Citrus Sinensis ID: 007732

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-
Protein Sequence
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
markgnqqkngvdrhtsshrkkgsnsgsavpdmagqgrdgkvkvfpgdelpngshsgipsadsssddhhagdesirknnaeasprrekqgtdtrrdlgqsvssetsetiagdstdnissretcgvrienarrgrkhrktglgwslNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKvnqhktdsspeqtsgmqagpsfsngepvhpafsdnvpglsadrspgvpstsgddsemtseDEVVRLLNCTDhysalglsrfenvDVSILKREYRKKAmlvhpdknmgnEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSasqkngrhgffgsgyarseadcddpfgesrriackKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Flexible Loop (DISEMBL)
markgnqqkngvdrhtsshrkkgsnsgsavpdmagqgRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDesirknnaeasprrekqgtdtrrdlgqsvssetsetiagdstdnissretcgvrienarrgrkhrktglgwslnrvhLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVpstsgddsemtsEDEVVRLLNCTDHysalglsrfenvdVSILKREYRKKAmlvhpdknmgnEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRfqsasqkngrhgffGSGYARSEADCDDPFGESRRIACKKCNNFHVWIEtkkskasarWCQVFIFAFCTYMWF
Low Complexity Region (SEG)
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPsadsssddhhagdESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEkvklsvnvvvrslrvyvvPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKflmvlvvaalvaffigfalalvvvalSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWlglllalnlSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Disordered region (IsUnstruct)
*****************************************************************************************************************************************KTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKS***************************************************************VVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHP******EKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQ********HGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMW*
Disordered Region (DISOPRED)
*********************************************************************************************************************************************************MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLK*******************************************************************LLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR***********************FGSGYARSEA********************HVWIETKKSKASARWCQVFIFAFCTYMWF
Disordered Region (DISEMBL)
***********************************QGRDGKVKVFPGDELPNGSHS******************IRKN************************************DNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKV*****************GPSFSNGEPVHPAFSDNVPGLS********************DEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Disordered Region (DISPRO)
********************************************************************************************************************************************LGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKV********************************************************TSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSAS************************GESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPSADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYMWF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	591	2.2.26 [Sep-21-2011]
Q0AIY0	369	Chaperone protein DnaJ OS	yes	no	0.106	0.170	0.553	2e-11
O06431	369	Chaperone protein DnaJ OS	yes	no	0.108	0.173	0.5	1e-10
B1ZUS0	382	Chaperone protein DnaJ OS	yes	no	0.106	0.164	0.523	3e-10
Q5FGQ8	382	Chaperone protein DnaJ OS	yes	no	0.152	0.235	0.424	3e-10
Q5HCG4	382	Chaperone protein DnaJ OS	yes	no	0.152	0.235	0.424	4e-10
Q182E7	384	Chaperone protein DnaJ OS	yes	no	0.106	0.164	0.476	7e-10
Q2GLU9	382	Chaperone protein DnaJ OS	yes	no	0.113	0.175	0.478	8e-10
Q2GI75	380	Chaperone protein DnaJ OS	yes	no	0.152	0.236	0.390	1e-09
A5FZ18	383	Chaperone protein DnaJ OS	yes	no	0.108	0.167	0.5	1e-09
Q2NVZ0	374	Chaperone protein DnaJ OS	yes	no	0.108	0.171	0.454	1e-09

>sp|Q0AIY0|DNAJ_NITEC Chaperone protein DnaJ OS=Nitrosomonas eutropha (strain C91) GN=dnaJ PE=3 SV=1

 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  + D S LK+ YRK AM  HPD+N G+ KA E FK+++ AYEVL DS K
Sbjct: 5   DYYEVLGVGR--DADESELKKVYRKLAMKYHPDRNAGDAKAEERFKEIKEAYEVLSDSNK 62

Query: 501 RKAYD 505
           R AYD
Sbjct: 63  RAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Nitrosomonas eutropha (strain C91) (taxid: 335283)

>sp|O06431|DNAJ_NITEU Chaperone protein DnaJ OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=dnaJ PE=3 SV=2

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           +D+Y  LG+ R  + D + LK+ YRK AM  HPD+N G+ KA E FK ++ AYE+L D  
Sbjct: 4   SDYYEVLGVGR--DADENELKKAYRKLAMKYHPDRNAGDTKAEERFKNIKEAYEILSDPN 61

Query: 500 KRKAYD 505
           KR AYD
Sbjct: 62  KRAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) (taxid: 228410)

>sp|B1ZUS0|DNAJ_OPITP Chaperone protein DnaJ OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=dnaJ PE=3 SV=1

 Score = 67.4 bits (163), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ +        LK+ YRKKA+  HPDKN GN++A E FKK+ +AYEVL D  K
Sbjct: 5   DYYELLGVQK--GASEEELKKAYRKKAVQYHPDKNPGNKEAEEMFKKISHAYEVLKDPEK 62

Query: 501 RKAYD 505
           R AYD
Sbjct: 63  RAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Opitutus terrae (strain DSM 11246 / PB90-1) (taxid: 452637)

>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1

 Score = 67.4 bits (163), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 16/106 (15%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           +D+Y  LGLS+  N     +K+ YRK A+  HPDKN G++ A E FK+L  AY+VL D  
Sbjct: 4   SDYYDLLGLSK--NATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKD 61

Query: 500 KRKAYDDELRREELLDYFRRFQSA-SQKNGRHGF-FGSGYARSEAD 543
           KR AYD            R   SA S  +GR GF F SG++   +D
Sbjct: 62  KRAAYD------------RYGHSAFSDGSGRGGFDFNSGFSTDFSD 95

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Ehrlichia ruminantium (strain Gardel) (taxid: 302409)

>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1

 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 16/106 (15%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           +D+Y  LGLS+  N     +K+ YRK A+  HPDKN G++ A E FK+L  AY+VL D  
Sbjct: 4   SDYYDLLGLSK--NATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKD 61

Query: 500 KRKAYDDELRREELLDYFRRFQSA-SQKNGRHGF-FGSGYARSEAD 543
           KR AYD            R   SA S  +GR GF F SG++   +D
Sbjct: 62  KRAAYD------------RYGHSAFSDGSGRGGFDFNSGFSTDFSD 95

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Ehrlichia ruminantium (strain Welgevonden) (taxid: 254945)

>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +K+ YRK AM  HPD+N G+++A E FK++  AYEVL D  K
Sbjct: 6   DYYEVLGISK--GAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTK 63

Query: 501 RKAYD 505
           RK YD
Sbjct: 64  RKTYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Clostridium difficile (strain 630) (taxid: 272563)

>sp|Q2GLU9|DNAJ_ANAPZ Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ) GN=dnaJ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLF 496
           +   D+Y  LG+SR        +K+ YRKK    HPD+N GN++A E FKK+  AY+VL 
Sbjct: 1   MGSNDYYDLLGVSR--GASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLT 58

Query: 497 DSFKRKAYD 505
           DS KR AYD
Sbjct: 59  DSDKRAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Anaplasma phagocytophilum (strain HZ) (taxid: 212042)

>sp|Q2GI75|DNAJ_EHRCR Chaperone protein DnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1

 Score = 65.5 bits (158), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 15/105 (14%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           +D+Y  LG+S+  +     +K+ YRK A+  HPDKN GN++A E FK+L  AY+VL D  
Sbjct: 4   SDYYDLLGVSK--SATPEEIKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQD 61

Query: 500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGF-FGSGYARSEAD 543
           KR AYD            +   +A   +GR GF F SG++   +D
Sbjct: 62  KRAAYD------------KYGHNAFDSSGRGGFDFNSGFSGDFSD 94

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Ehrlichia chaffeensis (strain Arkansas) (taxid: 205920)

>sp|A5FZ18|DNAJ_ACICJ Chaperone protein DnaJ OS=Acidiphilium cryptum (strain JF-5) GN=dnaJ PE=3 SV=1

 Score = 65.5 bits (158), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           TD+Y  LG+SR  + D   LK+ YRK AM  HPD+N G+  A + FK +  AY+VL D  
Sbjct: 4   TDYYELLGVSRGASADE--LKKAYRKLAMQYHPDRNPGDAAAEQKFKDINEAYDVLKDEQ 61

Query: 500 KRKAYD 505
           KR AYD
Sbjct: 62  KRAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acidiphilium cryptum (strain JF-5) (taxid: 349163)

>sp|Q2NVZ0|DNAJ_SODGM Chaperone protein DnaJ OS=Sodalis glossinidius (strain morsitans) GN=dnaJ PE=3 SV=1

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           +D+Y  LG+SR  + +   +K+ Y+++AM  HPD+N GN +A   FK+++ AYEVL D+ 
Sbjct: 4   SDYYEILGVSR--DAEEREIKKAYKRQAMKFHPDRNRGNAEAEAKFKEIKEAYEVLTDAQ 61

Query: 500 KRKAYD 505
           KR AYD
Sbjct: 62  KRAAYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Sodalis glossinidius (strain morsitans) (taxid: 343509)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	591
255556474	741	conserved hypothetical protein [Ricinus	0.971	0.774	0.632	0.0
296083212	749	unnamed protein product [Vitis vinifera]	0.974	0.769	0.603	0.0
356529091	743	PREDICTED: uncharacterized protein LOC10	0.961	0.764	0.564	0.0
356555977	744	PREDICTED: dnaJ homolog subfamily C memb	0.961	0.763	0.562	0.0
357448821	727	Chaperone protein dnaJ [Medicago truncat	0.945	0.768	0.544	1e-177
225432039	592	PREDICTED: uncharacterized protein LOC10	0.720	0.719	0.686	1e-176
449462182	730	PREDICTED: uncharacterized protein LOC10	0.954	0.772	0.540	1e-164
224112018	579	predicted protein [Populus trichocarpa]	0.705	0.720	0.674	1e-157
15240510	695	chaperone DnaJ-domain containing protein	0.908	0.772	0.487	1e-149
449511895	585	PREDICTED: uncharacterized LOC101205292	0.712	0.719	0.617	1e-145

>gi|255556474|ref|XP_002519271.1| conserved hypothetical protein [Ricinus communis] gi|223541586|gb|EEF43135.1| conserved hypothetical protein [Ricinus communis]

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/587 (63%), Positives = 451/587 (76%), Gaps = 13/587 (2%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQ+NGVDRH S+H+KK ++SG  VPD   +G+  +VKVFPG+E+PNG+    PS
Sbjct: 1   MARKGNQQRNGVDRHASNHKKKVTDSGHVVPDTITRGKVSEVKVFPGEEIPNGNQPSSPS 60

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
            D+    + AGD++  K N+    R++K+  D  RDLG + SS+ +   +GDS  N    
Sbjct: 61  VDNLRRTYTAGDDNKSKQNSGKLQRKDKKWIDQVRDLGDNASSKNN---SGDS--NSPFV 115

Query: 121 ETCGVRIENA-----RRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
           ET G+R EN        G K  + G+ +  N +H++N+ME ++LS NV VR+LR   + T
Sbjct: 116 ETPGIRQENGALPGCESGLKRVRNGVNYLFNGLHIRNVMENMELSGNVAVRNLRTLALST 175

Query: 176 LKAAIELLERQSPMLM---TNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
           LKAA   LER  P+ +   +N+YNA DYV+ KV+Q YPV    L     IMLLLSM+WLD
Sbjct: 176 LKAAGVWLERHRPLFVRVTSNLYNARDYVNMKVEQAYPVVSKWLIQLGNIMLLLSMVWLD 235

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
            T+RGIDSF+R+GTTSFFSVIWCSI+SV+AMVG FKFL+VL +AA V   IG  L L+VV
Sbjct: 236 FTLRGIDSFLRLGTTSFFSVIWCSIMSVLAMVGTFKFLIVLAIAACVGVIIGLTLGLLVV 295

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A SG + LWLYGSFWTT FVI +GGLAF  +HER+AL ITT+YSIYCAW YVGWLGLLLA
Sbjct: 296 AFSGIVFLWLYGSFWTTMFVIIIGGLAFVLSHERVALLITTVYSIYCAWIYVGWLGLLLA 355

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSAD 412
            NLSF+SSD LI+FLK+ +NQ +  +  EQ +G+   P F NGE  HP+F++  PGLS+D
Sbjct: 356 FNLSFLSSDILIYFLKNTINQRRRSNPTEQAAGVDGQPGFFNGESFHPSFTETGPGLSSD 415

Query: 413 RSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHP 472
           RSPGVPSTSG DSE+TSE+EV+RLLNCTDHYS LGLSR+ENVDVS+LKREYRKKAMLVHP
Sbjct: 416 RSPGVPSTSGADSELTSEEEVIRLLNCTDHYSVLGLSRYENVDVSVLKREYRKKAMLVHP 475

Query: 473 DKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGF 532
           DKNMGNEKA EAFKKLQNAYE+L DS KRKAYDDELRREELL+YFRRFQS SQKNG HGF
Sbjct: 476 DKNMGNEKAAEAFKKLQNAYEILLDSLKRKAYDDELRREELLNYFRRFQSTSQKNGAHGF 535

Query: 533 FGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
           F SG+ARSEA+ ++PFGESRRIACKKCNNFHVW+ TKKSK+ ARWCQ
Sbjct: 536 FASGFARSEAEGEEPFGESRRIACKKCNNFHVWVHTKKSKSRARWCQ 582

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083212|emb|CBI22848.3| unnamed protein product [Vitis vinifera]

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/588 (60%), Positives = 434/588 (73%), Gaps = 12/588 (2%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNG+DRH+S+H++K S+SG  VPD   + + G+VK+  G+ELPNG+ +  P 
Sbjct: 1   MARKGNQQKNGLDRHSSNHKRKVSDSGRGVPDTKERVQTGEVKIVAGEELPNGNQASNPL 60

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
            ++++    AGDE   K  +  S R+EKQ  DT   L  SV   ++    G+   N    
Sbjct: 61  TETANKTSSAGDEKKSKQRSGKSLRKEKQEMDTTHGLDHSVPPGSN---PGECAGNQFMT 117

Query: 121 ETCGVRIENA-----RRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
           E   +R EN        G KH     G S N +  +  M+  + S  +VVRSLR   +  
Sbjct: 118 EAFSIREENGTSPRTNNGSKHPSGSSGCSPNGLPSEKAMKNSEFSDTMVVRSLRASALSI 177

Query: 176 LKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
           LKAA E LERQ P  ++    I NA D +  K++Q YP+ L  L +F  IMLLLSM+WLD
Sbjct: 178 LKAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYPIILKWLMYFGNIMLLLSMVWLD 237

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
           CTIRGIDSF+RMGTTSFFSVIWCSI SV+AM+GM KFL++L+V+ L+  F+GF LA +V+
Sbjct: 238 CTIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFLIILIVSVLMGVFLGFTLASLVI 297

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A+SG ++LW+YGSFWTT  +IF GGLAF  +HER AL ITT+YS+YCAWTYVGWLGL++A
Sbjct: 298 AISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALLITTIYSVYCAWTYVGWLGLIVA 357

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDS-SPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSA 411
           LNLSF+SSDALI+ LK+  N+H+  S  PEQT+GM+  P F NGE  H +FS+     + 
Sbjct: 358 LNLSFISSDALIYLLKNTTNEHRRSSRPPEQTAGMRGRPGFFNGEQPHASFSETGSEQAP 417

Query: 412 DRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVH 471
           DRS GV STSG DSE+TSE+EVVRLLNCTDHYSALGLSRFEN+DVS+LKREYRKKAMLVH
Sbjct: 418 DRSAGVTSTSGADSEITSEEEVVRLLNCTDHYSALGLSRFENIDVSLLKREYRKKAMLVH 477

Query: 472 PDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHG 531
           PDKNMGNEKA EAFKKLQNAYEVL DS KRKAYDDELRREELL+ FRRFQ+ASQKNGRHG
Sbjct: 478 PDKNMGNEKAAEAFKKLQNAYEVLLDSLKRKAYDDELRREELLNCFRRFQTASQKNGRHG 537

Query: 532 FFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
            F SG  RSEA+ +DPFGESRRIACKKC NFHVW+ TKK+K+ ARWCQ
Sbjct: 538 PFTSGIPRSEAEVEDPFGESRRIACKKCGNFHVWVHTKKTKSRARWCQ 585

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529091|ref|XP_003533130.1| PREDICTED: uncharacterized protein LOC100812282 [Glycine max]

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/588 (56%), Positives = 417/588 (70%), Gaps = 20/588 (3%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNGVDRH  +++K    SG  +P M   G+ G VKVF  +EL   +  G+  
Sbjct: 1   MARKGNQQKNGVDRHGLNNKK--GVSGGMLPGMKDLGKGGPVKVFLREELAETNCIGV-- 56

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTD-NISS 119
           + ++ D   +GDE   +  +    R+EKQG   + DL      E S    G+S D +++S
Sbjct: 57  SQTACDASSSGDECNNEQRSVKVSRKEKQGMAGKHDL------EESSFFEGNSGDGSLNS 110

Query: 120 RETCGVRIEN-----ARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVP 174
                ++ EN     + +G++  K+ L   L+ +HLK+++EKV+L+ NV++R LR+ V  
Sbjct: 111 EAEASIQEENGTLPRSNQGQQSIKSRLSCILDSLHLKSVVEKVELADNVIIRRLRLLVFS 170

Query: 175 TLKAAIELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWL 231
              A  E L RQ+P+   L T ++ A   V  K    YP+ L  L HF  IMLLLS+ WL
Sbjct: 171 IFTAVSEWLTRQTPLFVSLRTIVFEACHNVRTKFVLAYPIVLKCLMHFGNIMLLLSVFWL 230

Query: 232 DCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVV 291
           DC +RG+DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL VL +AAL+  F+G  LA++V
Sbjct: 231 DCALRGVDSFIRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGCFLGLMLAILV 290

Query: 292 VALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLL 351
           VA+ G I LW YGSFWTT F I LGGL F  +HER+AL ITT+YS+YCA  Y GWLGLLL
Sbjct: 291 VAIIGVITLWFYGSFWTTAFFIILGGLTFMLSHERVALLITTVYSVYCARLYAGWLGLLL 350

Query: 352 ALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSA 411
           A NL+F+SSD LI+FLK  + Q    +  EQ +GM   P FS+ EP H + S+N  G SA
Sbjct: 351 AFNLAFISSDVLIYFLKKNIEQQSRSNPFEQRAGMHGQPGFSD-EPTHASSSENGQGPSA 409

Query: 412 DRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVH 471
           DR+ G+PSTSG DS++TSEDEVVRLLNC+DHY+ALG +R++N+DVSILKREYRKKAMLVH
Sbjct: 410 DRNAGIPSTSGVDSDLTSEDEVVRLLNCSDHYAALGFTRYQNIDVSILKREYRKKAMLVH 469

Query: 472 PDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHG 531
           PDKNMGNEKA EAFKKLQNAYE+L DS KRKAYDDELRREE+L  FRRF  AS+KNGRHG
Sbjct: 470 PDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREEILSVFRRFHDASRKNGRHG 529

Query: 532 FFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
           FF SG+ARS+AD  DPFG+SRRIACK+C  FHVWI TKK K+ ARWCQ
Sbjct: 530 FFPSGFARSDADGKDPFGDSRRIACKRCAGFHVWIHTKKQKSRARWCQ 577

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555977|ref|XP_003546304.1| PREDICTED: dnaJ homolog subfamily C member 14-like [Glycine max]

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/587 (56%), Positives = 418/587 (71%), Gaps = 19/587 (3%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKG QQKNGVDRH  +++K    SG  +P M G G+ G VKVFP + L      G+  
Sbjct: 1   MARKGTQQKNGVDRHGLNNKK--GVSGGVLPGMKGHGKGGPVKVFPREGLAETDSIGV-- 56

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
           + ++ D   +GD+   +  +E    +EKQG   + DL     S + E+ +GD +  ++S 
Sbjct: 57  SQTACDGRSSGDDYNNEQRSEKISGKEKQGMAGKHDL---EESSSFESNSGDGS--LNSE 111

Query: 121 ETCGVRIEN-----ARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPT 175
               ++ EN     + +G++  K+ L   L+ + LK+++EKV+L+ NV++R LR+ V   
Sbjct: 112 AEASIQEENGTLPRSNQGQQSIKSRLSCILDSLLLKSVVEKVELADNVIIRRLRLSVFSI 171

Query: 176 LKAAIELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLD 232
             AA E L R +P+   L T ++   + V  KV Q YPV L  L H   IMLLL + WLD
Sbjct: 172 FTAASEWLNRHTPLFVSLRTIMFETCNTVRTKVVQAYPVVLKWLMHLGNIMLLLLVFWLD 231

Query: 233 CTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVV 292
           C +RG+DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL VL +AAL+ FF+G  LA++VV
Sbjct: 232 CALRGVDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGFFLGLMLAILVV 291

Query: 293 ALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLA 352
           A+ G + LW YGSFWTT F I LGGLAF   HER+AL ITT+YS+YCAW YVGWLGLLLA
Sbjct: 292 AIIGVVTLWFYGSFWTTAFFIILGGLAFMLRHERVALLITTVYSVYCAWLYVGWLGLLLA 351

Query: 353 LNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSAD 412
            N++F+SSD LI+FLK  + Q    +  E  +GM   P FS+ EP H + S+N  G SAD
Sbjct: 352 FNITFISSDVLIYFLKKNIEQQSRSNPFEHRAGMHE-PGFSD-EPTHASSSENGQGPSAD 409

Query: 413 RSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHP 472
           R+ G+PSTSG DS++TSEDEVVRLLNC+DHY+ALG  R++N+DVSILKREYRKKAMLVHP
Sbjct: 410 RNAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGFMRYQNIDVSILKREYRKKAMLVHP 469

Query: 473 DKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGF 532
           DKNMGNEKA EAFKKLQNAYE+L DS KRKAYDDELRREE+L  FRRF  AS+KNGRHGF
Sbjct: 470 DKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREEILSVFRRFNDASRKNGRHGF 529

Query: 533 FGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
           F SG+ARS+AD +DPFG+SRRIACK+C  FHVWI TKK K+ ARWCQ
Sbjct: 530 FPSGFARSDADGEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQ 576

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448821|ref|XP_003594686.1| Chaperone protein dnaJ [Medicago truncatula] gi|124361108|gb|ABN09080.1| Heat shock protein DnaJ [Medicago truncatula] gi|355483734|gb|AES64937.1| Chaperone protein dnaJ [Medicago truncatula]

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 317/582 (54%), Positives = 410/582 (70%), Gaps = 23/582 (3%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQKNG++     HRK GS  G  +P M G    G+VKVFP +EL NG H G+  
Sbjct: 1   MARKGNQQKNGIN-----HRKGGS--GGVLPGMKGH-EGGQVKVFPAEELANGGH-GV-- 49

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQSVSSETSETIAGDSTDNISSR 120
           +  + +   AGD++  +  +E   R++K       DL +S SS  S +  G+    +  +
Sbjct: 50  SQKACEGCSAGDDNNNERKSERFSRKDKH------DLEES-SSFGSNSENGNENVEVPKQ 102

Query: 121 ETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKAAI 180
                R  N  + ++  K+ L   +  + L+ ++E  +L+ +  +R LR+ V+    A  
Sbjct: 103 GHRNFRRRN--QTQQSIKSRLSHLVEGLQLRVLVENSELADHPAIRRLRLSVLSIFTAVT 160

Query: 181 ELLERQSPM---LMTNIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRG 237
           E L RQ P+   + T +  A+     K +Q YP+ L  L HF  I+LLLS+ WLDC +RG
Sbjct: 161 EWLIRQKPLFASIRTTVLEAYANFRTKFKQAYPIVLTWLMHFGSIILLLSVFWLDCAVRG 220

Query: 238 IDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALSGT 297
            DSF+RMGTTSFFSVIWCSI SVI+M+GM KFL+VL +AAL+ FF+GF +A +VVA+ G 
Sbjct: 221 FDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLVVLGLAALIGFFVGFVIAALVVAIIGV 280

Query: 298 ILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSF 357
           ++LW YGSFWTT F+I LGGLAF   HER+AL ITT+YS+YCAW YVGWL L LA NL+F
Sbjct: 281 VMLWFYGSFWTTAFIIILGGLAFMLRHERVALLITTVYSVYCAWLYVGWLRLFLAFNLAF 340

Query: 358 VSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGV 417
           +SSD LI+FLK  ++Q    +  EQ +GM + P F N E +  + S+N PG SADR+ GV
Sbjct: 341 ISSDVLIYFLKKNIDQQSRSNPFEQRAGMNSQPGFGNDESIPSSSSENGPGPSADRNAGV 400

Query: 418 PSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG 477
           PSTSG DS++TSEDEVVRLL+C DHYSALGL+R++++DVS+LKREYRKKAMLVHPDKNMG
Sbjct: 401 PSTSGADSDVTSEDEVVRLLHCFDHYSALGLTRYQDIDVSVLKREYRKKAMLVHPDKNMG 460

Query: 478 NEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGY 537
           NEKAVEAFKKLQNAYE+L DS KRKAYDDELRREE+L+ F RFQ+A ++N RHGFF SG+
Sbjct: 461 NEKAVEAFKKLQNAYEILNDSLKRKAYDDELRREEILNVFNRFQNAPRRNSRHGFFSSGF 520

Query: 538 ARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
             S+AD +DPFGESRRIACK+C  FH+WI TKK K+ ARWCQ
Sbjct: 521 GHSDADGEDPFGESRRIACKRCGGFHLWIHTKKQKSRARWCQ 562

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432039|ref|XP_002280185.1| PREDICTED: uncharacterized protein LOC100246610 [Vitis vinifera]

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/430 (68%), Positives = 349/430 (81%), Gaps = 4/430 (0%)

Query: 154 MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYP 210
           M+  + S  +VVRSLR   +  LKAA E LERQ P  ++    I NA D +  K++Q YP
Sbjct: 1   MKNSEFSDTMVVRSLRASALSILKAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYP 60

Query: 211 VALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFL 270
           + L  L +F  IMLLLSM+WLDCTIRGIDSF+RMGTTSFFSVIWCSI SV+AM+GM KFL
Sbjct: 61  IILKWLMYFGNIMLLLSMVWLDCTIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFL 120

Query: 271 MVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALF 330
           ++L+V+ L+  F+GF LA +V+A+SG ++LW+YGSFWTT  +IF GGLAF  +HER AL 
Sbjct: 121 IILIVSVLMGVFLGFTLASLVIAISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALL 180

Query: 331 ITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQHKTDS-SPEQTSGMQAG 389
           ITT+YS+YCAWTYVGWLGL++ALNLSF+SSDALI+ LK+  N+H+  S  PEQT+GM+  
Sbjct: 181 ITTIYSVYCAWTYVGWLGLIVALNLSFISSDALIYLLKNTTNEHRRSSRPPEQTAGMRGR 240

Query: 390 PSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLS 449
           P F NGE  H +FS+     + DRS GV STSG DSE+TSE+EVVRLLNCTDHYSALGLS
Sbjct: 241 PGFFNGEQPHASFSETGSEQAPDRSAGVTSTSGADSEITSEEEVVRLLNCTDHYSALGLS 300

Query: 450 RFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR 509
           RFEN+DVS+LKREYRKKAMLVHPDKNMGNEKA EAFKKLQNAYEVL DS KRKAYDDELR
Sbjct: 301 RFENIDVSLLKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLLDSLKRKAYDDELR 360

Query: 510 REELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETK 569
           REELL+ FRRFQ+ASQKNGRHG F SG  RSEA+ +DPFGESRRIACKKC NFHVW+ TK
Sbjct: 361 REELLNCFRRFQTASQKNGRHGPFTSGIPRSEAEVEDPFGESRRIACKKCGNFHVWVHTK 420

Query: 570 KSKASARWCQ 579
           K+K+ ARWCQ
Sbjct: 421 KTKSRARWCQ 430

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462182|ref|XP_004148820.1| PREDICTED: uncharacterized protein LOC101205292 [Cucumis sativus]

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 317/586 (54%), Positives = 410/586 (69%), Gaps = 22/586 (3%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKGNQQK G +RH S+ +KKGS+  S      GQGR  ++KVFPG+ELPN +    P 
Sbjct: 1   MARKGNQQKTGSERHASNSKKKGSDLQSK-----GQGRAREIKVFPGEELPNDNQHSRPF 55

Query: 61  ADSS-SDDHHAGDESIRKNNAEASPRREKQGTDTRRDLGQ-SVSSETSETIAGDSTDNIS 118
            +   S D   G ++++K  +  S R+EKQG +      + +  SE SE   G++  +  
Sbjct: 56  EEGMMSSDSGEGLKNLKK--SAKSLRKEKQGIEGLHGPEEPNFPSEESENCDGNNGGSSV 113

Query: 119 SRETCGVRIENARRGRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVPTLKA 178
             +  G    +  + +        + LN  H++++M  +  S NV+V+S    +    +A
Sbjct: 114 GEQYKG---SSGDKDQVQVDGSFSFFLNGEHIRSVMANLNFSDNVLVKSSVESMSSIFEA 170

Query: 179 AIELLERQSPMLMTNIYN---AHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTI 235
           +   LE+  P+L +   N     DYV +K+   YP+ L  + HF  I+LL S++WLDC +
Sbjct: 171 SHVFLEQHRPLLNSLKNNLLNTSDYVVKKIMTAYPIVLKWMMHFGNIILLFSIVWLDCAL 230

Query: 236 RGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVVVALS 295
           RGIDSF+RMGTTSFF+VIW SILS IAMVG  KFL+VLV AA +  F+GFA A++V+A+S
Sbjct: 231 RGIDSFIRMGTTSFFAVIWFSILSTIAMVGFLKFLVVLVAAASLGIFVGFAFAILVIAIS 290

Query: 296 GTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNL 355
           G   LW YG+FW T  +IFLGGLAF  +HER+AL ITT+YS+YCAW   GWLGLLL LNL
Sbjct: 291 GAAFLWFYGNFWMTMLIIFLGGLAFILSHERVALSITTLYSVYCAWVCTGWLGLLLGLNL 350

Query: 356 SFVSSDALIFFLKSKVNQH-KTDSSPEQTSGMQAGPSFSNGEPVHPAFSD-NVPGLSADR 413
           SF+SSDALI+ LK+ +N+H +++  PEQT+GMQ   SFS+ +P+  + S+ +  G +ADR
Sbjct: 351 SFISSDALIYVLKNNMNEHRRSNRYPEQTTGMQDQSSFSHDDPMQTSSSEFSGTGFAADR 410

Query: 414 SPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPD 473
            PG PSTSG DSE++SEDEVVRLLNC+DHY+ALGLSR+EN+D S+LK+EYRKKAMLVHPD
Sbjct: 411 CPGTPSTSGADSEISSEDEVVRLLNCSDHYAALGLSRYENIDTSLLKKEYRKKAMLVHPD 470

Query: 474 KNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFF 533
           KNMGNEKA EAFKKLQNAYEVL DS KRK YDDELRREELL+ FRRFQS SQK+G  GF 
Sbjct: 471 KNMGNEKAAEAFKKLQNAYEVLLDSIKRKTYDDELRREELLNIFRRFQSDSQKSGPFGF- 529

Query: 534 GSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
                RS  + +DPFGESRRIACKKCNNFH+WI T+K K+ ARWCQ
Sbjct: 530 ----PRSATNREDPFGESRRIACKKCNNFHLWIHTRKLKSQARWCQ 571

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112018|ref|XP_002316054.1| predicted protein [Populus trichocarpa] gi|222865094|gb|EEF02225.1| predicted protein [Populus trichocarpa]

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/421 (67%), Positives = 330/421 (78%), Gaps = 4/421 (0%)

Query: 163 VVVRSLRVYVVPTLKAAIELLERQ-SPM--LMTNIYNAHDYVSRKVQQVYPVALNHLGHF 219
           +VV +LR   +  LK A E LERQ  P   L TNIY + DYV  KV + YPV L  L  F
Sbjct: 1   MVVGNLRASALSMLKVAGEWLERQEQPFVSLKTNIYASRDYVKMKVAKAYPVVLKWLLQF 60

Query: 220 AKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALV 279
             I+LLLSM+WLDCT+RG+DSF+R+GTTSFFSVIWCSILSVIAMVG+ K L++L +AA V
Sbjct: 61  GNIVLLLSMVWLDCTLRGMDSFLRLGTTSFFSVIWCSILSVIAMVGISKILIILAIAAFV 120

Query: 280 AFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYC 339
             FIG  L L++VA+SG + LW YGSFWTT FVI + G +F    ERL L I T+YS YC
Sbjct: 121 GVFIGLILGLLIVAISGLVFLWFYGSFWTTVFVIIISGNSFSPFQERLTLLIITIYSTYC 180

Query: 340 AWTYVGWLGLLLALNLSFVSSDALIFFLKSKVN-QHKTDSSPEQTSGMQAGPSFSNGEPV 398
            W+Y GWLGLLLALNLSF+SSD LI+ LK+ +N Q ++  + E ++GM+  P F N +  
Sbjct: 181 VWSYAGWLGLLLALNLSFISSDILIYILKNNINRQRRSGRTSEHSAGMEGRPGFFNEDSF 240

Query: 399 HPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSI 458
           H +  +  PG SADRSPGVPSTSG DSE+TSE+EVVRLLNCTDHYSALGLSR+EN+DVS+
Sbjct: 241 HASSFETGPGFSADRSPGVPSTSGADSELTSEEEVVRLLNCTDHYSALGLSRYENMDVSV 300

Query: 459 LKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFR 518
           LKREYRKKAMLVHPDKNMGNEKA EAFKKLQNAYEVL DS KRKAYDDELRRE+LL+YFR
Sbjct: 301 LKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLLDSLKRKAYDDELRREDLLNYFR 360

Query: 519 RFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWC 578
            FQS SQKNG HG F SG+ARSE D DDPFGESRRIACK+C NFH+WI TKKSK  ARWC
Sbjct: 361 SFQSTSQKNGEHGLFASGFARSEVDGDDPFGESRRIACKRCGNFHLWIHTKKSKLQARWC 420

Query: 579 Q 579
           Q
Sbjct: 421 Q 421

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240510|ref|NP_199769.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|10177624|dbj|BAB10771.1| unnamed protein product [Arabidopsis thaliana] gi|332008449|gb|AED95832.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/589 (48%), Positives = 380/589 (64%), Gaps = 52/589 (8%)

Query: 1   MARKGNQQKNGVDRHTSSHRKKGSNSGSAVPDMAGQGRDGKVKVFPGDELPNGSHSGIPS 60
           MARKG+ QKNG+D  T   +K  S+S   +    GQG++ +                   
Sbjct: 1   MARKGSHQKNGMDNQTKQKKKTASDS---LLSNKGQGKNNE------------------- 38

Query: 61  ADSSSDDHHAGDESIRKNNAEASPRR---EKQGTDTRRDLGQSVSSETSETIAGDSTDNI 117
           A+S   ++   D+  + +    +  R   E +G  + +D+ QSV+SE+   +AG S    
Sbjct: 39  AESVLKENCQDDKQTKSSPVCETLERDMDEAKGAASLKDIDQSVASESD--LAGGS---- 92

Query: 118 SSRETCGVRIENARR---GRKHRKTGLGWSLNRVHLKNMMEKVKLSVNVVVRSLRVYVVP 174
             R   G   E  R    GR+H  + +   L+ +   +  E ++L+ N V+R LR+    
Sbjct: 93  RPRNEPGFTTEETRYIPFGREHIDSVMRSLLDILSTNSPSENIELAYNAVLRKLRISTAT 152

Query: 175 TLKAAIELLERQSPMLMT---NIYNAHDYVSRKVQQVYPVALNHLGHFAKIMLLLSMLWL 231
             +   + +ER  P++ +    +Y   D V  K++QV+PV    L HF  I+LLLS++WL
Sbjct: 153 VSREMTKCMERHRPLIDSVKLRVYKGRDLVLTKMRQVFPVVFRWLMHFGSIILLLSLVWL 212

Query: 232 DCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFALALVV 291
           DC IRG DSF+RMGT SFFS++WC + S  +M GM KF+++ V   LVA FIGF +  V 
Sbjct: 213 DCAIRGFDSFIRMGTASFFSIMWCGLFSAFSMFGMTKFILISVATVLVALFIGFVVGSVT 272

Query: 292 VALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLL 351
           +A+SG +LLWLYGSFWTT   +F GGLAF   HER+ALFI T+YS+Y A +YVGWLGLLL
Sbjct: 273 LAISGLVLLWLYGSFWTTLLFLFFGGLAFMMKHERVALFIITVYSVYSALSYVGWLGLLL 332

Query: 352 ALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSA 411
           A NL+F+S+DALI+F K+K+NQ  T   P               EPV+ +  +N PG   
Sbjct: 333 AFNLAFISTDALIYFFKNKINQQSTADRPT--------------EPVNDSSFENGPGFPG 378

Query: 412 DRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVH 471
           DR PGV STSG DSE+TSEDE+ RLLNC DHYSALGL+R+ NVD++ LKREYRKKAMLVH
Sbjct: 379 DRGPGVASTSGTDSELTSEDEIARLLNCPDHYSALGLARYGNVDMAYLKREYRKKAMLVH 438

Query: 472 PDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGR-H 530
           PDKNMGNE+A EAFKKLQNAYEVL DS K+K+YDDEL+REELL+YFRRFQ++SQK+ R H
Sbjct: 439 PDKNMGNERAAEAFKKLQNAYEVLLDSVKQKSYDDELKREELLNYFRRFQNSSQKDTRGH 498

Query: 531 GFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQ 579
           GF GSG+  SE + ++ F E R+IACKKC N H W  TKKSK++ARWCQ
Sbjct: 499 GFSGSGFGSSEGEGEEAFRECRQIACKKCGNLHAWFLTKKSKSTARWCQ 547

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511895|ref|XP_004164082.1| PREDICTED: uncharacterized LOC101205292 [Cucumis sativus]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/431 (61%), Positives = 329/431 (76%), Gaps = 10/431 (2%)

Query: 154 MEKVKLSVNVVVRSLRVYVVPTLKAAIELLERQSPMLMTNIYN---AHDYVSRKVQQVYP 210
           M  +  S NV+V+S    +    +A+   LE+  P+L +   N     DYV +K+   YP
Sbjct: 1   MANLNFSDNVLVKSSVESMSSIFEASHVFLEQHRPLLNSLKNNLLNTSDYVVKKIMTAYP 60

Query: 211 VALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFL 270
           + L  + HF  I+LL S++WLDC +RGIDSF+RMGTTSFF+VIW SILS IAMVG  KFL
Sbjct: 61  IVLKWMMHFGNIILLFSIVWLDCALRGIDSFIRMGTTSFFAVIWFSILSTIAMVGFLKFL 120

Query: 271 MVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALF 330
           +VLV AA +  F+GFA A++V+A+SG   LW YG+FW T  +IFLGGLAF  +HER+AL 
Sbjct: 121 VVLVAAASLGIFVGFAFAILVIAISGAAFLWFYGNFWMTMLIIFLGGLAFILSHERVALS 180

Query: 331 ITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFLKSKVNQH-KTDSSPEQTSGMQAG 389
           ITT+YS+YCAW   GWLGLLL LNLSF+SSDALI+ LK+ +N+H +++  PEQT+GMQ  
Sbjct: 181 ITTLYSVYCAWVCTGWLGLLLGLNLSFISSDALIYVLKNNMNEHRRSNRYPEQTTGMQDQ 240

Query: 390 PSFSNGEPVHPAFSD-NVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGL 448
            SFS+ +P+  + S+ +  G +ADR PG PSTSG DSE++SEDEVVRLLNC+DHY+ALGL
Sbjct: 241 SSFSHDDPMQTSSSEFSGTGFAADRCPGTPSTSGADSEISSEDEVVRLLNCSDHYAALGL 300

Query: 449 SRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL 508
           SR+EN+D S+LK+EYRKKAMLVHPDKNMGNEKA EAFKKLQNAYEVL DS KRK YDDEL
Sbjct: 301 SRYENIDTSLLKKEYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLLDSIKRKTYDDEL 360

Query: 509 RREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIET 568
           RREELL+ FRRFQS SQK+G  GF      RS  + +DPFGESRRIACKKCNNFH+WI T
Sbjct: 361 RREELLNIFRRFQSDSQKSGPFGF-----PRSATNREDPFGESRRIACKKCNNFHLWIHT 415

Query: 569 KKSKASARWCQ 579
           +K K+ ARWCQ
Sbjct: 416 RKLKSQARWCQ 426

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	591
TAIR|locus:2157804	695	AT5G49580 [Arabidopsis thalian	0.800	0.680	0.482	1.5e-125
TIGR_CMR|ECH_0025	380	ECH_0025 "chaperone protein Dn	0.162	0.252	0.392	1.2e-09
UNIPROTKB|Q9NXW2	375	DNAJB12 "DnaJ homolog subfamil	0.257	0.405	0.345	2.5e-09
TIGR_CMR|APH_0015	382	APH_0015 "chaperone protein Dn	0.113	0.175	0.478	5.8e-09
UNIPROTKB|Q58DR2	370	DNAJB12 "DnaJ homolog subfamil	0.257	0.410	0.345	1.5e-08
MGI|MGI:1931881	376	Dnajb12 "DnaJ (Hsp40) homolog,	0.258	0.406	0.327	2e-08
MGI|MGI:1917854	379	Dnajb14 "DnaJ (Hsp40) homolog,	0.223	0.348	0.333	2e-08
UNIPROTKB|Q87W07	488	hopI1 "Type III effector HopI1	0.187	0.227	0.384	2e-08
WB|WBGene00001019	401	dnj-1 [Caenorhabditis elegans	0.208	0.306	0.352	3.9e-08
UNIPROTKB|O34242	381	dnaJ "Chaperone protein DnaJ"	0.160	0.249	0.345	4.4e-08

TAIR|locus:2157804 AT5G49580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1176 (419.0 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
 Identities = 241/500 (48%), Positives = 308/500 (61%)

Query:    87 EKQGTDTRRDLGQSVSSETSETIAGDSTDNISSRETCGVRIENARR---GRKHRKTGLGW 143
             E +G  + +D+ QSV+SE+   +AG S      R   G   E  R    GR+H  + +  
Sbjct:    68 EAKGAASLKDIDQSVASESD--LAGGSRP----RNEPGFTTEETRYIPFGREHIDSVMRS 121

Query:   144 SLNRVHLKNMMEXXXXXXXXXXXXXXXXXXPTLKAAIELLERQSPMLMT---NIYNAHDY 200
              L+ +   +  E                     +   + +ER  P++ +    +Y   D 
Sbjct:   122 LLDILSTNSPSENIELAYNAVLRKLRISTATVSREMTKCMERHRPLIDSVKLRVYKGRDL 181

Query:   201 VSRKVQQVYPVALNHLGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSV 260
             V  K++QV+PV    L HF  I+LLLS++WLDC IRG DSF+RMGT SFFS++WC + S 
Sbjct:   182 VLTKMRQVFPVVFRWLMHFGSIILLLSLVWLDCAIRGFDSFIRMGTASFFSIMWCGLFSA 241

Query:   261 IAMVGMFKXXXXXXXXXXXXXXXXXXXXXXXXXXSGTILLWLYGSFWTTFFVIFLGGLAF 320
              +M GM K                          SG +LLWLYGSFWTT   +F GGLAF
Sbjct:   242 FSMFGMTKFILISVATVLVALFIGFVVGSVTLAISGLVLLWLYGSFWTTLLFLFFGGLAF 301

Query:   321 KFTHERLALFITTMYSIYCAWTYVGWXXXXXXXXXSFVSSDALIFFLKSKVNQHKTDSSP 380
                HER+ALFI T+YS+Y A +YVGW         +F+S+DALI+F K+K+NQ  T   P
Sbjct:   302 MMKHERVALFIITVYSVYSALSYVGWLGLLLAFNLAFISTDALIYFFKNKINQQSTADRP 361

Query:   381 EQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCT 440
                            EPV+ +  +N PG   DR PGV STSG DSE+TSEDE+ RLLNC 
Sbjct:   362 T--------------EPVNDSSFENGPGFPGDRGPGVASTSGTDSELTSEDEIARLLNCP 407

Query:   441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
             DHYSALGL+R+ NVD++ LKREYRKKAMLVHPDKNMGNE+A EAFKKLQNAYEVL DS K
Sbjct:   408 DHYSALGLARYGNVDMAYLKREYRKKAMLVHPDKNMGNERAAEAFKKLQNAYEVLLDSVK 467

Query:   501 RKAYDDELRREELLDYFRRFQSASQKNGR-HGFFGSGYARSEADCDDPFGESRRIACKKC 559
             +K+YDDEL+REELL+YFRRFQ++SQK+ R HGF GSG+  SE + ++ F E R+IACKKC
Sbjct:   468 QKSYDDELKREELLNYFRRFQNSSQKDTRGHGFSGSGFGSSEGEGEEAFRECRQIACKKC 527

Query:   560 NNFHVWIETKKSKASARWCQ 579
              N H W  TKKSK++ARWCQ
Sbjct:   528 GNLHAWFLTKKSKSTARWCQ 547

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TIGR_CMR|ECH_0025 ECH_0025 "chaperone protein DnaJ" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 44/112 (39%), Positives = 63/112 (56%)

Query:   440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
             +D+Y  LG+S+    +   +K+ YRK A+  HPDKN GN++A E FK+L  AY+VL D  
Sbjct:     4 SDYYDLLGVSKSATPEE--IKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQD 61

Query:   500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGF-FGSGYARSEADC-DDPFG 549
             KR AYD            +   +A   +GR GF F SG++   +D  +D FG
Sbjct:    62 KRAAYD------------KYGHNAFDSSGRGGFDFNSGFSGDFSDIFNDLFG 101

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|Q9NXW2 DNAJB12 "DnaJ homolog subfamily B member 12" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 58/168 (34%), Positives = 83/168 (49%)

Query:   382 QTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTD 441
             QT+G Q  P+ +       A   + P  SA+   G  ST G  +E  +   V R+  C D
Sbjct:    55 QTAGDQPPPTDTTHATHRKAGGTDAP--SANGEAGGESTKGYTAEQVAA--VKRVKQCKD 110

Query:   442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKR 501
             +Y  LG+SR  + D   LK+ YR+ A+  HPDKN     A EAFK +  AY VL +  KR
Sbjct:   111 YYEILGVSRGAS-DED-LKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKR 167

Query:   502 KAYD---DELRREELL-----DYFRRFQS-ASQKNGRHGFFGSGYARS 540
             K YD   D+  +         D+ R F++  S ++  + FFG G+  S
Sbjct:   168 KQYDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSS 215

GO:0016021 "integral to membrane" evidence=IEA

TIGR_CMR|APH_0015 APH_0015 "chaperone protein DnaJ" [Anaplasma phagocytophilum HZ (taxid:212042)]

 Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query:   437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLF 496
             +   D+Y  LG+SR  + +   +K+ YRKK    HPD+N GN++A E FKK+  AY+VL 
Sbjct:     1 MGSNDYYDLLGVSRGASEEE--IKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLT 58

Query:   497 DSFKRKAYD 505
             DS KR AYD
Sbjct:    59 DSDKRAAYD 67

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|Q58DR2 DNAJB12 "DnaJ homolog subfamily B member 12" [Bos taurus (taxid:9913)]

 Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 58/168 (34%), Positives = 81/168 (48%)

Query:   382 QTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTD 441
             Q +G Q  P+ +       A   N    SA+   G  ST G  +E  +   V R+  C D
Sbjct:    55 QPAGDQPQPTEATHTTHRKAAGANTA--SANGEAGGESTKGYTAEQVAA--VKRVKQCKD 110

Query:   442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKR 501
             +Y  LG+SR  + D   LK+ YRK A+  HPDKN     A EAFK +  AY VL +  KR
Sbjct:   111 YYEILGVSRGAS-DED-LKKAYRKLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKR 167

Query:   502 KAYD---DELRREELL-----DYFRRFQS-ASQKNGRHGFFGSGYARS 540
             K YD   D+  +         D+ R F++  S ++  + FFG G+  S
Sbjct:   168 KQYDQFGDDKGQAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSS 215

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1931881 Dnajb12 "DnaJ (Hsp40) homolog, subfamily B, member 12" [Mus musculus (taxid:10090)]

 Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 55/168 (32%), Positives = 79/168 (47%)

Query:   382 QTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLNCTD 441
             Q++G    P+ +       A     P  + +   G  S  G  SE  +   V R+  C D
Sbjct:    55 QSTGDHPQPTDTTHTTTKKAGGTETPSANGEAGGG-ESAKGYTSEQVAA--VKRVKQCKD 111

Query:   442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKR 501
             +Y  LG+SR  + D   LK+ YRK A+  HPDKN     A EAFK +  AY VL +  KR
Sbjct:   112 YYEILGVSRSAS-DED-LKKAYRKLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKR 168

Query:   502 KAYD---DELRREELL-----DYFRRFQS-ASQKNGRHGFFGSGYARS 540
             K YD   D+  +         D+ R F++  S ++  + FFG G+  S
Sbjct:   169 KQYDQFGDDKSQAARHGHSHGDFHRGFEADISPEDLFNMFFGGGFPSS 216

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1917854 Dnajb14 "DnaJ (Hsp40) homolog, subfamily B, member 14" [Mus musculus (taxid:10090)]

 Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 51/153 (33%), Positives = 78/153 (50%)

Query:   384 SGMQAGPSFSNGEPVHPAFSD-NVPGLSADRSPGVPSTSGDDSEMTSEDEVVRLLN---C 439
             +G  AG S    +P  P  SD + P    D + G    +G+  ++ ++D+V  +L+   C
Sbjct:    53 NGSTAGSSTHCRKP--PGSSDQSKPSCGKDGTSG----AGEGGKVYTKDQVEGVLSINKC 106

Query:   440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
              ++Y  LG+++  +     LK+ YRK A+  HPDKN     A +AFKK+ NAY VL +  
Sbjct:   107 KNYYEVLGVTK--DAGDEDLKKAYRKLALKFHPDKNHA-PGATDAFKKIGNAYAVLSNPE 163

Query:   500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGF 532
             KRK YD     E+  ++        Q NGR  F
Sbjct:   164 KRKQYDLTGSEEQACNH--------QNNGRFNF 188

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q87W07 hopI1 "Type III effector HopI1" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 45/117 (38%), Positives = 61/117 (52%)

Query:   393 SNGEPVHPAFSDNVPGLSADR-SPGVPS-TSGDDSEMTSEDEVVRLLNCTDHYSALGLSR 450
             +N  P  P  ++  P    +R S   P+ TS  D+     D           Y  LGL+ 
Sbjct:   365 ANSAPPPPPKAE--PSAGGERPSTARPNNTSAADASARVGDSAPAKPPVKPLYEHLGLTD 422

Query:   451 FENVDVSILKREYRKKAMLVHPDKNMGNE-KAVEAFKKLQNAYEVLFDSFKRKAYDD 506
               +VD+S +K+ YR  AM  HPDKN GNE +A E FK + NAY++L D   RKAYD+
Sbjct:   423 M-SVDLSAVKKAYRDAAMKNHPDKNRGNEAEAAERFKVISNAYKILSDPELRKAYDN 478

GO:0009405 "pathogenesis" evidence=ISS

WB|WBGene00001019 dnj-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 156 (60.0 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 48/136 (35%), Positives = 71/136 (52%)

Query:   410 SADRSPGVPSTSGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAML 469
             SA R+P +    G D     ++ V R+ +C D+Y  L + +  + D   +++EYRK A+ 
Sbjct:   110 SASRTPKL----GVDYTSEQKELVERIRHCKDYYEILKIDKKASDDD--IRKEYRKLALK 163

Query:   470 VHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGR 529
             +HPDK      A EAFK L NAY VL D+ KR+ YD +   E    +     +  ++ G 
Sbjct:   164 LHPDKCRAPH-ATEAFKALGNAYAVLSDTDKRRQYD-QYGAEAANSHT---PTTRRRGGG 218

Query:   530 HG-FFGSGYARS-EAD 543
             HG FF   YA   EA+
Sbjct:   219 HGAFFEHDYAHGFEAE 234

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

UNIPROTKB|O34242 dnaJ "Chaperone protein DnaJ" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 155 (59.6 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 38/110 (34%), Positives = 58/110 (52%)

Query:   441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
             D Y  LG+ R  +     +K+ Y++ AM  HPD+N G+  A E FK+++ AYE+L D+ K
Sbjct:     5 DFYEVLGVGR--DASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQK 62

Query:   501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 550
             + AYD             ++  A+ + G  GF G G+    AD  D FG+
Sbjct:    63 KAAYD-------------QYGHAAFEQGAGGFGGGGFGGGGADFGDIFGD 99

GO:0006457 "protein folding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1.27	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00033182001 SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (747 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	591
pfam00226	63	pfam00226, DnaJ, DnaJ domain	4e-22
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	1e-17
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	4e-16
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	7e-16
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	8e-16
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	7e-14
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	5e-13
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	4e-12
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	6e-12
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	8e-12
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-11
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-11
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-11
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	5e-11
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-10
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-10
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	5e-10
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	6e-10
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-09
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	3e-09
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	8e-09
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	8e-09
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	1e-08
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-08
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	2e-08
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	2e-08
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	3e-08
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	5e-08
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	2e-07
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	2e-07
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	2e-06
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-06
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	3e-06
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-05
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	3e-05
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	1e-04
pfam07698	189	pfam07698, 7TM-7TMR_HD, 7TM receptor with intracel	2e-04
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	4e-04
COG0658	453	COG0658, ComEC, Predicted membrane metal-binding p	0.002
pfam12730	230	pfam12730, ABC2_membrane_4, ABC-2 family transport	0.002
cd00919	463	cd00919, Heme_Cu_Oxidase_I, Heme-copper oxidase su	0.003
pfam01148	259	pfam01148, CTP_transf_1, Cytidylyltransferase fami	0.003
pfam12822	168	pfam12822, DUF3816, Protein of unknown function (D	0.003
cd06912	193	cd06912, GT_MraY_like, This subfamily is composed	0.004
COG1284	289	COG1284, COG1284, Uncharacterized conserved protei	0.004

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 89.5 bits (223), Expect = 4e-22
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  +     +K+ YRK A+  HPDKN G+  A E FK++  AYEVL D  K
Sbjct: 1   DYYEILGVPR--DASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEK 58

Query: 501 RKAYD 505
           R  YD
Sbjct: 59  RAIYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 76.8 bits (190), Expect = 1e-17
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFD 497
           D+Y  LG+    +     +K+ YRK A+  HPDKN  + +A E FK++  AYEVL D
Sbjct: 1   DYYDILGVPP--DASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 72.3 bits (178), Expect = 4e-16
 Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDS 498
           TD+Y  LG+ R  +  +  +K+ YRK A+  HPDKN G+ E+A E FK++  AYEVL D 
Sbjct: 1   TDYYEILGVPR--DASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDP 58

Query: 499 FK 500
            K
Sbjct: 59  EK 60

Length = 60

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 79.2 bits (196), Expect = 7e-16
 Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 17/111 (15%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
            D+Y  LG+S+  +     +K+ YRK A   HPD+N G+++A E FK++  AYEVL D  
Sbjct: 4   RDYYEILGVSK--DASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 550
           KR AYD             +F  A  K G  GF G G+     D  D F +
Sbjct: 62  KRAAYD-------------QFGHAGFKAG--GFGGFGFGGFGGDFGDIFED 97

Length = 371

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 79.0 bits (196), Expect = 8e-16
 Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 19/117 (16%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR  N     +K+ YRK AM  HPD+N G+++A E FK+++ AYEVL D  K
Sbjct: 5   DYYEVLGVSR--NASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQK 62

Query: 501 RKAYDDELRREELLDYFRRF-QSASQKNGRHGFFGSGYARSEADCD---DPFGESRR 553
           R AYD             ++  +A ++ G  G FG G    +   D   D FG  R 
Sbjct: 63  RAAYD-------------QYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGRG 106

Length = 371

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 73.2 bits (180), Expect = 7e-14
 Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D Y  LG+S   +     +K+ YRK A  +HPD N G+  A E FK +  A++VL D  K
Sbjct: 10  DFYKELGVS--SDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFG 549
           RK Y DE RR      F   +      G  G FG+G   +E + +D F 
Sbjct: 68  RKEY-DETRRLFAGGGFGGRRFDG--GGGFGGFGTGGDGAEFNLNDLFD 113

Length = 392

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 70.3 bits (173), Expect = 5e-13
 Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 19/113 (16%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+  +     +K+ YRK A   HPD+N  +++A E FK++  AYEVL D  K
Sbjct: 1   DYYEILGVSK--DASEEEIKKAYRKLAKKYHPDRN-KDKEAEEKFKEINEAYEVLSDPEK 57

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHG---FFGSGYARSEADCDDPFGE 550
           R  YD             +F  A    G  G    F         D  D FG+
Sbjct: 58  RAQYD-------------QFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGD 97

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+   VD   +K+ YRKKA+  HPDKN G+++A E FK+   AY+VL D  K
Sbjct: 6   DYYEVLGVSKTATVDE--IKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDK 63

Query: 501 RKAYD 505
           R  YD
Sbjct: 64  RSRYD 68

Length = 386

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 67.1 bits (164), Expect = 6e-12
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR  + D   +K+ YRK A+  HPDKN  N++A E FK++  AYEVL +  K
Sbjct: 4   DYYEVLGVSRSADKDE--IKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 501 RKAYD 505
           R+ YD
Sbjct: 62  RRRYD 66

Length = 397

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 66.7 bits (163), Expect = 8e-12
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 27/110 (24%)

Query: 441 DHYSALGLSRFENVDVSI--LKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDS 498
           D+Y  LG++R    D S   +K+ YRK AM  HPD+N G+++A E FK+   AYEVL D 
Sbjct: 5   DYYEILGVTR----DASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDP 60

Query: 499 FKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPF 548
            KR  YD                    + G  G  G+G++   +  DD F
Sbjct: 61  KKRGIYD--------------------QYGHEGLSGTGFSGF-SGFDDIF 89

Length = 366

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 16/97 (16%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGL +  + D   +K+ +RK A+  HPDKN GN++A E FK++  AY+VL D  K
Sbjct: 5   DYYEVLGLEKGASDDE--IKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQK 62

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGY 537
           +  YD             +F +A   NG  GF   G+
Sbjct: 63  KAQYD-------------QFGTAD-FNGAGGFGSGGF 85

Length = 380

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 21/113 (18%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR  +     +K+ YRK A+  HPD+N  N +A + FK+   AYEVL D+ K
Sbjct: 5   DYYEVLGVSR--DASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEK 62

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSE---ADCDDPFGE 550
           R  YD             RF  A      +G FG G++ +E   +   D FG+
Sbjct: 63  RARYD-------------RFGHAGV--NGNGGFG-GFSSAEDIFSHFSDIFGD 99

Length = 373

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 65.6 bits (160), Expect = 2e-11
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 15/102 (14%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
            D+Y+ LG+S+        +K+ YRK A+  HPDKN G+ +A + FK++  AYEVL D+ 
Sbjct: 1   MDYYTILGVSK--TASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQ 58

Query: 500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSE 541
           KR++YD             R+       G  GF G+G    E
Sbjct: 59  KRESYD-------------RYGKDGPFAGAGGFGGAGMGNME 87

Length = 391

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 64.4 bits (157), Expect = 5e-11
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 31/129 (24%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  N     +K+ YR+ A   HPD N G+++A + FK++  AYE+L D  K
Sbjct: 6   DYYEILGVDR--NATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQK 63

Query: 501 RKAYDDELRREELLDYFRRFQSAS---QKNGRHGFFGSGYARSEADCD------------ 545
           R  YD             +F  A+      G+ GF   G+     D D            
Sbjct: 64  RAQYD-------------QFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIF 110

Query: 546 -DPFGESRR 553
            D FG  RR
Sbjct: 111 GDFFGTGRR 119

Length = 386

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGLS+  + D   +K+ YRK A+  HPDKN GN++A   FK+   AYEVL D  K
Sbjct: 4   DYYEILGLSKGASKDE--IKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNK 61

Query: 501 RKAYD 505
           R  YD
Sbjct: 62  RAQYD 66

Length = 365

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 19/109 (17%)

Query: 442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKR 501
           +Y  LG+S+  N +   +K  YRK A+  HPDKN GN+++ E FK+   AYE+L D  KR
Sbjct: 6   YYDILGVSKSANDEE--IKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKR 63

Query: 502 KAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 550
           +AYD             +F  A    G  GF    Y     D  D FG+
Sbjct: 64  QAYD-------------QFGKAGVNAGAGGFGQGAY----TDFSDIFGD 95

Length = 372

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 61.4 bits (149), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ +        +K+ YRK A   HPD N G+ KA E FK++  AY+VL D  K
Sbjct: 10  DYYKVLGVPKDATEAE--IKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 501 RKAYDD 506
           RK YD+
Sbjct: 68  RKEYDE 73

Length = 389

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 60.8 bits (148), Expect = 6e-10
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
            D+Y  LG+SR  N   + +KR YRK A  +HPD N  +E+A E FK++  AYEVL D  
Sbjct: 3   RDYYGLLGVSR--NASDAEIKRAYRKLARELHPDVN-PDEEAQEKFKEISVAYEVLSDPE 59

Query: 500 KRKAYD 505
           KR+  D
Sbjct: 60  KRRIVD 65

Length = 378

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 58.3 bits (140), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKN-MGNEKAVEAFKKLQNAYEVLF 496
           +  D+Y  LG+         I K+ YRK A+  HPD+N    + A E FK++  AYE+L 
Sbjct: 4   DLLDYYEILGVPPNA-SLEEI-KKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILS 61

Query: 497 DSFKRKAYD 505
           D  +R  YD
Sbjct: 62  DPERRAEYD 70

Length = 237

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 58.6 bits (142), Expect = 3e-09
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLF 496
           +N T++Y  LG+S+  +     +K+ YRK +   HPD N     A E +K++Q AYE L 
Sbjct: 1   MNNTEYYDRLGVSK--DASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLS 57

Query: 497 DSFKRKAYD 505
           D  KR AYD
Sbjct: 58  DPQKRAAYD 66

Length = 380

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 57.5 bits (139), Expect = 8e-09
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  N D   +K+ YRK A   HPD +   E A E FK++  AY VL D  K
Sbjct: 6   DYYEVLGVDR--NADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEK 62

Query: 501 RKAYD 505
           R+ YD
Sbjct: 63  RQRYD 67

Length = 378

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 57.5 bits (139), Expect = 8e-09
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-AVEAFKKLQNAYEVLFDSF 499
           D+Y  LG+SR  N     +KR Y++     HPD++  N K A + FK++Q AYEVL D  
Sbjct: 5   DYYEILGVSR--NATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQ 62

Query: 500 KRKAYD 505
           KR  YD
Sbjct: 63  KRAMYD 68

Length = 369

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR  + D   +K  YRK A+  HPD+N   + A E F ++  AY VL D+ K
Sbjct: 3   DYYELLGVSRTASADE--IKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEK 59

Query: 501 RKAYD 505
           R  YD
Sbjct: 60  RAHYD 64

Length = 371

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGLS+  +  V  +K+ YRK AM  HPDKN     A E FK++  AY VL D+ K
Sbjct: 6   DYYEILGLSK--DASVEDIKKAYRKLAMKYHPDKN-KEPDAEEKFKEISEAYAVLSDAEK 62

Query: 501 RKAYD 505
           R  YD
Sbjct: 63  RAQYD 67

Length = 377

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 56.3 bits (136), Expect = 2e-08
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR  N     +K+ YR+ A   HPD N  N +A E FK++  AY+VL D  K
Sbjct: 4   DYYEILGVSR--NATQEEIKKAYRRLARKYHPDFN-KNPEAEEKFKEINEAYQVLSDPEK 60

Query: 501 RKAYD 505
           RK YD
Sbjct: 61  RKLYD 65

Length = 382

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+  + D   +K+ YRK +   HPD N   E A E FK++  AYEVL D  K
Sbjct: 5   DYYEVLGVSKSASKDE--IKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQK 61

Query: 501 RKAYD 505
           R  YD
Sbjct: 62  RAQYD 66

Length = 376

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 55.4 bits (134), Expect = 3e-08
 Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 7/67 (10%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPD--KNMGNEKAVEAFKKLQNAYEVLFDS 498
           D+Y  LG+SR  + D   LKR YR+ A   HPD  K  G E   + FK++  AYEVL D 
Sbjct: 4   DYYEILGVSR--DADKDELKRAYRRLARKYHPDVNKEPGAE---DRFKEINRAYEVLSDP 58

Query: 499 FKRKAYD 505
             R  YD
Sbjct: 59  ETRARYD 65

Length = 374

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 55.2 bits (133), Expect = 5e-08
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 6/64 (9%)

Query: 443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRK 502
           Y  L LS+  +   S +K+ YRK A+  HPDK    EK    FK++  AYEVL D  KRK
Sbjct: 31  YEVLNLSK--DCTTSEIKKAYRKLAIKHHPDKGGDPEK----FKEISRAYEVLSDPEKRK 84

Query: 503 AYDD 506
            YD+
Sbjct: 85  IYDE 88

Length = 421

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-KAVEAFKKLQNAYEVLFDSF 499
           D+Y  LG+ R  N     +K+ +R+ A   HPD + GN+ +A E FK++  AYEVL D  
Sbjct: 4   DYYKILGVDR--NASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQ 61

Query: 500 KRKAYDD 506
           KR+ YD 
Sbjct: 62  KRRQYDQ 68

Length = 365

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 53.2 bits (127), Expect = 2e-07
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKR 501
           +Y  L + +  N +   +K+ YRK A+  HPD+N G+++A E FK +  AY VL D  KR
Sbjct: 5   YYEILEVEKHSNQET--IKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKR 62

Query: 502 KAYD 505
             YD
Sbjct: 63  ALYD 66

Length = 369

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 441 DHYSALGLSRFE-NVDVSILKREYRKKAMLVHPDKNM--GNEKAVEAFKKLQNAYEVLFD 497
           D Y+ LGLS++        + + ++KK    HPDK    GN+   E FK +Q A EVL D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 498 SFKRKAYD 505
              R  YD
Sbjct: 104 RKLRLQYD 111

Length = 379

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y+ LG+ +  N     +K+ ++K A   HPD N     A E FK++  AY VL D  K
Sbjct: 5   DYYAILGVPK--NASQDEIKKAFKKLARKYHPDVNKSPG-AEEKFKEINEAYTVLSDPEK 61

Query: 501 RKAYD 505
           R+ YD
Sbjct: 62  RRIYD 66

Length = 291

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 50.2 bits (119), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  + D   +K+ +RK A   HPD+N   + A   F ++  A +VL +  K
Sbjct: 3   DYYEVLGIDR--DADEQEIKKAFRKLAKKYHPDRNKAPD-AASIFAEINEANDVLSNPKK 59

Query: 501 RKAYD----DELRREELLDY 516
           R  YD    D + RE+  D+
Sbjct: 60  RANYDKYGHDGVDREDDFDF 79

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 16/110 (14%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+  +   + LK+ Y K A   HPD     + A + FK++  AY+VL D  K
Sbjct: 4   DYYQILGVSKTASQ--ADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQK 60

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 550
           R AYD         D F + Q +    G HG F         D +D FG+
Sbjct: 61  RAAYDRFGH-----DAF-QNQQSRGGGGNHGGFH-------PDINDIFGD 97

Length = 372

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 46.5 bits (110), Expect = 3e-05
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  N  V  +K+ YRK A   HPD N     A + FK+++ AY+ L D  K
Sbjct: 5   DYYEVLGVDR--NASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQK 61

Query: 501 RKAYD 505
           +  YD
Sbjct: 62  KAHYD 66

Length = 371

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA-FKKLQNAYEVLFDSF 499
           D+Y+ +G+   +  D+  +K  YR+ A   HPD  +  E   EA FK++  A+EVL D  
Sbjct: 5   DYYAIMGVKPTD--DLKTIKTAYRRLARKYHPD--VSKEPDAEARFKEVAEAWEVLSDEQ 60

Query: 500 KRKAYDDELRREELLDYFRRF--QSASQKNGRHGF 532
           +R  Y D+L +      F R       Q      F
Sbjct: 61  RRAEY-DQLWQHRNDPQFNRQFQHGDGQSFNAEDF 94

Length = 306

>gnl|CDD|219524 pfam07698, 7TM-7TMR_HD, 7TM receptor with intracellular HD hydrolase

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 15/158 (9%)

Query: 216 LGHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVLVV 275
           LG F  ++LLL +L L       +   R       S+I    L +  ++ +     ++ +
Sbjct: 5   LGLFLLVLLLLGVLLLYLRRFRPELRKRNKKLLLLSLILILSLLLAKLISLISIPYLVPL 64

Query: 276 AA---LVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVI-FLGGLAFKFTHERLALFI 331
           AA   L+A  +G  LALVV  L   +LL L       F +   LGGL         AL +
Sbjct: 65  AAAPMLLAILLGSRLALVVSVL-LALLLGLMFGNNLEFLLYALLGGLV-------GALSV 116

Query: 332 TTMYS---IYCAWTYVGWLGLLLALNLSFVSSDALIFF 366
             + S   +  A   V  + +LL L L  +   +  + 
Sbjct: 117 RRLRSRSQLLQAGLLVALVNVLLYLALGLIQGGSFSWL 154

These bacterial 7TM receptor proteins have an intracellular pfam01966. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain. Length = 189

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+        +++ YRK A   HPD N   + A +   ++  A +VL D  K
Sbjct: 5   DYYEVLGVSK--TASEQEIRQAYRKLAKQYHPDLNKSPD-AHDKMVEINEAADVLLDKDK 61

Query: 501 RKAYD 505
           RK YD
Sbjct: 62  RKQYD 66

Length = 372

>gnl|CDD|223731 COG0658, ComEC, Predicted membrane metal-binding protein [General function prediction only]

 Score = 40.9 bits (96), Expect = 0.002
 Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 18/164 (10%)

Query: 218 HFAKIMLLLSMLWLDCTI-RGIDSFMRMGTTSFFSVIWCSIL-SVIAMVGMFKFLMVLVV 275
           H A +      L        G    + +G  + F  I      SV+  + M   L +L  
Sbjct: 248 HVALLAGTFLFLLRRLGRWIGPALPLLLGLLALFYAILTGFSPSVLRALVM-LALALLAS 306

Query: 276 AALVAFFIGFALALVVVALSGTILLWLYG-SFWTTFFVIF--LGGLAFKFTHERLALFIT 332
            +L      F L L  +A+     L +    FW +F  +   +                 
Sbjct: 307 LSLRNLSSIFILLLSAIAILLLAPLAILSLGFWLSFLAVAALILWSQLFRLLGLSWPLPI 366

Query: 333 TMYSIYCAWT---------YVGWLGLLLALNLSFVSSDALIFFL 367
           T   +    T          +G LGLLL L +S + S   +  L
Sbjct: 367 T---LALLATLPLLILQFGRLGLLGLLLNLIVSPLISLISLPGL 407

Length = 453

>gnl|CDD|221739 pfam12730, ABC2_membrane_4, ABC-2 family transporter protein

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 6/118 (5%)

Query: 222 IMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFKFLMVL--VVAALV 279
           I +L S+L       G    +     S   +    +L ++ +  +   L++L  ++A L+
Sbjct: 61  IAILASLLVSREFKNGTIKLLLSLPISRGKIFLAKLLVLLILSLLASLLLLLLSLIAGLL 120

Query: 280 AFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSI 337
               GF+L+L++ AL   +LL L         ++ +  L+    +  +A+ I  +  +
Sbjct: 121 LGGSGFSLSLLLGALLLLLLLSLL----ALLLILLILFLSLLLRNSAVAIGIGLLLIL 174

This family is related to the ABC-2 membrane transporter family pfam01061. Length = 230

>gnl|CDD|238461 cd00919, Heme_Cu_Oxidase_I, Heme-copper oxidase subunit I

 Score = 40.2 bits (95), Expect = 0.003
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 10/71 (14%)

Query: 256 SILSVIAMV---------GMFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSF 306
           SIL  I  +         GM    M L V +++   I   LAL V+A    ++L L  +F
Sbjct: 145 SILGAINFITTILNMRAPGMTLDKMPLFVWSVLVTAILLLLALPVLAA-ALVMLLLDRNF 203

Query: 307 WTTFFVIFLGG 317
            T+FF    GG
Sbjct: 204 GTSFFDPAGGG 214

Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is diverse in terms of electron donors, subunit composition, and heme types. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria. Membership in the superfamily is defined by subunit I, which contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons to the binuclear center. Only subunit I is common to the entire superfamily. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from the electron donor on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I of cytochrome c oxidase (CcO) and ubiquinol oxidase. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electron transfer occurs in two segments: from the electron donor to the low-spin heme, and from the low-spin heme to the binuclear center. The first segment can be a multi-step process and varies among the different families, while the second segment, a direct transfer, is consistent throughout the superfamily. Length = 463

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 6/124 (4%)

Query: 249 FFSVIWCSILSVIAMVG-----MFKFLMVLVVAALVAFFIGFALALVVVALSGTILLWLY 303
           F  +++   L  + +V          L+ L+     +  +     L ++     +LL   
Sbjct: 14  FLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSSRLLLLTRGLGLIFYLLGLLLVYG 73

Query: 304 GSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDAL 363
                 F ++ L           +  +     ++   + YVG    LL +   F      
Sbjct: 74  EGLLALFGLVLLVIPVLWLLVLPVLAYHRVSSTLLPLF-YVGLFLSLLLITNPFFGLLWA 132

Query: 364 IFFL 367
           +  +
Sbjct: 133 LLLI 136

The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108. Length = 259

>gnl|CDD|221791 pfam12822, DUF3816, Protein of unknown function (DUF3816)

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 13/118 (11%)

Query: 256 SILSVIAMVGMF------KFLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTT 309
           ++LS +++V M+      K     +   L AF +G     ++  L+  +L +L       
Sbjct: 7   ALLSALSIVLMYIPFPPLKIDFSHIPVLLGAFLLGPVAGALIGLLTS-LLSFLLFGGGPF 65

Query: 310 FFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLLLALNLSFVSSDALIFFL 367
             V  L             LF      IY           +LA+ L  +    +   L
Sbjct: 66  ALVGPLANFLP------RILFGLIAGLIYKKLRKKTKKRAVLAIILGTILGTLVATLL 117

This family of proteins is functionally uncharacterized but are likely to be membrane transporters. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 177 and 208 amino acids in length. A subset of this family is associated with the TM1506 proteins. In this context, transport through the channel is predicted to be regulated by the TM1506 protein by either regulating redox potential or modification of substrates. Length = 168

>gnl|CDD|133467 cd06912, GT_MraY_like, This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 249 FFSVIWCSILSVIAMVGMFKFLMVLVVAALVAFFIGFA----------LALVVVALSGTI 298
           F  ++      ++  +     L++L++AAL AF  G            + L+   LS  +
Sbjct: 20  FLGLL---AGLLLLSLLSGSLLLLLLLAALPAFLAGLLEDITKRVSPRIRLLATFLSALL 76

Query: 299 LLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITT 333
            +WL G    +   + L GL    +    A+  T 
Sbjct: 77  AVWLLG---ASITRLDLPGLDLLLSFPPFAIIFTI 108

This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The prokaryotic enzyme-catalyzed reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Length = 193

>gnl|CDD|224203 COG1284, COG1284, Uncharacterized conserved protein [Function unknown]

 Score = 39.1 bits (92), Expect = 0.004
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 15/104 (14%)

Query: 257 ILSVIAMVGMFKFLMVLVVAALVA-----FFIGFALALV-VVALSGTILLWLYG--SFWT 308
           I S++ +    K L++++ A + A     F I  ALA   V  LS  ILL L+G   F  
Sbjct: 4   IKSILPLKKAKKLLIIIIGAGIYAFGLNLFLIPNALASGGVTGLS-LILLALFGIPPFGL 62

Query: 309 TFFV--IFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLGLL 350
           TFF+  I L  L +K     +    T + +I        +L L 
Sbjct: 63  TFFLLNIPLFILGYKK----IGKRFTLLSTIIGVLLLSLFLWLF 102

Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	591
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	100.0
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.95
PRK14296	372	chaperone protein DnaJ; Provisional	99.89
PRK14288	369	chaperone protein DnaJ; Provisional	99.88
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.88
PRK14286	372	chaperone protein DnaJ; Provisional	99.88
PRK14279	392	chaperone protein DnaJ; Provisional	99.87
PRK14282	369	chaperone protein DnaJ; Provisional	99.86
PRK14287	371	chaperone protein DnaJ; Provisional	99.86
PRK14277	386	chaperone protein DnaJ; Provisional	99.85
PRK14285	365	chaperone protein DnaJ; Provisional	99.85
PRK14295	389	chaperone protein DnaJ; Provisional	99.85
PRK14294	366	chaperone protein DnaJ; Provisional	99.85
PRK14297	380	chaperone protein DnaJ; Provisional	99.85
PRK14278	378	chaperone protein DnaJ; Provisional	99.85
PRK14276	380	chaperone protein DnaJ; Provisional	99.84
PRK14283	378	chaperone protein DnaJ; Provisional	99.84
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.84
PRK14298	377	chaperone protein DnaJ; Provisional	99.84
PRK14301	373	chaperone protein DnaJ; Provisional	99.84
PRK14280	376	chaperone protein DnaJ; Provisional	99.84
PRK10767	371	chaperone protein DnaJ; Provisional	99.84
PRK14291	382	chaperone protein DnaJ; Provisional	99.84
PRK14284	391	chaperone protein DnaJ; Provisional	99.84
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.84
PRK14289	386	chaperone protein DnaJ; Provisional	99.83
PRK14281	397	chaperone protein DnaJ; Provisional	99.82
PRK14290	365	chaperone protein DnaJ; Provisional	99.82
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.81
PRK14300	372	chaperone protein DnaJ; Provisional	99.81
PRK14293	374	chaperone protein DnaJ; Provisional	99.8
PRK14292	371	chaperone protein DnaJ; Provisional	99.8
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.76
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.69
PRK14299	291	chaperone protein DnaJ; Provisional	99.68
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.68
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.67
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.65
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.61
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.57
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.56
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.56
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.55
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.53
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.52
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.46
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.41
PRK05014	171	hscB co-chaperone HscB; Provisional	99.41
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.41
PRK01356	166	hscB co-chaperone HscB; Provisional	99.39
PHA03102	153	Small T antigen; Reviewed	99.38
PRK03578	176	hscB co-chaperone HscB; Provisional	99.38
PRK00294	173	hscB co-chaperone HscB; Provisional	99.37
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.31
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.24
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	99.2
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.2
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.1
PTZ00100	116	DnaJ chaperone protein; Provisional	99.08
PRK01773	173	hscB co-chaperone HscB; Provisional	99.01
PHA02624	647	large T antigen; Provisional	99.0
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.85
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	98.84
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.59
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.23
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	97.6
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.32
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.0
PF14901	94	Jiv90: Cleavage inducing molecular chaperone	96.57
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.18
KOG0431	453	consensus Auxilin-like protein and related protein	95.89
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.39
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	90.97
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	90.66
PF09605	186	Trep_Strep: Hypothetical bacterial integral membra	87.92
PRK10263	1355	DNA translocase FtsK; Provisional	85.04
PF11808	90	DUF3329: Domain of unknown function (DUF3329); Int	80.83

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.2e-52  Score=439.40  Aligned_cols=349  Identities=40%  Similarity=0.633  Sum_probs=279.6

Q ss_pred             HHHHHhhhhhHHhhhhhhhhHHHHHHH-HHHHHHHHHHHHHhhhhhhhchhhhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 007732          190 LMTNIYNAHDYVSRKVQQVYPVALNHL-GHFAKIMLLLSMLWLDCTIRGIDSFMRMGTTSFFSVIWCSILSVIAMVGMFK  268 (591)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~p~v~~~~-~~~~~~~~~~~~~w~dc~~rg~~s~~~~g~~~~~~i~w~~~~s~~s~~~~~~  268 (591)
                      ++.-.++.||.+    .++||.|+..+ +++|.+.|++ .+|+||++||||+++++|++++|+||||+++|..||.++.|
T Consensus        11 ~~~~~~k~~~~~----~~~~p~~~~~~~~~~g~~~l~~-k~~~~~~~r~~~~~~~~~~a~~~s~~~s~~~s~~s~~ql~~   85 (490)
T KOG0720|consen   11 VKLRVYKGRDLV----LTKMPLVFSVVFMHNGSPILLL-KVWLDCAIRGFQSFIRMGTAPFFSIMWSTLVSANSMGQLTK   85 (490)
T ss_pred             ecccccchhhhh----hhcCCcccchhhccccCchhHh-HhhccccccCCcchhccCCcchhheeeeeeeeccccccccc
Confidence            444566777655    56666666655 5778888877 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhcchhhHHHHHHHHhhhhheeeehhhhh
Q 007732          269 FLMVLVVAALVAFFIGFALALVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKFTHERLALFITTMYSIYCAWTYVGWLG  348 (591)
Q Consensus       269 ~l~~~~~a~~~~~~~g~~~~~~~v~~~~~~~lw~y~~fw~t~~~~~~gg~~f~~~h~r~~~~~~~~y~vy~~~~~~gwlg  348 (591)
                      ++++|+++.+++.|.|.++++.+++++|+++||+| +||.+..+.+-  ++|.++|+     +.+.|+.|.+-++.+|++
T Consensus        86 ~~~~~~a~~~~~~~~g~~~~~~~l~~~g~~~l~l~-~~w~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~s~kt~w~  157 (490)
T KOG0720|consen   86 FILIMVATVSVALYIGRVVGSVTLALFGLLLLWLY-SFWGTVLFSFN--LAFLSKDE-----LITVYSVYSALSYKTWWG  157 (490)
T ss_pred             cccchhhhhhhheeccccCcceeeccchHHHHHHH-HhhcchhhhHH--HHHhhhhh-----eeccccceeeeccchhhh
Confidence            99999999999999999999999999999999999 99999988877  89999999     788999999999999999


Q ss_pred             HhhhhccccccHHHHHHHHhhhcccCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 007732          349 LLLALNLSFVSSDALIFFLKSKVNQHKTDSSPEQTSGMQAGPSFSNGEPVHPAFSDNVPGLSADRSPGVPSTSGDDSEMT  428 (591)
Q Consensus       349 ~~Ls~nlsfls~D~L~~lL~~~ve~~s~ss~~Eqs~~~s~~~~~~s~ess~~Sss~s~~s~ss~~~~~~psts~~ds~~t  428 (591)
                      .++.+++.++.-+...+|....+..+.-.-               ..+..+.+..+.+..+.-++..+.......+.+.+
T Consensus       158 ~~~k~l~~~i~l~f~~~f~~~~~~~~~~~r---------------~l~~vk~~~~e~g~~tv~~~~~g~~~e~~va~n~t  222 (490)
T KOG0720|consen  158 LTLKLLRAVILLDFSIYFERNKIIQQTADR---------------PLEPVKDSGAEEGDETVESRDYGCKKEIPVATNAT  222 (490)
T ss_pred             hcchhhhhhhhhhcceeeeeehhhHHHHhh---------------hcchhhhhccccCCCchhcCCcccccccccccchh
Confidence            999999999988888887765554431100               01111112222222222333333444444455556


Q ss_pred             c-HHHHHHHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          429 S-EDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       429 s-~~ev~ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      . .+++.|.++..|+|.+|||++  ++|.++|||.|||+|..+|||||. .|.|+|+|+.|+.|||+|+|+++|+.||..
T Consensus       223 ~~adrl~re~~~~daYsvlGl~~--d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  223 SFADRLSRELNILDAYSALGLPS--DCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             hHHHhhhhhhcCCCchhhcCCCC--CCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            6 688999999999999999998  999999999999999999999998 799999999999999999999999999998


Q ss_pred             hhHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCCCCCCCcccccccccccccccceeeecccccccccccccccceeEE
Q 007732          508 LRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCT  587 (591)
Q Consensus       508 l~~ee~~~~f~~f~~~~~~~g~~gffg~gf~~s~~~~e~~~~~sr~I~C~~C~Gtg~~~~T~~~~skar~C~~C~GsF~a  587 (591)
                      +.+++..  ++++......-                ....-+..+.|.|++|+++|.|+.|.+++++++||+.|+..+.|
T Consensus       300 ~~kene~--~~~~~~~~~~~----------------~~~~eEA~ntI~CskC~n~H~r~~T~rs~s~AR~C~~C~~~H~A  361 (490)
T KOG0720|consen  300 LKKENEL--HRQVISSLNDL----------------QKAVEEARNTIFCSKCGNTHFRVLTSRSPSQARWCAECGVKHPA  361 (490)
T ss_pred             HHHHHHH--HHHHHHHHHHH----------------HHHHHHHHhheehhhhcCcceeeeecCChhhhHHHHHhCccCcc
Confidence            7765443  22221111100                00111236789999999999999999999999999999988765

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=3.3e-29  Score=263.30  Aligned_cols=144  Identities=29%  Similarity=0.399  Sum_probs=104.2

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHHHHHHHH
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYF  517 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~ee~~~~f  517 (591)
                      ..+|||+||||++  +||++||||||||||++||||+|+++++|+++|++|++|||||+||+||+.||++.........+
T Consensus         2 ~~~dyYeiLGV~k--~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~   79 (371)
T COG0484           2 AKRDYYEILGVSK--DASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGF   79 (371)
T ss_pred             CccchhhhcCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCc
Confidence            3589999999999  99999999999999999999999988999999999999999999999999999976543211111


Q ss_pred             hhh--hccc--cCCCCCCCCCCCCC---CCCC--CC------------------CCCcccccccccccccccceeeeccc
Q 007732          518 RRF--QSAS--QKNGRHGFFGSGYA---RSEA--DC------------------DDPFGESRRIACKKCNNFHVWIETKK  570 (591)
Q Consensus       518 ~~f--~~~~--~~~g~~gffg~gf~---~s~~--~~------------------e~~~~~sr~I~C~~C~Gtg~~~~T~~  570 (591)
                      ..+  ...+  ..+-+..+|+++.+   +...  ..                  +..+.+++...|+.|+|+|     .+
T Consensus        80 gg~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsG-----ak  154 (371)
T COG0484          80 GGFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSG-----AK  154 (371)
T ss_pred             CCCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCC-----CC
Confidence            111  0000  00001112322211   1101  11                  1247788999999999987     56


Q ss_pred             ccccccccccccceeEEE
Q 007732          571 SKASARWCQVFIFAFCTY  588 (591)
Q Consensus       571 ~~skar~C~~C~GsF~ay  588 (591)
                      .++...+|+.|+|+.+..
T Consensus       155 ~gt~~~tC~tC~G~G~v~  172 (371)
T COG0484         155 PGTDPKTCPTCNGSGQVR  172 (371)
T ss_pred             CCCCCCcCCCCCCcCeEE
Confidence            677899999999987654

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.89  E-value=2.2e-23  Score=220.26  Aligned_cols=67  Identities=34%  Similarity=0.484  Sum_probs=63.6

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||+||+.||++.
T Consensus         3 ~~dyY~~Lgv~~--~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G   69 (372)
T PRK14296          3 KKDYYEVLGVSK--TASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFG   69 (372)
T ss_pred             CCCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhcc
Confidence            479999999999  899999999999999999999997 5789999999999999999999999999964

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.88  E-value=3.1e-23  Score=218.81  Aligned_cols=67  Identities=37%  Similarity=0.576  Sum_probs=64.3

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +||.+|||+|||+||++||||+|+++++|+++|++|++|||||+||+||+.||++.
T Consensus         3 ~dyY~vLgv~~--~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G   69 (369)
T PRK14288          3 LSYYEILEVEK--HSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYG   69 (369)
T ss_pred             CChHHHcCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhc
Confidence            79999999999  89999999999999999999999877889999999999999999999999999964

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=4.4e-23  Score=214.93  Aligned_cols=133  Identities=32%  Similarity=0.380  Sum_probs=95.9

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHHHHHHHHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFR  518 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~ee~~~~f~  518 (591)
                      .+.||+||||++  +|+++|||||||+||++||||||++   |.++|++|++|||||+||+||+.||++....-     +
T Consensus         3 ~~~~y~il~v~~--~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~-----~   72 (337)
T KOG0712|consen    3 NTKLYDILGVSP--DASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL-----Q   72 (337)
T ss_pred             ccccceeeccCC--CcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh-----c
Confidence            478999999999  9999999999999999999999964   89999999999999999999999999763221     1


Q ss_pred             hhhccccCCCCCCCCCCCCCCCCC----C----------------CCCCcccccccccccccccceeeeccccccccccc
Q 007732          519 RFQSASQKNGRHGFFGSGYARSEA----D----------------CDDPFGESRRIACKKCNNFHVWIETKKSKASARWC  578 (591)
Q Consensus       519 ~f~~~~~~~g~~gffg~gf~~s~~----~----------------~e~~~~~sr~I~C~~C~Gtg~~~~T~~~~skar~C  578 (591)
                      .-+..++.+++..+|+.++....+    .                ...++.++++.+|+.|.|.+      .....+..|
T Consensus        73 ~g~~~~g~~~f~~~F~~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsG------gksg~~~~C  146 (337)
T KOG0712|consen   73 GGGGGGGFGGFSQFFGFGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSG------GKSGSAPKC  146 (337)
T ss_pred             ccCCCCCCccHHHhccCCCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCC------CCCCCCCCC
Confidence            111111111122233322211111    1                12357889999999999976      233455589


Q ss_pred             ccccceeEE
Q 007732          579 QVFIFAFCT  587 (591)
Q Consensus       579 ~~C~GsF~a  587 (591)
                      ..|+|+-+.
T Consensus       147 ~~C~GsGv~  155 (337)
T KOG0712|consen  147 TTCRGSGVQ  155 (337)
T ss_pred             CCCCCCCce
Confidence            999988664

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.88  E-value=1.8e-22  Score=213.15  Aligned_cols=68  Identities=43%  Similarity=0.615  Sum_probs=64.7

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||+||+||++|+.||++.
T Consensus         3 ~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G   70 (372)
T PRK14286          3 ERSYYDILGVSK--SANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG   70 (372)
T ss_pred             CCCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhC
Confidence            379999999999  89999999999999999999999877889999999999999999999999999864

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=1.4e-22  Score=215.55  Aligned_cols=68  Identities=41%  Similarity=0.609  Sum_probs=65.0

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||+||+||+||+.||++.
T Consensus         8 ~~Dyy~~Lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G   75 (392)
T PRK14279          8 EKDFYKELGVSS--DASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETR   75 (392)
T ss_pred             ccCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhh
Confidence            379999999999  89999999999999999999999877889999999999999999999999999974

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=3.2e-22  Score=210.93  Aligned_cols=68  Identities=41%  Similarity=0.578  Sum_probs=63.7

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|+++ +.|+++|++|++||++|+||++|+.||++.
T Consensus         3 ~~d~y~~lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g   71 (369)
T PRK14282          3 KKDYYEILGVSR--NATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFG   71 (369)
T ss_pred             CCChHHhcCCCC--CCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcC
Confidence            479999999999  89999999999999999999999754 678999999999999999999999999864

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=6.8e-22  Score=208.78  Aligned_cols=67  Identities=39%  Similarity=0.563  Sum_probs=63.4

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||+||+.||++.
T Consensus         3 ~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G   69 (371)
T PRK14287          3 KRDYYEVLGVDR--NASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFG   69 (371)
T ss_pred             CCCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhC
Confidence            379999999999  899999999999999999999997 4789999999999999999999999999864

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.3e-21  Score=207.59  Aligned_cols=69  Identities=39%  Similarity=0.594  Sum_probs=65.3

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +..|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G   71 (386)
T PRK14277          3 AKKDYYEILGVDR--NATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG   71 (386)
T ss_pred             CCCCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhc
Confidence            4579999999999  89999999999999999999999877889999999999999999999999999864

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.4e-21  Score=206.12  Aligned_cols=67  Identities=46%  Similarity=0.663  Sum_probs=64.3

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||++|+.||++.
T Consensus         3 ~d~y~iLgv~~--~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g   69 (365)
T PRK14285          3 RDYYEILGLSK--GASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFG   69 (365)
T ss_pred             CCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcC
Confidence            79999999999  89999999999999999999999877889999999999999999999999999964

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.8e-21  Score=206.81  Aligned_cols=66  Identities=44%  Similarity=0.695  Sum_probs=63.4

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~  506 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||+
T Consensus         8 ~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~   73 (389)
T PRK14295          8 EKDYYKVLGVPK--DATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE   73 (389)
T ss_pred             ccCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence            379999999999  899999999999999999999998778899999999999999999999999998

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=3.4e-21  Score=203.00  Aligned_cols=68  Identities=44%  Similarity=0.636  Sum_probs=64.8

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||++.
T Consensus         3 ~~d~y~~lgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G   70 (366)
T PRK14294          3 KRDYYEILGVTR--DASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYG   70 (366)
T ss_pred             CCChHHHhCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhc
Confidence            479999999999  89999999999999999999999877889999999999999999999999999865

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=2.7e-21  Score=204.66  Aligned_cols=68  Identities=41%  Similarity=0.643  Sum_probs=64.6

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~d~y~~Lgv~~--~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G   70 (380)
T PRK14297          3 SKDYYEVLGLEK--GASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFG   70 (380)
T ss_pred             CCChHHhhCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcC
Confidence            369999999999  89999999999999999999999877889999999999999999999999999864

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=3.2e-21  Score=204.15  Aligned_cols=66  Identities=47%  Similarity=0.594  Sum_probs=63.1

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||++|+.||++.
T Consensus         3 ~d~y~iLgv~~--~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G   68 (378)
T PRK14278          3 RDYYGLLGVSR--NASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGG   68 (378)
T ss_pred             CCcceecCCCC--CCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccC
Confidence            69999999999  899999999999999999999997 5789999999999999999999999999864

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.8e-21  Score=204.61  Aligned_cols=67  Identities=40%  Similarity=0.569  Sum_probs=63.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||++|+.||++.
T Consensus         3 ~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G   69 (380)
T PRK14276          3 NTEYYDRLGVSK--DASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYG   69 (380)
T ss_pred             CCCHHHhhCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcC
Confidence            379999999999  899999999999999999999997 4789999999999999999999999999864

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.1e-21  Score=205.39  Aligned_cols=68  Identities=43%  Similarity=0.571  Sum_probs=64.2

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +.+|||+||||++  +|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~~d~y~~Lgv~~--~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G   70 (378)
T PRK14283          3 EKRDYYEVLGVDR--NADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFG   70 (378)
T ss_pred             CcCChHHhhCCCC--CCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhc
Confidence            4589999999999  9999999999999999999999974 789999999999999999999999999964

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=1.7e-21  Score=201.85  Aligned_cols=72  Identities=43%  Similarity=0.610  Sum_probs=68.7

Q ss_pred             HHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          435 RLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       435 ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .++..+|||+||||++  +|+..|||+||||||++||||||+++|.|.+.|++|+.|||||+||++|+.||+++
T Consensus        11 ~v~~~rDfYelLgV~k--~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~G   82 (336)
T KOG0713|consen   11 AVLAGRDFYELLGVPK--NASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYG   82 (336)
T ss_pred             hhhcCCCHHHHhCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhh
Confidence            4556699999999999  99999999999999999999999999999999999999999999999999999976

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2e-21  Score=205.73  Aligned_cols=67  Identities=46%  Similarity=0.640  Sum_probs=63.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||++|+.||++.
T Consensus         4 ~~d~y~iLgv~~--~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G   70 (377)
T PRK14298          4 TRDYYEILGLSK--DASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFG   70 (377)
T ss_pred             CCCHHHhhCCCC--CCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcC
Confidence            379999999999  899999999999999999999997 4789999999999999999999999999864

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.6e-21  Score=204.47  Aligned_cols=68  Identities=43%  Similarity=0.595  Sum_probs=64.6

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||++.
T Consensus         3 ~~~~y~~Lgv~~--~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g   70 (373)
T PRK14301          3 QRDYYEVLGVSR--DASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFG   70 (373)
T ss_pred             CCChHHhcCCCC--CCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcc
Confidence            379999999999  89999999999999999999999877889999999999999999999999999864

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=5.8e-21  Score=201.99  Aligned_cols=67  Identities=42%  Similarity=0.571  Sum_probs=63.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~~~y~iLgv~~--~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G   69 (376)
T PRK14280          3 KRDYYEVLGVSK--SASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFG   69 (376)
T ss_pred             CCChHHhhCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcC
Confidence            379999999999  899999999999999999999997 4789999999999999999999999999964

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=5.4e-21  Score=201.49  Aligned_cols=68  Identities=49%  Similarity=0.706  Sum_probs=64.6

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~d~y~iLgv~~--~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (371)
T PRK10767          3 KRDYYEVLGVSR--NASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG   70 (371)
T ss_pred             CCChHHhcCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcc
Confidence            479999999999  89999999999999999999999877889999999999999999999999999864

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=9.1e-21  Score=200.85  Aligned_cols=66  Identities=44%  Similarity=0.601  Sum_probs=62.9

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~d~Y~~Lgv~~--~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g   68 (382)
T PRK14291          3 KDYYEILGVSR--NATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFG   68 (382)
T ss_pred             CCHHHhhCCCC--CCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhc
Confidence            79999999999  8999999999999999999999974 789999999999999999999999999864

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=7.3e-21  Score=202.13  Aligned_cols=67  Identities=43%  Similarity=0.661  Sum_probs=64.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||+||+.||++.
T Consensus         1 ~d~y~iLgv~~--~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G   67 (391)
T PRK14284          1 MDYYTILGVSK--TASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYG   67 (391)
T ss_pred             CCHHHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcc
Confidence            48999999999  89999999999999999999999877889999999999999999999999999865

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.84  E-value=2.4e-21  Score=208.03  Aligned_cols=123  Identities=30%  Similarity=0.462  Sum_probs=89.1

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHH--------
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRRE--------  511 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~e--------  511 (591)
                      +|||+||||++  +||.+|||+|||+||++||||||++    .++|++|++||+||+||+||+.||++....        
T Consensus        28 ~d~Y~vLGV~~--~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~~~  101 (421)
T PTZ00037         28 EKLYEVLNLSK--DCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA  101 (421)
T ss_pred             hhHHHHcCCCC--CCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCCCc
Confidence            79999999999  8999999999999999999999852    489999999999999999999999864321        


Q ss_pred             HHHHHHhhhhccccCCCCCCCCCCCCC---CCCCC----------------CCCCcccccccccccccccceeeeccccc
Q 007732          512 ELLDYFRRFQSASQKNGRHGFFGSGYA---RSEAD----------------CDDPFGESRRIACKKCNNFHVWIETKKSK  572 (591)
Q Consensus       512 e~~~~f~~f~~~~~~~g~~gffg~gf~---~s~~~----------------~e~~~~~sr~I~C~~C~Gtg~~~~T~~~~  572 (591)
                      +..+.|..|            |+++..   +..+.                ....+.+.+.+.|+.|.|+|     . ..
T Consensus       102 d~~d~f~~~------------Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G-----~-~~  163 (421)
T PTZ00037        102 DASDLFDLI------------FGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHG-----G-PK  163 (421)
T ss_pred             chhhhHHHh------------hccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCC-----C-CC
Confidence            111222222            111100   00111                12346678899999999987     2 22


Q ss_pred             ccccccccccceeE
Q 007732          573 ASARWCQVFIFAFC  586 (591)
Q Consensus       573 skar~C~~C~GsF~  586 (591)
                      ....+|..|+|+..
T Consensus       164 ~~~~~C~~C~G~G~  177 (421)
T PTZ00037        164 DAFVDCKLCNGQGI  177 (421)
T ss_pred             CCCccCCCCCCCCe
Confidence            35677888888764

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=1.8e-20  Score=198.69  Aligned_cols=68  Identities=46%  Similarity=0.666  Sum_probs=64.9

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||++|||++  +|+.+|||+|||+||++||||+|++++.|+++|++|++||++|+||.+|+.||++.
T Consensus         4 ~~~~y~~Lgv~~--~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G   71 (386)
T PRK14289          4 KRDYYEVLGVSK--TATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFG   71 (386)
T ss_pred             cCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Confidence            479999999999  89999999999999999999999877889999999999999999999999999864

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=3e-20  Score=197.91  Aligned_cols=67  Identities=46%  Similarity=0.671  Sum_probs=64.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +|+.+|||+|||+||++||||++++++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~d~y~iLgv~~--~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g   69 (397)
T PRK14281          3 RDYYEVLGVSR--SADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFG   69 (397)
T ss_pred             CChhhhcCCCC--CCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence            69999999999  89999999999999999999999877889999999999999999999999999864

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=4.3e-20  Score=194.56  Aligned_cols=67  Identities=42%  Similarity=0.635  Sum_probs=63.1

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch-HHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-KAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p-~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +|+.+|||+|||+||++||||++++++ .|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~d~y~vLgv~~--~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G   70 (365)
T PRK14290          3 KDYYKILGVDR--NASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG   70 (365)
T ss_pred             CChhhhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccC
Confidence            69999999999  899999999999999999999998654 79999999999999999999999999854

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.81  E-value=8.3e-20  Score=191.19  Aligned_cols=65  Identities=43%  Similarity=0.641  Sum_probs=61.8

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      |||+||||++  +|+.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++.
T Consensus         1 d~y~~Lgv~~--~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g   65 (354)
T TIGR02349         1 DYYEILGVSK--DASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG   65 (354)
T ss_pred             ChHHhCCCCC--CCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcc
Confidence            7999999999  899999999999999999999997 5778999999999999999999999999864

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=8.1e-20  Score=193.04  Aligned_cols=66  Identities=39%  Similarity=0.532  Sum_probs=62.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +||.+|||+|||++|++||||+++ ++.++++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~~y~iLgv~~--~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G   68 (372)
T PRK14300          3 QDYYQILGVSK--TASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFG   68 (372)
T ss_pred             CChHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcc
Confidence            69999999999  899999999999999999999997 4678999999999999999999999999964

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=1.9e-19  Score=190.31  Aligned_cols=67  Identities=43%  Similarity=0.599  Sum_probs=63.0

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +|+.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||.+.
T Consensus         2 ~~d~y~vLgv~~--~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g   68 (374)
T PRK14293          2 AADYYEILGVSR--DADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFG   68 (374)
T ss_pred             CCChhhhcCCCC--CCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhcc
Confidence            369999999999  899999999999999999999997 4779999999999999999999999999854

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=9.4e-20  Score=192.15  Aligned_cols=66  Identities=41%  Similarity=0.598  Sum_probs=62.7

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +|+.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++.
T Consensus         2 ~d~y~~Lgv~~--~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G   67 (371)
T PRK14292          2 MDYYELLGVSR--TASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFG   67 (371)
T ss_pred             CChHHHcCCCC--CCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcC
Confidence            59999999999  899999999999999999999997 5789999999999999999999999999864

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=9.7e-19  Score=179.86  Aligned_cols=68  Identities=41%  Similarity=0.577  Sum_probs=64.2

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR  510 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~  510 (591)
                      .|||+||||++  +|+..|||+||++||++||||.|.. ++|.++|++|.+|||+|+|++||+.||..+..
T Consensus        43 ~d~Y~vLgv~~--~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~  110 (288)
T KOG0715|consen   43 EDYYKVLGVSR--NATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLE  110 (288)
T ss_pred             cchhhhhCcCC--CCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhh
Confidence            49999999999  9999999999999999999999985 59999999999999999999999999997654

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=2.8e-17  Score=169.62  Aligned_cols=70  Identities=46%  Similarity=0.680  Sum_probs=66.9

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhH
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR  510 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~  510 (591)
                      ..|||++|||+.  +++..+||+|||+.|++|||||||++|.|.+.|+.+.+||+||+|+.+|..||..++.
T Consensus         4 ~~dyY~lLgi~~--~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~   73 (296)
T KOG0691|consen    4 DTDYYDLLGISE--DATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKS   73 (296)
T ss_pred             cchHHHHhCCCC--CCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh
Confidence            579999999999  8999999999999999999999999999999999999999999999999999997643

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.68  E-value=3.7e-17  Score=167.73  Aligned_cols=67  Identities=37%  Similarity=0.550  Sum_probs=63.5

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||++|+.||++.
T Consensus         3 ~~d~y~vLgv~~--~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g   69 (291)
T PRK14299          3 YKDYYAILGVPK--NASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYG   69 (291)
T ss_pred             CCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcC
Confidence            479999999999  899999999999999999999997 5789999999999999999999999999864

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=2.8e-17  Score=166.49  Aligned_cols=67  Identities=40%  Similarity=0.644  Sum_probs=64.9

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|+|+|||+++  +|+.++|||+||+|+++||||+++++|++.++|++||+||+||+||.||..||+++
T Consensus        31 ~~LYdVLgl~k--~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g   97 (279)
T KOG0716|consen   31 LDLYDVLGLPK--TATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYG   97 (279)
T ss_pred             hHHHHHhCCCc--ccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhh
Confidence            68999999999  99999999999999999999999988999999999999999999999999999964

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.67  E-value=6.8e-17  Score=129.33  Aligned_cols=63  Identities=40%  Similarity=0.713  Sum_probs=59.5

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch-HHHHHHHHHHHHHHHhhhhhhHHhhh
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-KAVEAFKKLQNAYEVLFDSFKRKAYD  505 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p-~A~e~Fk~I~eAYEVLsDp~KR~~YD  505 (591)
                      |||+||||++  +++.++||++|+++++++|||+++.++ .+++.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~--~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPP--DASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTT--TSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCC--CCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            5899999999  899999999999999999999987654 58999999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=1.8e-16  Score=169.69  Aligned_cols=67  Identities=42%  Similarity=0.619  Sum_probs=62.9

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      .+.||+||||.+  +|+..+||++||+|||+|||||||+. .+|++.|+.|+.||+|||||+.|+.||..
T Consensus         7 ~~c~YE~L~v~~--~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~h   74 (508)
T KOG0717|consen    7 KRCYYEVLGVER--DADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSH   74 (508)
T ss_pred             hhHHHHHhcccc--cCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHH
Confidence            378999999999  89999999999999999999998755 67999999999999999999999999974

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.61  E-value=5.8e-16  Score=159.86  Aligned_cols=67  Identities=33%  Similarity=0.520  Sum_probs=63.0

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +++.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++.
T Consensus         3 ~~d~y~~Lgv~~--~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g   69 (306)
T PRK10266          3 LKDYYAIMGVKP--TDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLW   69 (306)
T ss_pred             cCChHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Confidence            379999999999  899999999999999999999986 4689999999999999999999999999864

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=2e-15  Score=161.80  Aligned_cols=68  Identities=37%  Similarity=0.572  Sum_probs=62.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN---EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~---p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||.+|+|++  +|+.+|||+|||++++.|||||+.++   ..|++.|++|++|||||+||++|+.||.+.
T Consensus         8 e~e~Ya~LNlpk--dAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G   78 (546)
T KOG0718|consen    8 EIELYALLNLPK--DATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYG   78 (546)
T ss_pred             hhhHHHHhCCCc--ccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhh
Confidence            368999999999  99999999999999999999999643   348899999999999999999999999753

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.56  E-value=4.4e-15  Score=116.87  Aligned_cols=59  Identities=49%  Similarity=0.756  Sum_probs=54.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCC-chHHHHHHHHHHHHHHHhhhhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG-NEKAVEAFKKLQNAYEVLFDSFK  500 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~-~p~A~e~Fk~I~eAYEVLsDp~K  500 (591)
                      .|||+||||++  +++.++||++|+++++++|||++++ .+.+++.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~--~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPR--DASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            48999999999  8999999999999999999999975 57899999999999999999853

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.56  E-value=3.9e-15  Score=138.63  Aligned_cols=68  Identities=41%  Similarity=0.682  Sum_probs=64.0

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-HHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-AVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~-A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      ...+||+||||++  +|+.+|||++||++|+++|||+++.++. +++.|+.|++||++|+|+.+|..||..
T Consensus         4 ~~~~~y~iLgv~~--~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPP--NASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            3479999999998  8999999999999999999999998775 999999999999999999999999983

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.55  E-value=4e-15  Score=170.50  Aligned_cols=69  Identities=32%  Similarity=0.391  Sum_probs=64.0

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ..++||+||||++  +|+.++||+|||+||++|||||+++ +.|.++|++|++||+||+||.+|+.||+++.
T Consensus       571 ~d~dYYdILGVs~--dAS~~EIKKAYRKLAlkyHPDKN~~-~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~  639 (1136)
T PTZ00341        571 PDTLFYDILGVGV--NADMKEISERYFKLAENYYPPKRSG-NEGFHKFKKINEAYQILGDIDKKKMYNKFGY  639 (1136)
T ss_pred             CCCChHHHcCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHhCCHHHHHHHhhccc
Confidence            4579999999999  9999999999999999999999986 4788999999999999999999999998643

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.53  E-value=1.5e-14  Score=111.73  Aligned_cols=55  Identities=44%  Similarity=0.680  Sum_probs=51.6

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhh
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFD  497 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsD  497 (591)
                      |||++|||++  +++.++||++||++++++|||++++.+.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~--~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPP--DASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6999999999  899999999999999999999997547789999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.52  E-value=1.1e-14  Score=145.49  Aligned_cols=68  Identities=38%  Similarity=0.626  Sum_probs=62.5

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCC--CchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNM--GNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~--~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|+|+||||.+  +|+..+||+||++||+++|||+++  ...+|++.|++|+.||+||+|.++|+.||+..
T Consensus        13 ~~d~YevLGVer--~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG   82 (264)
T KOG0719|consen   13 KKDLYEVLGVER--DATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETG   82 (264)
T ss_pred             ccCHHHHhhhcc--cCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccC
Confidence            469999999999  999999999999999999999994  23568999999999999999999999999854

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.46  E-value=4.9e-14  Score=147.71  Aligned_cols=75  Identities=33%  Similarity=0.446  Sum_probs=66.1

Q ss_pred             HHHHHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          432 EVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE---KAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       432 ev~ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p---~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+......+|||+||||.+  +|+..||.|||||+|.+||||...+.+   .|+.+|..|..|-|||+||++|+.||+..
T Consensus       386 rlkkqs~kRDYYKILGVkR--nAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGe  463 (504)
T KOG0624|consen  386 RLKKQSGKRDYYKILGVKR--NASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGE  463 (504)
T ss_pred             HHHHHhccchHHHHhhhcc--cccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCC
Confidence            3444455689999999999  999999999999999999999997543   48899999999999999999999999853

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=1.9e-13  Score=135.30  Aligned_cols=71  Identities=28%  Similarity=0.426  Sum_probs=64.3

Q ss_pred             hCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       437 l~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ....|+||||||++  .+++.|||||||+|++++||||++...+.++.|..|++||+.|+|+..|..|..+..
T Consensus        96 ~~~fDPyEILGl~p--gas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~  166 (230)
T KOG0721|consen   96 RQKFDPYEILGLDP--GASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN  166 (230)
T ss_pred             hhcCCcHHhhCCCC--CCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence            34479999999999  899999999999999999999998556677889999999999999999999998754

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.41  E-value=2.7e-13  Score=130.23  Aligned_cols=69  Identities=28%  Similarity=0.446  Sum_probs=60.7

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-----AVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~-----A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||++|||++..++|.++||++||++++++|||++...+.     |.+.|+.|++||++|+||.+|+.|+-.+
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l   74 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSL   74 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHh
Confidence            38999999999666899999999999999999999864432     5678999999999999999999998644

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.41  E-value=2.2e-13  Score=153.64  Aligned_cols=66  Identities=35%  Similarity=0.545  Sum_probs=62.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +|+.++||++||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||.+.
T Consensus         2 ~DYYeVLGVs~--dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG   67 (871)
T TIGR03835         2 RDYYEVLGIDR--DADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYG   67 (871)
T ss_pred             CChhHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhc
Confidence            69999999999  8999999999999999999999975 788899999999999999999999999864

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.39  E-value=5.5e-13  Score=127.76  Aligned_cols=69  Identities=32%  Similarity=0.458  Sum_probs=59.9

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH---HHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK---AVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~---A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||++|||++..++|.++|+++||++++++|||++.....   +.+.+..|++||++|+||.+|+.|+-.+
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l   73 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL   73 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            68999999999666899999999999999999999864322   3356889999999999999999998754

>PHA03102 Small T antigen; Reviewed

Probab=99.38  E-value=3.6e-13  Score=127.83  Aligned_cols=64  Identities=27%  Similarity=0.439  Sum_probs=58.3

Q ss_pred             CCcccccCcccCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          440 TDHYSALGLSRFENV--DVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       440 ~DyYeILGV~~~~~A--s~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ..+|+||||++  +|  |.++||+|||++|+++||||+++    +++|++|++||++|+|+.+|..||....
T Consensus         5 ~~l~~vLGl~~--~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~   70 (153)
T PHA03102          5 KELMDLLGLPR--SAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEE   70 (153)
T ss_pred             HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCC
Confidence            45799999999  89  99999999999999999999753    5799999999999999999999998643

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.38  E-value=7e-13  Score=128.15  Aligned_cols=70  Identities=33%  Similarity=0.468  Sum_probs=61.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHH-----HHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKA-----VEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A-----~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      .|||++|||++..+++..+||++||++++++|||+++..+.+     .+.+..||+||++|+||.+|+.|+-.+.
T Consensus         6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~   80 (176)
T PRK03578          6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR   80 (176)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence            699999999997678999999999999999999998755443     3446899999999999999999996543

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.37  E-value=9.1e-13  Score=127.15  Aligned_cols=72  Identities=28%  Similarity=0.360  Sum_probs=63.8

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-----AVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~-----A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ...|||++|||++..+.+..+|+++||++++++|||++.+.+.     +.+.|..||+||++|+||.+|+.|+-.+.
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~   78 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS   78 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            3579999999999777999999999999999999999865433     56789999999999999999999997554

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.31  E-value=2.2e-12  Score=137.69  Aligned_cols=72  Identities=39%  Similarity=0.637  Sum_probs=66.4

Q ss_pred             HHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          435 RLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       435 ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +..+-+|||+|||+.+  +++.+|||+|||++|+.+|||++.++ .+++.+|+++.+||.+|+||.+|..||...
T Consensus       368 kkSkRkd~ykilGi~~--~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~  440 (486)
T KOG0550|consen  368 KKSKRKDWYKILGISR--NASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQ  440 (486)
T ss_pred             HHhhhhhHHHHhhhhh--hcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccccc
Confidence            4455689999999999  89999999999999999999999877 789999999999999999999999999753

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.24  E-value=4e-12  Score=124.46  Aligned_cols=69  Identities=43%  Similarity=0.598  Sum_probs=61.7

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ..|||+||+|++  +|+.+|||+|||++|+++||||++.. ..|+++|++|.+||++|+||.+|..||++..
T Consensus         2 ~~d~~~~l~i~~--~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~   71 (306)
T KOG0714|consen    2 GKDYYKILGIAR--SASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE   71 (306)
T ss_pred             cccHHHHhCccc--cccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence            479999999998  78888999999999999999998754 2466689999999999999999999998654

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.20  E-value=2.3e-11  Score=119.60  Aligned_cols=88  Identities=36%  Similarity=0.517  Sum_probs=79.2

Q ss_pred             CCCCCCCCCCCCcHHHHHHHhCC------CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHH
Q 007732          417 VPSTSGDDSEMTSEDEVVRLLNC------TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQ  489 (591)
Q Consensus       417 ~psts~~ds~~ts~~ev~ril~~------~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~  489 (591)
                      ..+....++.+|+.++++|++.+      .|+|+||.|.|  ..+.++||+.||+|++.+|||||+++ +.|..+|..|.
T Consensus        24 vk~~ek~d~vLts~~qIeRllrpgstyfnLNpfeVLqIdp--ev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivk  101 (250)
T KOG1150|consen   24 VKSIEKRDSVLTSKQQIERLLRPGSTYFNLNPFEVLQIDP--EVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVK  101 (250)
T ss_pred             HHhhhhhhcccCcHHHHHHHhcCCccccccChHHHHhcCC--CCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHH
Confidence            44567778999999999999995      38999999999  89999999999999999999999988 78999999999


Q ss_pred             HHHHHhhhhhhHHhhhh
Q 007732          490 NAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       490 eAYEVLsDp~KR~~YD~  506 (591)
                      +||..|-|+..|..-+.
T Consensus       102 KA~k~l~n~~~rkr~~~  118 (250)
T KOG1150|consen  102 KAYKLLENDKIRKRCLD  118 (250)
T ss_pred             HHHHHHhCHHHHHHHHH
Confidence            99999999987766554

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.20  E-value=6.8e-12  Score=127.04  Aligned_cols=70  Identities=33%  Similarity=0.558  Sum_probs=64.2

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHHH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREE  512 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~ee  512 (591)
                      .|.|+||||.+  +++..||+||||+||+++|||++++ +++.+.|+.|..|||+|.|.+.|..||-.+..++
T Consensus        33 enCYdVLgV~R--ea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyaldhpd  102 (329)
T KOG0722|consen   33 ENCYDVLGVAR--EANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYALDHPD  102 (329)
T ss_pred             hhHHHHhhhhh--hccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHhcCch
Confidence            68999999999  8899999999999999999999984 7778999999999999999999999997665543

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.10  E-value=8.8e-11  Score=120.04  Aligned_cols=57  Identities=39%  Similarity=0.519  Sum_probs=51.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCC---c----hHHHHHHHHHHHHHHHhhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG---N----EKAVEAFKKLQNAYEVLFDS  498 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~---~----p~A~e~Fk~I~eAYEVLsDp  498 (591)
                      .|+|+||||++  ++|.+|||++||+|+++||||++.+   +    +.|+++|++|++||++|+..
T Consensus       200 ~~ay~vLgv~~--~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        200 EDAYKVLGVSE--SDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             HhHHHHcCCCC--CCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            68999999999  8999999999999999999999742   1    35889999999999999853

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.08  E-value=1e-10  Score=106.65  Aligned_cols=51  Identities=18%  Similarity=0.317  Sum_probs=46.3

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLF  496 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLs  496 (591)
                      .++|+||||++  +++.+|||++||+|++++|||+.. +   .+.|++|++|||+|.
T Consensus        65 ~eAy~ILGv~~--~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISP--TASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCC--CCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence            57899999999  899999999999999999999963 3   578999999999985

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.01  E-value=6.3e-10  Score=107.59  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=61.2

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-----KAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p-----~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      .|||++||||+..+.+..+++++||++.+++|||+....+     .|.+.-..||+||.+|+||-+|+.|--.+.
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~   76 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN   76 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence            6999999999988899999999999999999999985543     245568899999999999999999976443

>PHA02624 large T antigen; Provisional

Probab=99.00  E-value=3e-10  Score=127.04  Aligned_cols=59  Identities=25%  Similarity=0.460  Sum_probs=55.4

Q ss_pred             CCcccccCcccCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhh
Q 007732          440 TDHYSALGLSRFENV--DVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAY  504 (591)
Q Consensus       440 ~DyYeILGV~~~~~A--s~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~Y  504 (591)
                      .++|++|||++  +|  +.++||+|||++|+++||||++ +   +++|++|++||++|+|+.+|..|
T Consensus        11 ~elyelLGL~~--~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         11 KELMDLLGLPM--AAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhc
Confidence            58999999999  89  9999999999999999999974 2   68999999999999999999998

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.85  E-value=4.1e-09  Score=100.29  Aligned_cols=57  Identities=30%  Similarity=0.402  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          453 NVDVSILKREYRKKAMLVHPDKNMGNE-----KAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       453 ~As~eeIKKAYRKLAlk~HPDKn~~~p-----~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      +.+..+|+++||++++++|||+.+...     .+.+.|..|++||++|+||.+|+.|+-.+.
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~   63 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH   63 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            468899999999999999999975432     266889999999999999999999997654

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=98.84  E-value=2.5e-09  Score=115.36  Aligned_cols=68  Identities=29%  Similarity=0.452  Sum_probs=61.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCC-----chHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG-----NEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~-----~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      --|+|||||++.  +++..|||++||+|+.|+||||.+.     ..+-++.+++|++||+.|+|...|..|-.++
T Consensus        97 ~fDPyEILGI~~--~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yG  169 (610)
T COG5407          97 GFDPYEILGIDQ--DTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYG  169 (610)
T ss_pred             CCChHHhhcccC--CCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcC
Confidence            369999999999  8999999999999999999999864     1457799999999999999999999998753

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.59  E-value=3.4e-08  Score=101.27  Aligned_cols=68  Identities=38%  Similarity=0.475  Sum_probs=60.3

Q ss_pred             CCCcccccCcccCC-CCCHHHHHHHHHHHHHhhCCCCC--CCchHHHHHHHHHHHHHHHhhhhhhHHhhhh
Q 007732          439 CTDHYSALGLSRFE-NVDVSILKREYRKKAMLVHPDKN--MGNEKAVEAFKKLQNAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       439 ~~DyYeILGV~~~~-~As~eeIKKAYRKLAlk~HPDKn--~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~  506 (591)
                      ..|+|.+|||+.+. .+++.+|.++.++...+||||+.  .++-...+.|+.|+.||+||+|+.+|.+||.
T Consensus        42 ~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS  112 (379)
T COG5269          42 KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS  112 (379)
T ss_pred             hhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccc
Confidence            36999999999763 48899999999999999999997  3345678999999999999999999999996

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.23  E-value=1.2e-06  Score=101.90  Aligned_cols=55  Identities=29%  Similarity=0.416  Sum_probs=47.3

Q ss_pred             CCcccccCcccCC--CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhh
Q 007732          440 TDHYSALGLSRFE--NVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFD  497 (591)
Q Consensus       440 ~DyYeILGV~~~~--~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsD  497 (591)
                      .+-|+||.|+-..  ..+.+.|||+|+|||.+||||||   |+..+.|.++++|||.|+.
T Consensus      1281 d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN---PEGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1281 DLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN---PEGREMFERVNKAYELLSS 1337 (2235)
T ss_pred             HHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC---chHHHHHHHHHHHHHHHHH
Confidence            5789999998531  23458899999999999999999   4678999999999999993

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.60  E-value=0.00013  Score=74.23  Aligned_cols=57  Identities=25%  Similarity=0.510  Sum_probs=50.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHH-Hhhhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYE-VLFDSF  499 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYE-VLsDp~  499 (591)
                      ..+|.+|||..  .|+.++++.+|.+|++++|||... ++...+.|.+|.+||. ||+..-
T Consensus        47 ~e~fril~v~e--~~~adevr~af~~lakq~hpdsgs-~~adaa~f~qideafrkvlq~~~  104 (342)
T KOG0568|consen   47 MECFRILGVEE--GADADEVREAFHDLAKQVHPDSGS-EEADAARFIQIDEAFRKVLQEKF  104 (342)
T ss_pred             HHHHHHhcccc--cCchhHHHHHHHHHHHHcCCCCCC-ccccHHHHHHHHHHHHHHHHHHH
Confidence            46899999999  899999999999999999999985 3556788999999997 887543

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.32  E-value=0.00027  Score=68.08  Aligned_cols=74  Identities=24%  Similarity=0.367  Sum_probs=61.0

Q ss_pred             HhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCC-----chHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          436 LLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG-----NEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       436 il~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~-----~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      +....+||+++|.......+++-++.-|.-..+++|||+...     ...|.+...+|++||.+|.||-+|+.|--.+.
T Consensus         4 ~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~   82 (168)
T KOG3192|consen    4 MGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK   82 (168)
T ss_pred             cchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            345578999999887666788888889999999999999532     13577889999999999999999999976443

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.00  E-value=0.0011  Score=60.42  Aligned_cols=50  Identities=22%  Similarity=0.315  Sum_probs=42.5

Q ss_pred             ccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhh
Q 007732          443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDS  498 (591)
Q Consensus       443 YeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp  498 (591)
                      -.||||.+  +++.+.||+|+|+.-+..|||+.. +|-   .-.+|+||+++|...
T Consensus        59 ~lIL~v~~--s~~k~KikeaHrriM~~NHPD~GG-SPY---lAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   59 ALILGVTP--SLDKDKIKEAHRRIMLANHPDRGG-SPY---LASKINEAKDLLEGT  108 (112)
T ss_pred             HHHhCCCc--cccHHHHHHHHHHHHHcCCCcCCC-CHH---HHHHHHHHHHHHhcc
Confidence            46899999  899999999999999999999995 443   234799999999754

>PF14901 Jiv90: Cleavage inducing molecular chaperone

Probab=96.57  E-value=0.00072  Score=60.24  Aligned_cols=40  Identities=33%  Similarity=0.511  Sum_probs=36.3

Q ss_pred             cccccccccccccceeeecccccccccccccccceeEEEe
Q 007732          550 ESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTYM  589 (591)
Q Consensus       550 ~sr~I~C~~C~Gtg~~~~T~~~~skar~C~~C~GsF~ay~  589 (591)
                      ..+.+.|++|++.|.++.|.+.+..+++|++|+....|.+
T Consensus         2 a~n~i~C~~C~~~H~r~~t~r~~~~AR~C~~C~~~H~Ak~   41 (94)
T PF14901_consen    2 ASNTIRCDKCGGKHKRIETDRPPSAARYCQDCKIRHPAKE   41 (94)
T ss_pred             ccceeechhhCCeeeeEEecCchhhhHhHHHhhhhccccc
Confidence            4578999999999999999999999999999999887753

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.18  E-value=0.0037  Score=60.51  Aligned_cols=67  Identities=28%  Similarity=0.415  Sum_probs=53.5

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-----AVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~-----A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      |++...|.++....+.+.++..|+.+.+.+|||+....+.     +-+.+..++.||.+|.||-+|..|--.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~la   73 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLA   73 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence            4566667776445567889999999999999999864433     335799999999999999999999653

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.89  E-value=0.0077  Score=66.68  Aligned_cols=42  Identities=33%  Similarity=0.501  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHHHHHhhCCCCCCCch---H----HHHHHHHHHHHHHH
Q 007732          453 NVDVSILKREYRKKAMLVHPDKNMGNE---K----AVEAFKKLQNAYEV  494 (591)
Q Consensus       453 ~As~eeIKKAYRKLAlk~HPDKn~~~p---~----A~e~Fk~I~eAYEV  494 (591)
                      =.+.++|||+|||..|.+||||.+..+   .    |++.|..+++|++.
T Consensus       399 LVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  399 LVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             ccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            368899999999999999999986542   2    55666666666654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.39  E-value=0.012  Score=57.08  Aligned_cols=54  Identities=35%  Similarity=0.538  Sum_probs=46.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHHHHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-------EKAVEAFKKLQNAYEVL  495 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-------p~A~e~Fk~I~eAYEVL  495 (591)
                      .+.|.+|++..  .++..+||++|+++....|||+-...       ..+.+++++|++||+-+
T Consensus       113 ~~~l~~l~~~~--~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEI--KADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCch--hhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            68999999999  88999999999999999999986321       35788999999999753

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=90.97  E-value=0.067  Score=56.44  Aligned_cols=32  Identities=19%  Similarity=0.543  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-----HHHHhhhHHHH
Q 007732          259 SVIAMVGMFKFLMVLVVAALV-----AFFIGFALALV  290 (591)
Q Consensus       259 s~~s~~~~~~~l~~~~~a~~~-----~~~~g~~~~~~  290 (591)
                      |=....|++.+.+.+.++++.     +.|+|+.+-+|
T Consensus        78 CPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l  114 (381)
T PF05297_consen   78 CPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFL  114 (381)
T ss_dssp             -------------------------------------
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence            444556666665555555443     34666554444

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=90.66  E-value=0.65  Score=43.71  Aligned_cols=52  Identities=17%  Similarity=0.172  Sum_probs=39.2

Q ss_pred             ccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhh
Q 007732          443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK  500 (591)
Q Consensus       443 YeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~K  500 (591)
                      ..||||++  ..+.++|.+.|.+|-...+|++.+ +   .-.-.+|..|.|.|..+-+
T Consensus        61 ~~ILnv~~--~~~~eeI~k~y~~Lf~~Nd~~kGG-S---fYLQSKV~rAKErl~~El~  112 (127)
T PF03656_consen   61 RQILNVKE--ELSREEIQKRYKHLFKANDPSKGG-S---FYLQSKVFRAKERLEQELK  112 (127)
T ss_dssp             HHHHT--G----SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCC--ccCHHHHHHHHHHHHhccCCCcCC-C---HHHHHHHHHHHHHHHHHHH
Confidence            67899999  789999999999999999999874 2   4556789999999886553

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus

Probab=87.92  E-value=6.7  Score=38.66  Aligned_cols=63  Identities=16%  Similarity=0.342  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhc----chhhHHHHHHHHhhhhheeeehhhhhHhh
Q 007732          289 LVVVALSGTILLWLYGSFWTTFFVIFLGGLAFKF----THERLALFITTMYSIYCAWTYVGWLGLLL  351 (591)
Q Consensus       289 ~~~v~~~~~~~lw~y~~fw~t~~~~~~gg~~f~~----~h~r~~~~~~~~y~vy~~~~~~gwlg~~L  351 (591)
                      ++|.+++--+++.+-|.+|+.....+++|++--+    .|+|=..-++..|++|++..-+.++=.++
T Consensus        61 ~~i~~~i~gl~~~~~G~~~~~~~~~iv~gliAElI~~~g~y~~~~~~~iay~vf~~~~~g~~~p~~~  127 (186)
T PF09605_consen   61 FLIMGIIMGLIFFLMGHGWPMLIVCIVGGLIAELILKKGGYKSKKRNTIAYAVFSLGYMGPYLPIWF  127 (186)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            3455555556678888889999888888876543    56666667888999999987766665555

If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).

>PRK10263 DNA translocase FtsK; Provisional

Probab=85.04  E-value=5.5  Score=49.81  Aligned_cols=12  Identities=25%  Similarity=0.650  Sum_probs=5.8

Q ss_pred             hhhHHHHHHHhh
Q 007732          306 FWTTFFVIFLGG  317 (591)
Q Consensus       306 fw~t~~~~~~gg  317 (591)
                      +|+.+++++.|.
T Consensus       170 llLIGLiLlTgl  181 (1355)
T PRK10263        170 VWAAGLTLFTGW  181 (1355)
T ss_pred             HHHHHHHHHHhh
Confidence            455555444443

>PF11808 DUF3329: Domain of unknown function (DUF3329); InterPro: IPR021766 This family of proteins are functionally uncharacterised

Probab=80.83  E-value=4.5  Score=35.53  Aligned_cols=31  Identities=26%  Similarity=0.459  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 007732          268 KFLMVLVVAALVAFFIGFALALVVVALSGTI  298 (591)
Q Consensus       268 ~~l~~~~~a~~~~~~~g~~~~~~~v~~~~~~  298 (591)
                      .+++.+.++++++.++|.....+++|+++.+
T Consensus        11 ~l~~~~l~~~lvG~~~g~~~~~l~~~l~~~l   41 (90)
T PF11808_consen   11 RLLLLLLAAALVGWLFGHLWWALLLGLLLYL   41 (90)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            3455667777778888888777777665543

This family is only found in bacteria. ; GO: 0004673 protein histidine kinase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	591
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		9e-09
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		1e-08
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		1e-08
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-07
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		5e-07
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		9e-07
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		2e-06
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		3e-06
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		3e-06
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		3e-06
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		6e-06
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		8e-06
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		2e-05
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		3e-05
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		6e-05
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		7e-05
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		1e-04
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		4e-04
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		4e-04

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +++ Y++ AM  HPD+N G+++A   FK+++ AYEVL DS K
Sbjct: 4   DYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 501 RKAYD 505
           R AYD
Sbjct: 62  RAAYD 66

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +++ Y++ AM  HPD+N G+++A   FK+++ AYEVL DS K
Sbjct: 4   DYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 501 RKAYD 505
           R AYD
Sbjct: 62  RAAYD 66

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +++ Y++ AM  HPD+N G+++A   FK+++ AYEVL DS K
Sbjct: 4   DYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 501 RKAYD 505
           R AYD
Sbjct: 62  RAAYD 66

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRK 502
           Y  LGL +  N     +K+ YRK A+  HPDKN  N +A + FK++ NA+ +L D+ KR 
Sbjct: 20  YHVLGLDK--NATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77
Query: 503 AYD 505
            YD
Sbjct: 78  IYD 80

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 435 RLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEV 494
           R  +  D+Y+ LG     +V+  IL  E++ +A+  HPDK+  N KAVE F+KLQ A E+
Sbjct: 15  RSEDTEDYYTLLGCDELSSVE-QILA-EFKVRALECHPDKHPENPKAVETFQKLQKAKEI 72
Query: 495 LFDSFKRKAYDDELRREELLDYFRRFQS 522
           L +   R  Y D  RR ++   F+++++
Sbjct: 73  LTNEESRARY-DHWRRSQMSMPFQQWEA 99

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  N     +K+ Y + A   HPD N  + KA E F +L  AYEVL D  K
Sbjct: 8   DYYQILGVPR--NASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK 65
Query: 501 RKAYD 505
           RK YD
Sbjct: 66  RKQYD 70

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR        LK+ YR+ A+  HPDKN     A EAFK +  AY VL +  K
Sbjct: 8   DYYEILGVSR--GASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEK 64
Query: 501 RKAYD 505
           RK YD
Sbjct: 65  RKQYD 69

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 23/103 (22%)
Query: 442 HYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFK 500
           +Y  L + R  + D   +K+ YR+KA+  HPDKN  N E A + FK++  AYEVL D  K
Sbjct: 4   YYEILDVPRSASAD--DIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEAD 543
           R+ YD                    + GR G  G+G   S A+
Sbjct: 62  REIYD--------------------RYGREGLTGTGTGPSRAE 84

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGL+R        +KR YR++A+  HPDKN     A E FK++  AY+VL D  K
Sbjct: 4   DYYQTLGLAR--GASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60
Query: 501 RKAYD 505
           R+ +D
Sbjct: 61  REIFD 65

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T +Y  LG+    N     LK+ YRK A+  HPDKN  NE   E FK++  AYEVL D+ 
Sbjct: 6   TTYYDVLGVK--PNATQEELKKAYRKLALKYHPDKN-PNEG--EKFKQISQAYEVLSDAK 60
Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 61  KRELYD 66

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDS 498
            D+Y  L + R        +K+ YRK A+  HPDKN  N E+A   FK++  AYEVL D+
Sbjct: 9   VDYYEVLDVPR--QASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA 66
Query: 499 FKRKAYD 505
            KR  YD
Sbjct: 67  KKRDIYD 73

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T +Y  LG+    +   + LK+ YRK A+  HPDKN       E FK++  AYEVL D  
Sbjct: 8   TGYYDVLGVK--PDASDNELKKAYRKMALKFHPDKN---PDGAEQFKQISQAYEVLSDEK 62
Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 63  KRQIYD 68

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDS 498
            ++Y  LG+    +     +K+ YRK A+  HPDKN  N E+A + FK +  AYEVL DS
Sbjct: 9   ANYYEVLGVQ--ASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDS 66
Query: 499 FKRKAYD 505
            KR  YD
Sbjct: 67  KKRSLYD 73

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN------EKAVEAFKKLQNAYEV 494
           D YS LG     + ++S LK++Y+K  ++ HPDK   +      E+ V+ F ++  A+++
Sbjct: 11  DWYSILGAD--PSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68
Query: 495 LFDSFKRKAYD-----DELRREELLDYFRRFQSASQKNGRHGFF-----GSGYARSEADC 544
           L +   ++ YD     D+LR    +D     +  S   G H F+     G  Y+ S+ + 
Sbjct: 69  LGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKYSVSKDEA 128
Query: 545 DDPFGESRRIACKKCN 560
           +    E   I+C  C+
Sbjct: 129 E----EVSLISCDTCS 140

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRK 502
           YS LG+S+        +++ ++K A+ +HPDKN  N  A   F K+  AYEVL D   RK
Sbjct: 24  YSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81
Query: 503 AYD 505
            YD
Sbjct: 82  KYD 84

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T  Y  LG+S   N     LK+ YRK A+  HPDK  G+    E FK++  A+E+L D  
Sbjct: 8   TKLYDLLGVSPSANEQE--LKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQ 62
Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 63  KREIYD 68

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 443 YSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRK 502
           YS LG+S+        +++ ++K A+ +HPDKN  N  A   F K+  AYEVL D   RK
Sbjct: 5   YSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 503 AYD 505
            YD
Sbjct: 63  KYD 65

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 459 LKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELL 514
           +K  Y ++  L HPD+N G+ +A E F ++  AY VL  +  R+ YD  L  +E L
Sbjct: 34  IKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDL 89

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLF 496
           +   D+Y+ LG+   +  D+  +K  YR+ A   HPD +  N+ A   FK L  A+EVL 
Sbjct: 25  MELKDYYAILGVQPTD--DLKTIKTAYRRLARKYHPDVSKEND-AEAKFKDLAEAWEVLK 81
Query: 497 DSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGF 532
           D  +R  YD   +      + R+ Q+  Q   +  F
Sbjct: 82  DEQRRAEYDQLWQHRNDPGFGRQRQTHEQSYSQQDF 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	591
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-20
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-20
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-19
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	1e-18
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	4e-18
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	4e-18
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	6e-18
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-17
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	2e-17
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-17
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	3e-17
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	4e-17
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	5e-17
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	6e-17
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-16
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	1e-16
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	3e-16
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	3e-16
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	1e-15
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	2e-15
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	3e-15
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	4e-15
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	5e-15
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-14
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	1e-14
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-13
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	9e-12
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	1e-11
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	2e-10
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-10
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	3e-10
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	4e-07
2guz_A	71	Mitochondrial import inner membrane translocase su	7e-06
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-05

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 85.9 bits (213), Expect = 1e-20
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 416 GVPSTSGDDSEMTSE--DEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPD 473
           G   +SG  +  T E  D + R+ N  D +  LG+          + + YRK A+L+HPD
Sbjct: 1   GSSGSSGSSASFTKEQADAIRRIRNSKDSWDMLGVKP--GASRDEVNKAYRKLAVLLHPD 58

Query: 474 KNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYD 505
           K      + +AFK + NA   L  + K     
Sbjct: 59  KC-VAPGSEDAFKAVVNARTALLKNIKSGPSS 89

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 86.3 bits (214), Expect = 1e-20
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y+ LG        V  +  E++ +A+  HPDK+  N KAVE F+KLQ A E+L +   
Sbjct: 21  DYYTLLGCDE--LSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEES 78

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFG 534
           R  Y D  RR ++   F+++++ +      G   
Sbjct: 79  RARY-DHWRRSQMSMPFQQWEALNDSVKTSGPSS 111

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 83.4 bits (207), Expect = 1e-19
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +++ Y++ AM  HPD+N G+++A   FK+++ AYEVL DS K
Sbjct: 4   DYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADC-DDPFGE 550
           R AYD             ++  A+ + G  G  G G     +D   D FG+
Sbjct: 62  RAAYD-------------QYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGD 99

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 80.2 bits (198), Expect = 1e-18
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T  Y  LG+        + +K  Y ++  L HPD+N G+ +A E F ++  AY VL  + 
Sbjct: 17  TALYDLLGVPS--TATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSAT 74

Query: 500 KRKAYD 505
            R+ YD
Sbjct: 75  LRRKYD 80

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 78.1 bits (193), Expect = 4e-18
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+ R  N     +K+ Y + A   HPD N  + KA E F +L  AYEVL D  K
Sbjct: 8   DYYQILGVPR--NASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK 65

Query: 501 RKAYD 505
           RK YD
Sbjct: 66  RKQYD 70

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 79.5 bits (196), Expect = 4e-18
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
                 LGL R    ++ ++++ Y KK    HPDK  G+E   E  KK+   Y+ + D  
Sbjct: 8   LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG-GDE---EKMKKMNTLYKKMEDGV 63

Query: 500 KRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFG 549
           K              D+   + +          +   +  +  + ++ F 
Sbjct: 64  KYAHQP---------DFGGFWDATEIPTYGTDEWEQWW--NAFNEENLFC 102

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 78.6 bits (194), Expect = 6e-18
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
             Y  LGL +  N     +K+ YRK A+  HPDKN  N +A + FK++ NA+ +L D+ K
Sbjct: 18  SLYHVLGLDK--NATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATK 75

Query: 501 RKAYD 505
           R  YD
Sbjct: 76  RNIYD 80

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 79.6 bits (196), Expect = 2e-17
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 18/153 (11%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
                LGL R    ++ ++++ Y KK    HPDK  G+E   E  KK+   Y+ + D  K
Sbjct: 12  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG-GDE---EKMKKMNTLYKKMEDGVK 67

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKC- 559
                D     +  + F    +            + Y +   +C      S    C  C 
Sbjct: 68  YAHQPDFGGFWDATEVFASSLN--------PGVDAIYCKQWPECVK--KMSTNCICLLCL 117

Query: 560 -NNFHVWIETKKSKASARWCQVFIFAFCTYMWF 591
               H   +  +      W   + F  C  MWF
Sbjct: 118 LRMKHENRKLYRKDPLV-WVDCYCF-DCFRMWF 148

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 22/135 (16%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN------EKAVEAFKKLQNAYEV 494
           D YS LG     + ++S LK++Y+K  ++ HPDK   +      E+ V+ F ++  A+++
Sbjct: 11  DWYSILGADP--SANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68

Query: 495 LFDSFKRKAYD-----DELRREELLDYFRRFQSASQKNGRHGF-----FGSGYARSEADC 544
           L +   ++ YD     D+LR    +D     +  S   G H F      G  Y+ S+   
Sbjct: 69  LGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKYSVSK--- 125

Query: 545 DDPFGESRRIACKKC 559
            D   E   I+C  C
Sbjct: 126 -DEAEEVSLISCDTC 139

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 76.1 bits (188), Expect = 2e-17
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA-FKKLQNAYEVLFDSF 499
           D+Y  L + R        +K+ YRK A+  HPDKN  N++  E  FK++  AYEVL D+ 
Sbjct: 10  DYYEVLDVPR--QASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAK 67

Query: 500 KRKAYD 505
           KR  YD
Sbjct: 68  KRDIYD 73

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 76.2 bits (188), Expect = 3e-17
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA-FKKLQNAYEVLFDSF 499
            +Y  L + R  +     +K+ YR+KA+  HPDKN  N++  E  FK++  AYEVL D  
Sbjct: 3   SYYEILDVPR--SASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKH 60

Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 61  KREIYD 66

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 75.8 bits (187), Expect = 4e-17
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA-FKKLQNAYEVLFDSF 499
           ++Y  LG+    +     +K+ YRK A+  HPDKN  N++  E  FK +  AYEVL DS 
Sbjct: 10  NYYEVLGVQA--SASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK 67

Query: 500 KRKAYD 505
           KR  YD
Sbjct: 68  KRSLYD 73

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 75.9 bits (187), Expect = 5e-17
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA---FKKLQNAYEVLFD 497
           + Y  L ++R E  D   L + YR  A   HPD+    E+ + A   F+ +  AYE L D
Sbjct: 16  NCYDVLEVNR-EEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKD 74

Query: 498 SFKRKAYDD-----ELRREELLDYFRRFQS 522
              +  YD      + R      Y+R   +
Sbjct: 75  DEAKTNYDYYLDHPDQRFYNYYQYYRLRAA 104

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 78.8 bits (194), Expect = 6e-17
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 15/96 (15%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           + YS LG+S+        +++ ++K A+ +HPDKN  N  A   F K+  AYEVL D   
Sbjct: 3   NFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 60

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSG 536
           RK YD             ++     ++ + G + S 
Sbjct: 61  RKKYD-------------KYGEKGLEDNQGGQYESW 83

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 74.8 bits (184), Expect = 1e-16
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 13/91 (14%)

Query: 421 SGDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-- 478
           S   S M  E  + +     D YS LG     + ++S LK++Y+K  +L HPDK   +  
Sbjct: 2   SSGSSGMALEQTLKK-----DWYSILGADP--SANMSDLKQKYQKLILLYHPDKQSADVP 54

Query: 479 ----EKAVEAFKKLQNAYEVLFDSFKRKAYD 505
               E+ ++ F ++  A+++L +   +K YD
Sbjct: 55  AGTMEECMQKFIEIDQAWKILGNEETKKKYD 85

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T  Y  LG+S   + +   LK+ YRK A+  HPDK  G+    E FK++  A+E+L D  
Sbjct: 8   TKLYDLLGVSP--SANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQ 62

Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 63  KREIYD 68

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGL+R        +KR YR++A+  HPDKN     A E FK++  AY+VL D  K
Sbjct: 4   DYYQTLGLAR--GASDEEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRK 60

Query: 501 RKAYD 505
           R+ +D
Sbjct: 61  REIFD 65

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 72.3 bits (178), Expect = 3e-16
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSF 499
           T +Y  LG+    +   + LK+ YRK A+  HPDKN       E FK++  AYEVL D  
Sbjct: 8   TGYYDVLGVKP--DASDNELKKAYRKMALKFHPDKNPDGA---EQFKQISQAYEVLSDEK 62

Query: 500 KRKAYD 505
           KR+ YD
Sbjct: 63  KRQIYD 68

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+SR        LK+ YR+ A+  HPDKN     A EAFK +  AY VL +  K
Sbjct: 8   DYYEILGVSR--GASDEDLKKAYRRLALKFHPDKNHAPG-ATEAFKAIGTAYAVLSNPEK 64

Query: 501 RKAYD 505
           RK YD
Sbjct: 65  RKQYD 69

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 70.9 bits (174), Expect = 2e-15
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSF 499
           +  S +  +    +  S  K+  R+  +  HPDKN  N + A E FK LQN    L    
Sbjct: 17  EVTSVVEQAW--KLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---E 71

Query: 500 KRKAYD 505
           K+   D
Sbjct: 72  KQAFLD 77

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 70.0 bits (172), Expect = 3e-15
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
            +Y  LG+ +  +     +K+ + K AM  HPDKN  +  A   F+++  AYE L D+ +
Sbjct: 8   SYYDILGVPK--SASERQIKKAFHKLAMKYHPDKN-KSPDAEAKFREIAEAYETLSDANR 64

Query: 501 RKAYD 505
           RK YD
Sbjct: 65  RKEYD 69

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score = 75.7 bits (187), Expect = 4e-15
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 17/111 (15%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y+ LG+      D+  +K  YR+ A   HPD +  N+ A   FK L  A+EVL D  +
Sbjct: 29  DYYAILGVQP--TDDLKTIKTAYRRLARKYHPDVSKEND-AEAKFKDLAEAWEVLKDEQR 85

Query: 501 RKAYDDELRREELLDYFRRF-QSASQKNGRHGFFGSGYARSEADCDDPFGE 550
           R  YD             +  Q  +             + S+ D DD F  
Sbjct: 86  RAEYD-------------QLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSS 123

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 69.7 bits (171), Expect = 5e-15
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D Y  LG+SR      + +K+ Y+K A   HPDKN  +  A + F ++  AYE+L +  K
Sbjct: 18  DPYRVLGVSR--TASQADIKKAYKKLAREWHPDKN-KDPGAEDRFIQISKAYEILSNEEK 74

Query: 501 RKAYD 505
           R  YD
Sbjct: 75  RTNYD 79

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 70.8 bits (173), Expect = 1e-14
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 5/78 (6%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-----EKAVEAFKKLQNAYEVL 495
           D+++  GL     +D   L   ++      HPDK           AV+    +  A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 496 FDSFKRKAYDDELRREEL 513
                R  Y   L   +L
Sbjct: 62  RHPLMRAEYLLSLHGFDL 79

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 72.5 bits (177), Expect = 2e-13
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           + YS LG+S+        +++ ++K A+ +HPDKN  N  A   F K+  AYEVL D   
Sbjct: 22  NFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 79

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFF 533
           RK YD    +    +   +++S S      G +
Sbjct: 80  RKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIY 112

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 63.1 bits (153), Expect = 9e-12
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 440 TDHYSALGLSRFE-----NVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEV 494
           +  Y     +  +      +D S L++EYR+     HPD         E    L  AY  
Sbjct: 11  STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGS---EQSSTLNQAYHT 67

Query: 495 LFDSFKRKAYDDELRR 510
           L D  +R  Y  +L R
Sbjct: 68  LKDPLRRSQYMLKLLR 83

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 60.0 bits (145), Expect = 1e-11
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
                L L R    D   +++ Y+++++L+HPDK  G+       ++L + +        
Sbjct: 12  RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSH---ALMQELNSLWGTFKTEVY 67

Query: 501 RKAYD 505
               +
Sbjct: 68  NLRMN 72

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 59.1 bits (142), Expect = 2e-10
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 448 LSRFENVDVSILKREYRKKAMLVHPDKNMGNEK---AVEAFKKLQNAYEVLFDSFKRKAY 504
           +   + V    +K+ YRK  ++VHPDK  G      A   F +L +A+    +  ++  Y
Sbjct: 123 VGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 59.7 bits (144), Expect = 2e-10
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-----EKAVEAFKKLQNAYEVL 495
           D++S +  +R   VD + L+  Y++   LVHPD          + + +    + +AY+ L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 496 FDSFKRKAYDDELRREELLDYFR 518
                R  Y  +L   E+ +   
Sbjct: 104 LAPLSRGLYLLKLHGIEIPERTD 126

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 61.6 bits (150), Expect = 3e-10
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE---KAVEAFKKLQNAYEVLFD 497
           D+Y  LG+ R  N     + + YRK A+  HPD     E   KA + F  +  A EVL D
Sbjct: 383 DYYKILGVKR--NAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSD 440

Query: 498 SFKRKAYD 505
              RK +D
Sbjct: 441 PEMRKKFD 448

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 448 LSRFENVDVSILKREYRKKAMLVHPDKNMGNEK---AVEAFKKLQNAYEVL 495
           +   + V    +K+ YRK  ++VHP K  G      A   F +L +A+   
Sbjct: 39  VGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEF 89

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 15/81 (18%)

Query: 422 GDDSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKA 481
           G D +M S++              L L+    +    LK  +RK  +  HPDK  G+   
Sbjct: 6   GFDPKMNSKE----------ALQILNLTE-NTLTKKKLKEVHRKIMLANHPDKG-GSP-- 51

Query: 482 VEAFKKLQNAYEVLFDSFKRK 502
                K+  A + L      K
Sbjct: 52  -FLATKINEAKDFLEKRGISK 71

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 10/55 (18%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 448 LSRFENVDVSILKREYRKKAMLVHPDKNMGN-------EKAVEAFKKLQNAYEVL 495
           +   + ++ + +++ Y++  +++HPDK             A + F+ LQ A++  
Sbjct: 46  VPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHF 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	591
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.82
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.78
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.78
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.77
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.76
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.75
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.75
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.75
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.74
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.74
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.74
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.74
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.74
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.74
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.73
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.73
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.72
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.71
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.62
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.61
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.6
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.6
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.59
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.58
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.57
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.57
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.57
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.55
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.52
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.49
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.46
2guz_A	71	Mitochondrial import inner membrane translocase su	99.46
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.03
2guz_B	65	Mitochondrial import inner membrane translocase su	98.45
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	90.52
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	86.27
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	83.75

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.82  E-value=6.4e-21  Score=176.74  Aligned_cols=132  Identities=20%  Similarity=0.321  Sum_probs=93.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHHH
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE------KAVEAFKKLQNAYEVLFDSFKRKAYDDELRREE  512 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p------~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~ee  512 (591)
                      ..|||+||||++  +++.++||+|||+|++++||||++..+      .|.+.|++|++||++|+||.+|+.||..+....
T Consensus         9 ~~~~y~iLgv~~--~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~   86 (155)
T 2l6l_A            9 KKDWYSILGADP--SANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDD   86 (155)
T ss_dssp             CSHHHHHHTCCT--TCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHH
T ss_pred             CCChhHhcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhh
Confidence            479999999999  899999999999999999999997643      377999999999999999999999999776544


Q ss_pred             HHHHHhhhhccccCCCCCCCCCCCCCCCCCCCCCCcccccccccccccccceeeecccccccccccccccceeEEE
Q 007732          513 LLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTY  588 (591)
Q Consensus       513 ~~~~f~~f~~~~~~~g~~gffg~gf~~s~~~~e~~~~~sr~I~C~~C~Gtg~~~~T~~~~skar~C~~C~GsF~ay  588 (591)
                      ...     . ..   ....+.-..+...      .-....+..|+ |++.+.+............|++|...|...
T Consensus        87 ~~~-----~-~~---~~~~~~~~~m~~~------e~~~~f~~~Cr-CG~~f~i~~~~l~~~~~v~C~sCSl~~~v~  146 (155)
T 2l6l_A           87 LRN-----V-GP---VDAQVYLEEMSWN------EGDHSFYLSCR-CGGKYSVSKDEAEEVSLISCDTCSLIIELL  146 (155)
T ss_dssp             HHT-----T-CS---SSEEEETTTSEEE------TTTTEEEEECS-SSCEEEEETTHHHHCCEEECSSSSCEEEEE
T ss_pred             ccc-----c-cc---ccceeeHHHhccc------cCCcEEEEcCC-CCCeEEecHHHhCCCCEEECCCCceEEEEE
Confidence            322     0 00   0000100011000      01235678996 999765533322122678999999988653

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.78  E-value=1.8e-19  Score=156.10  Aligned_cols=71  Identities=34%  Similarity=0.583  Sum_probs=66.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhHHH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREE  512 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~ee  512 (591)
                      .|||+||||++  +++.++||+|||+|++++|||++++++.+.++|++|++||++|+||.+|+.||+.+..++
T Consensus        17 ~~~Y~vLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e   87 (99)
T 2yua_A           17 TALYDLLGVPS--TATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDE   87 (99)
T ss_dssp             SHHHHHHTCCT--TCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHH
T ss_pred             cCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccc
Confidence            78999999999  899999999999999999999998778999999999999999999999999999765544

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=2.2e-19  Score=148.81  Aligned_cols=68  Identities=43%  Similarity=0.593  Sum_probs=64.3

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +++.++||++||++++++|||+++.++.+.+.|++|++||++|+||.+|+.||..+
T Consensus         6 ~~~~y~iLgv~~--~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g   73 (79)
T 2dn9_A            6 SGDYYQILGVPR--NASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG   73 (79)
T ss_dssp             CSCHHHHHTCCT--TCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred             CCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence            379999999999  89999999999999999999999877889999999999999999999999999853

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=5.3e-19  Score=156.49  Aligned_cols=69  Identities=39%  Similarity=0.536  Sum_probs=65.4

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR  510 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~  510 (591)
                      .|||+||||++  +++.++||+|||+|++++||||+++++.++++|++|++||++|+||.+|+.||+.+..
T Consensus        20 ~d~Y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~   88 (112)
T 2ctq_A           20 EDYYTLLGCDE--LSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS   88 (112)
T ss_dssp             CCHHHHTTCCT--TSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence            79999999999  8999999999999999999999987788999999999999999999999999997643

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.76  E-value=3.2e-19  Score=152.05  Aligned_cols=70  Identities=31%  Similarity=0.517  Sum_probs=64.0

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN------EKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~------p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      ...|||+||||++  +++.+|||+|||++++++|||+++.+      +.+.+.|++|++||++|+||.+|+.||..+.
T Consensus        14 ~~~~~y~iLgv~~--~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           14 LKKDWYSILGADP--SANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCT--TCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCChHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            3489999999999  89999999999999999999998642      5688999999999999999999999998654

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.75  E-value=8.8e-19  Score=144.69  Aligned_cols=66  Identities=42%  Similarity=0.649  Sum_probs=62.3

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||+|||++++++|||+++ ++.+.+.|++|++||++|+||.+|+.||+.+
T Consensus         3 ~~~y~iLgv~~--~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   68 (77)
T 1hdj_A            3 KDYYQTLGLAR--GASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYG   68 (77)
T ss_dssp             CCSHHHHTCCT--TCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence            68999999999  899999999999999999999997 4789999999999999999999999999854

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=8.7e-19  Score=145.04  Aligned_cols=67  Identities=45%  Similarity=0.601  Sum_probs=63.1

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +++.++||++||++++++|||+++ .+.+.+.|++|++||++|+||.+|+.||+.+
T Consensus         6 ~~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~   72 (78)
T 2ctp_A            6 SGDYYEILGVSR--GASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFG   72 (78)
T ss_dssp             SCCHHHHHTCCT--TCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred             CCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence            479999999999  899999999999999999999997 4789999999999999999999999999854

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=2.4e-18  Score=147.03  Aligned_cols=75  Identities=32%  Similarity=0.523  Sum_probs=67.5

Q ss_pred             CCCcH--HHHHHHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHh
Q 007732          426 EMTSE--DEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKA  503 (591)
Q Consensus       426 ~~ts~--~ev~ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~  503 (591)
                      .++..  +.+.+++...|||+||||++  +++.+|||+|||+|++++||||++ ++.+.++|++|++||++|+||.+|+.
T Consensus        11 ~~s~~~~~~~~~~~~~~~~y~iLgv~~--~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           11 SFTKEQADAIRRIRNSKDSWDMLGVKP--GASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CCCHHHHHHHHHHHTCSSHHHHHTCCT--TCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHHHHHHHhcCCCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCcccccC
Confidence            34444  56778899999999999999  899999999999999999999997 47899999999999999999999865

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.74  E-value=1.6e-18  Score=147.08  Aligned_cols=67  Identities=34%  Similarity=0.546  Sum_probs=63.4

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||||++  +++.++||++||+|++++|||+++ ++.+.+.|++|++||++|+||.+|+.||..+
T Consensus         6 ~~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   72 (88)
T 2ctr_A            6 SGSYYDILGVPK--SASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLG   72 (88)
T ss_dssp             CCSHHHHHTCCT--TCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTC
T ss_pred             CCCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence            379999999999  899999999999999999999997 5889999999999999999999999999864

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1.2e-18  Score=145.25  Aligned_cols=67  Identities=43%  Similarity=0.612  Sum_probs=62.5

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||+|||++++++|||+++.. +.+++.|++|++||++|+||.+|+.||..+
T Consensus         9 ~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g   76 (82)
T 2ej7_A            9 VDYYEVLDVPR--QASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG   76 (82)
T ss_dssp             CCHHHHTTCCT--TCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred             cCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence            79999999999  89999999999999999999999765 468899999999999999999999999853

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.74  E-value=1.6e-18  Score=141.91  Aligned_cols=68  Identities=41%  Similarity=0.625  Sum_probs=61.3

Q ss_pred             HhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          436 LLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       436 il~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      |....|||+||||++  +++.++||++||++++++|||++++.   .+.|++|++||++|+||.+|+.||+.+
T Consensus         4 m~~~~~~y~iLgl~~--~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g   71 (73)
T 2och_A            4 MVKETGYYDVLGVKP--DASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG   71 (73)
T ss_dssp             --CCCCHHHHHTCCT--TCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred             ccCCCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence            456689999999999  89999999999999999999999643   689999999999999999999999853

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.74  E-value=1.8e-18  Score=146.80  Aligned_cols=66  Identities=38%  Similarity=0.537  Sum_probs=62.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||++||++++++|||+++. +.+++.|++|++||++|+||.+|+.||..+
T Consensus        17 ~d~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g   82 (88)
T 2cug_A           17 FDPYRVLGVSR--TASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYG   82 (88)
T ss_dssp             SCHHHHHTCCT--TCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence            79999999999  8999999999999999999999974 789999999999999999999999999854

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.74  E-value=2.2e-18  Score=147.46  Aligned_cols=69  Identities=39%  Similarity=0.621  Sum_probs=62.5

Q ss_pred             HHhCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          435 RLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       435 ril~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .++...|||+||||++  +++.++||++||+|++++|||+++++   .+.|++|++||++|+||.+|+.||+..
T Consensus         3 ~m~~~~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~   71 (92)
T 2o37_A            3 AMVKETKLYDLLGVSP--SANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYG   71 (92)
T ss_dssp             -CCSCCHHHHHHTCCT--TCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHC
T ss_pred             ccccCCCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHC
Confidence            3456689999999999  89999999999999999999999754   579999999999999999999999865

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.74  E-value=1.9e-18  Score=152.38  Aligned_cols=67  Identities=40%  Similarity=0.605  Sum_probs=64.2

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||+|||+|++++|||++++++.+.++|++|++||++|+||.+|+.||...
T Consensus        17 ~~~Y~vLgv~~--~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g   83 (109)
T 2ctw_A           17 ESLYHVLGLDK--NATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYG   83 (109)
T ss_dssp             CCHHHHHTCCT--TCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTC
T ss_pred             CCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhc
Confidence            78999999999  89999999999999999999999877899999999999999999999999999854

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.73  E-value=4.3e-18  Score=148.23  Aligned_cols=67  Identities=42%  Similarity=0.609  Sum_probs=62.7

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||+|||++++++|||+++.. +.+++.|++|++||++|+||.+|+.||..+
T Consensus         2 ~d~Y~iLgv~~--~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g   69 (99)
T 2lgw_A            2 ASYYEILDVPR--SASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYG   69 (99)
T ss_dssp             CCHHHHSSSCT--TSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence            68999999999  89999999999999999999999754 468899999999999999999999999864

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=2.6e-18  Score=146.47  Aligned_cols=67  Identities=43%  Similarity=0.597  Sum_probs=62.5

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||++||+|++++|||+++.. +.+++.|++|++||++|+||.+|+.||+..
T Consensus         9 ~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~   76 (92)
T 2dmx_A            9 ANYYEVLGVQA--SASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAG   76 (92)
T ss_dssp             CCHHHHHTCCT--TCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHC
T ss_pred             cCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence            79999999999  89999999999999999999999754 578999999999999999999999999853

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.72  E-value=1.1e-18  Score=152.12  Aligned_cols=67  Identities=42%  Similarity=0.694  Sum_probs=63.8

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +++.++||++||+|++++|||+++.++.++++|++|++||++|+||.+|+.||+..
T Consensus         3 ~~~y~iLgv~~--~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~   69 (103)
T 1bq0_A            3 QDYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG   69 (103)
T ss_dssp             CCSTTTTSSCS--SCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTST
T ss_pred             CCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence            68999999999  89999999999999999999999876889999999999999999999999999864

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.71  E-value=5.6e-18  Score=148.72  Aligned_cols=70  Identities=31%  Similarity=0.424  Sum_probs=64.6

Q ss_pred             CCCcccccCcccCCCC-CHHHHHHHHHHHHHhhCCCCCCC---chHHHHHHHHHHHHHHHhhhhhhHHhhhhHhhH
Q 007732          439 CTDHYSALGLSRFENV-DVSILKREYRKKAMLVHPDKNMG---NEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRR  510 (591)
Q Consensus       439 ~~DyYeILGV~~~~~A-s~eeIKKAYRKLAlk~HPDKn~~---~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~~  510 (591)
                      ..|||+||||++  ++ +.++||+|||++++++|||++++   .+.+.+.|++|++||++|+||.+|+.||+.+..
T Consensus        14 ~~~~y~iLgv~~--~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           14 LENCYDVLEVNR--EEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TSCHHHHTTCCG--GGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             CCCHHHHcCCCC--CCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            479999999999  78 99999999999999999999975   367889999999999999999999999997754

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.69  E-value=1.5e-17  Score=157.31  Aligned_cols=67  Identities=39%  Similarity=0.570  Sum_probs=64.1

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +|+.++||+|||++++++||||+++++.+.++|++|++||++|+||.+|+.||+..
T Consensus         2 ~~~y~~l~~~~--~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~   68 (210)
T 3apq_A            2 QNFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYG   68 (210)
T ss_dssp             CCHHHHHTCCT--TCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhc
Confidence            68999999999  89999999999999999999999877899999999999999999999999999864

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.61  E-value=3.9e-17  Score=169.03  Aligned_cols=70  Identities=34%  Similarity=0.541  Sum_probs=0.0

Q ss_pred             hCCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          437 LNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       437 l~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      +..+|||+||||++  +|+.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||++|+.||+++.
T Consensus        25 m~~~d~Y~vLgv~~--~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~   94 (329)
T 3lz8_A           25 MELKDYYAILGVQP--TDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ   94 (329)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             ccccCHHHHcCcCC--CCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence            34589999999999  899999999999999999999997 46899999999999999999999999999743

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.60  E-value=5.5e-16  Score=151.31  Aligned_cols=69  Identities=26%  Similarity=0.340  Sum_probs=61.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-----KAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p-----~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++..+++.++||++||+|++++||||+++.+     .|.+.|++|++||++|+||.+|+.||..+
T Consensus        43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l  116 (207)
T 3bvo_A           43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKL  116 (207)
T ss_dssp             CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence            7999999999955589999999999999999999997543     25678999999999999999999999754

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.60  E-value=3.7e-16  Score=148.16  Aligned_cols=69  Identities=23%  Similarity=0.347  Sum_probs=60.6

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK-----AVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~-----A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      |||+||||++.+++|.++||++||+++++|||||+++.+.     |.+.|+.|++||++|+||.+|+.||..+.
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            7999999999333399999999999999999999976533     56799999999999999999999998653

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.59  E-value=3.2e-16  Score=134.32  Aligned_cols=64  Identities=28%  Similarity=0.224  Sum_probs=57.4

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYD  505 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD  505 (591)
                      .++|+||||++  +++.+|||+|||+|+++||||+++++ +.|+++|++|++||++|+|+..|..+.
T Consensus        16 ~~~y~vLgv~~--~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~~   80 (88)
T 1iur_A           16 KEVTSVVEQAW--KLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNA   80 (88)
T ss_dssp             HHHHHHHHHTT--SSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSSS
T ss_pred             HHHHHHhCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            57899999999  89999999999999999999999865 458999999999999999987774433

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.58  E-value=9.9e-16  Score=128.34  Aligned_cols=60  Identities=18%  Similarity=0.346  Sum_probs=55.1

Q ss_pred             CCcccccCcccCCC--CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhh
Q 007732          440 TDHYSALGLSRFEN--VDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYD  505 (591)
Q Consensus       440 ~DyYeILGV~~~~~--As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD  505 (591)
                      .++|+||||++  +  ++.++||+|||+|++++|||+++.    .++|++|++||++|+|+.+|..++
T Consensus        11 ~~~y~iLgl~~--~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A           11 ERLLELLKLPR--QLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHTCCS--SSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence            57899999999  7  999999999999999999999853    589999999999999999998854

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.57  E-value=1.9e-16  Score=141.72  Aligned_cols=61  Identities=30%  Similarity=0.401  Sum_probs=57.0

Q ss_pred             CCcccccCcccCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhh
Q 007732          440 TDHYSALGLSRFENVDV--SILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~--eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~  506 (591)
                      .+||+||||++  +++.  ++||+|||+|++++||||++.    +++|++|++||++|+||.+|+.||.
T Consensus         8 ~~~Y~iLgv~~--~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~   70 (114)
T 1gh6_A            8 LQLMDLLGLER--SAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPD   70 (114)
T ss_dssp             HHHHHHTTCCT--TSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSC
T ss_pred             hhHHHHcCCCC--CCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhh
Confidence            68999999999  7777  999999999999999999974    5899999999999999999999996

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.57  E-value=7.7e-16  Score=148.11  Aligned_cols=63  Identities=27%  Similarity=0.479  Sum_probs=58.8

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchH---HHHHHHHHHHHHHHhhhhhhHHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEK---AVEAFKKLQNAYEVLFDSFKRKAY  504 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~---A~e~Fk~I~eAYEVLsDp~KR~~Y  504 (591)
                      .|||+||||++  +++.++||+|||++++++||||+++.+.   |+++|++|++||++|+||.+|+.|
T Consensus       117 ~d~Y~vLgv~~--~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMAD--LVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGG--GSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCC--CCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            58999999999  8999999999999999999999976543   889999999999999999999987

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.57  E-value=6.6e-16  Score=133.87  Aligned_cols=61  Identities=26%  Similarity=0.437  Sum_probs=54.7

Q ss_pred             HHhCC-CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHHHHHHHhhh
Q 007732          435 RLLNC-TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE---KAVEAFKKLQNAYEVLFD  497 (591)
Q Consensus       435 ril~~-~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p---~A~e~Fk~I~eAYEVLsD  497 (591)
                      .++.. .++|++|||++  .++.+|||+|||++|++|||||+++++   .|+++|++|++||++|.+
T Consensus        27 ~~L~~~~~~y~~Lgv~~--~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           27 TVLWAGETKWKPVGMAD--LVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             GTSCTTCCSCCCCCGGG--SSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcccccCCeecCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            55555 49999999999  899999999999999999999998654   388999999999999986

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.55  E-value=6.5e-16  Score=147.66  Aligned_cols=63  Identities=29%  Similarity=0.378  Sum_probs=55.5

Q ss_pred             CCcccccCcccCCCCC--HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVD--VSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As--~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .|||+||||++  +|+  .+|||+|||++|+++||||+++    +++|++|++||++|+||.+|+.||++.
T Consensus        11 ~d~Y~vLGl~~--~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G   75 (174)
T 2pf4_E           11 LQLMDLLGLER--SAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFG   75 (174)
T ss_dssp             HHHHHTTTCCG--GGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGG
T ss_pred             ccHHHHcCCCC--CCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccC
Confidence            68999999999  666  6999999999999999999964    479999999999999999999999965

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.52  E-value=3.5e-15  Score=142.93  Aligned_cols=66  Identities=30%  Similarity=0.432  Sum_probs=60.0

Q ss_pred             CCCccccc------CcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSAL------GLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeIL------GV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      ..|||+||      |+++ .++|.++||++||+|++++||||+++   +.+.|++|++||++|+||.+|+.||..+
T Consensus        10 ~~d~y~ll~~~~p~~~~~-~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A           10 TSTFYELFPKTFPKKLPI-WTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             SCCTGGGCTTTCTTCSCC-SCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCHHHHhccccccCCCC-CCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            47999999      4665 37999999999999999999999974   7789999999999999999999999876

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.49  E-value=6.3e-15  Score=130.23  Aligned_cols=57  Identities=18%  Similarity=0.307  Sum_probs=50.9

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCC---ch----HHHHHHHHHHHHHHHhhhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMG---NE----KAVEAFKKLQNAYEVLFDSF  499 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~---~p----~A~e~Fk~I~eAYEVLsDp~  499 (591)
                      .|||+|||+++   |+.++||+|||++++++||||+++   ++    .|+++|++|++||++|+|+.
T Consensus        41 ~d~Y~vl~~~~---As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           41 SGWKPVPLMDM---IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             SCCCCCCGGGS---CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHcCCCC---CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            59999999985   899999999999999999999863   11    47899999999999999985

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.46  E-value=6.6e-15  Score=163.85  Aligned_cols=68  Identities=38%  Similarity=0.563  Sum_probs=40.3

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELR  509 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l~  509 (591)
                      .|||+||||++  +|+.+|||+|||+|++++||||+++++.|+++|++|++||++|+||.+|+.||+++.
T Consensus        21 ~~~y~~lg~~~--~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~   88 (780)
T 3apo_A           21 QNFYSLLGVSK--TASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE   88 (780)
T ss_dssp             --CHHHHTCCT--TCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--
T ss_pred             CCHHHHcCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc
Confidence            79999999999  899999999999999999999998778899999999999999999999999998653

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.46  E-value=2.4e-14  Score=117.42  Aligned_cols=58  Identities=24%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRK  502 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~  502 (591)
                      .++|+||||++. +++.++||++||+|++++|||++. +   .+.|++|++||++|+|+..|+
T Consensus        14 ~~~y~iLgl~~~-~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           14 KEALQILNLTEN-TLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHTTCCTT-TCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhcC
Confidence            578999999972 389999999999999999999974 3   469999999999999987663

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.03  E-value=1.5e-10  Score=114.98  Aligned_cols=67  Identities=37%  Similarity=0.512  Sum_probs=56.6

Q ss_pred             CCCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHHHHHHHhhhhhhHHhhhh
Q 007732          438 NCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN---EKAVEAFKKLQNAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       438 ~~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~---p~A~e~Fk~I~eAYEVLsDp~KR~~YD~  506 (591)
                      ...++|++||+.+  .++.++|+++|+++++++|||+.+.+   +.++++|+.|.+||++|+||++|..||+
T Consensus       380 ~~~~~y~~lg~~~--~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          380 QKRDYYKILGVKR--NAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             HSCCSGGGSCSST--TCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             cchhHHHHhCCCc--cCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            3569999999999  78899999999999999999999753   3488999999999999999999999997

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.45  E-value=2.1e-07  Score=75.97  Aligned_cols=52  Identities=12%  Similarity=0.086  Sum_probs=45.3

Q ss_pred             CcccccCcccCCC---CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhh
Q 007732          441 DHYSALGLSRFEN---VDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDS  498 (591)
Q Consensus       441 DyYeILGV~~~~~---As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp  498 (591)
                      .-|.||||++  +   ++.++||++||+|....||||.. +   .....+|++|+++|...
T Consensus         5 EA~~ILgv~~--~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            5 ESCKILNIEE--SKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHTTCCG--GGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCC--CcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHHH
Confidence            3488999999  7   89999999999999999999974 3   56778999999999754

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.52  E-value=0.23  Score=42.79  Aligned_cols=38  Identities=13%  Similarity=0.222  Sum_probs=28.6

Q ss_pred             CCCCcccccccccccccccceeeecccccccccccccccceeE
Q 007732          544 CDDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFC  586 (591)
Q Consensus       544 ~e~~~~~sr~I~C~~C~Gtg~~~~T~~~~skar~C~~C~GsF~  586 (591)
                      .+..+.+.+.+.|+.|+|++     .........|+.|+|+..
T Consensus        19 ~~~~i~~~~~~~C~~C~G~G-----~~~g~~~~~C~~C~G~G~   56 (104)
T 2ctt_A           19 VNKEFTVNIMDTCERCNGKG-----NEPGTKVQHCHYCGGSGM   56 (104)
T ss_dssp             SCTTCCSSCCEECSSSSSSS-----SCTTCCCEECSSSSSSCE
T ss_pred             CEEEEEeeeeeECCCCcCCc-----cCCCCCCccCCCCCCCEE
Confidence            34567888999999999986     344555678888888754

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=86.27  E-value=0.47  Score=38.45  Aligned_cols=17  Identities=12%  Similarity=0.223  Sum_probs=9.3

Q ss_pred             Ccccccccccccccccc
Q 007732          547 PFGESRRIACKKCNNFH  563 (591)
Q Consensus       547 ~~~~sr~I~C~~C~Gtg  563 (591)
                      .+.+.+.+.|+.|+|++
T Consensus         5 ~i~~~~~~~C~~C~G~G   21 (79)
T 1exk_A            5 EIRIPTLEECDVCHGSG   21 (79)
T ss_dssp             SCCCCCEEECGGGTTTS
T ss_pred             EEEcccceECCCCcccc
Confidence            34455555666666654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=83.75  E-value=0.65  Score=51.05  Aligned_cols=46  Identities=13%  Similarity=0.076  Sum_probs=35.5

Q ss_pred             CCCcccccCcccCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHH
Q 007732          439 CTDHYSALGLSRFENVDV--SILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEV  494 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~--eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEV  494 (591)
                      ..|||++||++.  +...  .+|+++||++|++-+++        .+++..|..|+.|
T Consensus       628 ~~~~~~~lG~~~--~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          628 KASTNHILGFPF--TSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             CCSSSEETTEES--SHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCC--ChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            468999999987  3333  56999999999976544        4678888888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	591
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	8e-13
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	3e-12
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	6e-11
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	9e-11
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	1e-10
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-10
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-08
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	1e-06

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 61.6 bits (149), Expect = 8e-13
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKA-----VEAFKKLQNAYEVL 495
           D+++  GL     +D   L   ++      HPDK     +A     V+    +  A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 496 FDSFKRKAYDDELR 509
                R  Y   L 
Sbjct: 62  RHPLMRAEYLLSLH 75

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 60.0 bits (145), Expect = 3e-12
 Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LG+S+    +   +++ Y++ AM  HPD+N G+++A   FK+++ AYEVL DS K
Sbjct: 4   DYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 501 RKAYD 505
           R AYD
Sbjct: 62  RAAYD 66

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.3 bits (138), Expect = 6e-11
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN---EKAVEAFKKLQNAYEVLFD 497
             +  +G++  + V    +K+ YRK  ++VHPDK  G    + A   F +L +A+    +
Sbjct: 34  TKWKPVGMA--DLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 498 SFKRKAY 504
             ++  Y
Sbjct: 92  QGQKPLY 98

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.6 bits (136), Expect = 9e-11
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 13/87 (14%)

Query: 425 SEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEA 484
           S M  E  + +     D YS LG     + ++S LK++Y+K  +L HPDK   +  A   
Sbjct: 6   SGMALEQTLKK-----DWYSILGADP--SANMSDLKQKYQKLILLYHPDKQSADVPAGTM 58

Query: 485 ------FKKLQNAYEVLFDSFKRKAYD 505
                 F ++  A+++L +   +K YD
Sbjct: 59  EECMQKFIEIDQAWKILGNEETKKKYD 85

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
           D+Y  LGL+R        +KR YR++A+  HPDKN     A E FK++  AY+VL D  K
Sbjct: 4   DYYQTLGLAR--GASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60

Query: 501 RKAYD 505
           R+ +D
Sbjct: 61  REIFD 65

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 424 DSEMTSEDEVVRLLNCTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVE 483
           D  ++  D+             L L R    D   +++ Y+++++L+HPDK      +  
Sbjct: 2   DRVLSRADK-------ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG----GSHA 50

Query: 484 AFKKLQNAYEVLFDSFKRKAYD 505
             ++L + +            +
Sbjct: 51  LMQELNSLWGTFKTEVYNLRMN 72

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 50.9 bits (121), Expect = 2e-08
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 15/108 (13%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFK 500
                LGL R    ++ ++++ Y KK    HPDK    EK     KK+   Y+ + D  K
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK----MKKMNTLYKKMEDGVK 64

Query: 501 RKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPF 548
                         D+   + +          +   +  +  + ++ F
Sbjct: 65  YAHQP---------DFGGFWDATEIPTYGTDEWEQWW--NAFNEENLF 101

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAV-EAFKKLQNAYEVLFDSF 499
           +  S +  +    +  S  K+  R+  +  HPDKN  N     E FK LQN    L    
Sbjct: 17  EVTSVVEQAW--KLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74

Query: 500 KRKAYDDELRRE 511
                 D   R 
Sbjct: 75  FLDQNADRASRR 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	591
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.82
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.74
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.7
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.67
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.6
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.53
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.53
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	91.11

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=5.1e-21  Score=157.15  Aligned_cols=68  Identities=41%  Similarity=0.670  Sum_probs=64.5

Q ss_pred             CCCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          439 CTDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       439 ~~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      .+|||+||||++  +||.+|||+|||++++++|||++++++.+++.|++|++||+||+||.+|+.||+++
T Consensus         2 k~dyY~vLgv~~--~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g   69 (75)
T d1xbla_           2 KQDYYEILGVSK--TAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG   69 (75)
T ss_dssp             CCCTTTTTCCSS--SCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHT
T ss_pred             CCCHHHHcCCCC--CcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhC
Confidence            379999999999  89999999999999999999999877889999999999999999999999999854

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.8e-19  Score=148.18  Aligned_cols=66  Identities=42%  Similarity=0.649  Sum_probs=62.4

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      +|||+||||++  +||.++||+||+++++++|||+++ ++.+.+.|+.|++||+||+||.+|+.||+.+
T Consensus         3 kdyY~iLgv~~--~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g   68 (77)
T d1hdja_           3 KDYYQTLGLAR--GASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYG   68 (77)
T ss_dssp             CCSHHHHTCCT--TCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CChHHHcCCCC--CcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhh
Confidence            79999999999  899999999999999999999997 5788999999999999999999999999853

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=3.1e-19  Score=152.43  Aligned_cols=66  Identities=33%  Similarity=0.590  Sum_probs=61.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN------EKAVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~------p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      +|||+||||++  +++.++||+||++|++++||||++.+      +.+++.|+.|++||++|+||++|+.||..
T Consensus        16 ~d~Y~iLgv~~--~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~   87 (94)
T d1wjza_          16 KDWYSILGADP--SANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ   87 (94)
T ss_dssp             SCHHHHTTCCT--TCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred             cChHHHcCCCC--CcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence            79999999999  89999999999999999999998653      45888999999999999999999999984

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.70  E-value=5.8e-19  Score=154.89  Aligned_cols=64  Identities=28%  Similarity=0.378  Sum_probs=57.4

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      .|||+||||++.+..+.++||+|||+||+++||||++.    .++|++|++||+||+||.+|+.||+.
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~   71 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF   71 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhcc
Confidence            68999999999332378999999999999999999974    36899999999999999999999974

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=2e-17  Score=135.23  Aligned_cols=68  Identities=24%  Similarity=0.340  Sum_probs=60.4

Q ss_pred             CcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHHHHHHHhhhhhhHHhhhhHh
Q 007732          441 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE-----KAVEAFKKLQNAYEVLFDSFKRKAYDDEL  508 (591)
Q Consensus       441 DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p-----~A~e~Fk~I~eAYEVLsDp~KR~~YD~~l  508 (591)
                      |||++|||++..+++.++||++||++++++|||++.+.+     .+.+.|+.|++||+||+||.+|+.|+-.+
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l   74 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            799999999866678999999999999999999986532     36788999999999999999999998754

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.60  E-value=2.4e-16  Score=131.08  Aligned_cols=64  Identities=17%  Similarity=0.249  Sum_probs=57.6

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhHHhhhhH
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDE  507 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p~A~e~Fk~I~eAYEVLsDp~KR~~YD~~  507 (591)
                      .+||+||||++....+.++||+|||++++++|||+++.    .++|++|++||++|+|+.+|..||..
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~   74 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLG   74 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccC
Confidence            68999999999434499999999999999999999853    47899999999999999999999973

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=9.2e-16  Score=131.88  Aligned_cols=63  Identities=27%  Similarity=0.479  Sum_probs=57.8

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHHHHHHHhhhhhhHHhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNE---KAVEAFKKLQNAYEVLFDSFKRKAY  504 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~p---~A~e~Fk~I~eAYEVLsDp~KR~~Y  504 (591)
                      .++|++||+..  .++.++||+|||++++++||||+++++   .|++.|+.|++||++|+||.+|+.|
T Consensus        33 ~~~y~~Lgl~~--~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          33 ETKWKPVGMAD--LVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CCSCCCCCGGG--CCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             ccCCeecCCCc--cCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            47899999999  899999999999999999999987542   3788999999999999999999988

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.2e-16  Score=129.84  Aligned_cols=62  Identities=31%  Similarity=0.303  Sum_probs=55.4

Q ss_pred             CCcccccCcccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhHHhhhh
Q 007732          440 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGN-EKAVEAFKKLQNAYEVLFDSFKRKAYDD  506 (591)
Q Consensus       440 ~DyYeILGV~~~~~As~eeIKKAYRKLAlk~HPDKn~~~-p~A~e~Fk~I~eAYEVLsDp~KR~~YD~  506 (591)
                      +++|+||+|++  ++|.+|||+|||+|+++||||+++++ +.|+++|+.|++||++|++   +..||+
T Consensus        16 ~~~y~iL~v~~--~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~   78 (88)
T d1iura_          16 KEVTSVVEQAW--KLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQ   78 (88)
T ss_dssp             HHHHHHHHHTT--SSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSS
T ss_pred             HHHHHHhCCCC--CCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhc
Confidence            58999999999  89999999999999999999999876 4589999999999999975   455554

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=91.11  E-value=0.058  Score=42.75  Aligned_cols=39  Identities=10%  Similarity=0.070  Sum_probs=28.7

Q ss_pred             CCCcccccccccccccccceeeecccccccccccccccceeEEE
Q 007732          545 DDPFGESRRIACKKCNNFHVWIETKKSKASARWCQVFIFAFCTY  588 (591)
Q Consensus       545 e~~~~~sr~I~C~~C~Gtg~~~~T~~~~skar~C~~C~GsF~ay  588 (591)
                      +..+.+.+.+.|+.|+|++     .........|+.|+|+-..+
T Consensus         3 ~k~i~i~~~~~C~~C~G~G-----~~~g~~~~~C~~C~G~G~v~   41 (79)
T d1exka_           3 TKEIRIPTLEECDVCHGSG-----AKPGTQPQTCPTCHGSGQVQ   41 (79)
T ss_dssp             TTSCCCCCEEECGGGTTTS-----BCSSSCCEECTTTTTSSEEE
T ss_pred             eEEEEeeeeccCCCCcCcc-----cCCCccceeCCCccceeEEE
Confidence            3567788889999999976     34455667788888876544