666655443332111   1111 1111111


Q ss_pred             HHHHH--------------HHhhccccCCCCCccccccCCCCccCCCCchhhhh----------hhhcccCCCCCCCCCC
Q 007637          258 QVIVA--------------SLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLN----------KACMIENPEEDLNPDG  313 (595)
Q Consensus       258 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~  313 (595)
                      +....              .......+.                  ++......          .....+++        
T Consensus       219 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--------  272 (491)
T 4aps_A          219 PLLVKVSLAVAGFIAIIVVMNLVGWNSL------------------PAYINLLTIVAIAIPVFYFAWMISSV--------  272 (491)
T ss_dssp             HHHHHCCCCCHHHHHHHHHHHHHSSCCT------------------THHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCccc------------------ccchhhhhHHHHHHHHHHHHHHhhcc--------
Confidence            10000              000000000                  00000000          00000000        


Q ss_pred             CCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cc-eeeeeccccCCCCCCCcccccccccchhHHHHHHHHH
Q 007637          314 TASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QT-FATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIA  391 (595)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  391 (595)
                               .. ...+.+.......++.....++..+.+ .. +..+.....+...     ...+.......+..++..+
T Consensus       273 ---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  337 (491)
T 4aps_A          273 ---------KV-TSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSW-----FPVSWFQSLNPLFIMLYTP  337 (491)
T ss_dssp             -------------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSS-----SCSGGGTTHHHHHHHHHHH
T ss_pred             ---------cc-cHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCc-----cCHHHHhccchHHHHHHHH
Confidence                     00 001222222333444444444444444 22 2122222222211     3355566667777777777


Q ss_pred             hHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHH
Q 007637          392 IYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGL  471 (595)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~  471 (595)
                      +.+++    .+|+++|+  ......+..+.++.++++..+.+.....       +    +  ..+.+.+++++.+++.++
T Consensus       338 ~~~~l----~~r~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~--~~~~~~~~~~~~~~l~g~  398 (491)
T 4aps_A          338 FFAWL----WTAWKKNQ--PSSPTKFAVGLMFAGLSFLLMAIPGALY-------G----T--SGKVSPLWLVGSWALVIL  398 (491)
T ss_dssp             HHHHH----HHHTTTC-----CHHHHHHHHHHHHHHHTTTHHHHHHC-------C----C--CTTCCTHHHHHHHHHHHH
T ss_pred             HHHHH----HHHHhccC--CCchHHHHHHHHHHHHHHHHHHHHHHhc-------C----C--CCCccHHHHHHHHHHHHH
Confidence            66554    66666654  4555667788888888877776543110       0    0  012467788888899999


Q ss_pred             HHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHH
Q 007637          472 AEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMC  551 (595)
Q Consensus       472 g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~  551 (595)
                      +.+...+..+.+..|.+|++.||+++|+.++.+.+|+.+++.+.+.+.+.                 ++.+.|.+.++++
T Consensus       399 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~-----------------~~~~~~~~~~~~~  461 (491)
T 4aps_A          399 GEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAK-----------------SEVAYFSYFGLGS  461 (491)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGS-----------------STTHHHHHTHHHH
T ss_pred             HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------cHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999997776531                 2346788888888


Q ss_pred             HHHHHHHHHhhhcccc
Q 007637          552 LVNFGYFLVCCWAYGP  567 (595)
Q Consensus       552 l~~~v~~~~~~~~~~~  567 (595)
                      +++.++++++.++.++
T Consensus       462 ~~~~~~~~~~~~~~~~  477 (491)
T 4aps_A          462 VVLGIVLVFLSKRIQG  477 (491)
T ss_dssp             HHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8888777776655443
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query595
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.94
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.89
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.32
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.29
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.3e-25  Score=232.86  Aligned_cols=162  Identities=11%  Similarity=0.014  Sum_probs=136.2

Q ss_pred             hHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 007637           52 LPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN  131 (595)
Q Consensus        52 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  131 (595)
                      ...+.+++. ++|+|.++.+++.+++.++..++.+++|+++||+ |||+++.++.++.+++.++++++.....       
T Consensus        44 ~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~-------  114 (447)
T d1pw4a_          44 FALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWATS-------  114 (447)
T ss_dssp             HHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHCHHHHS-------
T ss_pred             HHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHhhccccchhhh-------
Confidence            455667776 5899999999999999999999999999999996 9999999999999998888776531111       


Q ss_pred             ccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH
Q 007637          132 QLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY  211 (595)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~  211 (595)
                                   +...+++.|++.|++.|...+...++++|.+|+       ++|++.+++.+.+.++|..++|.+++.
T Consensus       115 -------------~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~i~~~~~~~  174 (447)
T d1pw4a_         115 -------------SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-------KERGGIVSVWNCAHNVGGGIPPLLFLL  174 (447)
T ss_dssp             -------------SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTT-------THHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             -------------hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh-------hcccccccccccccchhhhhhhhhhhh
Confidence                         467789999999999999999999999999998       558999999999999999999998887


Q ss_pred             hhcc-cchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637          212 IQDH-LGWKIGFGVRAILMVLSTLMFLFGSHL  242 (595)
Q Consensus       212 l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~  242 (595)
                      +... .+|++.|++.++..++..+..++..++
T Consensus       175 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~  206 (447)
T d1pw4a_         175 GMAWFNDWHAALYMPAFCAILVALFAFAMMRD  206 (447)
T ss_dssp             HHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCC
T ss_pred             HhhhhhcccccchhhhhhHHHHHHHHHHhccc
Confidence            6654 479999998887766665555555444
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure