Citrus Sinensis ID: 007688

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590---
MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
ccHHHHHHccccEEEcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccccccEEcccccccccccccEEEEEEEEEEEccccccEEEEEEEcccccEEEEEEEEEEcccccEEEEEcccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHccccccEEEccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHcccccccccccccccHHHHHHHcccccHHHHHHHcccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccEEcccccccccccccccccccccHHHHHHHHHccccccHHHHHHcccEEEEEccccccccccccccccccccccEEEEEEEccccccccEEEEEccccccccccccEEEcccccccccHHHHHHHHHHHHccccEEEccccc
ccHHHHHHcccHEEccccccccccHHHcccccEEEccccccEEEEEccccccccccccEEEEEcccccccEEEEHHHcccccccccccccccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccEEcccccccccccccEEEEEEEEEccccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccHHHcHHHccccEcccccccccEEcccccEcccccccEccccccccEEcccccHccHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHcccccHHHHcEccccccEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccHHHccccccccHHHHHHcccEEEEEEccccHHHHHHHcccccEccEEEEEEEEccccccEEEEEEEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHHccccccEEEccc
MALTREFMGAFSifersssssssskvLLNQSTFWQNKLLQQkqflvpvqqrrvhsrkagaagvrrginnpvaALSEDLVKGaassavpgaaekpvKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELvgtevdprtkgpkksREAVLKDWSKKSNVKAERVHYTAEflvdsnfgtpgaITVANKHQKEFFLETitiegfacgpvhfqcnswvqstkdhpgkriffanqpylpsetpaGLRALREKELKDirgtgkgvrklsdriydydvyndlgnpdrgsefvrpslggeqrpyprrcrtgrlptdtdllaesriekplpiyvprdeqfeesKQDAFSAGRLKGALHNLIPLLKASisarnhdfsgfsdidslysEGLLLnlglkdgllkklplpnvvSKIQESsqgllkynspkilsrdkfawlRDDEFARQALagvnpvsierlqafppvsnldpkiygpqesalkeehiigQLDGMSVQQALEEnklyvldfhdiyLPFLDRinaldgrksyaTRTIFFLNslgtlkpiaielslppsgpsprskrvltpaadatSNWLWQLAKAHVCSNDAGVHQLVNHW
MALTREFMGAFsifersssssssSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVhsrkagaagvrrginnPVAALSEDLVKGAASsavpgaaekpvkfkVRAVLTVRknikedfkETLVNQFdaltekigrnvvlelvgtevdprtkgpkksreavlkdwskksnvkaerVHYTAeflvdsnfgTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKElkdirgtgkgvrklsdriydydvyndlgnpdrgsefvrpslggeqrpyprrcrtgrlptdtdllaesriekplpiyvprdeQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQessqgllkynspkiLSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
MALTREFMGAFSIFERssssssssKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEglllnlglkdgllkklplpnVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIElslppsgpsprsKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
**************************LLNQSTFWQNKLLQQKQFLVPVQQRRV********GVRRGINNPVAAL******************KPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTE************************VKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYL******************IRGTGKGVRKLSDRIYDYDVYNDL***********************************************IY*****************GRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYG******KEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIE*************************************************
**************************************************************************************************VRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELV********************DWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDT******R*EKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAI***************VLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
MALTREFMGAFSIF************LLNQSTFWQNKLLQQKQFLVPV*************GVRRGINNPVAALSEDL***********AAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEV****************DWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPS************AADATSNWLWQLAKAHVCSNDAGVHQLVNHW
*AL*REFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRR*HSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query593 2.2.26 [Sep-21-2011]
Q9LNR3 919 Lipoxygenase 3, chloropla yes no 0.964 0.622 0.691 0.0
O24371 914 Linoleate 13S-lipoxygenas N/A no 0.966 0.626 0.699 0.0
Q9FNX8 926 Lipoxygenase 4, chloropla no no 0.973 0.623 0.686 0.0
Q8H016 918 Probable lipoxygenase 6 O yes no 0.876 0.566 0.666 0.0
Q7XV13 899 Putative lipoxygenase 5 O no no 0.903 0.596 0.610 0.0
Q9CAG3 917 Lipoxygenase 6, choloropl no no 0.905 0.585 0.474 1e-131
O24370 899 Linoleate 13S-lipoxygenas N/A no 0.920 0.607 0.406 1e-117
Q8GSM2 896 Lipoxygenase 2.3, chlorop N/A no 0.892 0.590 0.405 1e-111
P38415 860 Linoleate 9S-lipoxygenase N/A no 0.833 0.574 0.443 1e-110
P38416 859 Linoleate 9S-lipoxygenase N/A no 0.849 0.586 0.431 1e-110
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function desciption
 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/600 (69%), Positives = 468/600 (78%), Gaps = 28/600 (4%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGA 60
           MAL +E MG   I ERSS  SS+S            K  Q  QF +    RR    K+G 
Sbjct: 1   MALAKELMGYPLITERSSLVSSASHF---------KKRTQSTQFSINPFDRRPRKTKSGV 51

Query: 61  AGVRRGINNPVAALSEDLVKGAASSAVPG------AAEKPVKFKVRAVLTVRKNIKEDFK 114
                     VAA+SEDLVK    S   G        +  VKFKVRAV+TVR   KED K
Sbjct: 52  ----------VAAISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLK 101

Query: 115 ETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTA 174
           ETLV   DA  +KIGRN+VLEL+ T++DP+TK PKKS  AVLKDWSKKS  KAERVHYTA
Sbjct: 102 ETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTA 161

Query: 175 EFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFF 234
           EF VD+ FG+PGAITV NKHQKEFFLE+ITIEGFA GPVHF CNSWVQS KDHP KRIFF
Sbjct: 162 EFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFF 221

Query: 235 ANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRP 294
            NQPYLP+ETP+GLR LREKELK++RG G GVRKLSDRIYD+DVYNDLGNPD+ SE  RP
Sbjct: 222 TNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSELSRP 281

Query: 295 SLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGA 354
            LGG++ PYPRRCRTGR  T +D  AESR+EKPLP+YVPRDEQFEESKQD F+AGRLK  
Sbjct: 282 KLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAV 341

Query: 355 LHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPN-VVSKIQES 413
           LH+LIP LKASI A   DF+ F +ID LY EGLLL LG +D + KK PLP  VV  +QES
Sbjct: 342 LHHLIPSLKASIVAE--DFADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVVVDTLQES 399

Query: 414 SQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQE 473
           ++GLLKY++PKILS+DK AWLRDDEFARQA+AG+NPV+IER++ FPPVSNLDPKIYGPQ 
Sbjct: 400 TKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDPKIYGPQH 459

Query: 474 SALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLN 533
           SAL ++HIIG LDG SVQQALEEN+LY+LD+HDI+LPFLDRINALDGRK+YATRTIFFL 
Sbjct: 460 SALTDDHIIGHLDGFSVQQALEENRLYMLDYHDIFLPFLDRINALDGRKAYATRTIFFLT 519

Query: 534 SLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593
            LGTLKP+AIELSLPP GP  RSKRVLTP  DATSNW+WQLAKAHV SNDAGVHQLVNHW
Sbjct: 520 RLGTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHW 579
13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function description
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 Back     alignment and function description
>sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2 Back     alignment and function description
>sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 Back     alignment and function description
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|P38415|LOXA_SOLLC Linoleate 9S-lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 Back     alignment and function description
>sp|P38416|LOXB_SOLLC Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query593
14589309 922 lipoxygenase [Sesbania rostrata] 0.974 0.626 0.723 0.0
224119582 896 predicted protein [Populus trichocarpa] 0.890 0.589 0.758 0.0
187960377 913 lipoxygenase 2 [Olea europaea] 0.957 0.622 0.704 0.0
449447902 907 PREDICTED: linoleate 13S-lipoxygenase 3- 0.956 0.625 0.696 0.0
449480516 907 PREDICTED: LOW QUALITY PROTEIN: linoleat 0.956 0.625 0.696 0.0
407930085 909 lipoxygenase 2 [Capsicum annuum] 0.959 0.625 0.712 0.0
268636249 916 lipoxygenase [Vitis vinifera] 0.969 0.627 0.696 0.0
356558934 922 PREDICTED: linoleate 13S-lipoxygenase 3- 0.966 0.621 0.697 0.0
297742990 927 unnamed protein product [Vitis vinifera] 0.969 0.620 0.695 0.0
359482472 979 PREDICTED: linoleate 13S-lipoxygenase 3- 0.969 0.587 0.695 0.0
>gi|14589309|emb|CAC43237.1| lipoxygenase [Sesbania rostrata] Back     alignment and taxonomy information
 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/597 (72%), Positives = 504/597 (84%), Gaps = 19/597 (3%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGA 60
           MAL +E MG+ S+ ERS   SSSS+VL   S      LL    F VP++ R+V       
Sbjct: 1   MALAKEIMGS-SLVERSLFLSSSSRVLQRHS------LLISPVF-VPLENRKV------- 45

Query: 61  AGVRRGINNPVAALSEDLVKGAASSAVPGAA---EKPVKFKVRAVLTVRKNIKEDFKETL 117
             +R+    PVAA+SEDL+KG++SS+    +   EKPVKFKVRAV+TVR  IKEDFKET+
Sbjct: 46  VRLRKAAKFPVAAISEDLLKGSSSSSASSPSVPAEKPVKFKVRAVVTVRNKIKEDFKETI 105

Query: 118 VNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFL 177
           V   DALT++IGRNVVLELV TE+DP+TK  KKS EAVLKDWSKKSNVKAERV+YTAEF 
Sbjct: 106 VKHIDALTDRIGRNVVLELVSTEIDPKTKAAKKSNEAVLKDWSKKSNVKAERVNYTAEFT 165

Query: 178 VDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQ 237
           VDS+FG PGAITV N HQKEFFLE+ITIEGFA G VHF CNSWVQ+ KDHPGKRIFF+N+
Sbjct: 166 VDSSFGEPGAITVTNNHQKEFFLESITIEGFATGAVHFPCNSWVQARKDHPGKRIFFSNK 225

Query: 238 PYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLG 297
           PYLP++TPAGLR LREKEL+++RG GKGVR LSDRIYDYD YNDLGNPD+G E  RP+LG
Sbjct: 226 PYLPADTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDTYNDLGNPDKGIELARPTLG 285

Query: 298 G-EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALH 356
           G E  PYPRRCRTGR PTDTD+ AESR+EKPLP+YVPRDE+FEESKQ+ FS  RLK  LH
Sbjct: 286 GSETYPYPRRCRTGREPTDTDMYAESRVEKPLPMYVPRDERFEESKQNTFSVKRLKAVLH 345

Query: 357 NLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
           NLIP LKASISA N DF+ F+D+D LYSEGLL+  GL+D +L+KLPLP VVSKIQESSQG
Sbjct: 346 NLIPSLKASISANNQDFNDFTDVDGLYSEGLLIKFGLQDDVLRKLPLPKVVSKIQESSQG 405

Query: 417 LLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESAL 476
           LLKY++PKI+S+DKFAWLRDDEFARQA+AGVNPV+IE+LQ FPPVS LDP++YGPQESAL
Sbjct: 406 LLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIEKLQVFPPVSKLDPELYGPQESAL 465

Query: 477 KEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLG 536
           KEEHI+ QL+GM+VQQA++ENKL+++D+HD+YLPFL+RINALDGRKSYATRTIFFL  +G
Sbjct: 466 KEEHILNQLNGMTVQQAIDENKLFIIDYHDVYLPFLERINALDGRKSYATRTIFFLTPVG 525

Query: 537 TLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593
           TLKP+AIELSLPPSGPS RSKRV+TP ADAT+NW+W LAKAHVC+NDAGVHQLVNHW
Sbjct: 526 TLKPVAIELSLPPSGPSSRSKRVVTPPADATTNWMWMLAKAHVCANDAGVHQLVNHW 582

Source: Sesbania rostrata

Species: Sesbania rostrata

Genus: Sesbania

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224119582|ref|XP_002331196.1| predicted protein [Populus trichocarpa] gi|222873317|gb|EEF10448.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|187960377|gb|ACD43484.1| lipoxygenase 2 [Olea europaea] Back     alignment and taxonomy information
>gi|449447902|ref|XP_004141705.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449480516|ref|XP_004155917.1| PREDICTED: LOW QUALITY PROTEIN: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|407930085|gb|AFU51541.1| lipoxygenase 2 [Capsicum annuum] Back     alignment and taxonomy information
>gi|268636249|gb|ACZ17393.1| lipoxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|356558934|ref|XP_003547757.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297742990|emb|CBI35857.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482472|ref|XP_002273258.2| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query593
TAIR|locus:2030215 926 LOX4 "lipoxygenase 4" [Arabido 0.973 0.623 0.649 1.5e-200
TAIR|locus:2018848 919 LOX3 "lipoxygenase 3" [Arabido 0.964 0.622 0.653 7.6e-199
TAIR|locus:2008808 917 LOX6 "lipoxygenase 6" [Arabido 0.912 0.589 0.458 2.3e-117
UNIPROTKB|P38419 924 CM-LOX1 "Lipoxygenase 7, chlor 0.851 0.546 0.398 5.9e-96
TAIR|locus:2087837 886 LOX5 [Arabidopsis thaliana (ta 0.843 0.564 0.401 7.6e-96
TAIR|locus:2011030 859 LOX1 "lipoxygenase 1" [Arabido 0.854 0.590 0.391 2.5e-90
TAIR|locus:2096915 896 LOX2 "lipoxygenase 2" [Arabido 0.870 0.575 0.348 5.9e-89
UNIPROTKB|P29250 870 LOX1.1 "Linoleate 9S-lipoxygen 0.831 0.566 0.409 9.9e-87
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1941 (688.3 bits), Expect = 1.5e-200, P = 1.5e-200
 Identities = 391/602 (64%), Positives = 450/602 (74%)

Query:     1 MALTREFMGAFSIFERXXXXXXXXKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAG 59
             MAL  E MG+  IFER              S F   K  Q+ QF + P   R +  R   
Sbjct:     1 MALANEIMGSRLIFERSSSLASPF-----HSRFSIKKKTQRTQFSINPFDPRPM--RAVN 53

Query:    60 AAGVRRGINNPVAALSEDLVKGAASSAV------PGAAEKPVKFKVRAVLTVRKNIKEDF 113
             ++GV       VAA+SEDLVK    S V          EK VKFKVRAV TVR   KEDF
Sbjct:    54 SSGV-------VAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDF 106

Query:   114 KETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYT 173
             KETLV   DA T+KIGRNVVLEL+ T+VDP+T  PKKS+ AVLKDWSKKSN KAERVHYT
Sbjct:   107 KETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYT 166

Query:   174 AEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIF 233
             AEF VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHP KRI 
Sbjct:   167 AEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRIL 226

Query:   234 FANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVR 293
             F NQPYLPSETP+GLR LREKEL+++RG GKG RKLSDRIYDYDVYND+GNPD   E  R
Sbjct:   227 FTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELAR 286

Query:   294 PSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKG 353
             P+LGG + PYPRRCRTGR  TDTD+++E R+EKPLP+YVPRDEQFEESKQ+ F+A RLK 
Sbjct:   287 PTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKA 346

Query:   354 ALHNLIPLLKASISARNHDFSGFSDIDSLYSEXXXXXXXXXXXXXXXXXXXXVVSKIQES 413
              LHNLIP LKASI A   DF+ F +IDSLY E                    +V+ +Q+S
Sbjct:   347 VLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKS 404

Query:   414 SQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQ- 472
             S+GLL+Y++PKI+S+DK+AWLRDDEFARQA+AG+NPV+IER+ ++PPVSNLDP+IYGP  
Sbjct:   405 SEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPGL 464

Query:   473 ESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFL 532
              SAL E+HIIGQLDG++VQQALE N+L+++D+HDIYLPFLDRINALDGRK+YATRTI FL
Sbjct:   465 HSALTEDHIIGQLDGLTVQQALETNRLFMVDYHDIYLPFLDRINALDGRKAYATRTILFL 524

Query:   533 NSLGTLKPIAIEXXX-XXXXXXXXXKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVN 591
               LGTLKPIAIE             KRV+TP  DATSNW+WQLAKAHV SNDAGVHQLVN
Sbjct:   525 TRLGTLKPIAIELSLPSQSSSNQKSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVN 584

Query:   592 HW 593
             HW
Sbjct:   585 HW 586
GO:0009507 "chloroplast" evidence=ISM
GO:0009611 "response to wounding" evidence=IEP;RCA;TAS
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IDA
GO:0010193 "response to ozone" evidence=IEP
GO:0009555 "pollen development" evidence=IGI
GO:0009901 "anther dehiscence" evidence=IGI
GO:0048653 "anther development" evidence=IGI
GO:0080086 "stamen filament development" evidence=IGI
GO:0034440 "lipid oxidation" evidence=IDA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0009873 "ethylene mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
GO:0006952 "defense response" evidence=TAS
GO:0040007 "growth" evidence=TAS
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LNR3LOX3_ARATH1, ., 1, 3, ., 1, 1, ., 1, 20.69160.96450.6224yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11.120.914
3rd Layer1.13.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_1580006
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (896 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
fgenesh4_pg.C_LG_II001255
phospholipase A1 (EC-3.1.1.32) (367 aa)
     •  0.899
eugene3.00060391
hypothetical protein (856 aa)
     •  0.899
CYP74B7
cytochrome P450 fatty acid hydroperoxide lyase (492 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VIII0936
SubName- Full=Putative uncharacterized protein; (642 aa)
     •  0.899
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query593
PLN02264 919 PLN02264, PLN02264, lipoxygenase 0.0
PLN02305 918 PLN02305, PLN02305, lipoxygenase 0.0
PLN02337 866 PLN02337, PLN02337, lipoxygenase 1e-171
pfam00305 667 pfam00305, Lipoxygenase, Lipoxygenase 1e-127
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 6e-50
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 6e-18
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 1e-12
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information 
 Score =  977 bits (2527), Expect = 0.0
 Identities = 436/597 (73%), Positives = 497/597 (83%), Gaps = 22/597 (3%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAG 59
           MAL +E MG   IFERSS  SSS         F  +K  Q+ QF + P +Q ++  R+  
Sbjct: 1   MALAKEIMGGRLIFERSSFVSSSK-------HFRNSKRTQRTQFSINPFRQEQL--RRVV 51

Query: 60  AAGVRRGINNPVAALSEDLVKGAASSAVPGA---AEKPVKFKVRAVLTVRKNIKEDFKET 116
            +G        VAA+SEDLVK    S V  +    EK VKFKVRAV+TVR   KED KET
Sbjct: 52  KSG-------VVAAISEDLVKTLRVSTVRKSEEEEEKAVKFKVRAVVTVRNKNKEDLKET 104

Query: 117 LVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEF 176
           LV   DA T+KIGRNVVLEL+ T+VDP+TK PKKS+ AVLKDWSKKSN+KAERVHYTAEF
Sbjct: 105 LVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKKSNIKAERVHYTAEF 164

Query: 177 LVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFAN 236
            VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHPGKRIFF N
Sbjct: 165 TVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTN 224

Query: 237 QPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSL 296
           QPYLPSETPAGLRALREKEL+++RG GKGVRKLSDRIYD+DVYNDLGNPD+  E  RP+L
Sbjct: 225 QPYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTL 284

Query: 297 GGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALH 356
           GG++ PYPRRCRTGRLPTD+D++AESR+EKPLP+YVPRDEQFEESKQD F+AGRLK  LH
Sbjct: 285 GGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLH 344

Query: 357 NLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
           NLIP LKASI A   DF+ F +IDSLY EGLLL LG +D + KK PLP VV+ +QESS+G
Sbjct: 345 NLIPSLKASILA--EDFANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQESSEG 402

Query: 417 LLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESAL 476
           LLKY++PKILS+DKFAWLRDDEFARQA+AG+NPV+IER++ FPPVSNLDP+IYGPQ SAL
Sbjct: 403 LLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSAL 462

Query: 477 KEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLG 536
            E+HIIG LDG+SVQQALEEN+L+++D+HDIYLPFLDRINALDGRK+YATRTIFFL  LG
Sbjct: 463 TEDHIIGHLDGLSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLG 522

Query: 537 TLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593
           TLKPIAIELSLPPSGP+ RSKRV+TP  DATSNW+WQLAKAHVCSNDAGVHQLVNHW
Sbjct: 523 TLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWMWQLAKAHVCSNDAGVHQLVNHW 579

Length = 919
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 593
PLN02264 919 lipoxygenase 100.0
PLN02305 918 lipoxygenase 100.0
PLN02337 866 lipoxygenase 100.0
PF00305 667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.29
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 98.88
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.74
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.15
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 97.73
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 97.69
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.37
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.15
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 96.59
>PLN02264 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=2.5e-172  Score=1440.59  Aligned_cols=576  Identities=75%  Similarity=1.198  Sum_probs=529.9

Q ss_pred             CchhhhhcccccccccCCCcccccchhcccchhhccccccccccccccccccccccccccccccccccCCccccccccee
Q 007688            1 MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVK   80 (593)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (593)
                      ||+++||||-+-.++.++| .+++++|+++...+++||. .+|+.      ..+-+|.++       ..||+++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~   65 (919)
T PLN02264          1 MALAKEIMGGRLIFERSSF-VSSSKHFRNSKRTQRTQFS-INPFR------QEQLRRVVK-------SGVVAAISEDLVK   65 (919)
T ss_pred             CchhhhhhcceeeccCccc-ccchHHHhhcccchhceec-ccccc------HHHHHHHhc-------cCCeeeehHHHHH
Confidence            9999999994444499999 9999999998889889994 57874      111122212       3367999999888


Q ss_pred             eccccc---ccCCCCCCceeEEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeecccCCCCCCCccccccccc
Q 007688           81 GAASSA---VPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLK  157 (593)
Q Consensus        81 ~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~d~~~g~gk~~~~~~l~  157 (593)
                      +...++   +..-.+|...++|||+|+||+|++++++++.++++|+++|++||+|+|||||+++||+||+||+|++++|+
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~  145 (919)
T PLN02264         66 TLRVSTVRKSEEEEEKAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLK  145 (919)
T ss_pred             hhccccccccccCcccceEEEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhc
Confidence            775321   11224554668999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCcCcceeEEEEEEEecCCCCCceEEEEEecCCCceeeeeeEEeecCCceEEEEecccccCCCCCCCcceeeccc
Q 007688          158 DWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQ  237 (593)
Q Consensus       158 ~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~~~i~F~CnSWV~~~~~~~~~RiFF~nk  237 (593)
                      +|++++.+.+++++|+|+|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||
T Consensus       146 ~~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk  225 (919)
T PLN02264        146 DWSKKSNIKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQ  225 (919)
T ss_pred             ccccCCCCCCCceEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCC
Confidence            99976665788889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccCCCCCCCCCC
Q 007688          238 PYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTD  317 (593)
Q Consensus       238 ~yLP~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~RTGR~p~~~D  317 (593)
                      +|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||+||
T Consensus       226 ~YLP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~d  305 (919)
T PLN02264        226 PYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSD  305 (919)
T ss_pred             CcCcccCCHHHHHHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCcccCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhhcCCCCCCCHHhHHHHHhccccccccccccc
Q 007688          318 LLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGL  397 (593)
Q Consensus       318 p~sEsr~~~~~~~yvPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~~~~~~F~sf~Di~~LY~~g~~lp~~~~~~~  397 (593)
                      |++|||.+.+..|||||||+|+++|++||++++|||++|.++|+|+++++.+  +|+||+||++||++|+++|..+.+..
T Consensus       306 p~~Esr~~~~~~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~  383 (919)
T PLN02264        306 MMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDI  383 (919)
T ss_pred             CcccccccCCCceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhH
Confidence            9999998766678999999999999999999999999999999999998865  99999999999999999996323333


Q ss_pred             cccCCchhhhhhhhcccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCcccc
Q 007688          398 LKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALK  477 (593)
Q Consensus       398 ~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~IT  477 (593)
                      .+.+|+|++++++.++++.+||||+|+||++|+++|++|+|||||+|||+||++|++|++||++|+|||+.||+++|+||
T Consensus       384 ~~~~p~~~~~~~~~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it  463 (919)
T PLN02264        384 FKKFPLPKVVTTLQESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALT  463 (919)
T ss_pred             hhcCChHHHHHHhhhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhh
Confidence            44489989999998888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCcHHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCCCCCCCCc
Q 007688          478 EEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSK  557 (593)
Q Consensus       478 ~e~ie~~l~G~TleeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~~~~~~~~  557 (593)
                      ++||+++|+|+||+|||++|||||+||||++|||+++||.++++++|||+||||++++|+|+||||||++++++++++++
T Consensus       464 ~e~v~~~L~G~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~  543 (919)
T PLN02264        464 EDHIIGHLDGLSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSK  543 (919)
T ss_pred             HHHHhhccCCCcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999866666688


Q ss_pred             eEEeCCCCCCCchHHHHHHHHHhhcccceeeeeecC
Q 007688          558 RVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW  593 (593)
Q Consensus       558 ~VfTPsd~~~~~~~W~LAKa~v~~aD~~~HQLisHW  593 (593)
                      +||||+++++++|.|+||||||++||++|||+|+||
T Consensus       544 ~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHl  579 (919)
T PLN02264        544 RVVTPPVDATSNWMWQLAKAHVCSNDAGVHQLVNHW  579 (919)
T ss_pred             eeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999998777789999999999999999999999999

>PLN02305 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query593
2iuj_A 853 Crystal Structure Of Soybean Lipoxygenase-B Length 3e-92
1ik3_A 857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 4e-92
1y4k_A 839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 2e-91
1fgr_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 2e-91
1fgt_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 2e-91
2sbl_B 839 The Three-Dimensional Structure Of An Arachidonic A 2e-91
1fgm_A 839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 2e-91
3bnc_A 839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 2e-91
3bnd_A 839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 3e-91
3bne_A 839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 3e-91
3bnb_A 839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 3e-91
3pzw_A 839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 3e-91
1fgq_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 4e-91
1rov_A 857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 7e-91
1fgo_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 1e-90
2iuk_A 864 Crystal Structure Of Soybean Lipoxygenase-D Length 1e-89
3dy5_A 1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 6e-07
3fg3_A 696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 9e-07
3fg4_A 696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 9e-07
3fg1_A 696 Crystal Structure Of Delta413-417:gs Lox Length = 6 9e-07
2fnq_A 699 Insights From The X-Ray Crystal Structure Of Coral 1e-06
3vf1_A 698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 1e-04
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure 
Iteration: 1

 Score =  336 bits (861), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 180/436 (41%), Positives = 253/436 (58%), Gaps = 14/436 (3%)
Query: 164 NVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQ 222
            + A+   Y A+F  DS+FG PGA  + N  Q EF+L+++ +E     G +HF CNSWV 
Sbjct: 87  TIGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVY 146
Query: 223 STKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDL 282
           ++K +   RIFFAN  YLPSETPA L   RE+ELK++RG G G RK  DRIYDYDVYNDL
Sbjct: 147 NSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDL 206
Query: 283 GNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLP-IYVPRDEQFEES 341
           G+PD+G ++ RP LGG   PYPRR RTGR  T  D       EKP   +Y+PRDE F   
Sbjct: 207 GDPDKGEKYARPVLGGSALPYPRRGRTGRGKTRKD----PNSEKPGDFVYLPRDEAFGHL 262
Query: 342 KQDAFSAGRLKGALHNLIPLLKASISAR--NHDFSGFSDIDSLYSEXXXXXXXXXXXXXX 399
           K   F A  +K    +++P+L  +      + DF  F+++  LY                
Sbjct: 263 KSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYE---GGVTLPTNFLSN 319
Query: 400 XXXXXXVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFP 459
                 +    +   +  LKY  PK++  DK AW+ D+EFAR+ +AG+NP  I+ ++ FP
Sbjct: 320 ITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFP 379
Query: 460 PVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALD 519
             S LD + YG     + +EH+   L G++V+QA++  KL++LD HD  +P+L +INA +
Sbjct: 380 LSSKLDTQAYGDHTCIITKEHLEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKINA-N 438
Query: 520 GRKSYATRTIFFLNSLGTLKPIAIEXXXXXXXXXXX--XKRVLTPAADATSNWLWQLAKA 577
             K+YATRTIFFL + GTL P+AIE                V  P+++    ++W LAKA
Sbjct: 439 TTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKA 498
Query: 578 HVCSNDAGVHQLVNHW 593
           +V  NDA  HQ+++HW
Sbjct: 499 YVVVNDACYHQIISHW 514
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query593
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 1e-177
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-52
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 2e-52
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 4e-47
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 3e-46
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 3e-42
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 1e-40
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 3e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  562 bits (1448), Expect = 0.0
 Identities = 200/505 (39%), Positives = 283/505 (56%), Gaps = 16/505 (3%)

Query: 96  KFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAV 155
             K++  + +    + +      +  D L   +GR+V L+L+           K  ++  
Sbjct: 5   GHKIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTF 63

Query: 156 LKDW-SKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGF-ACGPV 213
           L+   +    + A    +   F  D + G PGA  + N  Q EFFL+++T+E     G +
Sbjct: 64  LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123

Query: 214 HFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRI 273
            F CNSWV +TK +   RIFFAN  Y+PSETPA L + RE+ELK +RG G G RK  DRI
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183

Query: 274 YDYDVYNDLGNPDRGSEFVRPSLGG-EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYV 332
           YDYDVYNDLGNPD+  +  RP LGG    PYPRR RTGR PT TD   E + E     YV
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGE---VFYV 240

Query: 333 PRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--ARNHDFSGFSDIDSLYSEGLLLN 390
           PRDE     K         K     + P  +++    +   +F  F D+  LY  G+ L 
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL- 299

Query: 391 LGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPV 450
              +D +   +PLP +    +   Q +LK+  P ++   + AW+ D+EFAR+ +AGVNP 
Sbjct: 300 --PRDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357

Query: 451 SIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLP 510
            I  L+ FPP SNLDP IYG Q S +  + +   LDG ++ +AL   +L++LD+HDI++P
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSL--DLDGYTMDEALGSRRLFMLDYHDIFMP 415

Query: 511 FLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSG--PSPRSKRVLTPAADATS 568
           ++ +IN L+  K+YATRTI FL   GTLKP+AIELSLP S    S    +V+ PA +   
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475

Query: 569 NWLWQLAKAHVCSNDAGVHQLVNHW 593
           + +W LAKA+V  ND+  HQL++HW
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHW 500
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query593
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 97.88
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 97.88
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 95.31
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=3e-154  Score=1303.30  Aligned_cols=487  Identities=41%  Similarity=0.691  Sum_probs=458.5

Q ss_pred             eEEEEEEEEEecccccccccc----------------------cchhhhhhhhcCCcEEEEEeecccCCCCCCCcccccc
Q 007688           97 FKVRAVLTVRKNIKEDFKETL----------------------VNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREA  154 (593)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~~~~----------------------~~~~d~~~~~~g~~v~lqLvS~~~d~~~g~gk~~~~~  154 (593)
                      .+|||+|+||+|+++++++..                      ++++|++++++|++|+|||||+++||+||+||+|+++
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~   88 (864)
T 2iuk_A            9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV   88 (864)
T ss_dssp             CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCCcc
Confidence            589999999999999999887                      8999999999999999999999999999999999999


Q ss_pred             cccccc-ccCCcCcceeEEEEEEEecCCCCCceEEEEEecCCCceeeeeeEEeecCC-ceEEEEecccccCCCCCCCcce
Q 007688          155 VLKDWS-KKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRI  232 (593)
Q Consensus       155 ~l~~w~-~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~~~~~Ri  232 (593)
                      +|++|+ +++..++++++|+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+||||||+.++|+.+||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~Ri  168 (864)
T 2iuk_A           89 YLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRI  168 (864)
T ss_dssp             ECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCEE
T ss_pred             cccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCCce
Confidence            999999 44557888999999999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             eecccccCcCCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCC-CCCCCCccCCCC
Q 007688          233 FFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGR  311 (593)
Q Consensus       233 FF~nk~yLP~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs-~~PYPRR~RTGR  311 (593)
                      ||+||+|||++||+||++|||+||++|||||+||||+||||||||||||||+||++++  ||||||| +|||||||||||
T Consensus       169 fF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rtgr  246 (864)
T 2iuk_A          169 FFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGR  246 (864)
T ss_dssp             EEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECCCC
T ss_pred             eccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999987  9999998 999999999999


Q ss_pred             CCCCCCccccccCCCCCCcccCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhh--c-CCCCCCCHHhHHHHHhcccc
Q 007688          312 LPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--A-RNHDFSGFSDIDSLYSEGLL  388 (593)
Q Consensus       312 ~p~~~Dp~sEsr~~~~~~~yvPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~--~-~~~~F~sf~Di~~LY~~g~~  388 (593)
                      +|+++||.+|+|.    .+||||||+|+++|++||.+++++|++|.++|+|+++++  . +..+|+||+||++||++|++
T Consensus       247 ~~~~~dp~~e~~~----~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~  322 (864)
T 2iuk_A          247 ERTRTDPNSEKPG----EVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIK  322 (864)
T ss_dssp             CBCSSCTTSBCCC----CCCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEE
T ss_pred             CCCCCCCCccccc----cCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhcccc
Confidence            9999999999995    299999999999999999999999999999999999985  2 57899999999999999999


Q ss_pred             ccccccccccccCCchhhhhhhh-cccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCC
Q 007688          389 LNLGLKDGLLKKLPLPNVVSKIQ-ESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPK  467 (593)
Q Consensus       389 lp~~~~~~~~~~~p~~~~~~~~~-~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~  467 (593)
                      ||+   +.+++.+|+ ++++++. +.++.++|||+|+||+.|+++|++|+|||||+|||+||++|++|++||++|+|||+
T Consensus       323 l~~---~~~~~~~p~-~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~  398 (864)
T 2iuk_A          323 LPT---DILSQISPL-PALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPT  398 (864)
T ss_dssp             CCH---HHHHHHSSC-TTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCHH
T ss_pred             Cch---hhhcccCcH-HHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccCChh
Confidence            997   344554676 6667774 44599999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccHHHHhhhcCCCcHHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecC
Q 007688          468 IYGPQESALKEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSL  547 (593)
Q Consensus       468 ~YG~~~s~IT~e~ie~~l~G~TleeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~  547 (593)
                      +||+++|+||++||+..++|+||+|||++|||||+||||++|||+.++|+++++++|||+||||++++|+|+||||||++
T Consensus       399 ~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqLs~  478 (864)
T 2iuk_A          399 LYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSK  478 (864)
T ss_dssp             HHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             hcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEEeeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC--CCCceEEeCCCCCCCchHHHHHHHHHhhcccceeeeeecC
Q 007688          548 PPSGPS--PRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW  593 (593)
Q Consensus       548 pp~~~~--~~~~~VfTPsd~~~~~~~W~LAKa~v~~aD~~~HQLisHW  593 (593)
                      |+++.+  ++.++||||+|+++++|.|+||||||++||++|||+|+||
T Consensus       479 p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHl  526 (864)
T 2iuk_A          479 PHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHW  526 (864)
T ss_dssp             CCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            865433  3678999999988788999999999999999999999999
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 593
d3bnea1 690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 1e-163
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 8e-55
d2p0ma1 551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 3e-54
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  479 bits (1234), Expect = e-163
 Identities = 159/359 (44%), Positives = 216/359 (60%), Gaps = 13/359 (3%)

Query: 240 LPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGG- 298
           +PSETPA L   RE+ELK +RG G G RK  DRIYDYDVYNDLGNPD+  +  RP LGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 299 EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNL 358
              PYPRR RTGR PT TD   E + E     YVPRDE     K         K     +
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIV 117

Query: 359 IPLLKASISARNH--DFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
            P  +++   ++   +F  F D+  LY  G+ L    +D +   +PLP +    +   Q 
Sbjct: 118 QPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL---PRDVISTIIPLPVIKELYRTDGQH 174

Query: 417 LLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESAL 476
           +LK+  P ++   + AW+ D+EFAR+ +AGVNP  I  L+ FPP SNLDP IYG Q S +
Sbjct: 175 ILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKI 234

Query: 477 KEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLG 536
             + +   LDG ++ +AL   +L++LD+HDI++P++ +IN L+  K+YATRTI FL   G
Sbjct: 235 TADSL--DLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDG 292

Query: 537 TLKPIAIELSLPPSG--PSPRSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593
           TLKP+AIELSLP S    S    +V+ PA +   + +W LAKA+V  ND+  HQL++HW
Sbjct: 293 TLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW 351
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query593
d3bnea1 690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1 551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.41
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 97.03
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 96.01
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 88.48
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 86.84
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=9.2e-114  Score=958.70  Aligned_cols=346  Identities=46%  Similarity=0.782  Sum_probs=328.1

Q ss_pred             CcCCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCC-CCCCCCccCCCCCCCCCCc
Q 007688          240 LPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGRLPTDTDL  318 (593)
Q Consensus       240 LP~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs-~~PYPRR~RTGR~p~~~Dp  318 (593)
                      ||++||+||++|||+||++|||||+||||+||||||||||||||+||++++++||||||+ +|||||||||||+||++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            899999999999999999999999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             cccccCCCCCCcccCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhh--cCCCCCCCHHhHHHHHhcccccccccccc
Q 007688          319 LAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--ARNHDFSGFSDIDSLYSEGLLLNLGLKDG  396 (593)
Q Consensus       319 ~sEsr~~~~~~~yvPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~--~~~~~F~sf~Di~~LY~~g~~lp~~~~~~  396 (593)
                      ++|+|.+   .+||||||+|+++|++||+++++||++|.++|.|+++++  .+.++|+||+||++||++|+++|.   +.
T Consensus        81 ~~e~r~~---~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~---~~  154 (690)
T d3bnea1          81 NTEKQGE---VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR---DV  154 (690)
T ss_dssp             TSBCCCS---SCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCH---HH
T ss_pred             CcccCCC---CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCch---hh
Confidence            9999975   699999999999999999999999999999999999986  467899999999999999999996   45


Q ss_pred             ccccCCchhhhhhhhcccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCccc
Q 007688          397 LLKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESAL  476 (593)
Q Consensus       397 ~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~I  476 (593)
                      +.+.+|++.+.+.+..+++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+||++.||+++++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~i  234 (690)
T d3bnea1         155 ISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKI  234 (690)
T ss_dssp             HHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCCC
T ss_pred             hhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhhh
Confidence            66678887666666677799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHhhhcCCCcHHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCC--CCCC
Q 007688          477 KEEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPS--GPSP  554 (593)
Q Consensus       477 T~e~ie~~l~G~TleeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~--~~~~  554 (593)
                      |+++++  ++|+||+|||++|||||+||||+++|++.++|...+++.||++||||++++|+|+||||||++++.  +..+
T Consensus       235 t~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~~  312 (690)
T d3bnea1         235 TADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSA  312 (690)
T ss_dssp             CGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCCC
T ss_pred             hHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccCC
Confidence            999985  789999999999999999999999999999999999999999999999999999999999999873  3457


Q ss_pred             CCceEEeCCCCCCCchHHHHHHHHHhhcccceeeeeecC
Q 007688          555 RSKRVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW  593 (593)
Q Consensus       555 ~~~~VfTPsd~~~~~~~W~LAKa~v~~aD~~~HQLisHW  593 (593)
                      +.++||||+|+++++|.|+||||||++||++|||+|+||
T Consensus       313 ~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHl  351 (690)
T d3bnea1         313 AVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW  351 (690)
T ss_dssp             CCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhh
Confidence            789999999987778999999999999999999999999
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure