Citrus Sinensis ID: 007734
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | 2.2.26 [Sep-21-2011] | |||||||
| Q39033 | 581 | Phosphoinositide phosphol | yes | no | 0.981 | 0.998 | 0.729 | 0.0 | |
| Q9LY51 | 584 | Phosphoinositide phosphol | no | no | 0.976 | 0.988 | 0.683 | 0.0 | |
| Q8GV43 | 613 | Phosphoinositide phosphol | no | no | 0.972 | 0.938 | 0.594 | 0.0 | |
| Q944C1 | 597 | Phosphoinositide phosphol | no | no | 0.979 | 0.969 | 0.579 | 0.0 | |
| Q944C2 | 578 | Phosphoinositide phosphol | no | no | 0.962 | 0.984 | 0.550 | 0.0 | |
| Q39032 | 561 | Phosphoinositide phosphol | no | no | 0.935 | 0.985 | 0.547 | 0.0 | |
| Q56W08 | 564 | Phosphoinositide phosphol | no | no | 0.932 | 0.976 | 0.533 | 1e-174 | |
| Q9STZ3 | 531 | Phosphoinositide phosphol | no | no | 0.878 | 0.977 | 0.392 | 1e-108 | |
| Q6NMA7 | 531 | Phosphoinositide phosphol | no | no | 0.871 | 0.969 | 0.380 | 6e-99 | |
| Q8N3E9 | 789 | 1-phosphatidylinositol 4, | yes | no | 0.886 | 0.664 | 0.311 | 1e-64 |
| >sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/592 (72%), Positives = 496/592 (83%), Gaps = 12/592 (2%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLKRRIIISTKPPKEY E K+ + Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEV----VQKGKDLGDEEVWGREVPSFIQRNKSEA- 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
KDD DG D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KDDLDGNDDDDDDDDEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRS 419
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQG+GRS
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRS 409
Query: 420 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479
LWLM GMFRANGGCGY+KKP+ LL++G +++FDPK LP K TL+VTVYMGEGWY+DF
Sbjct: 410 LWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTVYMGEGWYFDFR 469
Query: 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539
HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FEFPL+VPELALLR+E
Sbjct: 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLE 529
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
VHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKGE+YKSVKLL+ EF+
Sbjct: 530 VHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEFV 581
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.phosphatidylinositol. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1 |
| >sp|Q9LY51|PLCD7_ARATH Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/598 (68%), Positives = 480/598 (80%), Gaps = 21/598 (3%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRR+ S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP LK+RI+ISTKPPKEY A ++ + ++G+ D+E WG+EVP+ + S D
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATDD----DLVKKGRDLGDKEVWGREVPSFIRRDRSV-D 289
Query: 300 KDDFDGGVDNDEEDSDD------KSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVR 353
K+D +G D+D++D DD K + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVR
Sbjct: 290 KNDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVR 349
Query: 354 RLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNM 413
RLSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNM
Sbjct: 350 RLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNM 409
Query: 414 QGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEG 473
QG GRSLW+M GMFR NGGCGY+KKP+ LL++ N VFDP+ LP K TL+VT+YMGEG
Sbjct: 410 QGLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLPVKTTLRVTIYMGEG 466
Query: 474 WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 533
WYYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKTLEDNWIP+W+E FEFPL+VPEL
Sbjct: 467 WYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPEL 526
Query: 534 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
ALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL ++ G + +SVKLL+ EF+
Sbjct: 527 ALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEFV 584
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/604 (59%), Positives = 447/604 (74%), Gaps = 29/604 (4%)
Query: 6 YRVCFCFRRRFHVAASEAPDAVKSMFDQYS-----------------ENGTMTVDHLHRF 48
YR+ + R+F + D V+ F Q++ G M + L F
Sbjct: 19 YRMFKFYNRKFKINEVTPTDDVRDAFCQFAVGGGGGGTDGDSSDGDGSTGVMGAEQLCSF 78
Query: 49 LIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLF-GDINPPLSPTPV 106
L + + + +AQ +ID +R H+ F R GL+L+ FF +LF D+NPP+ TP
Sbjct: 79 LDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPI--TPH 134
Query: 107 VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNV 166
VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+GVRVIELD+WPNS ++
Sbjct: 135 VHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDI 194
Query: 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226
+VLHG T+T PV L+KCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++
Sbjct: 195 NVLHGRTLTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQM 254
Query: 227 LFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
L+ P S+ L EFPSP SL RIIISTKPPKEYLE++ K+ D+ S DE +E
Sbjct: 255 LYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSSEDETPRTEE 314
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
+ L+S+ DF+ D+D+ED +++ ++ P Y++LI IHAGKPKG +KE +K
Sbjct: 315 IQTLESM----LFDQDFESKSDSDQED--EEASEDQKPAYKRLITIHAGKPKGTVKEEMK 368
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
V DKVRRLSLSEQ+L+ + D+VRFTQRNLLRIYPKG R +SSNY PLIGW+HGA
Sbjct: 369 VVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGA 428
Query: 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 466
QM+AFNMQG+G+SLWLMHGMFRANGGCGYVKKPNFL++ G H+EVFDP+ KLP K+TLKV
Sbjct: 429 QMIAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKV 488
Query: 467 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 526
VYMG+GW DF HTHFDAYSPPDFY ++ I GVPAD KKTK +EDNW P W+EEF F
Sbjct: 489 KVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSF 548
Query: 527 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 586
PL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D+KGE+ KSV+LLM
Sbjct: 549 PLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLM 608
Query: 587 HFEF 590
F F
Sbjct: 609 RFIF 612
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/597 (57%), Positives = 440/597 (73%), Gaps = 18/597 (3%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKEDKASKEDA 63
+Y+ C F R+F + S + V+ +F++Y+E + M+ + L + + E E + S E+A
Sbjct: 9 SYKFCLIFTRKFRMTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEA 68
Query: 64 QAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIY 121
+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI+
Sbjct: 69 ERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIF 126
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 TGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLG 185
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSP
Sbjct: 186 KCLESIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSP 245
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S + D D
Sbjct: 246 EELKEKILISTKPPKEYLEANDTKEKDN-GEKGKDS-DEDVWGKEPEDLIS---TQSDLD 300
Query: 302 DFDGGVDNDEEDSD-------DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
V++ +D + D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RR
Sbjct: 301 KVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRR 360
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 361 LSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ 420
Query: 415 GHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474
G+GR+LWLM GMFRANGGCGYVKKP+FL+ P+ + F PK KKTLKV V MG+GW
Sbjct: 421 GYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGW 480
Query: 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA 534
DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P WN+EF FPL+VPELA
Sbjct: 481 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELA 540
Query: 535 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
LLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVPL +RKG +Y S +LLM FEF+
Sbjct: 541 LLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/590 (55%), Positives = 415/590 (70%), Gaps = 21/590 (3%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDA 63
+Y++ C + + P V + F +Y+E + MT + L RFL+EVQ E + DA
Sbjct: 7 SYKMGLCCSDKLRMNRGAPPQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDA 66
Query: 64 QAIIDSLR-ELKHLNIFQRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIY 121
+ II+ + E H+ F R LNL+ FF +LF D +N P+ VH DM +P+SHYFIY
Sbjct: 67 EKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIY 124
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
T HNSYLTGNQ+NS+CSDVP+I+AL++GVR +ELD+WPNS KD++ VLHG T PVEL+
Sbjct: 125 TSHNSYLTGNQINSECSDVPLIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPVELV 184
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCLRSIKE+AF AS YPV++TLEDHLTPDLQAK AEM+ + ++++ P + LKEFPSP
Sbjct: 185 KCLRSIKEHAFYASAYPVILTLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEFPSP 244
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPK L +++K+ E+D+ GK S+D A ++ S
Sbjct: 245 EDLKYKIVISTKPPKGSL--RKDKDSESDAS-GKASSDVSADDEKTEEETS--------- 292
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
N+E+ D +S + + Y +LI I +G K GLKE L +D VRRLSL EQ+
Sbjct: 293 ----EAKNEEDGFDQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQK 348
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421
+ A YG ++++FTQ+NLLRIYPK RV+SSNY P GW +GAQMVAFNMQG+GR+LW
Sbjct: 349 FKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYGRALW 408
Query: 422 LMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHT 481
+MHGMFR NGGCGYVKKP+F++ EVF+PK KLP KKTLKV VYMG+GW F T
Sbjct: 409 MMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQRT 468
Query: 482 HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541
F+ +S P+FY RVGI GV D VMKKTK + W P WNEEFEF L+VPELALLRIEVH
Sbjct: 469 CFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEVH 528
Query: 542 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGER SV LLM F F+
Sbjct: 529 DYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q39032|PLCD1_ARATH Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/588 (54%), Positives = 399/588 (67%), Gaps = 35/588 (5%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
K++++VCFC R F V +SE P+ +K++F YS++ M+ D + RF+I+VQ E A D
Sbjct: 2 KESFKVCFCCVRNFKVKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---D 58
Query: 63 AQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
+ D LKH +F RG++LE F++YL D N PL T V DM P+SHYF+YT
Sbjct: 59 INYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYT 118
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQLNS+ S PI++AL+ GVRVIELD+WPNS +V HGGT+T+ +L K
Sbjct: 119 GHNSYLTGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGGTLTSREDLQK 178
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +KE AF S YPVV+TLEDHLTP LQ KVA+MV++T G LF E + FPSPE
Sbjct: 179 CLNVVKENAFQVSAYPVVLTLEDHLTPILQKKVAKMVSKTFGGSLFQCTDETTECFPSPE 238
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS-ADEEAWGKEVPNLKSLNNSACDKD 301
SLK +I+ISTKPPKEYL+ +Q KGS DE K++ + +
Sbjct: 239 SLKNKILISTKPPKEYLQ----------TQISKGSTTDESTRAKKISDAEEQVQEE---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
+ + A EYR LI+IHAG KGGLK CL DP++V RLS+SEQ
Sbjct: 285 ----------------DEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQW 328
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421
LE T G D+V+FTQRNLLRI+PK R DSSNY+PL+GW HGAQMVAFNMQ HGR LW
Sbjct: 329 LETLAKTRGPDLVKFTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLW 388
Query: 422 LMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP-KVKLPAKKTLKVTVYMGEGWYYDFPH 480
+M GMF+ANGGCGYVKKP+ LL GP E+FDP LP K TLKV +Y GEGW DFP
Sbjct: 389 MMQGMFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPL 448
Query: 481 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
HFD YSPPDFYA+VGIAGVP DT +T+ +D W P W++EFEFPL VPEL+LL I V
Sbjct: 449 DHFDRYSPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITV 508
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
+YD + ++DF GQTC P+SE++ GIRAV LHDR GE YK V+LLM F
Sbjct: 509 KDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q56W08|PLCD3_ARATH Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 612 bits (1577), Expect = e-174, Method: Compositional matrix adjust.
Identities = 313/587 (53%), Positives = 394/587 (67%), Gaps = 36/587 (6%)
Query: 4 QTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDA 63
++++VCFC R F + P ++K +F+ YS NG M+ D L RF+ EVQ E A +
Sbjct: 3 ESFKVCFCCSRSFKEKTRQPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYV 62
Query: 64 QAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
Q I S+ KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+YT
Sbjct: 63 QDIFHSV---KHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYT 119
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L K
Sbjct: 120 GHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQK 179
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +IK+ AF S+YPV+ITLEDHL P LQA+VA+M+T+T +LF SE K FPSPE
Sbjct: 180 CLTAIKDNAFHVSDYPVIITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPE 239
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDD 302
LK +I+ISTKPPKEYLE+K + + E +W + +
Sbjct: 240 ELKGKILISTKPPKEYLESKTVHTTRTPTVK------ETSWNRVANKIL----------- 282
Query: 303 FDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQL 362
EE D +S EA YR LIAIHA K K+CL DP+K R+S+ EQ L
Sbjct: 283 --------EEYKDMES---EAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWL 331
Query: 363 ENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWL 422
+ V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQGHG+ LW+
Sbjct: 332 DTMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWI 391
Query: 423 MHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTH 482
M GMFR NGGCGYVKKP LL + +FDP + P K TLKV +Y GEGW DF HTH
Sbjct: 392 MQGMFRGNGGCGYVKKPRILLD---EHTLFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTH 448
Query: 483 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVH 541
FD YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F LSVPELALL +V
Sbjct: 449 FDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQ 508
Query: 542 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
+YD ++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct: 509 DYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q9STZ3|PLCD8_ARATH Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 316/584 (54%), Gaps = 65/584 (11%)
Query: 14 RRFHVAASEAPDAVKSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS 69
RR+ + +PD + F Y ++ T+ L L ++ED A A+ I
Sbjct: 5 RRWESHPANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAE 64
Query: 70 L-RELKHLNIFQR-RGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNS 126
L R + F+R R L L+ ++LF +NPP+ VHHDM AP+SHYFI+T NS
Sbjct: 65 LNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNS 122
Query: 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186
Y TGN S +PII AL++GVRV+ELD+WP+ + ++ V P++L +CL S
Sbjct: 123 YFTGNVFGK-YSILPIIEALEQGVRVVELDLWPDGR-GSICVRPSWNFEKPLKLQECLDS 180
Query: 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKR 246
IKE+AF YP++IT +D L P+LQ+K +M+ QT +++ L+ FPSP+ L+
Sbjct: 181 IKEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRN 240
Query: 247 RIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGG 306
+I+IS +PPKE L A + DD G
Sbjct: 241 KILISRRPPKELLYAND-------------------------------------DDGKVG 263
Query: 307 VDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAV 366
V N E QH P Y+ L++ H +P+G L+ L +K++R
Sbjct: 264 VRNGVE----IRQHPADPNYQSLVSFHVVEPRGMLQNVLTGKANKIQR-----------P 308
Query: 367 GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426
G Y DI+ FTQ+ LR P+ + + Y P W HGAQ++A + + LWLM GM
Sbjct: 309 GWYETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGM 368
Query: 427 FRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAY 486
FRANGGCGYVKKP+FLL GP VF P V K LKV +YMG+GW DF
Sbjct: 369 FRANGGCGYVKKPDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDF-KKRIGRL 426
Query: 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 546
S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+LAL+ EV++Y++S
Sbjct: 427 SKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVS 486
Query: 547 EKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 487 TADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q6NMA7|PLCD9_ARATH Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 362 bits (928), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 320/591 (54%), Gaps = 76/591 (12%)
Query: 12 FRRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIID 68
R++F + + P V + F ++Y + L F L++ +K++ + +A ID
Sbjct: 4 LRKKFEMKQANQPGRVPNYFRNKYHGYDDDMPNLLPTFIKLLDTEKDEDGAGLNAAEQID 63
Query: 69 SLRELKHLNIFQRRGLN---LEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGH 124
+ + +I + R L L ++LF ++NPP+S V H DM AP+SHYFI+T
Sbjct: 64 RELKSRKCDILKFRNLTILELPHLNEFLFSTELNPPISDQ-VRHRDMNAPLSHYFIHTSL 122
Query: 125 NSYLTGNQLNSDCSDV-PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKC 183
SY TGN + + PII AL++GVRV+ELD+ P K D + V P+EL +C
Sbjct: 123 KSYFTGNNVFGRLYSIEPIIDALKQGVRVVELDLLPFGK-DGICVRPKWNFEKPLELQEC 181
Query: 184 LRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPSP 241
L +IK++AF + YPV+IT++D L PDLQ+KV +M+ QT G++++ + L+EFPSP
Sbjct: 182 LDAIKQHAFTPTRSYPVIITIKDSLKPDLQSKVTQMIDQTFGDMVYHEDPQQSLEEFPSP 241
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
L+ +I+IS +PP + L AK
Sbjct: 242 AELQNKILISRRPPTKLLYAKA-------------------------------------- 263
Query: 302 DFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+ GV+ + +E S DK+ Y+ ++ HA +P+G L++ L D +
Sbjct: 264 -VENGVELEIQEGSTDKN-------YQSVVGFHAVEPRGMLQKALTDDVQQP-------- 307
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN-YNPLIGWSHGAQMVAFNMQGHGRS 419
G Y D++ FTQ LR PK + S+ Y P W HGAQM+A + Q
Sbjct: 308 ------GWYERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEK 361
Query: 420 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479
LWLM GMFRANGGCGYVKKPNFLL G + VF P KTLKV +YMG+GW DF
Sbjct: 362 LWLMQGMFRANGGCGYVKKPNFLLNAG-SSGVFYPTENPVVVKTLKVKIYMGDGWIVDF- 419
Query: 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539
S PD Y R+ IAGVP D + T + W P+W EEF FPL+ P+LAL+ E
Sbjct: 420 KKRIGRLSKPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFE 479
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
V++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 480 VYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8N3E9|PLCD3_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 OS=Homo sapiens GN=PLCD3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 275/571 (48%), Gaps = 47/571 (8%)
Query: 27 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
++ +F QYS E+ ++ L FL E Q E+ A+ AQ +I + EL Q +
Sbjct: 256 LEEIFHQYSGEDRVLSAPELLEFL-EDQGEEGATLARAQQLIQTY-ELNE-TAKQHELMT 312
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
L+ F YL L T V DM P++HYFI + HN+YLT +Q+ S +R
Sbjct: 313 LDGFMMYLLSPEGAALDNTHTCVFQDMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVR 372
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
A +G R +ELD W + V + HG T+T+ + +++++++AF S YPV+++LE
Sbjct: 373 AFAQGCRCVELDCWEGPGGEPV-IYHGHTLTSKILFRDVVQAVRDHAFTLSPYPVILSLE 431
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAK 262
+H + QA +A + LG++L T S +E PSPE LK R+++ K
Sbjct: 432 NHCGLEQQAAMARHLCTILGDMLVTQALDSPNPEELPSPEQLKGRVLV-----------K 480
Query: 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322
+K S+ G+ +D E ++ + +A + +
Sbjct: 481 GKKLPAARSEDGRALSDREEEEEDDEEEEEEVEAAAQR----------------RLAKQI 524
Query: 323 APEYRKL-IAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNL 381
+PE L + HA + + P +V SLSE++ + + GN VR R L
Sbjct: 525 SPELSALAVYCHATRLRTLHPAPNAPQPCQVS--SLSERKAKKLIREAGNSFVRHNARQL 582
Query: 382 LRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNF 441
R+YP G+R++S+NY+P W+ G Q+VA N Q G + L G F NG CGYV KP
Sbjct: 583 TRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVNGQCGYVLKPAC 642
Query: 442 LLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGV 500
L Q + FDP+ P + TL + V + P + + +S D R+ I GV
Sbjct: 643 LRQP---DSTFDPEYPGPPRTTLSIQVLTAQ----QLPKLNAEKPHSIVDPLVRIEIHGV 695
Query: 501 PADTVMKKTK-TLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 559
PAD ++T L + + P W + +F L PELAL+R V +YD + +DF GQ LP+
Sbjct: 696 PADCARQETDYVLNNGFNPRWGQTLQFQLRAPELALVRFVVEDYDATSPNDFVGQFTLPL 755
Query: 560 SELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
S LKQG R + L + G L +
Sbjct: 756 SSLKQGYRHIHLLSKDGASLSPATLFIQIRI 786
|
Hydrolyzes the phosphatidylinositol 4,5-bisphosphate (PIP2) to generate 2 second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). DAG mediates the activation of protein kinase C (PKC), while IP3 releases Ca(2+) from intracellular stores. Essential for trophoblast and placental development. May participate in cytokinesis by hydrolyzing PIP2 at the cleavage furrow. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | ||||||
| 225448433 | 593 | PREDICTED: phosphoinositide phospholipas | 0.998 | 0.994 | 0.794 | 0.0 | |
| 255585958 | 594 | 1-phosphatidylinositol-4,5-bisphosphate | 0.998 | 0.993 | 0.788 | 0.0 | |
| 225448435 | 592 | PREDICTED: phosphoinositide phospholipas | 0.996 | 0.994 | 0.799 | 0.0 | |
| 359486403 | 580 | PREDICTED: phosphoinositide phospholipas | 0.981 | 1.0 | 0.790 | 0.0 | |
| 224098612 | 590 | predicted protein [Populus trichocarpa] | 0.994 | 0.996 | 0.772 | 0.0 | |
| 224112503 | 587 | predicted protein [Populus trichocarpa] | 0.993 | 1.0 | 0.766 | 0.0 | |
| 351725699 | 600 | phosphoinositide-specific phospholipase | 0.988 | 0.973 | 0.750 | 0.0 | |
| 351720874 | 600 | phosphatidylinositol-specific phospholip | 0.984 | 0.97 | 0.751 | 0.0 | |
| 116563473 | 588 | phospholipase C [Nicotiana tabacum] | 0.994 | 1.0 | 0.744 | 0.0 | |
| 2853039 | 585 | phosphoinositide-specific phospholipase | 0.989 | 1.0 | 0.741 | 0.0 |
| >gi|225448433|ref|XP_002269949.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 1 [Vitis vinifera] gi|147828132|emb|CAN64084.1| hypothetical protein VITISV_006935 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/594 (79%), Positives = 525/594 (88%), Gaps = 4/594 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 299
Query: 301 D---DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 300 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 359
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHG 417
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQG+G
Sbjct: 360 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYG 419
Query: 418 RSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 477
RSLW+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K TLKVTVYMGEGWY+D
Sbjct: 420 RSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFD 479
Query: 478 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 537
F HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR
Sbjct: 480 FRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLR 539
Query: 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 540 VEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585958|ref|XP_002533650.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] gi|223526463|gb|EEF28738.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/595 (78%), Positives = 530/595 (89%), Gaps = 5/595 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKAS 59
MSKQTYRVCFCFRRRF +A +EAP +KS+FDQYS+N G M++D L RFL+E+QK+D A+
Sbjct: 1 MSKQTYRVCFCFRRRFRLAVAEAPQEIKSLFDQYSDNNGLMSIDQLRRFLVEIQKQDNAT 60
Query: 60 KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
EDAQAI ++L ELKHLNIF R+GLNLEAFFKYLFGDINPPL VHHDMT P+SHYF
Sbjct: 61 TEDAQAIFNNLHELKHLNIFHRKGLNLEAFFKYLFGDINPPLDVKRGVHHDMTCPLSHYF 120
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII+ALQ+GVRVIELDIWPNS KDNV+VLHG T+T PVE
Sbjct: 121 IYTGHNSYLTGNQLSSDCSDVPIIQALQRGVRVIELDIWPNSTKDNVEVLHGRTLTTPVE 180
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LIKCLRSIKE+AF AS+YPVVITLEDHLTPDLQAKVAEM+TQT G+ILFTPGSECLKEFP
Sbjct: 181 LIKCLRSIKEHAFRASDYPVVITLEDHLTPDLQAKVAEMITQTFGDILFTPGSECLKEFP 240
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SPESLK+RII+STKPPKEYLE +E +E+E DSQ GK +DEE WGKE+P+LK + D
Sbjct: 241 SPESLKKRIIVSTKPPKEYLEVREIREREGDSQSGKPGSDEETWGKEIPDLKG-HFRVDD 299
Query: 300 KDDFDGGVDNDEE---DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
K++ D ++DE+ D D+KSQ N APEY+ LIAIHAGKPKGG++ECLKVDPDKVRRLS
Sbjct: 300 KNELDEDNNDDEDAAPDGDNKSQQNIAPEYKHLIAIHAGKPKGGIEECLKVDPDKVRRLS 359
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGH 416
LSEQQLE A T+G +IVRFTQRN+LR+YPKGIRVDSSNYNPLIGW HGAQMVAFNMQGH
Sbjct: 360 LSEQQLEKAAETHGKEIVRFTQRNILRVYPKGIRVDSSNYNPLIGWMHGAQMVAFNMQGH 419
Query: 417 GRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 476
GRSLWLM GMFRANGGCGYVKKP+FLL++GPH EVFDP+ KLP K TLKV VYMGEGWYY
Sbjct: 420 GRSLWLMQGMFRANGGCGYVKKPDFLLKSGPHGEVFDPRAKLPVKTTLKVKVYMGEGWYY 479
Query: 477 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 536
DF THFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNWIP WNEEFEFPL+VPELALL
Sbjct: 480 DFDRTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWIPVWNEEFEFPLTVPELALL 539
Query: 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
R+EVHEYDMSEKDDFGGQ+CLPVSEL++GIRA+PLHDRKG +Y SVKLL+ F+F+
Sbjct: 540 RVEVHEYDMSEKDDFGGQSCLPVSELRKGIRAIPLHDRKGVKYNSVKLLVRFDFV 594
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448435|ref|XP_002270230.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/594 (79%), Positives = 526/594 (88%), Gaps = 5/594 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS V HHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSLFQV-HHDMTAPLSHYFV 119
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 120 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 179
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 180 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 240 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 298
Query: 301 DDFDGGVDNDEED---SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + DEED D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 299 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 358
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHG 417
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQG+G
Sbjct: 359 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYG 418
Query: 418 RSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 477
RSLW+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K TLKVTVYMGEGWY+D
Sbjct: 419 RSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFD 478
Query: 478 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 537
F HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR
Sbjct: 479 FRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLR 538
Query: 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 539 VEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 592
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486403|ref|XP_003633437.1| PREDICTED: phosphoinositide phospholipase C 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/591 (79%), Positives = 516/591 (87%), Gaps = 11/591 (1%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKE + N
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKESNLEEEENIDE--- 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSLSEQ
Sbjct: 298 --------EDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSLSEQ 349
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420
+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQG+GRSL
Sbjct: 350 ELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQGYGRSL 409
Query: 421 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 480
W+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K TLKVTVYMGEGWY+DF H
Sbjct: 410 WIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKVTVYMGEGWYFDFRH 469
Query: 481 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
THFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEFPL+VPELALLR+EV
Sbjct: 470 THFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEFPLTVPELALLRVEV 529
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
HEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM FEF+
Sbjct: 530 HEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLMRFEFV 580
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098612|ref|XP_002311223.1| predicted protein [Populus trichocarpa] gi|222851043|gb|EEE88590.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/593 (77%), Positives = 521/593 (87%), Gaps = 5/593 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF +A +E PD +K++FD YSENG MT DH+HRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCFCFRRRFKLAVAEVPDEIKALFDLYSENGIMTADHIHRFLIEVQKQEKATF 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ+I++SL KHL++F R+GL+LEAFFKYLFGD NPPL VHHDMTAP+SHYFI
Sbjct: 61 EEAQSIVESL---KHLSLFHRKGLHLEAFFKYLFGDTNPPLDLKLGVHHDMTAPLSHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+S+CSDVPII AL+KGVRVIELDIWPNS D+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSECSDVPIINALKKGVRVIELDIWPNSDNDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSI E+AF ASE+PVVITLEDHLTPDLQAKVA+MVTQT G+ILFTPGSE LKEFPS
Sbjct: 178 IKCLRSINEHAFTASEFPVVITLEDHLTPDLQAKVAQMVTQTFGDILFTPGSERLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS--LNNSAC 298
P+SLKRRIIISTKPPKEYLEAKE K+KE+ Q+G ++DEEAWGKE+P L L +
Sbjct: 238 PDSLKRRIIISTKPPKEYLEAKEIKDKESHYQKGNAASDEEAWGKEIPILNGHILADDKN 297
Query: 299 DKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLS 358
+ D D + D ++ D K QH+ APEY++LIAIHAGKPKGGL ECLKVDPDKVRRLSLS
Sbjct: 298 ESDKDDDDAEEDLDEGDHKLQHDIAPEYKRLIAIHAGKPKGGLDECLKVDPDKVRRLSLS 357
Query: 359 EQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGR 418
EQQLE A T+G +IVRFTQRN+LR+YPKG RV+SSNYNPLIGW HGAQMVAFNMQG+GR
Sbjct: 358 EQQLEKAAETHGKEIVRFTQRNILRVYPKGTRVNSSNYNPLIGWMHGAQMVAFNMQGYGR 417
Query: 419 SLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDF 478
SLWLM GMFRANGGCG+VKKP+FLL++GPH EVFD K KLP +KTLKV +YMGEGW+YDF
Sbjct: 418 SLWLMQGMFRANGGCGFVKKPSFLLKSGPHGEVFDTKAKLPMQKTLKVKIYMGEGWFYDF 477
Query: 479 PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 538
HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED+WIP WNEEFEFPL+VPELALLRI
Sbjct: 478 QHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDSWIPFWNEEFEFPLTVPELALLRI 537
Query: 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
EVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGERYK VKLL+ EF+
Sbjct: 538 EVHEYDMSEKDDFGGQTCLPVWELREGIRAVPLHDRKGERYKCVKLLVRLEFV 590
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112503|ref|XP_002316212.1| predicted protein [Populus trichocarpa] gi|222865252|gb|EEF02383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/591 (76%), Positives = 520/591 (87%), Gaps = 4/591 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVC CF RRF +A +EAP+ ++++F+QYS+NG MT +HLHRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCLCFSRRFKLAVAEAPEEIRALFNQYSDNGIMTDNHLHRFLIEVQKQEKATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQAII+SL KHL IF R+GLNLEAFFKYLFGD NPPL HHDMTAP+SHYFI
Sbjct: 61 EEAQAIIESL---KHLAIFHRKGLNLEAFFKYLFGDNNPPLDLKLGAHHDMTAPISHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPNS KD+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNSDKDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF ASE+PVVITLEDHLTPDLQ+KV++MVTQT G+ LF+PGSECLKEFPS
Sbjct: 178 IKCLRSIKEHAFTASEFPVVITLEDHLTPDLQSKVSKMVTQTFGDTLFSPGSECLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRRIIISTKPPKEYLEAKE K+KE+DSQ+G + DEEAWGKE+ NLK ++
Sbjct: 238 PESLKRRIIISTKPPKEYLEAKEIKDKESDSQKGNAAPDEEAWGKEILNLKGADDKNELD 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+D + ++ E D K H+ APEY++LIAI AGKPKGGL+ECLKVDPDK RRLSLSEQ
Sbjct: 298 EDDNDAEEDPGE-GDHKLPHDIAPEYKRLIAIPAGKPKGGLEECLKVDPDKARRLSLSEQ 356
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420
QLENA T+G +IVRFTQRN+LR+YPKGIRV+SSNYNPLIGW HGAQMVAFNMQG+GRSL
Sbjct: 357 QLENAAETHGKEIVRFTQRNILRVYPKGIRVNSSNYNPLIGWMHGAQMVAFNMQGYGRSL 416
Query: 421 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 480
W+M GMFRANGGCG+VKKP+FLL++GPH EVFDPK KLP +KTLKV +YMGEGWYYDF H
Sbjct: 417 WMMQGMFRANGGCGFVKKPDFLLKSGPHGEVFDPKAKLPVQKTLKVKIYMGEGWYYDFHH 476
Query: 481 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
THFDAYSPPDFY RVGIAGVPADT MKKT+TLEDNWIP W+E FEFPL+VP+LALLRIEV
Sbjct: 477 THFDAYSPPDFYVRVGIAGVPADTGMKKTRTLEDNWIPVWDEGFEFPLTVPDLALLRIEV 536
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
HEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGE+Y SVKLL+ EF+
Sbjct: 537 HEYDMSEKDDFGGQTCLPVRELREGIRAVPLHDRKGEKYNSVKLLVRLEFV 587
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351725699|ref|NP_001235310.1| phosphoinositide-specific phospholipase C P13 [Glycine max] gi|1399305|gb|AAB03258.1| phosphoinositide-specific phospholipase C P13 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/602 (75%), Positives = 513/602 (85%), Gaps = 18/602 (2%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL++VQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFNEYSENELMTPSHLKRFLVDVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FHRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPN+ KD++DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNASKDSIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DS+ GK S ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSEHGKASGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVDNDEE-DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDP 349
K ++ D ++++EE D DKS HNEAPEYR LIAIHAGKPKGGL ECLKVDP
Sbjct: 297 KGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEYRHLIAIHAGKPKGGLVECLKVDP 356
Query: 350 DKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
+KVRRLSLSEQQLE A YG IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQMV
Sbjct: 357 EKVRRLSLSEQQLEKAAINYGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMV 416
Query: 410 AFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVY 469
AFNMQG+GRSLWLMHGMFRANGGCGYVKKPNFLL+TGP +EVF+PK KLP K TLKVTVY
Sbjct: 417 AFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVTVY 476
Query: 470 MGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS 529
MGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +EDNW+P+WNE FEFPL+
Sbjct: 477 MGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEAFEFPLT 536
Query: 530 VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFE 589
VPELALLRIEVHEYDMSEKDDFGGQTCLP+ EL+ GIRA+PLH +KG++Y +VKLLM FE
Sbjct: 537 VPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFE 596
Query: 590 FI 591
FI
Sbjct: 597 FI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720874|ref|NP_001236167.1| phosphatidylinositol-specific phospholipase C [Glycine max] gi|945039|gb|AAA74441.1| phosphatidylinositol-specific phospholipase C [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/604 (75%), Positives = 513/604 (84%), Gaps = 22/604 (3%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL+EVQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEFMTPSHLKRFLVEVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FPRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL++GVRVIELDIWPN+ KDN+DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVT+T G++LFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDLLFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DSQ GK ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHGKALGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVD-NDEE--DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347
K + D D++ D NDEE D DKS HNEAPEYR+LIAIHAGKPKGGL ECLKV
Sbjct: 297 KG--GTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPEYRRLIAIHAGKPKGGLAECLKV 354
Query: 348 DPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQ 407
DPDKVRRLSLSEQQLE A +G IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQ
Sbjct: 355 DPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQ 414
Query: 408 MVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVT 467
MVAFNMQG+GRSLWLMHGMFRANGGCGYVKKPNFLL+TGP +EVF+PK KLP K TLKVT
Sbjct: 415 MVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVT 474
Query: 468 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 527
VYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +EDNW+P+WNE FEFP
Sbjct: 475 VYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEVFEFP 534
Query: 528 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 587
L+VPELALLRIEVHEYDMSEKDDFGGQ CLP+ EL+ GIRA+PLH +KG++Y +VKLLM
Sbjct: 535 LTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSGIRAIPLHSQKGDKYNTVKLLMR 594
Query: 588 FEFI 591
FEFI
Sbjct: 595 FEFI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116563473|gb|ABJ99758.1| phospholipase C [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/591 (74%), Positives = 514/591 (86%), Gaps = 3/591 (0%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MS+QTYRVCFCFRRRF V A+EAP VK++F++YS+NG M ++L RFLIEVQKE+ +S
Sbjct: 1 MSRQTYRVCFCFRRRFRVVAAEAPADVKNLFNKYSDNGVMNAENLQRFLIEVQKEENSSI 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ I+++L +LK LNIF RRGL+L+AFFKYLF DINPP++P +HHDM P+SHYFI
Sbjct: 61 EDAQGIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPINPKRGIHHDMNEPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF SEYPVVITLEDHLTPDLQAKVAEM+TQT G++LF+P S CLK FPS
Sbjct: 181 IKCLRSIKEHAFSVSEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPDS-CLKNFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE KEK DS++G S D EAWG+EV +LK+ N D
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKEVKEK--DSKKGTESPDTEAWGREVSDLKARYNDKDDS 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD G D++ ++ D SQ N APEY+ LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 298 DDGAGVEDDESDEGDPNSQQNVAPEYKCLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 357
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420
+L AV T+G +I+RFTQRNLLRIYPKGIR DSSNYNP + W+HGAQMVAFNMQG+GRSL
Sbjct: 358 ELGKAVVTHGKEIIRFTQRNLLRIYPKGIRFDSSNYNPFVAWTHGAQMVAFNMQGYGRSL 417
Query: 421 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 480
WLMHGMFR+NGGCGYVKKP+ LL+ GP+N++FDP+ LP K TLKVTV+MGEGWYYDF H
Sbjct: 418 WLMHGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEANLPVKTTLKVTVFMGEGWYYDFNH 477
Query: 481 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
THFDAYSPPDFYA++GIAGVPAD VMKKT+TLEDNWIP+W+E+FEFPL+VPELALLR+EV
Sbjct: 478 THFDAYSPPDFYAKIGIAGVPADNVMKKTRTLEDNWIPTWDEKFEFPLTVPELALLRVEV 537
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
HEYDMSEKDDF GQTCLPVSEL+QGIRAV LHDRKGE+Y SVKLLM FE++
Sbjct: 538 HEYDMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGEKYNSVKLLMRFEYV 588
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2853039|emb|CAA63954.1| phosphoinositide-specific phospholipase C [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/591 (74%), Positives = 508/591 (85%), Gaps = 6/591 (1%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQ+YRVCFCFRRRF V A+EAP VK++F++YS+NG M+ ++LHRFLIEVQKE+ A+
Sbjct: 1 MSKQSYRVCFCFRRRFRVLAAEAPADVKNLFNRYSDNGVMSAENLHRFLIEVQKEENATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDA AI+++L +LK LNIF RRGL+L+AFFKYLF DINPPL+ +H DM AP+SHYFI
Sbjct: 61 EDAHAIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPLNSKLGIHQDMNAPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF SEYPVVITLEDHLT DLQAK AEM+TQT G++LF+ S CLKEFPS
Sbjct: 181 IKCLKSIKEHAFTVSEYPVVITLEDHLTTDLQAKTAEMITQTFGDMLFSSDS-CLKEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE E + +G D EAWG+EV ++K+ N DK
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKEVNE--TGAMKGTDQTDTEAWGREVSDIKARYN---DK 294
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD D G +D ++ D SQ N APEYR+LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 295 DDSDEGEADDSDEEDPTSQQNTAPEYRRLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 354
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420
+L AV T+G +I+RFTQRN+LRIYPKGIR DSSNYNP W+HGAQMVAFNMQG+GRSL
Sbjct: 355 ELGKAVVTHGKEIIRFTQRNILRIYPKGIRFDSSNYNPFNAWTHGAQMVAFNMQGYGRSL 414
Query: 421 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 480
WLMHGMFR NGGCGYVKKP+ LL+ GP+NEVFDP+ LP K TLKVTV+MGEGWYYDF H
Sbjct: 415 WLMHGMFRGNGGCGYVKKPDILLKAGPNNEVFDPEANLPVKTTLKVTVFMGEGWYYDFEH 474
Query: 481 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
THFDAYSPPDFYAR+GIAGV AD VMKKTKTLEDNWIP+W+E+FEFPL+VPELALLR+EV
Sbjct: 475 THFDAYSPPDFYARIGIAGVDADIVMKKTKTLEDNWIPTWDEQFEFPLTVPELALLRVEV 534
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
HEYDMSEKDDF GQTCLPVSEL+QGIRAVPLH+RKGE+Y SVKLL+ FEFI
Sbjct: 535 HEYDMSEKDDFAGQTCLPVSELRQGIRAVPLHNRKGEKYNSVKLLLRFEFI 585
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | ||||||
| TAIR|locus:2103437 | 581 | PLC2 "phospholipase C 2" [Arab | 0.981 | 0.998 | 0.689 | 1.8e-220 | |
| TAIR|locus:2082018 | 584 | AT3G55940 [Arabidopsis thalian | 0.978 | 0.989 | 0.651 | 1.3e-205 | |
| TAIR|locus:504956034 | 613 | AT2G40116 [Arabidopsis thalian | 0.928 | 0.895 | 0.602 | 3.8e-181 | |
| TAIR|locus:2178848 | 597 | PLC4 "phosphatidylinositol-spe | 0.947 | 0.938 | 0.568 | 1.2e-170 | |
| TAIR|locus:2178803 | 561 | PLC1 "phospholipase C1" [Arabi | 0.461 | 0.486 | 0.638 | 7.6e-161 | |
| TAIR|locus:2121239 | 564 | PLC1 "phospholipase C1" [Arabi | 0.455 | 0.476 | 0.615 | 4.4e-154 | |
| TAIR|locus:2178833 | 578 | PLC5 "phosphatidylinositol-spe | 0.932 | 0.953 | 0.535 | 2.5e-152 | |
| TAIR|locus:2099530 | 531 | PLC8 "phosphatidylinositol-spe | 0.438 | 0.487 | 0.455 | 1.4e-99 | |
| TAIR|locus:2075696 | 531 | PLC9 "AT3G47220" [Arabidopsis | 0.421 | 0.468 | 0.469 | 1.1e-93 | |
| UNIPROTKB|E1BJE0 | 815 | PLCD3 "Uncharacterized protein | 0.395 | 0.287 | 0.386 | 1.3e-63 |
| TAIR|locus:2103437 PLC2 "phospholipase C 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2129 (754.5 bits), Expect = 1.8e-220, P = 1.8e-220
Identities = 408/592 (68%), Positives = 467/592 (78%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNLKSLNNSACX 299
SP SLKRRIIIST Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEVV----QKGKDLGDEEVWGREVPSFIQRNKSEAK 290
Query: 300 XXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
+DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 291 DDLDGNDDDDDDD-DEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRS 419
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQG+GRS
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRS 409
Query: 420 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479
LWLM GMFRANGGCGY+KKP+ LL++G +++FDPK LP K TL+VTVYMGEGWY+DF
Sbjct: 410 LWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTVYMGEGWYFDFR 469
Query: 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539
HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FEFPL+VPELALLR+E
Sbjct: 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLE 529
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
VHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKGE+YKSVKLL+ EF+
Sbjct: 530 VHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEFV 581
|
|
| TAIR|locus:2082018 AT3G55940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1989 (705.2 bits), Expect = 1.3e-205, P = 1.3e-205
Identities = 389/597 (65%), Positives = 454/597 (76%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNL----KSLN- 294
SP LK+RI+IST ++G+ D+E WG+EVP+ +S++
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATDDDLV----KKGRDLGDKEVWGREVPSFIRRDRSVDK 290
Query: 295 NSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
N + DDK + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVRR
Sbjct: 291 NDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVRR 350
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNMQ
Sbjct: 351 LSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNMQ 410
Query: 415 GHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474
G GRSLW+M GMFR NGGCGY+KKP+ LL++ N VFDP+ LP K TL+VT+YMGEGW
Sbjct: 411 GLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLPVKTTLRVTIYMGEGW 467
Query: 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA 534
YYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKTLEDNWIP+W+E FEFPL+VPELA
Sbjct: 468 YYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEFPLTVPELA 527
Query: 535 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
LLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL ++ G + +SVKLL+ EF+
Sbjct: 528 LLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEFV 584
|
|
| TAIR|locus:504956034 AT2G40116 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1758 (623.9 bits), Expect = 3.8e-181, P = 3.8e-181
Identities = 338/561 (60%), Positives = 413/561 (73%)
Query: 32 DQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGLNLEAFF 90
D G M + L FL + + + +AQ +ID +R H+ F R GL+L+ FF
Sbjct: 62 DGDGSTGVMGAEQLCSFLDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFF 119
Query: 91 KYLF-GDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKG 149
+LF D+NPP+ TP VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+G
Sbjct: 120 NFLFYDDLNPPI--TPHVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRG 177
Query: 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209
VRVIELD+WPNS +++VLHG T+T PV L+KCL+SI++YAF +S YPV+ITLEDHLTP
Sbjct: 178 VRVIELDLWPNSTGTDINVLHGRTLTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTP 237
Query: 210 DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXN 269
DLQAKVAEM TQ G++L+ P S+ L EFPSP SL RIIIST
Sbjct: 238 DLQAKVAEMATQIFGQMLYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQK 297
Query: 270 DSQRGKGSADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKL 329
D+ S DE +E+ L+S+ D+++ ++ P Y++L
Sbjct: 298 DNNVSPSSEDETPRTEEIQTLESM------LFDQDFESKSDSDQEDEEASEDQKPAYKRL 351
Query: 330 IAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGI 389
I IHAGKPKG +KE +KV DKVRRLSLSEQ+L+ + D+VRFTQRNLLRIYPKG
Sbjct: 352 ITIHAGKPKGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGT 411
Query: 390 RVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHN 449
R +SSNY PLIGW+HGAQM+AFNMQG+G+SLWLMHGMFRANGGCGYVKKPNFL++ G H+
Sbjct: 412 RFNSSNYKPLIGWTHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHD 471
Query: 450 EVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT 509
EVFDP+ KLP K+TLKV VYMG+GW DF HTHFDAYSPPDFY ++ I GVPAD KKT
Sbjct: 472 EVFDPRKKLPVKETLKVKVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKT 531
Query: 510 KTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV 569
K +EDNW P W+EEF FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+V
Sbjct: 532 KIIEDNWYPIWDEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSV 591
Query: 570 PLHDRKGERYKSVKLLMHFEF 590
PL+D+KGE+ KSV+LLM F F
Sbjct: 592 PLYDKKGEKMKSVRLLMRFIF 612
|
|
| TAIR|locus:2178848 PLC4 "phosphatidylinositol-speciwc phospholipase C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1659 (589.1 bits), Expect = 1.2e-170, P = 1.2e-170
Identities = 325/572 (56%), Positives = 407/572 (71%)
Query: 27 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGL 84
V+ +F++Y+E M+ + L + + E E + S E+A+ I+D LR H+ F RR L
Sbjct: 31 VRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNL 90
Query: 85 NLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPII 143
L+ F YLF D+NPP++ VH +M AP+SHYFI+TGHNSYLTGNQL+S+CS++PI
Sbjct: 91 TLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIA 148
Query: 144 RALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL 203
AL++GVRV+ELD+WP D+V V HG T+T V+L KCL SIK AF S+YPV+ITL
Sbjct: 149 DALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLGKCLESIKANAFAISKYPVIITL 207
Query: 204 EDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXX 263
EDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSPE LK +I+IST
Sbjct: 208 EDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSPEELKEKILISTKPPKEYLEAND 267
Query: 264 XXXXXNDSQRGKGSADEEAWGKEVPNLKS----LNNSACXXXXXXXXXXXXXXXSDDKSQ 319
N ++GK S DE+ WGKE +L S L+ D S
Sbjct: 268 TKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESDTSC 325
Query: 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQR 379
+APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+
Sbjct: 326 QLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQK 385
Query: 380 NLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKP 439
N LRIYPKG R +SSNY P IGW GAQM+AFNMQG+GR+LWLM GMFRANGGCGYVKKP
Sbjct: 386 NFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKP 445
Query: 440 NFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAG 499
+FL+ P+ + F PK KKTLKV V MG+GW DF THFD+YSPPDF+ RVGIAG
Sbjct: 446 DFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAG 505
Query: 500 VPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 559
P D VM+KTK D W P WN+EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPV
Sbjct: 506 APVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELALLRVEVHEHDVNEKDDFGGQTCLPV 565
Query: 560 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
SE++QGIRAVPL +RKG +Y S +LLM FEF+
Sbjct: 566 SEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597
|
|
| TAIR|locus:2178803 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 7.6e-161, Sum P(2) = 7.6e-161
Identities = 175/274 (63%), Positives = 208/274 (75%)
Query: 316 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 375
++ + + A EYR LI+IHAG KGGLK CL DP++V RLS+SEQ LE T G D+V+
Sbjct: 283 EEDEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVK 342
Query: 376 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGY 435
FTQRNLLRI+PK R DSSNY+PL+GW HGAQMVAFNMQ HGR LW+M GMF+ANGGCGY
Sbjct: 343 FTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLWMMQGMFKANGGCGY 402
Query: 436 VKKPNFLLQTGPHNEVFDP-KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYAR 494
VKKP+ LL GP E+FDP LP K TLKV +Y GEGW DFP HFD YSPPDFYA+
Sbjct: 403 VKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPLDHFDRYSPPDFYAK 462
Query: 495 VGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 554
VGIAGVP DT +T+ +D W P W++EFEFPL VPEL+LL I V +YD + ++DF GQ
Sbjct: 463 VGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITVKDYDSNTQNDFAGQ 522
Query: 555 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
TC P+SE++ GIRAV LHDR GE YK V+LLM F
Sbjct: 523 TCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
|
|
| TAIR|locus:2121239 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 895 (320.1 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 168/273 (61%), Positives = 200/273 (73%)
Query: 317 KSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 376
K +EA YR LIAIHA K K+CL DP+K R+S+ EQ L+ V T G D+VRF
Sbjct: 286 KDMESEAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWLDTMVRTRGTDLVRF 345
Query: 377 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYV 436
TQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQGHG+ LW+M GMFR NGGCGYV
Sbjct: 346 TQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRGNGGCGYV 405
Query: 437 KKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG 496
KKP LL H +FDP + P K TLKV +Y GEGW DF HTHFD YSPPDF+ ++G
Sbjct: 406 KKPRILLDE--HT-LFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQYSPPDFFVKIG 462
Query: 497 IAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 555
IAGVP DTV +T+T D W P W N+EF F LSVPELALL +V +YD ++DF GQT
Sbjct: 463 IAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYDNDTQNDFAGQT 522
Query: 556 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
CLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct: 523 CLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555
|
|
| TAIR|locus:2178833 PLC5 "phosphatidylinositol-speciwc phospholipase C5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 305/570 (53%), Positives = 384/570 (67%)
Query: 24 PDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82
P V + F +Y+E + MT + L RFL+EVQ E + DA+ II+ + +H +I +
Sbjct: 26 PQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDAEKIIERITCERH-HITKFL 84
Query: 83 GLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVP 141
L + F + P VH DM +P+SHYFIYT HNSYLTGNQ+NS+CSDVP
Sbjct: 85 RHTLNLDDFFSFLFSDDLNHPIDSKVHQDMASPLSHYFIYTSHNSYLTGNQINSECSDVP 144
Query: 142 IIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVI 201
+I+AL++GVR +ELD+WPNS KD++ VLHG T PVEL+KCLRSIKE+AF AS YPV++
Sbjct: 145 LIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPVELVKCLRSIKEHAFYASAYPVIL 204
Query: 202 TLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXX 261
TLEDHLTPDLQAK AEM+ + ++++ P + LKEFPSPE LK +I+IST
Sbjct: 205 TLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEFPSPEDLKYKIVISTKPPKGSLRK 264
Query: 262 XXXXXXXNDSQRGKGSADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHN 321
+D+ GK S+D A ++ S D +S +
Sbjct: 265 DKDSE--SDAS-GKASSDVSADDEKTEEETS-------------EAKNEEDGFDQESSNL 308
Query: 322 EAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNL 381
+ Y +LI I +G K GLKE L +D VRRLSL EQ+ + A YG ++++FTQ+NL
Sbjct: 309 DFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEVIKFTQKNL 368
Query: 382 LRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNF 441
LRIYPK RV+SSNY P GW +GAQMVAFNMQG+GR+LW+MHGMFR NGGCGYVKKP+F
Sbjct: 369 LRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQGYGRALWMMHGMFRGNGGCGYVKKPDF 428
Query: 442 LLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP 501
++ EVF+PK KLP KKTLKV VYMG+GW F T F+ +S P+FY RVGI GV
Sbjct: 429 MMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSPNFYTRVGITGVR 488
Query: 502 ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 561
D VMKKTK + W P WNEEFEF L+VPELALLRIEVH+Y+M EKDDF GQTCLPVSE
Sbjct: 489 GDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEVHDYNMPEKDDFSGQTCLPVSE 548
Query: 562 LKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
L+QGIR+VPL+DRKGER SV LLM F F+
Sbjct: 549 LRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
|
|
| TAIR|locus:2099530 PLC8 "phosphatidylinositol-speciwc phospholipase C8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 612 (220.5 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 124/272 (45%), Positives = 162/272 (59%)
Query: 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 378
QH P Y+ L++ H +P+G L+ L +K++R G Y DI+ FTQ
Sbjct: 272 QHPADPNYQSLVSFHVVEPRGMLQNVLTGKANKIQR-----------PGWYETDIISFTQ 320
Query: 379 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKK 438
+ LR P+ + + Y P W HGAQ++A + + LWLM GMFRANGGCGYVKK
Sbjct: 321 KRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGGCGYVKK 380
Query: 439 PNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 498
P+FLL GP VF P V K LKV +YMG+GW DF S PD Y R+ IA
Sbjct: 381 PDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIA 438
Query: 499 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP 558
GVP D + KT + W P+W EEF FPL+ P+LAL+ EV++Y++S D F GQTCLP
Sbjct: 439 GVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLP 498
Query: 559 VSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
VSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 499 VSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| TAIR|locus:2075696 PLC9 "AT3G47220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 584 (210.6 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 125/266 (46%), Positives = 157/266 (59%)
Query: 326 YRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIY 385
Y+ ++ HA +P+G L++ L D V QQ G Y D++ FTQ LR
Sbjct: 281 YQSVVGFHAVEPRGMLQKALT---DDV-------QQ----PGWYERDVISFTQNKFLRTR 326
Query: 386 PKGIRVDSSN-YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 444
PK + S+ Y P W HGAQM+A + Q LWLM GMFRANGGCGYVKKPNFLL
Sbjct: 327 PKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEKLWLMQGMFRANGGCGYVKKPNFLLN 386
Query: 445 TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT 504
G VF P KTLKV +YMG+GW DF S PD Y R+ IAGVP D
Sbjct: 387 AGSSG-VFYPTENPVVVKTLKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIAGVPHDE 444
Query: 505 VMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564
+ T + W P+W EEF FPL+ P+LAL+ EV++Y++S D F GQTCLPVSEL +
Sbjct: 445 KIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTPDYFCGQTCLPVSELIE 504
Query: 565 GIRAVPLHDRKGERYKSVKLLMHFEF 590
GIRAVPL+D +G+ S LL F++
Sbjct: 505 GIRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| UNIPROTKB|E1BJE0 PLCD3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 94/243 (38%), Positives = 128/243 (52%)
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
V P + SLSE++ + + GN VR R+L R+YP G+R++S+NY+P W+ G
Sbjct: 543 VPPQPCQVSSLSERKAKKLIREAGNSFVRHNARHLTRVYPLGLRMNSANYSPQEMWNSGC 602
Query: 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 466
Q+VA N Q G + L G F NG CGY+ KP L P N FDP+ P + TL +
Sbjct: 603 QLVALNFQTPGYEMDLNAGRFLVNGQCGYILKPVRL--RSP-NTTFDPECPGPPRTTLTI 659
Query: 467 TVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTK-TLEDNWIPSWNEEF 524
V + P + + S D R+ I GVPAD KKT L + + P W +
Sbjct: 660 QVLTAQ----QLPKLNTEKPNSIVDPLVRIEIHGVPADCARKKTNYVLNNGFNPRWGQTL 715
Query: 525 EFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKL 584
EF L VPELAL+R V +YD + +DF GQ LP+S LKQG R + L + G L
Sbjct: 716 EFQLRVPELALVRFVVEDYDATSPNDFVGQFTLPLSSLKQGYRHIHLLSKDGASLSPATL 775
Query: 585 LMH 587
+H
Sbjct: 776 FVH 778
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q39033 | PLCD2_ARATH | 3, ., 1, ., 4, ., 1, 1 | 0.7297 | 0.9813 | 0.9982 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00080618 | hypothetical protein (590 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| estExt_fgenesh4_pg.C_LG_I1618 | hypothetical protein (586 aa) | • | • | • | 0.915 | ||||||
| eugene3.00101828 | hypothetical protein (587 aa) | • | • | • | 0.915 | ||||||
| fgenesh4_pm.C_LG_X000745 | phosphoinositide phospholipase C (EC-3.1.4.11) (571 aa) | • | • | • | 0.915 | ||||||
| fgenesh4_pm.C_LG_VIII000270 | phosphoinositide phospholipase C (EC-3.1.4.11) (590 aa) | • | • | • | 0.914 | ||||||
| fgenesh4_pg.C_LG_I001629 | hypothetical protein (573 aa) | • | • | • | 0.914 | ||||||
| gw1.IX.3737.1 | hypothetical protein (573 aa) | • | • | • | 0.910 | ||||||
| fgenesh4_pm.C_LG_XII000263 | hypothetical protein (810 aa) | • | • | 0.901 | |||||||
| gw1.XVII.1286.1 | hypothetical protein (419 aa) | • | 0.899 | ||||||||
| gw1.VII.2836.1 | hypothetical protein (536 aa) | • | 0.899 | ||||||||
| gw1.V.5135.1 | hypothetical protein (727 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 591 | |||
| PLN02222 | 581 | PLN02222, PLN02222, phosphoinositide phospholipase | 0.0 | |
| PLN02952 | 599 | PLN02952, PLN02952, phosphoinositide phospholipase | 0.0 | |
| PLN02228 | 567 | PLN02228, PLN02228, Phosphoinositide phospholipase | 0.0 | |
| PLN02230 | 598 | PLN02230, PLN02230, phosphoinositide phospholipase | 0.0 | |
| PLN02223 | 537 | PLN02223, PLN02223, phosphoinositide phospholipase | 1e-133 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 7e-84 | |
| pfam00388 | 145 | pfam00388, PI-PLC-X, Phosphatidylinositol-specific | 2e-66 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 6e-65 | |
| smart00149 | 115 | smart00149, PLCYc, Phospholipase C, catalytic doma | 2e-58 | |
| smart00148 | 143 | smart00148, PLCXc, Phospholipase C, catalytic doma | 7e-55 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 3e-43 | |
| cd00275 | 128 | cd00275, C2_PLC_like, C2 domain present in Phospho | 2e-41 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 5e-38 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 7e-37 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 8e-37 | |
| pfam00387 | 117 | pfam00387, PI-PLC-Y, Phosphatidylinositol-specific | 4e-36 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 5e-36 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 2e-33 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 3e-33 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 5e-33 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 1e-31 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 4e-31 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-30 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 1e-29 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 2e-28 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 9e-28 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 2e-27 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 1e-26 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 3e-25 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 8e-25 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 4e-24 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 8e-22 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 7e-21 | |
| pfam00168 | 85 | pfam00168, C2, C2 domain | 2e-20 | |
| smart00239 | 101 | smart00239, C2, Protein kinase C conserved region | 3e-20 | |
| cd00137 | 274 | cd00137, PI-PLCc, Catalytic domain of prokaryotic | 5e-20 | |
| pfam09279 | 83 | pfam09279, efhand_like, Phosphoinositide-specific | 2e-19 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 3e-19 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 4e-17 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 9e-16 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 4e-15 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 2e-14 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 2e-14 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 2e-13 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 5e-13 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 6e-13 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 6e-13 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 2e-12 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 8e-12 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 2e-11 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 1e-10 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 2e-10 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 3e-10 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 6e-10 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 2e-09 | |
| cd00030 | 102 | cd00030, C2, C2 domain | 2e-09 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 3e-09 | |
| cd08557 | 271 | cd08557, PI-PLCc_bacteria_like, Catalytic domain o | 6e-08 | |
| cd04025 | 123 | cd04025, C2B_RasA1_RasA4, C2 domain second repeat | 4e-07 | |
| cd08555 | 179 | cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phos | 5e-07 | |
| cd04026 | 131 | cd04026, C2_PKC_alpha_gamma, C2 domain in Protein | 3e-06 | |
| cd04040 | 115 | cd04040, C2D_Tricalbin-like, C2 domain fourth repe | 6e-06 | |
| cd08675 | 137 | cd08675, C2B_RasGAP, C2 domain second repeat of Ra | 6e-05 | |
| COG5038 | 1227 | COG5038, COG5038, Ca2+-dependent lipid-binding pro | 6e-05 | |
| cd04042 | 121 | cd04042, C2A_MCTP_PRT, C2 domain first repeat foun | 4e-04 | |
| cd08373 | 127 | cd08373, C2A_Ferlin, C2 domain first repeat in Fer | 0.001 | |
| cd04032 | 127 | cd04032, C2_Perforin, C2 domain of Perforin | 0.001 | |
| cd08391 | 121 | cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir | 0.001 | |
| cd04038 | 145 | cd04038, C2_ArfGAP, C2 domain present in Arf GTPas | 0.002 | |
| cd00276 | 134 | cd00276, C2B_Synaptotagmin, C2 domain second repea | 0.002 | |
| cd04030 | 127 | cd04030, C2C_KIAA1228, C2 domain third repeat pres | 0.003 | |
| cd04024 | 128 | cd04024, C2A_Synaptotagmin-like, C2 domain first r | 0.004 | |
| cd08384 | 133 | cd08384, C2B_Rabphilin_Doc2, C2 domain second repe | 0.004 |
| >gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Score = 942 bits (2435), Expect = 0.0
Identities = 430/592 (72%), Positives = 498/592 (84%), Gaps = 12/592 (2%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLK+RIIISTKPPKEY E K+++ Q+GK DEE WG+EVP+ N S D
Sbjct: 235 SPNSLKKRIIISTKPPKEYKEGKDDEV----VQKGKDLGDEEVWGREVPSFIQRNKSV-D 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
K+D +G D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KNDSNGDDDDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRS 419
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQG+GRS
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRS 409
Query: 420 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479
LWLM GMFRANGGCGY+KKP+ LL++G +++FDPK LP K TL+VT+YMGEGWY+DF
Sbjct: 410 LWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469
Query: 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539
HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FEFPL+VPELALLR+E
Sbjct: 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLE 529
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
VHEYDMSEKDDFGGQTCLPV EL QGIRA PLH RKGE+YKSVKLL+ EF+
Sbjct: 530 VHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581
|
Length = 581 |
| >gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 828 bits (2141), Expect = 0.0
Identities = 364/594 (61%), Positives = 448/594 (75%), Gaps = 11/594 (1%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKAS 59
Y++ F R+F + +E PD VK +F ++S G M D L RFL+ Q E +
Sbjct: 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCT 73
Query: 60 KEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYL-FGDINPPLSPTPVVHHDMTAPVSH 117
+AQ I++ + H+ + R GLNL+ FF +L + D+N P+ TP VHHDMTAP+SH
Sbjct: 74 LAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYDDLNGPI--TPQVHHDMTAPLSH 131
Query: 118 YFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAP 177
YFIYTGHNSYLTGNQL+SDCS+VPI++ALQ+GVRVIELD+WP S KD + VLHG T+T P
Sbjct: 132 YFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLTTP 191
Query: 178 VELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237
V LIKCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++L+ P S+ L +
Sbjct: 192 VPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251
Query: 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 297
FPSPESLK RIIISTKPPKEYLE+ + + + +E L+S+
Sbjct: 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETEEAQTLESMLFEQ 311
Query: 298 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ D D+D++D +KS + P Y++LI IHAGKPKG LK+ +KV DKVRRLSL
Sbjct: 312 ----EADSRSDSDQDD--NKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSL 365
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHG 417
SEQ+LE A T G D+VRFTQRN+LRIYPKG R+ SSNY PLIGW HGAQM+AFNMQG+G
Sbjct: 366 SEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYG 425
Query: 418 RSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYD 477
+SLWLMHGMFRANGGCGY+KKP+FL++ G H+EVFDPK KLP KKTLKV VY+G+GW D
Sbjct: 426 KSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWRLD 485
Query: 478 FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 537
F HTHFD+YSPPDFY ++ I GVPAD KKTK +EDNW P+WNEEF FPL+VPELALLR
Sbjct: 486 FSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLR 545
Query: 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
IEV EYDMSEKDDFGGQTCLPVSEL+ GIR+VPLHD+KGE+ K+V+LLM F F+
Sbjct: 546 IEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599
|
Length = 599 |
| >gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 702 bits (1814), Expect = 0.0
Identities = 316/588 (53%), Positives = 395/588 (67%), Gaps = 33/588 (5%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
++++VCFC R F E P ++K +F+ YS NG M+ D L RF+ EVQ E A
Sbjct: 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHA---G 58
Query: 63 AQAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY 121
+ D +KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+Y
Sbjct: 59 LDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVY 118
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L
Sbjct: 119 TGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQ 178
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL +IK+ AF S+YPVVITLEDHL P+LQA+VA+M+T+T +LF SE K FPSP
Sbjct: 179 KCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSP 238
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLE+K + + E +W + + N
Sbjct: 239 EELKNKILISTKPPKEYLESKTVQTTRTPT------VKETSWKR----VADAENKI---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
EE D++S EA YR LIAIHA K LK+CL DP+K R+S+ EQ
Sbjct: 285 --------LEEYKDEES---EAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQW 333
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421
LE V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQGHG+ LW
Sbjct: 334 LETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLW 393
Query: 422 LMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHT 481
+M GMFRANGGCGYVKKP LL +FDP +LP K TLKV +Y GEGW DF T
Sbjct: 394 IMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLT 450
Query: 482 HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEV 540
HFD YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F L VPELALL +V
Sbjct: 451 HFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKV 510
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
+YD ++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct: 511 QDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSF 558
|
Length = 567 |
| >gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Score = 682 bits (1761), Expect = 0.0
Identities = 343/595 (57%), Positives = 437/595 (73%), Gaps = 13/595 (2%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKED-KASKED 62
+Y+ C F R+F + S V+ +F++Y++ + M+ + L + + E + + S E+
Sbjct: 9 SYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEE 68
Query: 63 AQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFI 120
A+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI
Sbjct: 69 AERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFI 126
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 FTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKL 185
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ SE +EFPS
Sbjct: 186 GKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEFPS 245
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PE LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S +
Sbjct: 246 PEELKEKILISTKPPKEYLEANDAKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKV 303
Query: 301 DDFDGGVDNDEED----SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
++ D+E+ D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLS
Sbjct: 304 TSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLS 363
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGH 416
LSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQG+
Sbjct: 364 LSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGY 423
Query: 417 GRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 476
GR+LWLM GMFRANGGCGYVKKP+FL+ GP+ + F PK KKTLKV V MG+GW
Sbjct: 424 GRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGWLL 483
Query: 477 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 536
DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P WN+EF FPL+VPELALL
Sbjct: 484 DFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALL 543
Query: 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591
R+EVHE+D++EKDDFGGQTCLPVSE++QGI AVPL +RKG +Y S +LLM FEF+
Sbjct: 544 RVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598
|
Length = 598 |
| >gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 400 bits (1028), Expect = e-133
Identities = 227/591 (38%), Positives = 319/591 (53%), Gaps = 71/591 (12%)
Query: 13 RRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIIDS 69
R++F + + PD + + F +++ + L RF L++ +K++ + +A I
Sbjct: 4 RKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIA- 62
Query: 70 LRELKH----LNIFQR-RGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTG 123
ELK + F+ R L L+ ++LF ++NPP+ V HHDM AP+SHYFI+T
Sbjct: 63 -AELKRRKCDILAFRNLRCLELDHLNEFLFSTELNPPIGDQ-VRHHDMHAPLSHYFIHTS 120
Query: 124 HNSYLTGNQL-NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
SY TGN + S PII AL++GVRV+ELD+ P+ K D + V P+EL +
Sbjct: 121 LKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGK-DGICVRPKWNFEKPLELQE 179
Query: 183 CLRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPS 240
CL +IKE+AF YP++IT +D L PDLQ+K +M+ QT G++++ L+EFPS
Sbjct: 180 CLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
P L+ +I+IS +PPKE L AK
Sbjct: 240 PAELQNKILISRRPPKELLYAK-------------------------------------- 261
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DGGV E + + Y+ L+ HA +P+G L++ L D +++
Sbjct: 262 -ADDGGVGVRNEL--EIQEGPADKNYQSLVGFHAVEPRGMLQKALTGKADDIQQ------ 312
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS-SNYNPLIGWSHGAQMVAFNMQGHGRS 419
G Y DI+ FTQ+ LR PK + + Y P W HGAQ++A + +
Sbjct: 313 -----PGWYERDIISFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEK 367
Query: 420 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479
LWLM GMFRANGGCGYVKKP+FLL GP VF P K LKV +YMG+GW DF
Sbjct: 368 LWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWIVDF- 425
Query: 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539
S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+LAL+ E
Sbjct: 426 KKRIGRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFE 485
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
V++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 486 VYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 536
|
Length = 537 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 7e-84
Identities = 96/161 (59%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
HHDMTAP+SHYFI++ HNSYLTGNQL+S S PII AL +G RVIELD+WP + D +
Sbjct: 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGD-IC 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
VLHGGT+T PV+ C+++IKE AF ASEYPV+ITLE+HL+P+LQAK A+++ +TLG+ L
Sbjct: 60 VLHGGTLTKPVKFEDCIKAIKENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKL 119
Query: 228 FTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
F P SE +EFPSPE LK +I+IS KPP E + K
Sbjct: 120 FYPDSEDLPEEFPSPEELKGKILISDKPPVIRNSLSETQLK 160
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|215892 pfam00388, PI-PLC-X, Phosphatidylinositol-specific phospholipase C, X domain | Back alignment and domain information |
|---|
Score = 212 bits (543), Expect = 2e-66
Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 3/146 (2%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M+ P+SHYFI + HN+YLTG+QL S I+AL +G R +ELD W + V H
Sbjct: 1 MSQPLSHYFISSSHNTYLTGDQLTGKSSVEAYIQALLRGCRCVELDCW-DGPDGEPVVYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T+T+ + L +IKEYAFV SEYPV+++LE+H +P+ QAK+AE++ + G++L+TP
Sbjct: 60 GYTLTSKIPFRDVLEAIKEYAFVTSEYPVILSLENHCSPEQQAKMAEILKEIFGDMLYTP 119
Query: 231 --GSECLKEFPSPESLKRRIIISTKP 254
E E PSPE LK +I++ K
Sbjct: 120 PLDDESSTELPSPEDLKGKILLKVKK 145
|
This associates with pfam00387 to form a single structural unit. Length = 145 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 6e-65
Identities = 65/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL + S IRAL +G R +ELD W + V
Sbjct: 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +IKEYAFV S YPV+++LE+H + + Q K+A+++ + G+ L
Sbjct: 60 VYHGHTLTSKILFKDVIEAIKEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKP 254
T P E + PSPE LK +I+I K
Sbjct: 120 LTPPLDENPVQLPSPEQLKGKILIKGKK 147
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 2e-58
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 329 LIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKG 388
L+ A + +P S SE + + + D VR+ QR L R+YPKG
Sbjct: 3 LVIYCAPVKFRSFESAESKNP-FYEMSSFSETKAKKLLKKSPTDFVRYNQRQLSRVYPKG 61
Query: 389 IRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 442
RVDSSNYNP + W+HG QMVA N Q + + L GMFRANGGCGYV KP+FL
Sbjct: 62 TRVDSSNYNPQVFWNHGCQMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 115 |
| >gnl|CDD|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 7e-55
Identities = 63/144 (43%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M P+SHYFI + HN+YLTG QL + S I+AL G R +ELD W + V + H
Sbjct: 1 MDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDAGCRCVELDCWDGPDGEPV-IYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T T P++L + L +IK++AFV S YPV+++LE+H +PD QAK+A+M + G++L+TP
Sbjct: 60 GHTFTLPIKLSEVLEAIKDFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTP 119
Query: 231 GSECLKE-FPSPESLKRRIIISTK 253
E PSPE L+ +I++ +
Sbjct: 120 PLTSSLEVLPSPEQLRGKILLKVR 143
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 143 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 3e-43
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
D++ P++ YFI + HN+YL G QL D S IRALQ+G R +E+D+W + V V
Sbjct: 2 EDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPV-V 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ V R+IK+YAFV S YP++++LE H + Q ++ E++ +T G++L
Sbjct: 61 THGYTLTSSVPFRDVCRAIKKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLV 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTK 253
T P E PSPE L+ +I+I K
Sbjct: 121 TEPLDGLEDELPSPEELRGKILIKVK 146
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Score = 145 bits (369), Expect = 2e-41
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWI-P 518
TL + + G+ P D S D Y V I G+PA D+ KTK +++N P
Sbjct: 1 PLTLTIKIISGQQL----PKPKGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNP 56
Query: 519 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 578
WNE FEF ++VPELA LR V++ D DDF GQ CLP+ L+QG R VPL D KGE
Sbjct: 57 VWNETFEFDVTVPELAFLRFVVYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEP 115
Query: 579 YKSVKLLMHFEF 590
+ L +H +
Sbjct: 116 LELSTLFVHIDI 127
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-II topology. Length = 128 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 5e-38
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL +QL S IRAL+KG R +ELD W + +
Sbjct: 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++I+EYAF S YPV+++LE+H + + Q +A+ + LG+ L
Sbjct: 60 IYHGHTLTSKILFKDVIQAIREYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTK 253
T P L PSPE LK +I++ K
Sbjct: 120 LTQPLDGVLTALPSPEELKGKILVKGK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 7e-37
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DMT P+SHYFI + HN+YL +QL S +RALQ+G R +ELD W + V
Sbjct: 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + + +I EYAFVASEYP+++ +E+H + Q +A+ + + G+ L
Sbjct: 60 IYHGHTLTSKISFRSVIEAINEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+T P +E PSP LK +III K K KE
Sbjct: 120 YTEPPNEGESYLPSPHDLKGKIIIKGKKLKRRKLCKE 156
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 8e-37
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 6/162 (3%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
DM P+SHY+I + HN+YLTG+QL+S+ S R L+ G R IELD W + +
Sbjct: 2 QDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPI-I 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ ++ + L++IKE+AFV SEYPV++++E+H + Q +A+ + G++L
Sbjct: 61 YHGHTLTSKIKFMDVLKTIKEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPK----EYLEAKEEK 265
T P + PSP LKR+III K + E K EK
Sbjct: 121 TQPVDRNADQLPSPNQLKRKIIIKHKKLFYEMSSFPETKAEK 162
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 4e-36
Identities = 40/87 (45%), Positives = 51/87 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S SE + + + + V+ +R L R+YPKG+RVDSSNY+P W+ G QMVA N Q
Sbjct: 30 SFSETKAKKLLKESPAEFVKHNRRQLSRVYPKGLRVDSSNYDPQPFWNAGCQMVALNWQT 89
Query: 416 HGRSLWLMHGMFRANGGCGYVKKPNFL 442
+ L MF NG CGYV KP FL
Sbjct: 90 PDLGMQLNEAMFADNGRCGYVLKPEFL 116
|
This associates with pfam00388 to form a single structural unit. Length = 117 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 5e-36
Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 351 KVRRLSLSEQQLENAVGT-YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
V R SLSE QL+ + + D++ FTQ+NLLR+YP G+R+ SSNY+P++ W HGAQMV
Sbjct: 148 PVIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMV 207
Query: 410 AFNMQGHGRSLWLMHGMFRAN 430
A NMQG+ R LWL G FRAN
Sbjct: 208 ALNMQGYDRPLWLNRGKFRAN 228
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P+SHYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLSGCRCIELDCWDGKGEDEE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG TM + + +I E AF SEYPV+++ E+H + QAK+AE + G+
Sbjct: 60 PIITHGKTMCTEILFKDVIEAIAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTEPLEKYPLEPG----VPLPSPNDLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 3e-33
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ + + LG+ L
Sbjct: 60 VHHGYTLTSKILFRDVIETINKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTKP 254
+ K+ PSP+SLK +I+I K
Sbjct: 120 DLSSVISGDS-KQLPSPQSLKGKILIKGKK 148
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 127 bits (319), Expect = 5e-33
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ +
Sbjct: 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL
Sbjct: 60 IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPIL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPK 256
P PSPE LK +I++ K K
Sbjct: 120 LDQPLDGVTTSLPSPEQLKGKILLKGKKLK 149
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S SE + + + V++ +R L R+YPKG RVDSSNYNP W+ G QMVA N Q
Sbjct: 152 SFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQT 211
Query: 416 HGRSLWLMHGMFRAN 430
+ L G F N
Sbjct: 212 PDLPMQLNQGKFEQN 226
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-31
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DM+ P++HYFI + HN+YLT +Q+ S +RA +G R +ELD W + V
Sbjct: 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++++++AF AS YPV+++LE+H + QA +A + LG++L
Sbjct: 60 IYHGHTLTSKILFRDVIQAVRQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDML 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
T S +E PSPE LK R+++ K
Sbjct: 120 VTQPLDSLNPEELPSPEELKGRVLVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-30
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
+M P+SHY+I + HN+YLTG+Q +S+ S R L+ G R IELD W D + V+
Sbjct: 3 EMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVI 60
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T ++ L +IKE+AFV SEYP+++++EDH + Q +A+ + G++L
Sbjct: 61 YHGHTLTTKIKFSDVLHTIKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 276
T P PSP LKR+I+I K + + E + E R KG
Sbjct: 121 TKPVDINADGLPSPNQLKRKILIKHKKLYRDMSSFPETKAEKYVNRSKG 169
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-29
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P++HYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLAGCRCIELDCWDGKGEDQE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG M + +++IK+ AFV S+YPV+++ E+H + Q K+A+ + G+
Sbjct: 60 PIITHGKAMCTDILFKDVIQAIKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTKPLESHPLEPG----VPLPSPNKLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-28
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHY+I + HN+YLTG+QL S+ S IR L+ G R IELD W + +
Sbjct: 3 DMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPDGKPI-IY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-ILF 228
HG T T ++ +++IK++AFV SEYPV++++E+H + + Q +A++ + G+ +L
Sbjct: 62 HGWTRTTKIKFDDVVQAIKDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLM 121
Query: 229 TPGSECLKEFPSPESLKRRIIISTK 253
P + PSP LK +III K
Sbjct: 122 KPLEASADQLPSPTQLKEKIIIKHK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 9e-28
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+S YFI + HN+YL +QL + AL+KG R +E+D W + + V
Sbjct: 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + + ++++YAF S+YPVV++LE+H + + Q +A + LGE L
Sbjct: 60 VYHGYTLTSKILFKEVITTVEKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKL 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
E PSPE+LK +I++ K
Sbjct: 120 LRAPIDDPATGELPSPEALKFKILVKNK 147
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 2e-27
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL+G+QL S LQ G R +E+D W + +
Sbjct: 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI- 226
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ +T+ LG+
Sbjct: 60 VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKL 119
Query: 227 -LFTPGSECLKEFPSPESLKRRIIISTKP 254
L + S PSPE LK +I++ K
Sbjct: 120 DLSSVISNDCTRLPSPEILKGKILVKGKK 148
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+ HYFI + HN+YL +QL S IRAL++G R +E+D+W + +
Sbjct: 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T T+ + + ++ +YAF S+YPV+++LE+H + Q +A+ +T+ LGE L
Sbjct: 60 VYHGHTFTSKILFKDVVAAVAQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKL 119
Query: 228 F--TPGSECLKEFPSPESLKRRIIISTK 253
T + PSPE L+ +I++ K
Sbjct: 120 LSTTLDGVLPTQLPSPEELRGKILLKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
D+ P+S+Y+I + HN+YLTG+QL + S + L G R +ELD W + +
Sbjct: 3 DLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCW-DGDDGMPIIY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229
HG T+T + + +I AF+ S+YPV++++E+H + Q K+AE+ GE L T
Sbjct: 62 HGHTLTTKIPFKDVVEAINRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVT 121
Query: 230 PGSECLKE--------FPSPESLKRRIIISTKPPKE 257
+ L E PSP LK +I++ K E
Sbjct: 122 ---KFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE 154
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 8e-25
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+ +YFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAFV +E+PV++++E+H + Q K+A+ + + G+ L
Sbjct: 60 VHHGYTLTSKITFRDVIETINKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTK 253
+ K+ PSP+ LK +I++ K
Sbjct: 120 DLSSVLTGDP-KQLPSPQLLKGKILVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 4e-24
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 19/184 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
H DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D
Sbjct: 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEP 60
Query: 168 VL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGE 225
++ HG TMT + + +I E AF S YPV+++ E+H+ +P QAK+AE G+
Sbjct: 61 IITHGFTMTTEILFKDAIEAIAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGD 120
Query: 226 ILFTPGSECLKEF--------PSPESLKRRIIISTKPPKE------YLEAKEEKEKENDS 271
+L T E L+++ PSPE L+ +I+I K +E Y++ + E +
Sbjct: 121 MLLT---EPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEEMSSLVNYIQPTKFVSFEFSA 177
Query: 272 QRGK 275
Q+ +
Sbjct: 178 QKNR 181
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 8e-22
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHYFI + HN+YLT QL S + L G R IELD W + +
Sbjct: 3 DMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 63 THGFTMTTEIPFKDVIEAIAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDAL 122
Query: 228 ---------FTPGSECLKEFPSPESLKRRIIISTKPPK---EYLEAKEEKEKENDSQRGK 275
PG + PSP+ L +I++ K Y+E + K E ++R K
Sbjct: 123 LIDPLDKYPLVPG----VQLPSPQELMGKILVKNKKMSTLVNYIEPVKFKSFEAAAKRNK 178
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 92.1 bits (228), Expect = 7e-21
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM+ P+SHYFI + HN+YLT QL + S + L G R +ELD W + V+
Sbjct: 3 DMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S +P++++ E+H+ +P QAK+AE G+ L
Sbjct: 63 THGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 122
Query: 228 FTPGSECLKEF--------PSPESLKRRIIISTK 253
E L+++ PSP L +I++ K
Sbjct: 123 LM---EPLEKYPLESGVPLPSPMDLMYKILVKNK 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|215765 pfam00168, C2, C2 domain | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-20
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 523
L+VTV + D D Y +V + G DT KKTK +++ P WNE
Sbjct: 1 LRVTVISAKNL------PPKDLNGKSDPYVKVSLGGQKKDT--KKTKVVKNTLNPVWNET 52
Query: 524 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 556
F F +++PELA LRIEV++YD KDDF G+
Sbjct: 53 FTFEVTLPELAELRIEVYDYDRFGKDDFIGEVT 85
|
Length = 85 |
| >gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 3e-20
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 522
TL V + D D Y +V + G P KKTK +++ P WNE
Sbjct: 1 TLTVKIISARNL------PPKDKGGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNE 52
Query: 523 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 571
FEF + PELA L IEV++ D +DDF GQ +P+S+L G R L
Sbjct: 53 TFEFEVPPPELAELEIEVYDKDRFGRDDFIGQVTIPLSDLLLGGRHEKL 101
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. Length = 101 |
| >gnl|CDD|176497 cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 5e-20
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-----CSDVPIIRALQKGVRVIELDIWPNSK 162
HH T P++HY I H++YLT Q + L G R +++ W
Sbjct: 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDG-- 58
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH--LTPDLQAKVAEMVT 220
K +++ G + L + + +I ++ ++++L++ QAK+AE
Sbjct: 59 KPEEPIIYHGPTFLDIFLKEVIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCR 118
Query: 221 QTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRG 274
G++L TP + PS E L+ +I++ + ND+
Sbjct: 119 TIFGDMLLTPPLKPTVPLPSLEDLRGKILLL----NKKNGFSGPTGSSNDTGFV 168
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 274 |
| >gnl|CDD|150071 pfam09279, efhand_like, Phosphoinositide-specific phospholipase C, efhand-like | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 2e-19
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ +F +YS N G +T + L RFL E QK+ + ++E A AII+ + + +R L+
Sbjct: 2 IDELFKEYSSNKGVLTAEELRRFLNEEQKDPRLTEEQALAIIE--KYEPNEEAKKRGQLS 59
Query: 86 LEAFFKYLFGDINPPLSP 103
L+ F +YLF D N +P
Sbjct: 60 LDGFTRYLFSDENSIFNP 77
|
Members of this family are predominantly found in phosphoinositide-specific phospholipase C. They adopt a structure consisting of a core of four alpha helices, in an EF like fold, and are required for functioning of the enzyme. Length = 83 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 3e-19
Identities = 35/76 (46%), Positives = 41/76 (53%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S SE + V +RF QR L RIYP R+DSSN+NP W+ G Q+VA N Q
Sbjct: 152 SSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ 211
Query: 415 GHGRSLWLMHGMFRAN 430
GR L L FRAN
Sbjct: 212 TEGRMLQLNRAKFRAN 227
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 4e-17
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S SE + GN+ VR +R L RIYP G+R DSSNY+P W+ G Q+VA N Q
Sbjct: 183 SFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQT 242
Query: 416 HGRSLWLMHGMFRAN 430
G + L G+FR N
Sbjct: 243 PGEEMDLNDGLFRQN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 9e-16
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
SLSE+ L + + + +R+L+R+YP G R+ SSN+NPL W G QMVA N Q
Sbjct: 157 SLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQT 216
Query: 416 HGRSLWLMHGMFRAN 430
+ + L MF +
Sbjct: 217 YDLGMQLNEAMFAGS 231
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 4e-15
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S +E + + GN+ V+ L R+YP G+R DSSNYNP W+ G QMVA N Q
Sbjct: 184 SFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQT 243
Query: 416 HGRSLWLMHGMFRAN 430
G + L G+FR N
Sbjct: 244 AGLEMDLNDGLFRQN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 73.2 bits (179), Expect = 2e-14
Identities = 36/75 (48%), Positives = 40/75 (53%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S SE + + +RF QR L RIYP RVDSSNYNP W+ G QMVA N Q
Sbjct: 180 SFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQS 239
Query: 416 HGRSLWLMHGMFRAN 430
GR L L F AN
Sbjct: 240 EGRMLQLNRAKFSAN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 2e-14
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LS SE + V + + Q+ L RIYP R+DSSN+NPL W+ G Q+VA N Q
Sbjct: 178 LSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ 237
Query: 415 GHGRSLWLMHGMFRAN 430
GR + L F N
Sbjct: 238 SEGRMMQLNRAKFMVN 253
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 2e-13
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 369 YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFR 428
G +++ +R L R+YPKG RVDSSNY+P+ W+ G+QMVA N Q + + L +F
Sbjct: 168 KGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFM 227
Query: 429 AN 430
N
Sbjct: 228 LN 229
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 5e-13
Identities = 33/75 (44%), Positives = 41/75 (54%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
SL+E + Y +V+ T+ LLR YP R+DSSN NPLI W HG Q+VA N Q
Sbjct: 180 SLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQT 239
Query: 416 HGRSLWLMHGMFRAN 430
+ L MF AN
Sbjct: 240 DDLPMHLNAAMFEAN 254
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 6e-13
Identities = 32/75 (42%), Positives = 40/75 (53%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S +E + + + V + +R L RIYPKG RVDSSNY P I W+ G QMVA N Q
Sbjct: 183 SFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQT 242
Query: 416 HGRSLWLMHGMFRAN 430
+ L G F N
Sbjct: 243 PDLPMQLNQGKFEYN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 6e-13
Identities = 34/75 (45%), Positives = 42/75 (56%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S+ E + + + G D V TQR + RIYPKG R SSNYNP W+ G QMVA N Q
Sbjct: 183 SIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQT 242
Query: 416 HGRSLWLMHGMFRAN 430
G + L +G F N
Sbjct: 243 LGAPMDLQNGKFLDN 257
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 2e-12
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 325 EYRKLIAIHAG------KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 378
+++KLIAI KP K+ L+ +PD S E + + + ++++ +
Sbjct: 144 KHKKLIAIELSDLVVYCKPTSKTKDNLE-NPDFKEIRSFVETKAPSIIRQKPVQLLKYNR 202
Query: 379 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 430
+ L R+YPKG RVDSSNY+P W G+QMVA N Q + + L H +F N
Sbjct: 203 KGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 8e-12
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S +E + T + V + +R + RIYPKG RVDSSNY P I W+ G QMV+ N Q
Sbjct: 183 SFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQT 242
Query: 416 HGRSLWLMHGMFRAN 430
+ L G F N
Sbjct: 243 PDLGMQLNQGKFEYN 257
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
SLSE++ + + GN VR R L R+YP G+R++S+NY+P W+ G Q+VA N Q
Sbjct: 184 SLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT 243
Query: 416 HGRSLWLMHGMFRAN 430
G + L G F N
Sbjct: 244 PGYEMDLNAGRFLVN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 370 GNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA 429
GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N Q G + + G F+
Sbjct: 198 GNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQD 257
Query: 430 N 430
N
Sbjct: 258 N 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 430
+ V + + L RIYPKG RVDSSNY P + W+ G QMVA N Q S+ + GM+ N
Sbjct: 200 EFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 415
S SE + D V + ++ L R+YP +RVDSSNYNP W+ G Q+VA N Q
Sbjct: 186 SFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQT 245
Query: 416 HGRSLWLMHGMFRAN 430
G + L G F N
Sbjct: 246 PGLMMDLNTGKFLEN 260
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 6e-10
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 430
+ V + ++ L RIYPKG RVDSSNY P + W+ G QMVA N Q ++ L G+F N
Sbjct: 200 EFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 356 SLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S E + E V + G +++ +R L RIYPKG R+DSSNY+PL W G+Q+VA N Q
Sbjct: 154 SFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ 213
Query: 415 GHGRSLWLMHGMFRAN 430
+ + + +F
Sbjct: 214 TPDKPMQMNQALFMLG 229
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|175973 cd00030, C2, C2 domain | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 2e-09
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543
D D Y +V + G KTK +++ P WNE FEFP+ PE L +EV +
Sbjct: 15 DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70
Query: 544 DMSEKDDFGGQTCLPVSELKQ 564
D KDDF G+ +P+SEL
Sbjct: 71 DRFSKDDFLGEVEIPLSELLD 91
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 102 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 3e-09
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S +E + + + V + +R + RIYPKG R+DSSNY P + W+ G QMVA N Q
Sbjct: 187 SFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQ 245
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 109 HDMTAPVSHYFIYTGHNSY-------LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS 161
P+S I HNSY S D+ I L GVR ++L + +
Sbjct: 3 LLDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDP 62
Query: 162 KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA---SEYPVVITLEDHLTPD---LQAKV 215
++ V HG + L L +K F+ SE V++ LE D ++
Sbjct: 63 DDGDLYVCHGLFLLNGQTLEDVLNEVK--DFLDAHPSE-VVILDLEHEYGGDNGEDHDEL 119
Query: 216 AEMVTQTLGEILFTP 230
++ LG+ L+ P
Sbjct: 120 DALLRDVLGDPLYRP 134
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD). They are distinct from the typical eukaryotic phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11), which have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, which is closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be distinct from that of typical eukaryotic PI-PLCs. This family also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host's immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 271 |
| >gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 490 DFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 548
D + RV G +T V+KK+ P WNE FEF L + L +EV ++D+ K
Sbjct: 22 DPFVRVFYNGQTLETSVVKKSC------YPRWNEVFEFELMEGADSPLSVEVWDWDLVSK 75
Query: 549 DDFGGQTCLPVSELKQ 564
+DF G+ + L+Q
Sbjct: 76 NDFLGKVVFSIQTLQQ 91
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 123 |
| >gnl|CDD|176498 cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 5e-07
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------ 176
H Y Q N+ RAL G R +ELD+ +K + V HG T+
Sbjct: 3 SHRGYSQNGQENTL---EAFYRALDAGARGLELDVRL-TKDGELVVYHGPTLDRTTAGIL 58
Query: 177 PVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKVAE 217
P L + L I +Y +Y ++++LE + AKV +
Sbjct: 59 PPTLEEVLELIADYLK-NPDYTIILSLEIKQDSPEYDEFLAKVLK 102
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols that are major sources of carbon and phosphate. Both, PI-PLCs and GP-GDEs, can hydrolyze the 3'-5' phosphodiester bonds in different substrates, and utilize a similar mechanism of general base and acid catalysis with conserved histidine residues, which consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81, glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs). The residues essential for enzyme activities and metal binding are not conserved in these sequence homologs, which might suggest that the function of catalytic domains in these proteins might be distinct from those in typical PLC-like phosphodiesterases. Length = 179 |
| >gnl|CDD|175992 cd04026, C2_PKC_alpha_gamma, C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 501 PADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-ELALLRIEVHEYDMSEKDDFGGQTCLPV 559
P + +KTKT++ P WNE F F L + L IEV ++D + ++DF G V
Sbjct: 46 PKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEVWDWDRTTRNDFMGSLSFGV 105
Query: 560 SEL 562
SEL
Sbjct: 106 SEL 108
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 131 |
| >gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 6e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL---K 563
KTL P WNE FE P+ A+L++EV+++D KDD G + +S+L +
Sbjct: 38 TIKKTLN----PVWNESFEVPVPSRVRAVLKVEVYDWDRGGKDDLLGSAYIDLSDLEPEE 93
Query: 564 QGIRAVPLHDRKGERYKSVKL 584
+PL + G + +V L
Sbjct: 94 TTELTLPLDGQGGGKLGAVFL 114
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the fifth C2 repeat, C2E, and has a type-II topology. Length = 115 |
| >gnl|CDD|176057 cd08675, C2B_RasGAP, C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 490 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELA 534
D +ARV + T K+TK + P ++E F F L++ E +
Sbjct: 20 DPFARV-TLNYSSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEEEDLEKS 78
Query: 535 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564
LR+E+ M DDF G+ +P+ L+Q
Sbjct: 79 ELRVELWHASMVSGDDFLGEVRIPLQGLQQ 108
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 137 |
| >gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 6e-05
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
KTK ++ P WNEEF + +L I V+++D EK+D G + +S+L+ G
Sbjct: 1076 KTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVNDWDSGEKNDLLGTAEIDLSKLEPG 1133
|
Length = 1227 |
| >gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-- 565
K+KT+ N P W+E+F P+ L I+V +YD DDF G + +S L+
Sbjct: 36 KSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFDYDRGLTDDFMGSAFVDLSTLELNKP 94
Query: 566 -IRAVPLHDRKGERYKSVKLL 585
+ L D + L
Sbjct: 95 TEVKLKLEDPNSDEDLGYISL 115
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 121 |
| >gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL-ALLRIEVHEYDMS 546
D A+V GV KKT+ LE+ P WNE FE+PL P+ L I V +Y+
Sbjct: 15 GDRIAKVTFRGVK-----KKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEKV 69
Query: 547 EKDDFGGQTCLPVSEL 562
++ G + + +L
Sbjct: 70 GRNRLIGSATVSLQDL 85
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 127 |
| >gnl|CDD|175998 cd04032, C2_Perforin, C2 domain of Perforin | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 459 PAKK---TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 515
P ++ TL VTV G + D+ ++ D Y +V G K+T+ + +N
Sbjct: 22 PTRRGLATLTVTVLRATGLWGDY-------FTSTDGYVKVFFGGQ-----EKRTEVIWNN 69
Query: 516 WIPSWNEEFEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 567
P WN F+F + + LR EV + D DD G TC + G+
Sbjct: 70 NNPRWNATFDFGSVELSPGGKLRFEVWDRDNGWDDDLLG-TC--SVVPEAGVH 119
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 127 |
| >gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGI 566
K+K +++N P WNE +E + L IE+ + D +KDDF G+ + + K+G
Sbjct: 42 KSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFDEDP-DKDDFLGRLSIDLGSVEKKGF 100
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains either the first or third repeat in Synaptotagmin-like proteins with a type-I topology. Length = 121 |
| >gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEVHEYDMSEKDDFGG 553
KT+ ++ N P WNEE SVP L++EV + D KDD G
Sbjct: 35 VKTRVIKKNLNPVWNEELTL--SVPNPMAPLKLEVFDKDTFSKDDSMG 80
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 145 |
| >gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 484 DAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 539
D D Y +V + + KKT + P +NE F F + +L L I
Sbjct: 30 DGKGLSDPYVKVSL--LQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87
Query: 540 VHEYDMSEKDDFGGQTCL 557
V + D +++ GQ L
Sbjct: 88 VVDKDSVGRNEVIGQVVL 105
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 134 |
| >gnl|CDD|175996 cd04030, C2C_KIAA1228, C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540
+KT +DN P ++E FEFP+S+ EL ++V
Sbjct: 55 RKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. Length = 127 |
| >gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.004
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP------VSE 561
KT+T+ + P WN EFP+ + LL++ + + D D+ G+ + +
Sbjct: 38 KTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILWDKDRFAGKDYLGEFDIALEEVFADGK 97
Query: 562 LKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
Q + + L + + V +H +F
Sbjct: 98 TGQSDKWITLKSTRPGKTSVVSGEIHLQF 126
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-I topology. Length = 128 |
| >gnl|CDD|176030 cd08384, C2B_Rabphilin_Doc2, C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 508 KTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGG 553
K KTL P +NEEF + + +LA L I V + D+ + +D+ G
Sbjct: 57 KKKTLN----PEFNEEFFYDIKHSDLAKKTLEITVWDKDIGKSNDYIG 100
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 133 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| PLN02222 | 581 | phosphoinositide phospholipase C 2 | 100.0 | |
| PLN02230 | 598 | phosphoinositide phospholipase C 4 | 100.0 | |
| PLN02228 | 567 | Phosphoinositide phospholipase C | 100.0 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 100.0 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 100.0 | |
| PLN02223 | 537 | phosphoinositide phospholipase C | 100.0 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| cd08629 | 258 | PI-PLCc_delta1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08633 | 254 | PI-PLCc_eta2 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08630 | 258 | PI-PLCc_delta3 Catalytic domain of metazoan phosph | 100.0 | |
| cd08624 | 261 | PI-PLCc_beta2 Catalytic domain of metazoan phospho | 100.0 | |
| cd08632 | 253 | PI-PLCc_eta1 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08595 | 257 | PI-PLCc_zeta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08631 | 258 | PI-PLCc_delta4 Catalytic domain of metazoan phosph | 100.0 | |
| cd08596 | 254 | PI-PLCc_epsilon Catalytic domain of metazoan phosp | 100.0 | |
| cd08626 | 257 | PI-PLCc_beta4 Catalytic domain of metazoan phospho | 100.0 | |
| cd08623 | 258 | PI-PLCc_beta1 Catalytic domain of metazoan phospho | 100.0 | |
| cd08591 | 257 | PI-PLCc_beta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08593 | 257 | PI-PLCc_delta Catalytic domain of metazoan phospho | 100.0 | |
| cd08625 | 258 | PI-PLCc_beta3 Catalytic domain of metazoan phospho | 100.0 | |
| cd08594 | 227 | PI-PLCc_eta Catalytic domain of metazoan phosphoin | 100.0 | |
| cd08628 | 254 | PI-PLCc_gamma2 Catalytic domain of metazoan phosph | 100.0 | |
| cd08597 | 260 | PI-PLCc_PRIP_metazoa Catalytic domain of metazoan | 100.0 | |
| cd08558 | 226 | PI-PLCc_eukaryota Catalytic domain of eukaryotic p | 100.0 | |
| cd08598 | 231 | PI-PLC1c_yeast Catalytic domain of putative yeast | 100.0 | |
| cd08627 | 229 | PI-PLCc_gamma1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08592 | 229 | PI-PLCc_gamma Catalytic domain of metazoan phospho | 100.0 | |
| cd08599 | 228 | PI-PLCc_plant Catalytic domain of plant phosphatid | 100.0 | |
| cd00137 | 274 | PI-PLCc Catalytic domain of prokaryotic and eukary | 100.0 | |
| smart00149 | 115 | PLCYc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00387 | 118 | PI-PLC-Y: Phosphatidylinositol-specific phospholip | 100.0 | |
| smart00148 | 135 | PLCXc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00388 | 146 | PI-PLC-X: Phosphatidylinositol-specific phospholip | 100.0 | |
| cd08589 | 324 | PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc | 99.86 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 99.81 | |
| cd08590 | 267 | PI-PLCc_Rv2075c_like Catalytic domain of uncharact | 99.77 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 99.74 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 99.67 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 99.67 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 99.65 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 99.65 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 99.65 | |
| cd08557 | 271 | PI-PLCc_bacteria_like Catalytic domain of bacteria | 99.64 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 99.63 | |
| cd08677 | 118 | C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a | 99.63 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 99.63 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 99.62 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 99.62 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 99.62 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 99.61 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 99.61 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 99.6 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 99.6 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 99.59 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 99.59 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 99.59 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 99.57 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 99.57 | |
| cd04039 | 108 | C2_PSD C2 domain present in Phosphatidylserine dec | 99.57 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 99.57 | |
| cd08692 | 135 | C2B_Tac2-N C2 domain second repeat found in Tac2-N | 99.57 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 99.57 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 99.56 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 99.55 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 99.55 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 99.54 | |
| cd08407 | 138 | C2B_Synaptotagmin-13 C2 domain second repeat prese | 99.54 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 99.54 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 99.54 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 99.54 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 99.53 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 99.53 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 99.53 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 99.53 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 99.52 | |
| KOG1030 | 168 | consensus Predicted Ca2+-dependent phospholipid-bi | 99.52 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 99.52 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 99.52 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 99.52 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 99.51 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 99.51 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 99.51 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 99.51 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 99.51 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 99.51 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 99.5 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 99.5 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 99.5 | |
| cd08410 | 135 | C2B_Synaptotagmin-17 C2 domain second repeat prese | 99.5 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 99.5 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 99.5 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 99.49 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 99.48 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 99.48 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 99.48 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 99.48 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 99.48 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 99.48 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 99.47 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 99.47 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 99.46 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 99.46 | |
| cd04048 | 120 | C2A_Copine C2 domain first repeat in Copine. There | 99.46 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 99.45 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 99.45 | |
| PF09279 | 83 | EF-hand_like: Phosphoinositide-specific phospholip | 99.45 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 99.44 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 99.44 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 99.44 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 99.44 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 99.44 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 99.43 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 99.42 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 99.41 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 99.41 | |
| cd04037 | 124 | C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli | 99.41 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 99.38 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 99.38 | |
| cd08686 | 118 | C2_ABR C2 domain in the Active BCR (Breakpoint clu | 99.37 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 99.35 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 99.34 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 99.34 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 99.33 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 99.32 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 99.32 | |
| PLN03008 | 868 | Phospholipase D delta | 99.32 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.31 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 99.31 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 99.28 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 99.26 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 99.24 | |
| cd08555 | 179 | PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi | 99.22 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.15 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 99.13 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 99.03 | |
| cd08374 | 133 | C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli | 99.01 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 98.98 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 98.92 | |
| PLN02270 | 808 | phospholipase D alpha | 98.9 | |
| cd08586 | 279 | PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce | 98.88 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 98.84 | |
| cd08588 | 270 | PI-PLCc_At5g67130_like Catalytic domain of Arabido | 98.83 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.8 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 98.46 | |
| PLN02352 | 758 | phospholipase D epsilon | 98.38 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.07 | |
| cd08689 | 109 | C2_fungal_Pkc1p C2 domain found in protein kinase | 98.06 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.91 | |
| KOG1031 | 1169 | consensus Predicted Ca2+-dependent phospholipid-bi | 97.7 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 97.67 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 97.61 | |
| cd08622 | 276 | PI-PLCXDc_CG14945_like Catalytic domain of Drosoph | 97.6 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.57 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.55 | |
| cd08587 | 288 | PI-PLCXDc_like Catalytic domain of phosphatidylino | 97.51 | |
| cd08683 | 143 | C2_C2cd3 C2 domain found in C2 calcium-dependent d | 97.11 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 97.08 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 97.0 | |
| cd08398 | 158 | C2_PI3K_class_I_alpha C2 domain present in class I | 96.92 | |
| cd04012 | 171 | C2A_PI3K_class_II C2 domain first repeat present i | 96.89 | |
| cd08693 | 173 | C2_PI3K_class_I_beta_delta C2 domain present in cl | 96.87 | |
| cd08616 | 290 | PI-PLCXD1c Catalytic domain of phosphatidylinosito | 96.86 | |
| cd08380 | 156 | C2_PI3K_like C2 domain present in phosphatidylinos | 96.8 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 96.78 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 96.77 | |
| cd08556 | 189 | GDPD Glycerophosphodiester phosphodiesterase domai | 96.47 | |
| cd08562 | 229 | GDPD_EcUgpQ_like Glycerophosphodiester phosphodies | 96.4 | |
| cd08582 | 233 | GDPD_like_2 Glycerophosphodiester phosphodiesteras | 96.37 | |
| cd08397 | 159 | C2_PI3K_class_III C2 domain present in class III p | 96.26 | |
| cd08579 | 220 | GDPD_memb_like Glycerophosphodiester phosphodieste | 96.07 | |
| PF03009 | 256 | GDPD: Glycerophosphoryl diester phosphodiesterase | 96.06 | |
| cd08684 | 103 | C2A_Tac2-N C2 domain first repeat found in Tac2-N | 96.05 | |
| cd08563 | 230 | GDPD_TtGDE_like Glycerophosphodiester phosphodiest | 95.82 | |
| cd08399 | 178 | C2_PI3K_class_I_gamma C2 domain present in class I | 95.78 | |
| cd08577 | 228 | PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic | 95.71 | |
| cd08620 | 281 | PI-PLCXDc_like_1 Catalytic domain of uncharacteriz | 95.62 | |
| cd08619 | 285 | PI-PLCXDc_plant Catalytic domain of phosphatidylin | 95.48 | |
| cd08567 | 263 | GDPD_SpGDE_like Glycerophosphodiester phosphodiest | 95.43 | |
| PF00792 | 142 | PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I | 95.27 | |
| cd08565 | 235 | GDPD_pAtGDE_like Glycerophosphodiester phosphodies | 95.05 | |
| cd08566 | 240 | GDPD_AtGDE_like Glycerophosphodiester phosphodiest | 94.97 | |
| cd08573 | 258 | GDPD_GDE1 Glycerophosphodiester phosphodiesterase | 94.7 | |
| cd08564 | 265 | GDPD_GsGDE_like Glycerophosphodiester phosphodiest | 94.58 | |
| cd08568 | 226 | GDPD_TmGDE_like Glycerophosphodiester phosphodiest | 94.53 | |
| KOG2060 | 405 | consensus Rab3 effector RIM1 and related proteins, | 94.34 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 94.27 | |
| cd08584 | 192 | PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic | 93.81 | |
| cd08575 | 264 | GDPD_GDE4_like Glycerophosphodiester phosphodieste | 93.59 | |
| cd08561 | 249 | GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste | 93.28 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 92.92 | |
| KOG3837 | 523 | consensus Uncharacterized conserved protein, conta | 92.8 | |
| cd08574 | 252 | GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste | 92.57 | |
| cd08601 | 256 | GDPD_SaGlpQ_like Glycerophosphodiester phosphodies | 92.21 | |
| PRK11143 | 355 | glpQ glycerophosphodiester phosphodiesterase; Prov | 91.91 | |
| cd08580 | 263 | GDPD_Rv2277c_like Glycerophosphodiester phosphodie | 91.81 | |
| cd08581 | 229 | GDPD_like_1 Glycerophosphodiester phosphodiesteras | 91.68 | |
| cd08612 | 300 | GDPD_GDE4 Glycerophosphodiester phosphodiesterase | 91.64 | |
| cd08600 | 318 | GDPD_EcGlpQ_like Glycerophosphodiester phosphodies | 91.64 | |
| cd08695 | 189 | C2_Dock-B C2 domains found in Dedicator Of CytoKin | 91.59 | |
| cd08694 | 196 | C2_Dock-A C2 domains found in Dedicator Of CytoKin | 91.42 | |
| cd08607 | 290 | GDPD_GDE5 Glycerophosphodiester phosphodiesterase | 91.32 | |
| cd08571 | 302 | GDPD_SHV3_plant Glycerophosphodiester phosphodiest | 90.75 | |
| cd08605 | 282 | GDPD_GDE5_like_1_plant Glycerophosphodiester phosp | 90.65 | |
| cd08559 | 296 | GDPD_periplasmic_GlpQ_like Periplasmic glycerophos | 90.59 | |
| cd08609 | 315 | GDPD_GDE3 Glycerophosphodiester phosphodiesterase | 90.35 | |
| cd08606 | 286 | GDPD_YPL110cp_fungi Glycerophosphodiester phosphod | 90.05 | |
| cd08570 | 234 | GDPD_YPL206cp_fungi Glycerophosphodiester phosphod | 89.66 | |
| PTZ00268 | 380 | glycosylphosphatidylinositol-specific phospholipas | 89.51 | |
| cd08602 | 309 | GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie | 89.47 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 89.35 | |
| PRK09454 | 249 | ugpQ cytoplasmic glycerophosphodiester phosphodies | 89.23 | |
| smart00142 | 100 | PI3K_C2 Phosphoinositide 3-kinase, region postulat | 89.1 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 88.47 | |
| cd08583 | 237 | PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic | 88.24 | |
| PF14429 | 184 | DOCK-C2: C2 domain in Dock180 and Zizimin proteins | 88.09 | |
| cd08604 | 300 | GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi | 87.89 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 87.67 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 87.55 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 87.52 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 87.14 | |
| PF15627 | 156 | CEP76-C2: CEP76 C2 domain | 86.83 | |
| cd08572 | 293 | GDPD_GDE5_like Glycerophosphodiester phosphodieste | 86.73 | |
| cd08679 | 178 | C2_DOCK180_related C2 domains found in Dedicator O | 86.72 | |
| PF10358 | 143 | NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; | 86.66 | |
| cd08610 | 316 | GDPD_GDE6 Glycerophosphodiester phosphodiesterase | 86.36 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 86.26 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 84.78 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 83.4 | |
| cd08578 | 300 | GDPD_NUC-2_fungi Putative glycerophosphodiester ph | 83.31 | |
| COG0584 | 257 | UgpQ Glycerophosphoryl diester phosphodiesterase [ | 83.09 | |
| cd08560 | 356 | GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi | 82.39 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 82.38 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 82.19 | |
| cd08585 | 237 | GDPD_like_3 Glycerophosphodiester phosphodiesteras | 81.97 | |
| cd08613 | 309 | GDPD_GDE4_like_1 Glycerophosphodiester phosphodies | 81.77 | |
| cd08608 | 351 | GDPD_GDE2 Glycerophosphodiester phosphodiesterase | 80.97 | |
| KOG2258 | 341 | consensus Glycerophosphoryl diester phosphodiester | 80.59 |
| >PLN02222 phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-165 Score=1350.78 Aligned_cols=580 Identities=73% Similarity=1.247 Sum_probs=502.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhc
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (591)
|++++||||+||.|+|+......|+||..||.+|++++.|+.++|.+||+++|++..++.++|.+||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8999999999999999999999999999999999977899999999999999999888999999999998632 23
Q ss_pred cCCCCHHHHHHHhccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecC
Q 007734 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (591)
Q Consensus 81 ~~~l~~~~F~~~l~s~~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (591)
++.|+++||++||+|++|.++. +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4679999999999999999985 367999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 007734 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (591)
Q Consensus 161 ~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lP 239 (591)
+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 007734 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (591)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (591)
||++||||||||+|++++.++.... .....+....++..++.+.++........++.+..+.+ .+++++...+..
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDD----EVVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGDD-DDDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCccccccccc----cccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 9999999999999998765443210 00011111122233444444332221111110000000 011111222333
Q ss_pred cccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCc
Q 007734 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (591)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~ 399 (591)
....++++.|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 44578899999999999888877777666777889999999999999999999999999999999999999999999999
Q ss_pred ccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccCcCCC
Q 007734 400 IGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479 (591)
Q Consensus 400 ~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~ 479 (591)
.||++|||||||||||+|++||||+|||+.||+|||||||++||+....+..|+|....|++.+|+|+|++|++|+++.+
T Consensus 390 ~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~ 469 (581)
T PLN02222 390 VGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469 (581)
T ss_pred hHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCC
Confidence 99999999999999999999999999999999999999999999876544579999888888899999999999876655
Q ss_pred CCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEEC
Q 007734 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 559 (591)
Q Consensus 480 ~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL 559 (591)
+.+.+.++++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||
T Consensus 470 ~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~~lPv 549 (581)
T PLN02222 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPV 549 (581)
T ss_pred ccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEEEcch
Confidence 55566778899999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred CccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 560 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 560 ~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 550 ~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 550 WELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred hhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 99999999999999999999999999999984
|
|
| >PLN02230 phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-165 Score=1350.11 Aligned_cols=584 Identities=58% Similarity=1.004 Sum_probs=499.0
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhc-hhhh
Q 007734 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (591)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (591)
|||||||+||.|+|+.....+|+||.+||.+|+++ ..||+++|.+||+++|++. ..+.+.|.+||++|++..+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 67999999999999999999999999999999876 9999999999999999654 4578999999999985432 2233
Q ss_pred ccCCCCHHHHHHHhccCC-CCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 007734 80 QRRGLNLEAFFKYLFGDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (591)
Q Consensus 80 ~~~~l~~~~F~~~l~s~~-n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (591)
.++.|+++||++||+|.+ |.+. +..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 456799999999999854 4443 3579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 007734 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (591)
Q Consensus 159 dg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~l 238 (591)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667899
Q ss_pred CChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCC-CCC-CCCCCC--CCcc
Q 007734 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD-DFD-GGVDND--EEDS 314 (591)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~--~~~~ 314 (591)
|||++||||||||+|++++.++.+...+. +.......++++.|+.+.+.+.......+... ..+ .+..++ .+..
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK--DNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc--cccccccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998766554321110 00011112223334433322221111000000 000 000000 0001
Q ss_pred ccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCC
Q 007734 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (591)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (591)
..++...++++|++|++|+.+++++++..+++..+.+++|+||||.++.++++.++.+|++||++||+||||+|+|+|||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223356899999999999999999988888778888999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEecccc
Q 007734 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (591)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L 474 (591)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|+|....+++.+|+|+|++|++|
T Consensus 402 NynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~ 481 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGW 481 (598)
T ss_pred CCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCc
Confidence 99999999999999999999999999999999999999999999999999766556799988777788999999999999
Q ss_pred CcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEE
Q 007734 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 475 ~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
++++++++.+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|+|.+..||+|+|||.|+|+|..++++|+||
T Consensus 482 ~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiGQ 561 (598)
T PLN02230 482 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQ 561 (598)
T ss_pred cCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEEE
Confidence 87666666677889999999999999999999999988888999999999999999999999999999998788999999
Q ss_pred EEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 555 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 555 ~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+++||++|++|||||||+|+.|+++.+++|||||+|.
T Consensus 562 ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 562 TCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 9999999999999999999999999999999999985
|
|
| >PLN02228 Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-161 Score=1311.18 Aligned_cols=559 Identities=56% Similarity=0.970 Sum_probs=485.7
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccC
Q 007734 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (591)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (591)
+++|+||+||.|+|+.....+|+||..||.+|++++.|+.++|.+||+++|++...+.+.|.+||++|+..... ..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF--HHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh--cccC
Confidence 68999999999999999999999999999999987889999999999999999888899999999999853211 1235
Q ss_pred CCCHHHHHHHhccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC
Q 007734 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (591)
Q Consensus 83 ~l~~~~F~~~l~s~~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (591)
.|+++||++||+|.+|.++.++..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999999987667899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 007734 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (591)
Q Consensus 163 ~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~ 242 (591)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 77899999999999999999999999999999999999999999999999999999999999999998766678999999
Q ss_pred hccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007734 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (591)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (591)
+||||||||+|+++...+.+... +. ..++.++..+.. . .+.. +...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~-------------~~~~----~~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-V-------------ADAE----NKILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-c-------------ccch----hhccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 0 0000 00000 00111235
Q ss_pred chhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccc
Q 007734 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (591)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (591)
.++|++|++++..+.++++.......|...+++||||+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999999887776666554445556679999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccCcCCCCCc
Q 007734 403 SHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTH 482 (591)
Q Consensus 403 ~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~~~~ 482 (591)
++|||||||||||+|++||||+|||+.||+|||||||++||+.. ..|+|....|++.+|+|+||+|++|+.++...+
T Consensus 375 ~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~ 451 (567)
T PLN02228 375 THGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTH 451 (567)
T ss_pred cCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEEEECCccCCCCCCCC
Confidence 99999999999999999999999999999999999999999853 479998888877889999999999865544444
Q ss_pred cCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCcc-CcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCc
Q 007734 483 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 483 ~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
.+.++++||||+|++.|.|.|..++||+++.||+||+| ||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||++
T Consensus 452 ~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq~~lPv~~ 531 (567)
T PLN02228 452 FDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPE 531 (567)
T ss_pred CCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEEEEcchhH
Confidence 55667899999999999999999999999999999999 99999999999999999999999977779999999999999
Q ss_pred cCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 562 LKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 562 L~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|++|||||||+|..|+++.+|+|||||+|.
T Consensus 532 Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 532 LKSGVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred hhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 999999999999999999999999999973
|
|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-160 Score=1305.99 Aligned_cols=558 Identities=48% Similarity=0.749 Sum_probs=486.7
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhh
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (591)
+.+|+||+|+|++++|.-. ++.||||.++|.+|+.+ ++|+.++|.+||+.+|++..++.+.|++||++|+..++ ..
T Consensus 182 ~~~~~~k~~~~~~~~~~~~-~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--~~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRKE-LTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--FR 258 (746)
T ss_pred HhhccceehHHHHHHHHHh-hccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh--cc
Confidence 4689999999999999666 45566999999999987 99999999999999999999999999999999996554 12
Q ss_pred ccCCCCHHHHHHHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 007734 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (591)
Q Consensus 80 ~~~~l~~~~F~~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (591)
..+.|+++||++||+|.++.+++| |..|+|||+||||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 345699999999999999999976 6789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 007734 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (591)
Q Consensus 159 dg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~ 237 (591)
||++ ++|+|||||||||+|+|++||+|||+|||++|+|||||||||||+++||++||++|++||||+||.++.+ ..+.
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998865 5899
Q ss_pred CCChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 007734 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (591)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (591)
||||++||||||||+||+++.+.... .+.++.....++++.+...+.+ .+......+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~---------------------~~~~~~~~~d~~~~~e~s~e~~--~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADS---------------------KEPSSFEVTDEDEDKESSTEND--KSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccc---------------------cccccccccccccccccccccc--ccccccccc
Confidence 99999999999999999876554311 0000000000000000000000 000011122
Q ss_pred cccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCC
Q 007734 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (591)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~ 397 (591)
....++++|++||.|+.+++++++...++.+ .+++++||||+++.++++..+.+|+.||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2336789999999999999999888887764 678899999999999999999999999999999999999999999999
Q ss_pred CcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCC-CCCceeEEEEEEeccccCc
Q 007734 398 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LPAKKTLKVTVYMGEGWYY 476 (591)
Q Consensus 398 P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~~L~V~Visa~~L~~ 476 (591)
|+.||++|||||||||||+|++||||+|||+.||||||||||.+||+. +..|+|... .|++.+|+|+|++|++|+.
T Consensus 554 Pq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~---~~~F~P~~~~~~~~~tL~IkI~sGq~~~~ 630 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDS---GSTFDPKSNLPPVKKTLKIKIISGQGWLP 630 (746)
T ss_pred hHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCC---CCccCCCCCCCCCCceeEEEEEecCcccC
Confidence 999999999999999999999999999999999999999999999994 348999666 4455589999999999976
Q ss_pred CCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEE
Q 007734 477 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 555 (591)
Q Consensus 477 ~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 555 (591)
++..+.. ....||||.|+|.|+|.|+.+.+|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++|||+||+
T Consensus 631 ~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~ddF~GQ~ 708 (746)
T KOG0169|consen 631 DFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDDFIGQT 708 (746)
T ss_pred CCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCccccccee
Confidence 5544432 356799999999999999999999977665 9999999999999999999999999999999999999999
Q ss_pred EEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 556 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 556 ~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|+||++|++|||||||+|..|+.+..|+|||||+|.
T Consensus 709 tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 709 TLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred eccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 999999999999999999999999999999999873
|
|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-159 Score=1302.26 Aligned_cols=580 Identities=63% Similarity=1.092 Sum_probs=492.6
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhh-chhh
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNI 78 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~ 78 (591)
|...+|++|.||.|+++...+++|+||..||.+|+++ +.||.++|.+||+++|++..++.++|.+||++|.... +...
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 3455899999999999999999999999999999977 8999999999999999998889999999999886332 2223
Q ss_pred hccCCCCHHHHHHHhccC-CCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEe
Q 007734 79 FQRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157 (591)
Q Consensus 79 ~~~~~l~~~~F~~~l~s~-~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~ 157 (591)
+.+..|+++||++||+|. .|.+.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 94 ~~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred ccccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 445679999999999974 555554 57999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 007734 158 WPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237 (591)
Q Consensus 158 Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~ 237 (591)
|||+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.|+.+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCChhhccccEEEecCCCCchhhhhhhhh-hh--ccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcc
Q 007734 238 FPSPESLKRRIIISTKPPKEYLEAKEEKE-KE--NDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS 314 (591)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (591)
||||++||||||||+|+++..++.+.... +. .........++++ .+...+..... +.+.+.. .+....
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~--~~~~~~ 322 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLF----EQEADSR--SDSDQD 322 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---ccccccccccc----ccccccc--ccccch
Confidence 99999999999999999876654431100 00 0000000000000 00000000000 0000000 000001
Q ss_pred ccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCC
Q 007734 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (591)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (591)
+.+......+++++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSs 402 (599)
T PLN02952 323 DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSS 402 (599)
T ss_pred hhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCC
Confidence 11223345688999999999998887777666556667889999999999999999999999999999999999999999
Q ss_pred CCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEecccc
Q 007734 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (591)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L 474 (591)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||...+.+..|+|....|++++|+|+||+|++|
T Consensus 403 Ny~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l 482 (599)
T PLN02952 403 NYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGW 482 (599)
T ss_pred CCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECccc
Confidence 99999999999999999999999999999999999999999999999998655456799998888888999999999999
Q ss_pred CcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEE
Q 007734 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 475 ~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
+++....+.+.++++||||+|++.|.|.|..++||+++.||+||+|||+|.|.+..||+|+|+|.|+|+|..+.++|+||
T Consensus 483 ~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiGq 562 (599)
T PLN02952 483 RLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQ 562 (599)
T ss_pred CCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEEE
Confidence 87554455677788999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 555 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 555 ~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 563 ~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 563 TCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 9999999999999999999999999999999999984
|
|
| >PLN02223 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-151 Score=1218.73 Aligned_cols=523 Identities=42% Similarity=0.764 Sum_probs=448.0
Q ss_pred eeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHhhhhc-hhhh-ccCC
Q 007734 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (591)
Q Consensus 10 ~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (591)
+.|.|+|+.+.+.+++||..+|.+|+++ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ ...+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 4689999999999999999999999876 999999999999 99999999999999999999874432 2333 2367
Q ss_pred CCHHHHHHHhccCC-CCCCCCCCCc-ccCCCCcccceeeeccCcccccCCCCCCC-CChHHHHHHHhCCCcEEEEEeecC
Q 007734 84 LNLEAFFKYLFGDI-NPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (591)
Q Consensus 84 l~~~~F~~~l~s~~-n~~~~~~~~v-~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (591)
|+++||++||+|.+ |.+.. ..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 99999999999854 55443 356 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhccccC-CCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 007734 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (591)
Q Consensus 161 ~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~l 238 (591)
++ ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 67899999999999999999999999999998 9999999999999999999999999999999999764 557899
Q ss_pred CChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 007734 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (591)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (591)
|||++||||||||+|++++.++++. ++ +. . . .++ + .+..+
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~----------~~~-~----~~~~~----- 277 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-G----------VRN-E----LEIQE----- 277 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-c----------ccc-c----ccccc-----
Confidence 9999999999999999865433210 00 00 0 0 000 0 00000
Q ss_pred ccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhh--hcchhHHHhhccceeEEecCCCC-CCCCC
Q 007734 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG--TYGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (591)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~--~~~~~~~~~~~~~l~RvYP~g~R-i~SSN 395 (591)
....++|..++.++..++++.+. +++|.++.++.+ .++.++++||++||+||||+|+| +||||
T Consensus 278 -~~~~~~y~~li~~~~~~~~~~~~-------------~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 278 -GPADKNYQSLVGFHAVEPRGMLQ-------------KALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred -cccccceeeeeeeeccccccchh-------------hhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 12246788999998887654332 334444444433 24678999999999999999999 59999
Q ss_pred CCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccC
Q 007734 396 YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 475 (591)
Q Consensus 396 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 475 (591)
|||+.+|++|||||||||||+|++||||+|||+.||+|||||||++||+.++.+ .|+|....+.+.+|+|+||+|++|+
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~-~FdP~~~~~~~~~L~V~Visgq~~~ 422 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWI 422 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCccc-ccCCCCCcccceEEEEEEEEccccc
Confidence 999999999999999999999999999999999999999999999999876543 7999765556788999999999997
Q ss_pred cCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEE
Q 007734 476 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 555 (591)
Q Consensus 476 ~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 555 (591)
.+++++. +..+++||||+|+|.|.|.|+.++||++..|++||+|||+|+|.+.+||+|+|+|.|+|+|..+.++|+||+
T Consensus 423 ~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~ 501 (537)
T PLN02223 423 VDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQT 501 (537)
T ss_pred CCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEE
Confidence 5443332 445789999999999999999989998777779999999999999999999999999999988889999999
Q ss_pred EEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 556 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 556 ~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++||++|++|||+|||+|+.|+++..++|||||+|.
T Consensus 502 ~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 502 CLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred ecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 999999999999999999999999999999999984
|
|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-141 Score=1152.29 Aligned_cols=552 Identities=31% Similarity=0.470 Sum_probs=441.9
Q ss_pred cCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHH
Q 007734 19 AASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEA 88 (591)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~ 88 (591)
..+|.|+||..||.+++++ .+||+++|.+||++.|+++. ++..++..||++|++... ...++.|+.+|
T Consensus 215 ~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~--~a~~gqms~dg 292 (1189)
T KOG1265|consen 215 NKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSD--NAEKGQMSTDG 292 (1189)
T ss_pred HhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchh--hhhccccchhh
Confidence 5679999999999999976 89999999999999999975 456899999999995432 12467899999
Q ss_pred HHHHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCC-CCc
Q 007734 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNV 166 (591)
Q Consensus 89 F~~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~p 166 (591)
|.+||++++|.++.+ ....++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+. +||
T Consensus 293 f~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EP 372 (1189)
T KOG1265|consen 293 FVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEEP 372 (1189)
T ss_pred hHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCCc
Confidence 999999999999864 356899999999999999999999999999999999999999999999999999999543 469
Q ss_pred eEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCCh
Q 007734 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSP 241 (591)
Q Consensus 167 iv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP 241 (591)
||+||.|+|+.|.|+|||+||+++||+||+||||||+|||||+.||.+||+||++||||+|++.|.+ +...||||
T Consensus 373 vITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPsP 452 (1189)
T KOG1265|consen 373 VITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPSP 452 (1189)
T ss_pred eeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999996533 34789999
Q ss_pred hhccccEEEecCCCCchh-hhhh-hhhhhcccc-CCCCC----Cccc---ccC-----CC----CCCccccCCCCCC---
Q 007734 242 ESLKRRIIISTKPPKEYL-EAKE-EKEKENDSQ-RGKGS----ADEE---AWG-----KE----VPNLKSLNNSACD--- 299 (591)
Q Consensus 242 ~~Lk~KIlik~K~~~~~~-~~~~-~~~~~~~~~-~~~~~----~~~~---~~~-----~~----~~~~~~~~~~~~~--- 299 (591)
++||+|||||+||..-.. +... ...+..+.+ .+..+ .++. ..| .+ -+.+......++.
T Consensus 453 ~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~~ 532 (1189)
T KOG1265|consen 453 EDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAHP 532 (1189)
T ss_pred HHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccch
Confidence 999999999999753110 0000 000000000 00000 0000 000 00 0001111111000
Q ss_pred CCCCCCCCCCCCCc--------cccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcch
Q 007734 300 KDDFDGGVDNDEED--------SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGN 371 (591)
Q Consensus 300 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~ 371 (591)
+.+++....+...+ ........+++++|+||.|.....+.+|.-+-+ ...++.|+||+|+++..++++++-
T Consensus 533 E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~i 611 (1189)
T KOG1265|consen 533 ELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSPI 611 (1189)
T ss_pred hhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCch
Confidence 00000000000000 000111235678999998754444444543333 346789999999999999999999
Q ss_pred hHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCc
Q 007734 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEV 451 (591)
Q Consensus 372 ~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~ 451 (591)
+||+||+++|+||||+|+|||||||+||.|||+|||||||||||+|.+||||.|||..||+|||+|||+|||++. +.
T Consensus 612 efV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r~ 688 (1189)
T KOG1265|consen 612 EFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---RQ 688 (1189)
T ss_pred HHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---cC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999974 68
Q ss_pred cCCCCCCCC----ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCcee--eeccccCCC-CCCccCc-E
Q 007734 452 FDPKVKLPA----KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTKTLEDN-WIPSWNE-E 523 (591)
Q Consensus 452 f~p~~~~p~----~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k--~kTkvi~nn-~NPvWNE-t 523 (591)
|||....|+ ..++.|+||||+-|.. .....||+|.+.|+|.|..+ +||+++.+| +||+|+| .
T Consensus 689 fdPFse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eep 758 (1189)
T KOG1265|consen 689 FDPFSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEP 758 (1189)
T ss_pred cCCcccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCC
Confidence 999987664 4679999999997732 12346999999999999764 589998876 9999985 5
Q ss_pred EEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 524 FEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 524 f~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|. |..|++|+|||.||++. ..||||..+||+.|+.|||||.|++..|+++..++|||.|+.
T Consensus 759 fvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 759 FVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred cccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 9995 88999999999999975 679999999999999999999999999999999999999975
|
|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-131 Score=1060.57 Aligned_cols=536 Identities=31% Similarity=0.500 Sum_probs=415.6
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCCCCCCCCC-CCcccC-CCCc
Q 007734 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (591)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~n~~~~~~-~~v~qd-M~~P 114 (591)
.+.+..+|++||..+|++.+++. ..+++++.+|-+. ...-.+.+.|++++|..||+|..|++++++ ..|..| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 57889999999999999988755 3456666666532 222234678999999999999999999876 457665 9999
Q ss_pred ccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhcccc
Q 007734 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (591)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~ 194 (591)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+|+ .|+||||||+||||.|.|||++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999985 799999999999999999999999999999
Q ss_pred CCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhh-hhhhhcc--
Q 007734 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKE-EKEKEND-- 270 (591)
Q Consensus 195 S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~-~~~~~~~-- 270 (591)
|+||||||||.|||++||+.||+.+++||||+|++.|.+ +...||||.|||+|||||+||.....+-.. ..+.+++
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999997754 478999999999999999998754211100 0000000
Q ss_pred --------------------------------------ccCCC--------CCCcc----ccc--C----CC-C------
Q 007734 271 --------------------------------------SQRGK--------GSADE----EAW--G----KE-V------ 287 (591)
Q Consensus 271 --------------------------------------~~~~~--------~~~~~----~~~--~----~~-~------ 287 (591)
.+... ..++| +.| | .. .
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 00000 00010 001 0 00 0
Q ss_pred ---------------------CC--cc----c-------cCCCCCCC----------------------------C----
Q 007734 288 ---------------------PN--LK----S-------LNNSACDK----------------------------D---- 301 (591)
Q Consensus 288 ---------------------~~--~~----~-------~~~~~~~~----------------------------~---- 301 (591)
.+ ++ . ....++.+ .
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 00 00 0 00000000 0
Q ss_pred ---C--CC---CCC---------------------CC---------CCC-------------------------------
Q 007734 302 ---D--FD---GGV---------------------DN---------DEE------------------------------- 312 (591)
Q Consensus 302 ---~--~~---~~~---------------------~~---------~~~------------------------------- 312 (591)
+ +. .++ .+ +..
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 0 00 000 00 000
Q ss_pred --------------------------------------------------------cccc--------------------
Q 007734 313 --------------------------------------------------------DSDD-------------------- 316 (591)
Q Consensus 313 --------------------------------------------------------~~~~-------------------- 316 (591)
..++
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 0000
Q ss_pred ----------------------------------------------------------------------------c---
Q 007734 317 ----------------------------------------------------------------------------K--- 317 (591)
Q Consensus 317 ----------------------------------------------------------------------------~--- 317 (591)
+
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 0
Q ss_pred ---------------------------------------------------cccccchhhccceEeecccccCCcccccc
Q 007734 318 ---------------------------------------------------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 318 ---------------------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
...+++.|+++||+|+...|+.. .+ +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~-~~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTK-DN-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcc-cc-c-
Confidence 00112334445555554444210 00 0
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.++....|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||+++|++|||||||||||.|.+||+|+|+
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNqa~ 1030 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQAL 1030 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhHHH
Confidence 01223357899999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCceeeeecCCcccCCCCCCCccCCCCC-CC---CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC
Q 007734 427 FRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LP---AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA 502 (591)
Q Consensus 427 F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p---~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~ 502 (591)
|..||+|||||||.+||.. .|||... .. .+.+|.|+||.|+.|+.. ..+..-|||+|+|.|.+.
T Consensus 1031 F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevEiiGa~~ 1098 (1267)
T KOG1264|consen 1031 FSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVEIIGAEY 1098 (1267)
T ss_pred hhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEEEecccc
Confidence 9999999999999999974 5888754 11 135699999999988631 124456899999999999
Q ss_pred CceeeeccccC-CCCCCccC-cEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCccc
Q 007734 503 DTVMKKTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 580 (591)
Q Consensus 503 d~~k~kTkvi~-nn~NPvWN-Etf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~ 580 (591)
|..+++|++|. |++||+|| |+|+|.|.+|+.|+|||.|+|+|+.+...||||+++||.+|+.|||.|||+|...+.++
T Consensus 1099 Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ySEdlE 1178 (1267)
T KOG1264|consen 1099 DTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNGYSEDLE 1178 (1267)
T ss_pred CCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccCchhhhh
Confidence 99988877655 55999999 99999999999999999999999999889999999999999999999999999999999
Q ss_pred CeEEEEEEEE
Q 007734 581 SVKLLMHFEF 590 (591)
Q Consensus 581 ~asLlv~i~f 590 (591)
.|+|||.++.
T Consensus 1179 LaSLLv~i~m 1188 (1267)
T KOG1264|consen 1179 LASLLVFIEM 1188 (1267)
T ss_pred hhhheeeeEe
Confidence 9999999985
|
|
| >cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-110 Score=826.68 Aligned_cols=257 Identities=36% Similarity=0.562 Sum_probs=236.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999999752
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+.+++++|+.+..++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1345677777766666666665544
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.++..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 254 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGC 254 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhch
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 255 F~~N 258 (258)
T cd08629 255 FQDN 258 (258)
T ss_pred hcCC
Confidence 9987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain |
| >cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-109 Score=816.40 Aligned_cols=252 Identities=37% Similarity=0.564 Sum_probs=223.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls----- 154 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALS----- 154 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhh-----
Confidence 999999999999999999999999999999999999999998652 3457899999999999999998532211
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+|+.+..+..+.++....
T Consensus 155 --------------------------------------------------------------~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 155 --------------------------------------------------------------DLVKYTKSVRVHDIETEA 172 (254)
T ss_pred --------------------------------------------------------------HHhhhcccCCcCcccccc
Confidence 111111111111111110
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g 249 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRA 249 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcc
Confidence 12468899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 250 ~F~~N 254 (254)
T cd08633 250 KFSAN 254 (254)
T ss_pred cccCC
Confidence 99987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-108 Score=820.18 Aligned_cols=256 Identities=34% Similarity=0.594 Sum_probs=236.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999999752
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+.++|++|+.++.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246688888887776666666543
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G 253 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAG 253 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcc
Confidence 11 23458899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08630 254 RFLVN 258 (258)
T ss_pred cccCC
Confidence 99987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh |
| >cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-108 Score=818.72 Aligned_cols=254 Identities=33% Similarity=0.527 Sum_probs=224.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977432 37899999999999999997421
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
+++|+.+..+..+.+
T Consensus 158 -----------------------------------------------------------------ls~lv~y~~~~kf~~ 172 (261)
T cd08624 158 -----------------------------------------------------------------MSSLVNYIQPTKFVS 172 (261)
T ss_pred -----------------------------------------------------------------chhhhcccCCcCCCC
Confidence 222233332222233
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|
T Consensus 173 f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M 251 (261)
T cd08624 173 FEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPM 251 (261)
T ss_pred cccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhh
Confidence 33222211 23568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 252 ~LN~G~F~~n 261 (261)
T cd08624 252 QQNMALFEFN 261 (261)
T ss_pred hhhcccccCC
Confidence 9999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-108 Score=812.36 Aligned_cols=251 Identities=33% Similarity=0.560 Sum_probs=221.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.|+ .+....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 99999999999999999999999999999999999999998765 2346789999999999999999853211
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
++|+.+..+..+.++.+.
T Consensus 154 -------------------------------------------------------------s~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 154 -------------------------------------------------------------SDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred -------------------------------------------------------------HhhhhhccCcccccchhc-
Confidence 111111111111111110
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g 248 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRA 248 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcc
Confidence 11257899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 249 ~F~~n 253 (253)
T cd08632 249 KFMVN 253 (253)
T ss_pred cccCC
Confidence 99987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-108 Score=816.38 Aligned_cols=255 Identities=35% Similarity=0.548 Sum_probs=227.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||+|||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998620
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
++++++|+.+..+..+.++....
T Consensus 151 ---------------------------------------------------------~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 151 ---------------------------------------------------------AKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred ---------------------------------------------------------ChhHHHHhhhcCCcCCCCccccc
Confidence 12344555444333222333221
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G 252 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNG 252 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcC
Confidence 11 12357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 253 ~F~~N 257 (257)
T cd08595 253 KFLDN 257 (257)
T ss_pred cccCC
Confidence 99987
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) |
| >cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-108 Score=816.74 Aligned_cols=256 Identities=34% Similarity=0.585 Sum_probs=229.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999751
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+.+++++|+.+..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 124455665554444333333221
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
. ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~-~~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 253 (258)
T cd08631 175 E-HYHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDG 253 (258)
T ss_pred c-cCccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcc
Confidence 1 112357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08631 254 LFRQN 258 (258)
T ss_pred hhcCC
Confidence 99987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which |
| >cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-108 Score=812.13 Aligned_cols=248 Identities=36% Similarity=0.563 Sum_probs=224.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccccEEEecCCCCchhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (591)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998652 1 24689999999999999999732
Q ss_pred hhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEe-ecccccCCc
Q 007734 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAI-HAGKPKGGL 341 (591)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 341 (591)
++++|+.+ ++.+++ ++
T Consensus 154 --------------------------------------------------------------els~l~~y~~~~k~~-~~ 170 (254)
T cd08596 154 --------------------------------------------------------------ELSDLVIYCQAVKFP-GL 170 (254)
T ss_pred --------------------------------------------------------------HHHHHHHHhcCccCC-CC
Confidence 13333333 233332 33
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
. .+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||
T Consensus 171 ~-----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 245 (254)
T cd08596 171 S-----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMH 245 (254)
T ss_pred C-----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHH
Confidence 2 13357889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 246 LN~G~F~~N 254 (254)
T cd08596 246 LNAAMFEAN 254 (254)
T ss_pred hhhchhcCC
Confidence 999999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core |
| >cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-107 Score=810.89 Aligned_cols=251 Identities=34% Similarity=0.541 Sum_probs=220.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhhh
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (591)
|++|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L--- 157 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSL--- 157 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhh---
Confidence 999999999999999999999999999999999999999999976432 468999999999999999973110
Q ss_pred hhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCc
Q 007734 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (591)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (591)
+.+..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~~~~~ 169 (257)
T cd08626 158 --------------------------------------------------------------------VNYAQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hcccccCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
....+.. ..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~~-~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08626 170 DVAEERN-IHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQ 248 (257)
T ss_pred CchhhcC-CCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHH
Confidence 1111111 135789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 249 LN~G~F~~n 257 (257)
T cd08626 249 LNQGKFEYN 257 (257)
T ss_pred hhhccccCC
Confidence 999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-107 Score=809.05 Aligned_cols=251 Identities=33% Similarity=0.526 Sum_probs=221.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~tlts~i~f~dvi~a 186 (591)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||+|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~--- 157 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSN--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhc---
Confidence 999999999999999999999 59999999999999999999997743 246899999999999999997311
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
|+.|..+..+.+
T Consensus 158 --------------------------------------------------------------------Lv~y~~~v~f~~ 169 (258)
T cd08623 158 --------------------------------------------------------------------LVNYIQPVKFES 169 (258)
T ss_pred --------------------------------------------------------------------ccccccCcccCC
Confidence 111111111122
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+..... ....++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++|
T Consensus 170 f~~~~~-~~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M 248 (258)
T cd08623 170 FEASKK-RNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSM 248 (258)
T ss_pred cccccc-cCCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcch
Confidence 222111 1123578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 249 ~LN~G~F~~~ 258 (258)
T cd08623 249 QINMGMYEYN 258 (258)
T ss_pred hhhcccccCC
Confidence 9999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-107 Score=806.45 Aligned_cols=251 Identities=36% Similarity=0.548 Sum_probs=221.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~piv~HG~tlts~i~f~dvi~a 186 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhhh
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (591)
||+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L--- 157 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSL--- 157 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhh---
Confidence 999999999999999999999999999999999999999999987432 368999999999999999973210
Q ss_pred hhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCc
Q 007734 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (591)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (591)
+++..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~f~~~ 169 (257)
T cd08591 158 --------------------------------------------------------------------VNYIQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hccccCCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQ 248 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHH
Confidence 111111 1235789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 249 lN~g~F~~N 257 (257)
T cd08591 249 LNQGKFEYN 257 (257)
T ss_pred hhcccccCC
Confidence 999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod |
| >cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-107 Score=809.79 Aligned_cols=256 Identities=38% Similarity=0.607 Sum_probs=231.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||+|||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35799999999999999999751
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+.+++++|+.+..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1244566665543333444544332
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~ 253 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGL 253 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhch
Confidence 2345689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 254 F~~N 257 (257)
T cd08593 254 FRQN 257 (257)
T ss_pred hcCC
Confidence 9987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is |
| >cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-107 Score=809.61 Aligned_cols=251 Identities=33% Similarity=0.514 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~tlts~i~f~dvi~a 186 (591)
.|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ +++|+||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999953 468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||+|||++|+||||||||||| |.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd--- 157 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc---
Confidence 999999999999999999999 69999999999999999999997744 246899999999999999997421
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
|+.|..+..+.+
T Consensus 158 --------------------------------------------------------------------Lvvy~~~vkf~~ 169 (258)
T cd08625 158 --------------------------------------------------------------------LVNYIEPVKFKS 169 (258)
T ss_pred --------------------------------------------------------------------ccceecccccCC
Confidence 111111111122
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+.+.... ...++|+||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++|
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M 248 (258)
T cd08625 170 FEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAM 248 (258)
T ss_pred chhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcch
Confidence 2222111 124578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 249 ~LN~G~F~~n 258 (258)
T cd08625 249 QLNMGVFEYN 258 (258)
T ss_pred hhhcccccCC
Confidence 9999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-106 Score=785.19 Aligned_cols=225 Identities=41% Similarity=0.659 Sum_probs=215.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999751
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g 222 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRA 222 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcc
Confidence 25689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 223 ~F~~N 227 (227)
T cd08594 223 KFRAN 227 (227)
T ss_pred cccCC
Confidence 99987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, |
| >cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-106 Score=800.16 Aligned_cols=253 Identities=36% Similarity=0.603 Sum_probs=226.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 479999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 346799999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
++++++|+.|..+..+. .. .+.
T Consensus 150 --------------------------------------------------------~~eLs~l~~y~~~~~~~-~~-~~~ 171 (254)
T cd08628 150 --------------------------------------------------------AIELSDLVVYCKPTSKT-KD-NLE 171 (254)
T ss_pred --------------------------------------------------------CHHHHhhHhhhcccccc-cC-Ccc
Confidence 24455666655433211 01 011
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
++...+++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 172 -~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~ 250 (254)
T cd08628 172 -NPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHAL 250 (254)
T ss_pred -cccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhh
Confidence 1234478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 251 F~~n 254 (254)
T cd08628 251 FSLN 254 (254)
T ss_pred ccCC
Confidence 9987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-104 Score=790.39 Aligned_cols=259 Identities=35% Similarity=0.563 Sum_probs=233.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++..
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~~-------- 151 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKRR-------- 151 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCcc--------
Confidence 999999999999999999999999999999999999999999774 34679999999999999999975210
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
++.+++++|+.|..+..+.++.....
T Consensus 152 ------------------------------------------------------~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 152 ------------------------------------------------------KLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred ------------------------------------------------------cccHHHHhhhhhhcCcccCCcccccc
Confidence 12456777777655443334433211
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
....++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~ 256 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGK 256 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhccc
Confidence 2234678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 257 F~~N 260 (260)
T cd08597 257 FLEN 260 (260)
T ss_pred ccCC
Confidence 9987
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment |
| >cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-103 Score=769.43 Aligned_cols=225 Identities=42% Similarity=0.697 Sum_probs=216.3
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 48999999999999999761
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+||
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~ 222 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGK 222 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhccc
Confidence 256899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 223 F~~n 226 (226)
T cd08558 223 FEQN 226 (226)
T ss_pred ccCC
Confidence 9976
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki |
| >cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-103 Score=768.42 Aligned_cols=229 Identities=38% Similarity=0.648 Sum_probs=215.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999975 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999998850 0
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 227 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAM 227 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhccc
Confidence 01257899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eee
Q 007734 427 FRA 429 (591)
Q Consensus 427 F~~ 429 (591)
|+.
T Consensus 228 F~~ 230 (231)
T cd08598 228 FAG 230 (231)
T ss_pred ccC
Confidence 985
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro |
| >cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-103 Score=762.20 Aligned_cols=226 Identities=38% Similarity=0.656 Sum_probs=211.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.+||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I 79 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTI 79 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------- 149 (229)
T cd08627 80 KEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------- 149 (229)
T ss_pred HHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------
Confidence 9999999999999999999999999999999999999999997644 46789999999999999998620
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
.
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (229)
T cd08627 150 ---------------------------------------------------------R---------------------- 150 (229)
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred cCCCceeEeecCHHHHHHHhh-hcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 151 ------~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G 224 (229)
T cd08627 151 ------DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQA 224 (229)
T ss_pred ------ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcC
Confidence 135788899988875 3568999999999999999999999999999999999999999999999999999999
Q ss_pred eeee
Q 007734 426 MFRA 429 (591)
Q Consensus 426 ~F~~ 429 (591)
||..
T Consensus 225 ~F~~ 228 (229)
T cd08627 225 LFML 228 (229)
T ss_pred cccC
Confidence 9974
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-101 Score=757.72 Aligned_cols=227 Identities=39% Similarity=0.675 Sum_probs=214.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
++|||++|+|||||||||||+.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987643 4678999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHh-hhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g 224 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQA 224 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcc
Confidence 0235789999999998 47899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 225 ~F~~N 229 (229)
T cd08592 225 LFMLN 229 (229)
T ss_pred cccCC
Confidence 99987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl |
| >cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-101 Score=752.90 Aligned_cols=226 Identities=62% Similarity=1.059 Sum_probs=215.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999997731
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHhh-hcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.+++||+|+++.++.+ .++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 223 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRG 223 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcc
Confidence 2467999999999996 8899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 224 ~F~~N 228 (228)
T cd08599 224 KFRAN 228 (228)
T ss_pred cccCC
Confidence 99987
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi |
| >cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-63 Score=508.62 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=211.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999875 579999999999 999999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccccEEEecCCCCchhh
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||++|+++||++++||||||||+||+. +||.+||++|+++||++|+.|+.+....+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521100
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
. ..+...|. .+
T Consensus 159 ~---------------~~~~~~~~------------------------------------------------------~~ 169 (274)
T cd00137 159 T---------------GSSNDTGF------------------------------------------------------VS 169 (274)
T ss_pred c---------------ccccccCc------------------------------------------------------CC
Confidence 0 00000000 00
Q ss_pred cccccccCCCceeEeecCHHHHHH----HhhhcchhHHHhhccceeEEecCCCC---------CCCCCCCCcccccc---
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------i~SSN~~P~~~W~~--- 404 (591)
+..... .....+++|++|.++.. +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 01123567888888854 33445667899999999999999999 99999999999999
Q ss_pred cceeeeeccCCCCcceeeeeeeeeec
Q 007734 405 GAQMVAFNMQGHGRSLWLMHGMFRAN 430 (591)
Q Consensus 405 G~QmVALN~QT~D~~m~lN~g~F~~N 430 (591)
|||||||||||.|++|+||+|+|+.|
T Consensus 249 g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 249 GCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred CceEEEeeCcCCCccHHHHhhhhccC
Confidence 99999999999999999999999987
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a |
| >smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=325.11 Aligned_cols=115 Identities=45% Similarity=0.730 Sum_probs=105.3
Q ss_pred ccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccc
Q 007734 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (591)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~ 406 (591)
++||+|+.++++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47889988887777766554322 56899999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccCCCCcceeeeeeeeeecCceeeeecCCcc
Q 007734 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 442 (591)
Q Consensus 407 QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~l 442 (591)
|||||||||+|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=330.34 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=89.9
Q ss_pred hhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccc
Q 007734 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (591)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~ 404 (591)
||++|++|..+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 58899988777665555442222 22578899999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeccCCCCcceeeeeeeeeecCceeeeecCCccc
Q 007734 405 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL 443 (591)
Q Consensus 405 G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr 443 (591)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
|
1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=305.30 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.1
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~ 188 (591)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 4699999999999999999999999
Q ss_pred hhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 007734 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (591)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~ 243 (591)
++||..+.|||||+||+||+.++|.+||++|+++||++|+.|+.+ ..+.+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=287.72 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.9
Q ss_pred CCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh
Q 007734 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (591)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~ 190 (591)
|+.|+|||||++||||||+++|+.|++....|.++|..||||+|||||++++ +++.|+||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 359999999999999999999999999
Q ss_pred ccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccccEEEecCC
Q 007734 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (591)
Q Consensus 191 AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (591)
+|..+.+||||+|++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 468999999999999999875
|
1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B .... |
| >cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.3e-22 Score=203.11 Aligned_cols=146 Identities=25% Similarity=0.421 Sum_probs=127.7
Q ss_pred cCCCCcccceeeeccCcccccC------------CCC--CCCCChHHHHHHHhCCCcEEEEEeecCCC------------
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~------------ 162 (591)
.+.+.||+||++-.|||+|..| +|+ ....+-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 34455567899999999999999996543
Q ss_pred -------CCCceEeeCCcc---cccchHHHHHHHHhhhccc-cCCCceEEeeccCCCH------------HHHHHHHHHH
Q 007734 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (591)
Q Consensus 163 -------~~~piv~HG~tl---ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~ma~~l 219 (591)
++..-|+|+.++ |+..+|.+||..||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345689999998 8999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CC------CCCCCChhhccccEEEecCC
Q 007734 220 TQTLGE-ILFTPGS-----EC------LKEFPSPESLKRRIIISTKP 254 (591)
Q Consensus 220 ~~~~Gd-~L~~~~~-----~~------~~~lPSP~~Lk~KIlik~K~ 254 (591)
+++||+ +|++|+. .. ...+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 22 26899999999999999775
|
This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy |
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.7e-19 Score=160.22 Aligned_cols=125 Identities=43% Similarity=0.657 Sum_probs=109.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC-CceeeeccccCCCC-CCccCcEEEEeeecCCccEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~-d~~k~kTkvi~nn~-NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
..|+|+|++|++|+.. .....+..||||+|++.+.+. +..+.||+++.++. ||+|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 4699999999999642 111346789999999988665 56778999988775 99999999999998888899999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|||.+.. ++++||++.++++.|..||++++|+++.|++...++|+|++++.
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999877 79999999999999999999999999999988899999999974
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking |
| >cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-18 Score=176.19 Aligned_cols=143 Identities=22% Similarity=0.374 Sum_probs=121.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC----------CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc-
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts- 176 (591)
..||+.||++|+|-.|||+|..+..-. +....-.+.+.|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 468999999999999999999876532 233344578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC----CCCCCCChhhcc-
Q 007734 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE----CLKEFPSPESLK- 245 (591)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~----~~~~lPSP~~Lk- 245 (591)
...|++|++.|+++++....++|||.||+|++..++..+.++|+++||++||.|+.. .....|+.++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998632 146789999996
Q ss_pred -ccEEEec
Q 007734 246 -RRIIIST 252 (591)
Q Consensus 246 -~KIlik~ 252 (591)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7776653
|
This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity. |
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=149.23 Aligned_cols=104 Identities=26% Similarity=0.368 Sum_probs=85.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEecc--CCCceeeeccccCCCCCCccCcEEEEeeec---CCccEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGV--PADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 537 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~--p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~Lr 537 (591)
+|+|+|++|++|+. .+ .+.+||||+|++.|. +....++||+++.+++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~------~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKW------QT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCc------cc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 48999999999964 12 277899999999873 233345789999999999999999999974 3457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
|.|+|+|..+++++||++++||+++..+- .|+||..
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~~ 112 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLGR 112 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECcC
Confidence 99999998778999999999999998764 5778843
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-16 Score=141.17 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=94.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-----CCccEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 538 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-----pela~Lrf 538 (591)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 4799999999963 23456789999999853 57799999999999999999999876 34578999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC--Cc---ceEEEccCCCCCcc-cCeEEEEEEE
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 589 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~--~G---yR~vpL~d~~g~~~-~~asLlv~i~ 589 (591)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..++.- ..+.|.|+|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 45 47999987776533 4578888774
|
Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member |
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.5e-16 Score=139.03 Aligned_cols=113 Identities=29% Similarity=0.410 Sum_probs=93.0
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 7899999999964 2335678999999986532 3567999999999999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.. ++++||++.+||+.|..|.+ +++|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998864 6677643 24678888776
|
A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o |
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-15 Score=136.23 Aligned_cols=116 Identities=24% Similarity=0.370 Sum_probs=95.8
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ...+||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 48999999999963 24456789999999864 34679999999999999999999986553 679999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++..+++++||++.+||..+..| ..+++|.++.+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 99888899999999999999855 3589999887743 35688888775
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein |
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=138.27 Aligned_cols=103 Identities=27% Similarity=0.392 Sum_probs=85.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ec--CCccEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~--pela~Lrf 538 (591)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 469999999999964 23 4678999999998766666788999999999999999999987 32 23468999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||+|..+++++||++.+||+.+..+- .|.+|
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L 121 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLSQETEKWYPL 121 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccCCCccceEEC
Confidence 9999998888999999999999997553 35554
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut |
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-15 Score=135.85 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
++|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 57899999999954 5679999876 69999999999998654 35699999
Q ss_pred EeccCCCCCCccEEEEEECC-ccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~-sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..++|++||.+.+||. .+.+|. .|.+|...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999888999999999995 687774 68999988887644 577776653
|
Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian |
| >cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.3e-16 Score=158.76 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=125.2
Q ss_pred CCCCcccceeeeccCcccccCCCCC-------CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 110 DMTAPVSHYFIYTGHNSYLTGNQLN-------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 110 dM~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
+.+.||+++.|-.|||+|..+.... +.+.-..+...|..|+|++|||||..++++++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5788999999999999999887642 334445678999999999999999875446789999988887899999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-ccEEEecCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (591)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999999999999999998875 89999999999999999875 3346889999999 999998654
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X |
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-15 Score=140.40 Aligned_cols=117 Identities=21% Similarity=0.338 Sum_probs=96.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.|+|+|+.|++|+. .+.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 38999999999964 24457899999999964 5778999877 599999999999987665678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------ceEEEccCCCC-----Cc-ccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-------yR~vpL~d~~g-----~~-~~~asLlv~i~f 590 (591)
|++..+++++||++.+||+.+..| -+|+||.+..| ++ ...+.|.|+|.|
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 999877899999999999998654 58999998765 22 345788888876
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd08677 C2A_Synaptotagmin-13 C2 domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-15 Score=136.53 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=81.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4569999999999851 244799999998642 22357799999999999999999999887665 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCcc--CCcceE
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRA 568 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL--~~GyR~ 568 (591)
+|||+|..+++++||++.+|++++ ..|.+|
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~ 114 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQ 114 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccc
Confidence 999999999999999999999975 566654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain |
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.6e-15 Score=132.02 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=98.6
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 58999999999964 23456789999999864 357999999999999999999997542 3579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++..+++++||++.+|+..+..|. +|.+|.++.+.....++|.+.++||
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998774 6889998877766788999999986
|
MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran |
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-15 Score=135.66 Aligned_cols=113 Identities=24% Similarity=0.322 Sum_probs=89.9
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++++.- ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|.|||+
T Consensus 2 L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEEC
Confidence 89999999994210 1135567899999999743 5779999999999999999999987654 4799999999
Q ss_pred cCCC------CCCccEEEEEECCccCCcc---eEEEccCCCCCcc-cCeEEE
Q 007734 544 DMSE------KDDFGGQTCLPVSELKQGI---RAVPLHDRKGERY-KSVKLL 585 (591)
Q Consensus 544 d~~~------~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~-~~asLl 585 (591)
+..+ ++++||++.+||+.+..|. +++||.+.+++.. ..+.|-
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 8763 7999999999999999885 4899997765543 444553
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.1e-15 Score=135.46 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=92.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 539 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~ 539 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 48999999999964 23346789999999865 5679999999999999999999987543 2579999
Q ss_pred EEeccCCC-CCCccEEEEEECCccC-Cc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~-~dd~lGq~~ipL~sL~-~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|||.+... +++|||++.+|++.+. .| .+|.+|..+.......+.|.+++.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99988765 7999999999999986 44 5788997643222345688888775
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.4e-15 Score=138.80 Aligned_cols=125 Identities=25% Similarity=0.382 Sum_probs=100.0
Q ss_pred ceeEEEEEEeccccCcCCCC----------------C--------ccCCCCCCCceEEEEEeccCCCceeeeccccCCCC
Q 007734 461 KKTLKVTVYMGEGWYYDFPH----------------T--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 516 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~----------------~--------~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~ 516 (591)
.++|.|+|+.|++|+..... . .....+.+||||+|.+.+ ....||++++++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~----~~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAG----ARVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECC----eEeeEEEEeCCCC
Confidence 35799999999999741100 0 002346689999999865 2346999999999
Q ss_pred CCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCccc-CeEEEEEEEEC
Q 007734 517 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 591 (591)
Q Consensus 517 NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~-~asLlv~i~f~ 591 (591)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++.. ++.|.|++.|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999765 689999999999998775 68999999999875 48999999985
|
PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic |
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.5e-15 Score=135.12 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=85.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+.. . ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999641 1 12367899999999654333456799999999999999999999875544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~ 572 (591)
.|||+|..+++++||++.++|+++... -.|+||.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 999999888899999999999998543 4688873
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2 |
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-15 Score=139.37 Aligned_cols=112 Identities=19% Similarity=0.174 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~ 87 (136)
T cd08406 14 AERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRV 87 (136)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEE
Confidence 3469999999999964 234567899999999865544457799999999999999999999875544 67999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceE-EEccCCCCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER 578 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~-vpL~d~~g~~ 578 (591)
+|+|+|..+++++||++.|+..+..+|++| ..+++.-+++
T Consensus 88 ~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~ 128 (136)
T cd08406 88 TVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKP 128 (136)
T ss_pred EEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCe
Confidence 999999888899999999998888778765 3555544554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl |
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.2e-15 Score=138.07 Aligned_cols=108 Identities=23% Similarity=0.276 Sum_probs=88.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-----------C
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 531 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-----------p 531 (591)
+|.|+|+.|++|+. ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+.. +
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999953 2356899999999876555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc----ceEEEccCCCCCc
Q 007734 532 --E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 578 (591)
Q Consensus 532 --e--la~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G----yR~vpL~d~~g~~ 578 (591)
+ ...|.|.|||.+..++++|||++.|||..|..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 357999999999877899999999999999876 3688997765554
|
RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.2e-15 Score=134.15 Aligned_cols=104 Identities=19% Similarity=0.241 Sum_probs=84.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+.. +.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAA------ADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCC------cCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 469999999999964 1222 56899999999765554567899999999999999999999865443 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL 571 (591)
.|||+|..+++++||++.+||..+..+ -.|.+|
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L 124 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWSNTQPTWYPL 124 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccCCCCcceEEC
Confidence 999999888899999999999998654 246665
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety |
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-14 Score=135.65 Aligned_cols=108 Identities=21% Similarity=0.223 Sum_probs=87.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4599999999999531 12346789999999986544445889999999999999999999997 45568999999
Q ss_pred -eccCCCCCCccEEEEEECCccCCcc---eEEEccCCC
Q 007734 542 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 575 (591)
Q Consensus 542 -D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~ 575 (591)
|++...++++||++.|+|+.+..+. .|.+|.++.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 5777778999999999999996553 678888643
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.2e-15 Score=134.03 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=85.8
Q ss_pred eeEEEEEEeccccCcCCCCCccCC-CCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~-~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~------~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAY------GDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCc------cCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 569999999999964 122 267899999999866555668899999999999999999999866544 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc------ceEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G------yR~vpL 571 (591)
.|||.+..+++++||++.|||+.+.-. .+|.||
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~~~~~~~~~~W~~l 127 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDFEDTDSQRFLWYPL 127 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCcccCCCCccccceEEC
Confidence 999999888899999999999988532 467776
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids |
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=132.68 Aligned_cols=122 Identities=25% Similarity=0.370 Sum_probs=96.1
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccC-C-CceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p-~-d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999964 2345678999999998642 1 22356899999999999999999998643 45789999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---------ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQG---------IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~G---------yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
||++..+++++||++.++++++..+ -.|.+|....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 9999888899999999999998643 26788876544434567999999874
|
Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.8e-15 Score=130.57 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=85.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.|+|+|++|++|+. .+.. +.+||||+|.+.+.. ....||++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPK------ADFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 68999999999964 2334 678999999986532 34679999999999999999999887653 358999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~ 572 (591)
.|||+|..+++++||++.++++.|.+--+|.||+
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998777888875
|
C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan |
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.2e-14 Score=127.15 Aligned_cols=110 Identities=24% Similarity=0.364 Sum_probs=90.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||++.+.+ .+.||++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPP------MDDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCC------CCCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 23346789999999853 568999999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+..+++++||++.++|+.+..+- .|++|.+. .+.|++++.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987653 46788754 2567777665
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei |
| >cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=128.83 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=79.0
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V~ 541 (591)
.|.|+|++|++|+... ........+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~--~~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLK--NMTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCcc--ccCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 5899999999996411 0011123579999999742 56799999999999999999999876554 47999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998776
|
PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM |
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=128.51 Aligned_cols=113 Identities=27% Similarity=0.324 Sum_probs=91.2
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|.||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 59999999999964 24457789999999864 4678988755 689999999999998766678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|++..+ +++||++.++++.+..| -.|.+|.+ .|+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 998766 89999999999987554 46788875 343 34688888775
|
Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr |
| >cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=133.36 Aligned_cols=113 Identities=13% Similarity=0.204 Sum_probs=87.5
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCC-CCccCcEEEEeeecCCcc-EEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELA-LLR 537 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~-NPvWNEtf~F~v~~pela-~Lr 537 (591)
....|+|+|+.|++|+. .+..+.+||||+|.+.+.+.+..++||++++++. ||+|||+|.|+|..++.. .|.
T Consensus 12 ~~~rLtV~VikarnL~~------~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l~ 85 (135)
T cd08692 12 VNSRIQLQILEAQNLPS------SSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQFL 85 (135)
T ss_pred cCCeEEEEEEEccCCCc------ccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEEE
Confidence 44569999999999964 1223456999999999888887889999999995 699999999999876553 678
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC-CcceE-EEccCCCCCc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK-QGIRA-VPLHDRKGER 578 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~-~GyR~-vpL~d~~g~~ 578 (591)
+.|||+|..+++++||++.++.++.. .|.+| -.+++.-+++
T Consensus 86 v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 86 IKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 88999988788999999999998753 34443 3444433333
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho |
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-14 Score=128.70 Aligned_cols=110 Identities=29% Similarity=0.411 Sum_probs=92.5
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 88999999999531 579999999853 467999999999999999999998766667899999999
Q ss_pred cCCCCCCccEEEEEECCccCC--------cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~--------GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.. ++++||++.++|+.+.. ..+|.+|.+..+.. ..+.|.+.|.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 866 68999999999999854 24899999887743 34688888887
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.9e-14 Score=127.89 Aligned_cols=115 Identities=19% Similarity=0.275 Sum_probs=92.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||+|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 3599999999999631 2479999999954 234688874 5799999999999977666667889999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc---eEEEccCCCC-CcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g-~~~~~asLlv~i~f 590 (591)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~ 122 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARY 122 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEE
Confidence 9998888999999999999998886 5889976543 22345688888877
|
RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki |
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.55 E-value=4e-14 Score=128.02 Aligned_cols=105 Identities=24% Similarity=0.338 Sum_probs=83.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-C--CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-p--ela~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|+
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 4569999999999954 233467899999999765555567899999999999999999998643 2 236899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC--CcceEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~--~GyR~vpL 571 (591)
|.|||++..+++++||++.++|+... .+-.|.+|
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 23456666
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.8e-14 Score=126.89 Aligned_cols=116 Identities=24% Similarity=0.319 Sum_probs=92.7
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+. ..+.+||||.+.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999852 346789999999852 1246799999999999999999999853 346799999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCC-cccCeEEEEEEEEC
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGE-RYKSVKLLMHFEFI 591 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~-~~~~asLlv~i~f~ 591 (591)
+..+++++||++.++++.|..+ -.++||....++ .-..++|.+.+.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 9888899999999999998754 356788765443 23457999998874
|
The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a |
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.1e-14 Score=129.64 Aligned_cols=114 Identities=25% Similarity=0.394 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+....|.|.|
T Consensus 14 ~G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V 82 (136)
T cd08375 14 IGRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITV 82 (136)
T ss_pred cEEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEE
Confidence 3679999999999953 24457899999999742 578999999999999999999999877678899999
Q ss_pred EeccCCCCCCccEEEEEECCccCC------c--ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~------G--yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..+++++||++.++|.++.. + +++++|. +. ..+.+.+.+.|
T Consensus 83 ~D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~---~~--~~g~i~l~~~~ 135 (136)
T cd08375 83 FDRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH---EV--PTGEVVVKLDL 135 (136)
T ss_pred EECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc---cc--cceeEEEEEEe
Confidence 999988889999999999999864 2 2455653 22 23456666554
|
A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro |
| >cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-14 Score=133.80 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=88.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+.. ..+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 35699999999999641 1112233799999999865444457899999999999999999999876554 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceE-EEccCCCCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER 578 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~-vpL~d~~g~~ 578 (591)
+|+|+|..+++++||++.+++.+-.++.+| -.+++.-+++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~ 130 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQ 130 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCc
Confidence 999999999999999999999875555543 3555544444
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy |
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-14 Score=129.44 Aligned_cols=96 Identities=21% Similarity=0.353 Sum_probs=80.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~L~V~V~~arnL~~------~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~~ 87 (124)
T cd08680 14 SSLVISVEQLRNLSA------LSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQV 87 (124)
T ss_pred CEEEEEEeEecCCcc------cccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEEE
Confidence 469999999999964 133456899999999754432 357899999999999999999999876655 48999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.||+.+..+++++||++.|+|+.+.
T Consensus 88 ~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 88 DVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEeCCCCCceeEEEEEEEEhhhcc
Confidence 9999998888999999999999884
|
Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom |
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.5e-14 Score=124.35 Aligned_cols=96 Identities=27% Similarity=0.362 Sum_probs=82.2
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 8899999999964 23346789999999975 678899999999999999999999988888999999998
Q ss_pred cCCCCCCccEEEEEECCccCCc-----ceEEEccC
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 573 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d 573 (591)
+. +++||++.++|..|..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999998643 36788865
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-14 Score=124.65 Aligned_cols=111 Identities=29% Similarity=0.458 Sum_probs=90.9
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++++. .+..+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~------~~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPS------ADRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCC------CCCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 5799999999864 12346689999999865 3457899999999999999999998765567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 586 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv 586 (591)
+..+++++||++.+++..+..| .++++|....|.. .+.||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998766654 345664
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.7e-14 Score=125.53 Aligned_cols=114 Identities=25% Similarity=0.318 Sum_probs=89.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d~ 70 (123)
T cd04025 2 LRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWDW 70 (123)
T ss_pred EEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEEC
Confidence 8999999999853 23345789999999854 467899999999999999999998876667899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCc----ccCeEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF 588 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~----~~~asLlv~i 588 (591)
+..+++++||++.++|..+..+ ..|..|.....+. -..++|.+.|
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 71 DLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 9888899999999999998654 4577777533221 1235666654
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a |
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-14 Score=133.02 Aligned_cols=113 Identities=20% Similarity=0.179 Sum_probs=91.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 244577899999999754333456799999999999999999999865443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.+++.+...|.+ |..|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 99999988889999999999999666665 456777777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s |
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.53 E-value=1e-13 Score=126.16 Aligned_cols=109 Identities=27% Similarity=0.382 Sum_probs=91.6
Q ss_pred EEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccC
Q 007734 468 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 545 (591)
Q Consensus 468 Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~ 545 (591)
|++|++|+. ..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888842 346789999999865 467999999999999999999998654 45789999999998
Q ss_pred CCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 546 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 546 ~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
.+++++||++.++|+.+..+. .++||.+..+.++. +.|.+.+.|
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~ 115 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSY 115 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEE
Confidence 888999999999999988664 47899998888765 688888876
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-14 Score=127.13 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=83.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 3569999999999964 23346789999999864 33457799999999999999999999875544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||+|..+++++||++.+||+.+..|. .|.+|
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~~~W~~l 122 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGHVTEEWRDL 122 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCCCcceEEEc
Confidence 9999998888999999999999986653 45554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and |
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.7e-14 Score=125.33 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=83.7
Q ss_pred EEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCcc-CcEEEEeeecCCc--cEEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pel--a~Lrf~ 539 (591)
|+|+|++|++|+. .+ ..+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPV------MDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCc------cccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 6799999999964 12 236689999999854 6789999999999999 9999999876654 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCC---cc---eEEEccCC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDR 574 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~---Gy---R~vpL~d~ 574 (591)
|||++..+++++||++.++|..|.. +. +|.+|+|.
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~~ 110 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYDT 110 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEcccC
Confidence 9999988889999999999999865 33 58888873
|
The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a |
| >KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-14 Score=133.33 Aligned_cols=92 Identities=28% Similarity=0.440 Sum_probs=80.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|+.|.+|.. .|..+.+||||.+++.+ ++.||+++.+|+||+|||+|.|.+..+ ...|++.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 469999999999853 34447789999999875 688999999999999999999999887 456999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|+|..+++||+|.|+|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
|
|
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.1e-14 Score=127.15 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=80.4
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 469999999999963 13 467899999999876555567899999999999999999999865443 4688999
Q ss_pred EeccCCC-CCCccEEEEEECCccCCcc
Q 007734 541 HEYDMSE-KDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 541 ~D~d~~~-~dd~lGq~~ipL~sL~~Gy 566 (591)
||.+... ++++||.+.||+.++..|-
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~ 111 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQK 111 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence 9988654 4689999999999986553
|
This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho |
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=125.26 Aligned_cols=113 Identities=20% Similarity=0.359 Sum_probs=90.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999953 24467899999999864 356799999999999999999999854 56899999999
Q ss_pred cCCCC--CCccEEEEEECCccCC----cceEEEccCCCCC--cccCeEEEEEE
Q 007734 544 DMSEK--DDFGGQTCLPVSELKQ----GIRAVPLHDRKGE--RYKSVKLLMHF 588 (591)
Q Consensus 544 d~~~~--dd~lGq~~ipL~sL~~----GyR~vpL~d~~g~--~~~~asLlv~i 588 (591)
+..++ +++||++.++++.|.. +..|+||.+.... ....++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87654 4799999999999742 3679999776653 23356788775
|
A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are |
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-13 Score=125.56 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=84.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+. |....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i 86 (124)
T cd08387 15 MGILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEV 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEE
Confidence 3569999999999963 2345678999999984 333456899999999999999999999875543 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~ 572 (591)
.|||++..+++++||++.++|+.+..|- .|.+|.
T Consensus 87 ~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~l~ 123 (124)
T cd08387 87 LLYDFDQFSRDECIGVVELPLAEVDLSEKLDLWRKIQ 123 (124)
T ss_pred EEEECCCCCCCceeEEEEEecccccCCCCcceEEECc
Confidence 9999998888999999999999997553 455654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv |
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=125.69 Aligned_cols=105 Identities=28% Similarity=0.352 Sum_probs=84.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPP------CDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCC------ccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 3569999999999964 234567899999999765444567899999999999999999999865443 57999
Q ss_pred EEEeccCC--CCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMS--EKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~--~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||.+.. +++++||++.++|..|..+. +|.+|
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 126 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLSKGFTQWYDL 126 (127)
T ss_pred EEEECCcccCCCCceEEEEEEecccccccCCccceEEC
Confidence 99998864 57899999999999986543 45555
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1 |
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-14 Score=131.41 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 234567899999999754444456789999999999999999999875554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||++..+++++||++.+++.+...++. |.+|+...++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 99999988889999999999998876664 567776666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: |
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=123.83 Aligned_cols=117 Identities=22% Similarity=0.315 Sum_probs=94.4
Q ss_pred eEEEEEEeccccCcCCCCCccCC--CCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~--~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.|+|+|++|++|+. .+. .+.+||||.|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAA------KDRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 58999999999964 133 56789999998743 568999999999999999999999875567899999
Q ss_pred EeccCCCCCCccEEEEEECCccC----Cc--ceEEEccCCCCC--cccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~----~G--yR~vpL~d~~g~--~~~~asLlv~i~f 590 (591)
||++..+++++||++.++|..+. .| -.|++|.+.... ....++|.+++.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998778999999999999985 23 368899876332 2345788888865
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu |
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.51 E-value=9e-14 Score=130.61 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=83.2
Q ss_pred eEEEEEEeccccCcCCCCC--------ccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-
Q 007734 463 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~--------~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel- 533 (591)
.|.|+|+.|++|+...... -.+..+.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..++.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999997411000 001234689999999876 45689999999999999999999877665
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-c---------ceEEEccCC
Q 007734 534 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR 574 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~-G---------yR~vpL~d~ 574 (591)
..|.|+|||+|..+++++||++.++|..|.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998742 2 267777653
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=124.08 Aligned_cols=105 Identities=20% Similarity=0.292 Sum_probs=84.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35699999999999641 2 3457899999998754333356899999999999999999999875443 5799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc---ceEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL 571 (591)
|.|||++..+++++||++.++|+.+..| -.|.||
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l 123 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLDSQQSEWYPL 123 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEecccccccCCCccEEEC
Confidence 9999999888899999999999999654 346665
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into |
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-14 Score=129.66 Aligned_cols=113 Identities=18% Similarity=0.251 Sum_probs=89.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 4569999999999964 234567899999999764444456799999999999999999999876554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.+++.+..... .|..++...++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 9999998888999999999998753332 3556666555554
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai |
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=125.96 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=77.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEE-eeecCCc--cEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPEL--ALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F-~v~~pel--a~L 536 (591)
..+|+|+|++|++|+.. +.. +.+||||+|.+.+ .+..++||++++++.||+|||+|.| .+...++ ..|
T Consensus 15 ~~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L 86 (128)
T cd08388 15 KKALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSL 86 (128)
T ss_pred CCEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEE
Confidence 35699999999999641 222 6689999999863 3445679999999999999999999 3442222 469
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
+|.|||+|..+++++||++.+||+.+..
T Consensus 87 ~~~V~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 87 HFAVLSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEEcCCCCCCceeEEEEEeccccCC
Confidence 9999999988889999999999999843
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence |
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=125.27 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pela~Lrf~ 539 (591)
..+|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.. ..+....|+|+
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 4689999999999953 2346789999999865 378999999999999999999974 34456789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|||+|..+++++||++.++|.....+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999876544
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few |
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-13 Score=121.01 Aligned_cols=117 Identities=25% Similarity=0.321 Sum_probs=90.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+...........+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999996410000001135689999999864 57899999999999999999999876556789999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++.. ++++||++.++|+.+..+ -.|++|.+. ..+.|.++++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 799999999999998654 268899764 34567777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular |
| >cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.6e-14 Score=130.16 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=87.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 539 (591)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 244567999999998542222345789999999999999999999865555 369999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--ceEEEccCCCCCcc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY 579 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~G--yR~vpL~d~~g~~~ 579 (591)
|||+|..+++++||++.|...+.... -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555442 34567777777664
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta- |
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-13 Score=122.16 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=82.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC----ccEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe----la~L 536 (591)
...|+|+|+.|++|+ .+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+. .+.|
T Consensus 3 ~~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l 67 (111)
T cd04011 3 DFQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKII 67 (111)
T ss_pred cEEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeE
Confidence 356999999999984 24689999999975 4678999999999999999999986543 2579
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCCc------ceEEEccCC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDR 574 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~~G------yR~vpL~d~ 574 (591)
.|.|||.+..+++++||++.++|+.+..+ -+|+||.|+
T Consensus 68 ~i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 68 KISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999999877799999999999999655 257888764
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.9e-13 Score=121.91 Aligned_cols=113 Identities=20% Similarity=0.308 Sum_probs=87.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 58999999999964 234567899999986532 1345799999999999999999999877656789999999
Q ss_pred ccCCCCCCccEEEEEECCccCC---cc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~---Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++..+++++||++.++|+.+.. |. +|++|.. . +.+.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence 9988789999999999987542 32 5788853 3 355555544
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap |
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=121.45 Aligned_cols=117 Identities=18% Similarity=0.257 Sum_probs=89.0
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|+.|.+|+.. . ...+.+||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~----~-~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR----S-GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC----C-CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999641 1 1235689999998843 2457899999999999999999998643 36899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+..+++++||.+.++++.+..| -.|++|.-.....-..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEEC
Confidence 9888899999999999999754 3578886432211135677766653
|
RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p |
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.6e-13 Score=122.10 Aligned_cols=114 Identities=29% Similarity=0.407 Sum_probs=91.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 58999999999964 23456789999999843 467999999999999999999988654 3579999999
Q ss_pred ccCC-----------CCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEE
Q 007734 543 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 543 ~d~~-----------~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i 588 (591)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.+++
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 8842 46899999999999886554 6889987666655677888774
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev |
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.6e-13 Score=123.40 Aligned_cols=115 Identities=23% Similarity=0.425 Sum_probs=89.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-C--------Cc
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-p--------el 533 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999964 24457799999999864 57799999999999999999997532 1 12
Q ss_pred cEEEEEEEeccCCCCCCccEEEEE-ECCccCC------cceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 534 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ------GIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~dd~lGq~~i-pL~sL~~------GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
..|.|.|||+|..+++++||++.+ |+..++. --+|++|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 579999999998888999999986 6666642 237899973 343 356899998875
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=124.04 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=88.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCC----ccEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 537 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pe----la~Lr 537 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~------~~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKN------VNLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCC------CCcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 48999999999964 23356789999999875 34678998764 699999999999997764 47899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc--------eEEEccCCCCCccc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYK 580 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy--------R~vpL~d~~g~~~~ 580 (591)
|.|||++..+++++||++.+||..+..+. .+.+|.+++|++.+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 99999987677999999999999987554 45799988888754
|
SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such |
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.2e-14 Score=128.04 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=89.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 244577899999998653333456789999999999999999999764433 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||++..+++++||.+.+|+.....|+. |..|....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 99999988889999999999987777775 456666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind |
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.7e-13 Score=120.98 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.8
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|+.|++|+. .+..+.+||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 7899999999954 24456789999999854 2346999999999999999999998543 46899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc----ceEEEccCCCCCcccCeEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE 589 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G----yR~vpL~d~~g~~~~~asLlv~i~ 589 (591)
+..++++++|++.++++.+..+ -.|++|....+..-..+.|.+.+.
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999999887643 368999653322223456666553
|
Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. |
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-13 Score=125.06 Aligned_cols=96 Identities=26% Similarity=0.470 Sum_probs=79.8
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--CceeeeccccCCCCCCccCcEEEEeeecC----CccE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL 535 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--d~~k~kTkvi~nn~NPvWNEtf~F~v~~p----ela~ 535 (591)
..|+|+|++|++|+. .+..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~------~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLP------LDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 469999999999964 23446789999999875332 24578999999999999999999998642 2468
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccC
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s |
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.1e-14 Score=128.08 Aligned_cols=113 Identities=18% Similarity=0.176 Sum_probs=88.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--ccEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--la~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...+ ...|.|
T Consensus 14 ~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 3569999999999953 23456789999999864333334679999999999999999999976433 357999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
.|||.+..+++++||++.+++.+...+. .|..|+...++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 9999998888999999999999874443 4567777666664
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.3e-13 Score=121.48 Aligned_cols=103 Identities=21% Similarity=0.244 Sum_probs=82.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---ela~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..+.||++++++.||+|||+|.|.+... ....|.
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 3569999999999964 23446789999999853 334568999999999999999999975322 235799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
|.|||+|..+++++||++.++|+.+..|. +|..|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~l 123 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTEEQTFWKDL 123 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCCCCcceEEec
Confidence 99999998888999999999999987663 45555
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=118.22 Aligned_cols=114 Identities=21% Similarity=0.281 Sum_probs=89.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|+|+|++|++|.. .+.++.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 24467899999998764 467999999999999999999987654 457999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-ceEEEccC----CCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-yR~vpL~d----~~g~~~~~asLlv~i~f 590 (591)
|++... +++||.+.++++.+..+ +++++|.. .+|+. .++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~--~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEV--PGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCC--CCEEEEEEEE
Confidence 998764 89999999999987544 67889953 33333 3567776654
|
A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic |
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.8e-13 Score=120.87 Aligned_cols=116 Identities=24% Similarity=0.210 Sum_probs=88.6
Q ss_pred eeEEEEEEeccccCcCCCCCc--c--CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~--~--d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lr 537 (591)
+.|+|+|+.|++|........ . ...+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 469999999999953100000 0 0124689999999864 23468999999999999999999986 457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCC-----cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~-----GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|+|++..++++++|++.++|+.+.. +-.|++|. +.+.|.|++.+
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence 999998877788999999999999876 25788985 24577777765
|
A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >cd04048 C2A_Copine C2 domain first repeat in Copine | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=121.21 Aligned_cols=103 Identities=21% Similarity=0.248 Sum_probs=82.8
Q ss_pred EEeccccCcCCCCCccCCCCCCCceEEEEEeccC--CCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccC
Q 007734 468 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 545 (591)
Q Consensus 468 Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p--~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~ 545 (591)
.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888853 2445778999999998754 33446899999999999999999999776777889999999996
Q ss_pred ----CCCCCccEEEEEECCccCCc---ceEEEccCCCC
Q 007734 546 ----SEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 576 (591)
Q Consensus 546 ----~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g 576 (591)
.+++++||++.++++.|..+ ..+.+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 67899999999999999754 24667755444
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma |
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.1e-13 Score=120.55 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=83.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 35699999999999641 2 345689999999853 33456789999999999999999999876543 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEcc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~ 572 (591)
|.|||.+..+++++||++.++|+.+..+. .|+||-
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L~ 122 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDLE 122 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeCC
Confidence 99999998778899999999999987543 566763
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat |
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.9e-13 Score=121.54 Aligned_cols=102 Identities=22% Similarity=0.228 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCC--ccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pe--la~Lr 537 (591)
...|.|+|+.|++|+. .+..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|+
T Consensus 15 ~~~L~V~Vi~a~nL~~------~~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~ 85 (124)
T cd08389 15 ARKLTVTVIRAQDIPT------KDRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALR 85 (124)
T ss_pred CCEEEEEEEEecCCCc------hhcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEEE
Confidence 3569999999999964 13345679999987754 3346789999887 999999999998 54333 35799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
|.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 86 ~~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 86 FRLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 99999998888999999999999997652 46665
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.4e-14 Score=117.86 Aligned_cols=76 Identities=32% Similarity=0.552 Sum_probs=66.2
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCCCCCCCC
Q 007734 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP 103 (591)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~n~~~~~ 103 (591)
||..||.+|+++ ++||+++|++||+++|++..++.++|.+||++|+... ....+..||++||++||+|++|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~ 77 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDP 77 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-H
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCCh
Confidence 799999999986 9999999999999999998889999999999998432 123467899999999999999999986
|
It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Probab=99.44 E-value=7e-13 Score=121.21 Aligned_cols=108 Identities=29% Similarity=0.392 Sum_probs=88.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC-ccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe-la~Lrf~V 540 (591)
..|+|+|++|++|+.. +..+.+||||+|.+.+.+.+..++||++++++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 4699999999999641 2345689999999987666667889999999999999999999987553 35799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc--ceEEEccCCC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 575 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~G--yR~vpL~d~~ 575 (591)
||.+..+++++||++.++|+.+..+ -.|++|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9998777889999999999998643 4688987643
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd |
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-12 Score=121.57 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=88.8
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--------ccE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 535 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--------la~ 535 (591)
..++|..+.+++++ ..+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 45566666664321 123335579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEeccCC-CCCCccEEEEEECCccCCc--c-eEEEccCCCCCcccCeEEEEEEEE
Q 007734 536 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 536 Lrf~V~D~d~~-~~dd~lGq~~ipL~sL~~G--y-R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|.|||.+.. .+|++||++.++|+.|..+ . .+++|++ |...-++.|.|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 99999999864 4699999999999999544 3 4789985 555667889888753
|
Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha |
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.8e-13 Score=126.27 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=79.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC-Cc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p-el--a~Lr 537 (591)
.+.|.|+|++|.+|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~------~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPA------LKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCC------CCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 5679999999999964 2335778999999986544445678999999999999999999985432 22 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.|||++..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin |
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-13 Score=124.61 Aligned_cols=112 Identities=20% Similarity=0.179 Sum_probs=90.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--ccEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--la~Lrf~ 539 (591)
..|.|+|++|++|+. .+..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPP------SDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 569999999999964 23356789999999986544445779999999999999999999987654 3689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
|||.+..+++++||++.++++....+. .|.+|++..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 999987777999999999999943343 4678888777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin |
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.8e-13 Score=123.72 Aligned_cols=98 Identities=24% Similarity=0.304 Sum_probs=79.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~ 86 (137)
T cd08409 14 LNRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSL 86 (137)
T ss_pred CCeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEE
Confidence 3569999999999963 23 466899999999864333346799999999999999999999865444 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
.|||.+..+++++||++.++......|
T Consensus 87 ~V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 87 SVMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEEeCCCCCCcceEEEEEECCcccCCC
Confidence 999999888899999999997655544
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id |
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=117.50 Aligned_cols=119 Identities=22% Similarity=0.215 Sum_probs=92.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|++|++|+.. ....+.+||||+|.+.+. ....||+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~-----~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS-----DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc-----cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 3589999999999631 012245799999999752 35679999999999999999999987 44568999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEEC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|.+..+++++||++.++|..+..+.. +.......|++ .++|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 99987789999999999999976532 22333456665 46888888875
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=118.69 Aligned_cols=98 Identities=24% Similarity=0.365 Sum_probs=80.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pel--a~Lr 537 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|.. ...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 3569999999999963 2345678999999997655555678999999999999999999963 33333 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|.|||++.. ++++||++.++|+.|..+
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~ 114 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPN 114 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCC
Confidence 999999877 689999999999999766
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.7e-13 Score=122.22 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=87.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
..+|.|+|+.|.+|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 3569999999999964 244567899999999753222 246799999999999999999999875444 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc-c-eEEEccCCCCCcc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHDRKGERY 579 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G-y-R~vpL~d~~g~~~ 579 (591)
|.|||.+..+++++||++.+++.....+ . .|..+++..++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999888899999999999876543 2 3455555555543
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-12 Score=118.53 Aligned_cols=117 Identities=21% Similarity=0.287 Sum_probs=87.2
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--------CceeeeccccCCCCCCcc-CcEEEEeeecCCc
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--------d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pel 533 (591)
.++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36899999999942 3467899999999974322 235789999999999999 99999998543
Q ss_pred cEEEEEEEeccCCCC---CCccEEEEEECCccCCc------ceEEEccCCCCCcccCeEEEEEE
Q 007734 534 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~---dd~lGq~~ipL~sL~~G------yR~vpL~d~~g~~~~~asLlv~i 588 (591)
..|.|+|||++..++ +++||++.+||++|..| ..+.+|--......-.+.|-+++
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 479999999875433 69999999999999755 24567654444334445666554
|
NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C |
| >cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=118.56 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=77.7
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++...|.|+|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 244578899999998652 2346788888999999999999998878778999999999
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
|..+++++||++.++|+...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=120.70 Aligned_cols=91 Identities=30% Similarity=0.434 Sum_probs=77.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|++|.+|+. .+. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 469999999999963 133 5689999999853 578999999999999999999998776 567999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|++..++++++|++.+++..|..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999987554
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i |
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-12 Score=118.38 Aligned_cols=104 Identities=29% Similarity=0.348 Sum_probs=85.2
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC------------
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 531 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p------------ 531 (591)
|.|+|+.|++|+. . ..+.+||||+|.+.+ +....++||+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~------~-~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLAL------K-SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCc------c-cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 5799999999953 1 246789999999875 2445678999999999999999999998764
Q ss_pred ---CccEEEEEEEeccCCCCCCccEEEEEECCccCCc---ceEEEccCCC
Q 007734 532 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 575 (591)
Q Consensus 532 ---ela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~ 575 (591)
....|.|.|||.+..++++|||++.++|..+..+ ..|++|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 5788987654
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin |
| >cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-12 Score=114.46 Aligned_cols=92 Identities=26% Similarity=0.357 Sum_probs=72.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|.+|++|. +.+||||++.+.+......+.||++++++.||+|||+|.|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 679999999983 34799999988753332457899999999999999999999863 44899999998
Q ss_pred -------cCCCCCCccEEEEEECCc--cC-CcceE
Q 007734 544 -------DMSEKDDFGGQTCLPVSE--LK-QGIRA 568 (591)
Q Consensus 544 -------d~~~~dd~lGq~~ipL~s--L~-~GyR~ 568 (591)
|..+.++++|.+.+.|+- +. .|++.
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 455779999888887763 43 36654
|
The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr |
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.5e-12 Score=114.02 Aligned_cols=102 Identities=24% Similarity=0.356 Sum_probs=81.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++++. .+..+.+||||+|.+.+ ..+.+|+++.++.||+|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 58999999999854 23457889999999854 25678999999999999999999886653 579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc--eEEEccCCC
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDRK 575 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~Gy--R~vpL~d~~ 575 (591)
++..+++++||++.++|..+..+- .+.-|+|.+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~~~~~~~~~~~~~ 105 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKKNEDGKYVEYDDE 105 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCCCCCceEEecCCC
Confidence 998888999999999999987652 344444433
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.9e-12 Score=118.11 Aligned_cols=103 Identities=29% Similarity=0.403 Sum_probs=80.5
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC------------------------CceeeeccccCC
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLED 514 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~------------------------d~~k~kTkvi~n 514 (591)
|....|+|+|++|++|+. .+..+.+||||+|.+.+... ....++|+++.+
T Consensus 25 ~~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~ 98 (153)
T cd08676 25 PPIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQ 98 (153)
T ss_pred CCeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecC
Confidence 445789999999999853 24557799999998853211 012468999999
Q ss_pred CCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC-Cc-ceEEEc
Q 007734 515 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-QG-IRAVPL 571 (591)
Q Consensus 515 n~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~-~G-yR~vpL 571 (591)
+.||+|||+|.|.+..+....|.|.|||++ +++||++.++++.|. .| ..|.+|
T Consensus 99 tlnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~W~~L 153 (153)
T cd08676 99 TLNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDSWFKL 153 (153)
T ss_pred CCCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCCeEeC
Confidence 999999999999987655678999999987 789999999999987 23 245554
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy |
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-11 Score=114.89 Aligned_cols=114 Identities=18% Similarity=0.321 Sum_probs=92.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
...|.|.|+.|++||. ..+|||+|.+.+ ....||+++.++.||.|+|.|.|....+ ...|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 4569999999999964 136899999986 3446999999999999999999975433 45689999
Q ss_pred EeccC-CC---CCCccEEEEEECCccCCcc---eEEEccCCCCCc--------ccCeEEEEEEEE
Q 007734 541 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~-~~---~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~--------~~~asLlv~i~f 590 (591)
+..+. .+ ++++||.+.||+..+..|. +|.||.+.+|.+ -++++|-|++.|
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf 138 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARY 138 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEE
Confidence 65442 21 4789999999999999884 799999999996 566899999887
|
SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas |
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.9e-12 Score=113.53 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=75.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999953 23456789999999853 4568888875 799999999999998763 467999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
.|||.+..+++++||++.++|.++..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988789999999999999854
|
In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai |
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=112.09 Aligned_cols=114 Identities=22% Similarity=0.278 Sum_probs=85.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.+|.|+|++|+.+.. +..+.+||||+|.+.+. ...||+++.++.||+|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 358999999983321 22567899999998652 3679999999999999999999875 3468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------c-eEEEccCCCC-CcccCeEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRKG-ERYKSVKLLMHF 588 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-------y-R~vpL~d~~g-~~~~~asLlv~i 588 (591)
|++..+.+++||++.++|+.+..+ + -+++|..+.. .....+.|.+.+
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 999888899999999999998642 2 2677765441 223345676655
|
E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e |
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.4e-12 Score=112.91 Aligned_cols=94 Identities=21% Similarity=0.296 Sum_probs=76.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|+.|++++. + +..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.|.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 359999999999842 1 2348999999853 57789988775 999999999999765544 999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-----ceEEEcc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH 572 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~ 572 (591)
|+|.. .||++|++.|||+.+..+ -.|+||.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99965 699999999999998643 3577876
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=140.24 Aligned_cols=99 Identities=22% Similarity=0.448 Sum_probs=86.4
Q ss_pred CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 487 ~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
+.+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. ..|.|+|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4679999999943 34569999999999999999999998764 57999999999887 699999999999999995
Q ss_pred ---eEEEccCCCCCcccC-eEEEEEEEEC
Q 007734 567 ---RAVPLHDRKGERYKS-VKLLMHFEFI 591 (591)
Q Consensus 567 ---R~vpL~d~~g~~~~~-asLlv~i~f~ 591 (591)
+|++|.+..|++... +.|.|.++|.
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 799999999999844 7999998874
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-12 Score=135.59 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=85.2
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|+|+|..|.+|.. .|.++.+||||++.+...|....|+||++++.++||+|||+|.|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 458899999999843 466788999999999998888899999999999999999999999976554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
||||..+++||.|...+.++.|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999999885
|
|
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-11 Score=107.43 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=83.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 541 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~ 541 (591)
|+|+|+.|.+|+. . +.+||||.|.+.+ ...+||+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 7899999999963 1 4689999999865 23578999988 999999999999876554 35777788
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.+...++.++|.+.+....+..+. .|++|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555566676555544443333 588998776655556788888765
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 |
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.6e-11 Score=107.90 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=79.1
Q ss_pred CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007734 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 484 d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 4457789999999964 2457899998899999999999998766556799999999987 7999999999999873
Q ss_pred -C---cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 564 -Q---GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 564 -~---GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
. +.+|.+|.+ .+.+.|.+++.|
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357889965 235788888876
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-11 Score=101.89 Aligned_cols=85 Identities=38% Similarity=0.536 Sum_probs=73.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+.+. ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~------~~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPS------KDSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSS------SSTTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCC------cccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 7899999999964 12345689999999987554 668999999999999999999999888888899999999
Q ss_pred cCCCCCCccEEEE
Q 007734 544 DMSEKDDFGGQTC 556 (591)
Q Consensus 544 d~~~~dd~lGq~~ 556 (591)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
|
C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A .... |
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
Probab=99.24 E-value=4e-11 Score=106.15 Aligned_cols=98 Identities=21% Similarity=0.328 Sum_probs=74.5
Q ss_pred EEEeccccCcCCCCCccCCCCCCCceEEEEEeccC-CCceeeeccccCCCCCCccCcEEEEeee---cCC-ccEEEEEEE
Q 007734 467 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH 541 (591)
Q Consensus 467 ~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p-~d~~k~kTkvi~nn~NPvWNEtf~F~v~---~pe-la~Lrf~V~ 541 (591)
-.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 4568888853 2456789999999987532 12346799999999999999 6777643 222 468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-eEEEc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPL 571 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL 571 (591)
|++..+++++||++.++++.|..+. +.+.+
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~~~~~~~~ 108 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKSSPLEFEL 108 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcCCCceEEe
Confidence 9998888999999999999998553 34443
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom |
| >cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.6e-11 Score=114.80 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=84.2
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc------ccchHHHHHHHHhhhccccC
Q 007734 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt------s~i~f~dvi~aI~~~AF~~S 195 (591)
.+|+-|....+ +.+..+|..||..|||.||+|||...| +.|||.|+.++. ...+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888766555 888999999999999999999998766 479999999986 56889999999999999 88
Q ss_pred CCceEEeeccCCCH----HHHHHHHHHHHHHhh
Q 007734 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (591)
Q Consensus 196 ~yPvILSlE~Hcs~----~qQ~~ma~~l~~~~G 224 (591)
.+|++|.||.+++. .++..+++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 666777777776653
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=124.21 Aligned_cols=121 Identities=23% Similarity=0.292 Sum_probs=94.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 539 (591)
..|.|+|+.|.+|+.. +..+.+||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999742 2235689999999874 44678899999999999999999999776555 579999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccC-eEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~-asLlv~i~f 590 (591)
|||.|.++++++||++.+||..+.... .|.+|....-..-.. +-|++...+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887665 477776532222111 466665554
|
|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.3e-10 Score=95.44 Aligned_cols=99 Identities=38% Similarity=0.556 Sum_probs=81.1
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|.|+.|+++... ......+|||++++.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999988531 122457999999997632 3467899999889999999999998776567899999998
Q ss_pred cCCCCCCccEEEEEECCccCCcceEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGIRAVP 570 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~GyR~vp 570 (591)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876668999999999999999887643
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. |
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.1e-10 Score=135.78 Aligned_cols=114 Identities=16% Similarity=0.311 Sum_probs=92.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 539 (591)
.+.|+|+|+.|+++. ..++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 467999999999984 2246789999999874 236689999999999999999999987754 459999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---eEEEccC---CCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD---RKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d---~~g~~~~~asLlv~i~f 590 (591)
|||+|..+ +|.+|.+.|++..+-.+- -+++|.+ ++|.+ -+|.++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999885 569999999999987553 3689985 45553 368888887
|
|
| >cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=99.42 Aligned_cols=97 Identities=24% Similarity=0.257 Sum_probs=78.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCC--CCCceEEEEEeccCCCceeeeccccCCCCC--CccCcEEEEeeec---------
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV--------- 530 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~--~~DpyV~V~i~g~p~d~~k~kTkvi~nn~N--PvWNEtf~F~v~~--------- 530 (591)
|+|.|..+++++... .+..+ .+||||++.+.+. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 789999999975421 12223 4899999999875 356789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 531 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 531 ------------pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
.++ ..|.++|||.|..+++++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999998765
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.5e-10 Score=119.24 Aligned_cols=116 Identities=25% Similarity=0.372 Sum_probs=88.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.+++++|++|++|.. .|..|.+||||.+.+. ..++||++|..++||+|||.|+|.+++. ...|++.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 458899999999954 2445789999999886 3688999999999999999999999865 346999999
Q ss_pred eccCC-----------CCCCccEEEEEECCccCCc-ceEEEccCCCCCcccCeEEEEEEE
Q 007734 542 EYDMS-----------EKDDFGGQTCLPVSELKQG-IRAVPLHDRKGERYKSVKLLMHFE 589 (591)
Q Consensus 542 D~d~~-----------~~dd~lGq~~ipL~sL~~G-yR~vpL~d~~g~~~~~asLlv~i~ 589 (591)
|+|.. ..|||+||..|.+..|... --|..|-....+..-.+-+-+||.
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhis 422 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHIS 422 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEE
Confidence 98853 3589999999999988533 246666555555544444555543
|
|
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.6e-09 Score=86.66 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=74.3
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|.|++|+++... ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46889999988542 2235689999999875 3567899998889999999999998764556799999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
+....+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87666889999999999987
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. |
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.5e-09 Score=117.11 Aligned_cols=125 Identities=18% Similarity=0.275 Sum_probs=99.8
Q ss_pred ceeEEEEEEeccccCcC-C-----------CCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEe
Q 007734 461 KKTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 527 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~-~-----------~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~ 527 (591)
.++|.|+|+.|.+|+.. . ..+-....+.+||||.|.+.+ ....||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 35689999999988631 0 000001124579999999976 356799999886 699999999998
Q ss_pred eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCccc-CeEEEEEEEEC
Q 007734 528 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 591 (591)
Q Consensus 528 v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~-~asLlv~i~f~ 591 (591)
+..+ .+-|.|+|+|.|..+ ..+||.+.||+..|-.|- +|+|+.+.+|+++. ++.|-|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8765 478999999999877 679999999999999884 79999999999984 47999999884
|
|
| >cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.2e-09 Score=108.09 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=109.4
Q ss_pred CCcccceeeeccCcccccCCC--CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~ 189 (591)
+.||++.-|--|||++-.... -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 679999999999998764432 44566667789999999999999999864 24688999976555 899999999999
Q ss_pred hccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccccEEEecC
Q 007734 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 190 ~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (591)
+--..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998764 3445666677766665432 24789999999999999865
|
This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.6e-09 Score=111.93 Aligned_cols=165 Identities=21% Similarity=0.264 Sum_probs=109.0
Q ss_pred CCCCCCCCCCccccccccee-eeec-cCCCCcceeee-eeeeeecCceeeeecCCcccCCCCCCCccC---CC-------
Q 007734 389 IRVDSSNYNPLIGWSHGAQM-VAFN-MQGHGRSLWLM-HGMFRANGGCGYVKKPNFLLQTGPHNEVFD---PK------- 455 (591)
Q Consensus 389 ~Ri~SSN~~P~~~W~~G~Qm-VALN-~QT~D~~m~lN-~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~---p~------- 455 (591)
||+.--..||. |+-.-.+ |+.+ .|+.-+-+.+. ..+|..|+--|.|.=|....+......... |.
T Consensus 206 T~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~ 283 (421)
T KOG1028|consen 206 TRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEEL 283 (421)
T ss_pred eeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccc
Confidence 44555555553 3332222 2333 34444444444 367888888888877722222111000000 00
Q ss_pred C-C-------CCCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe
Q 007734 456 V-K-------LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 527 (591)
Q Consensus 456 ~-~-------~p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~ 527 (591)
. + +|....|+|.|+.|++|.. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.
T Consensus 284 ~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~ 357 (421)
T KOG1028|consen 284 AGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD 357 (421)
T ss_pred cceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe
Confidence 0 1 2345679999999999953 345577899999998865444567789999999999999999998
Q ss_pred eecCCc--cEEEEEEEeccCCCCCCccEEEEEECCc
Q 007734 528 LSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 528 v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
|....+ +.|.++|||+|..+++++||++.+...+
T Consensus 358 vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 358 VPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred CCHHHhheeEEEEEEEEcccccccceeeEEEecCCC
Confidence 875444 5699999999999999999998887766
|
|
| >cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=104.50 Aligned_cols=139 Identities=18% Similarity=0.267 Sum_probs=104.9
Q ss_pred CCCCcccceeeeccCcccccCCCC--CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc-cchHHHHHHH
Q 007734 110 DMTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRS 186 (591)
Q Consensus 110 dM~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts-~i~f~dvi~a 186 (591)
--++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++... ++..++||..... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999988653 3344444578889999999999998753 4578999865443 7899999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--ccEEEe
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIIIS 251 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~-~~~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIlik 251 (591)
|+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||-
T Consensus 85 i~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 85 VVDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 99986433333389999999987664 3344443 68999999886443 36899999998 554443
|
This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). |
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=117.87 Aligned_cols=104 Identities=26% Similarity=0.402 Sum_probs=89.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|.+++|++|+. .+..+-+||||++.+.+ +..+||++++.|+||+|||.|..+|.+.....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 558999999999964 45667789999999876 34789999999999999999999998877788999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcce---EEEccCCC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRK 575 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~ 575 (591)
|||...+++.||++.++|..|.+|.. .|||-.+.
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 99999999999999999999998853 47775443
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.7e-08 Score=106.62 Aligned_cols=95 Identities=24% Similarity=0.379 Sum_probs=77.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--CceeeeccccCCCCCCccCcEEEEeeec----CCccE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL 535 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--d~~k~kTkvi~nn~NPvWNEtf~F~v~~----pela~ 535 (591)
++|.|.|+.|.++.. .|.+|-+||||.|++..--. -....||+|+..++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 457888888887742 36678899999999864211 1234689999999999999999999863 24689
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCcc
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSEL 562 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL 562 (591)
|.|+|.|+|..+.+||.|++.+.|..+
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCC
Confidence 999999999999999999999988877
|
|
| >PLN02352 phospholipase D epsilon | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-06 Score=98.19 Aligned_cols=118 Identities=18% Similarity=0.256 Sum_probs=88.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.++|.++|..|.-+...+.. ........||||.|.+.+ ....|| .|.-||+|||+|...+..+-.+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~----~~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGN----KKVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCC----cEEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 46799999998733211110 000111239999999976 344577 4556999999999998766446799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc----eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~Gy----R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+|. ..+||.+.+|+..|-.|- +|+|+.+.+|+++.++.|-|+++|+
T Consensus 81 k~~-----~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KTK-----CSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ecC-----CeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 982 679999999999998883 6999999999999889999999884
|
|
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.6e-06 Score=94.68 Aligned_cols=93 Identities=23% Similarity=0.317 Sum_probs=73.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|.|+|.+|.++.. ...-..+.+|||+.+...+ ....||++++|++||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 578999999998842 2122457789999999764 3455999999999999999998776521 134899999
Q ss_pred eccCCCCCCccEEEEEECCccC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.+...+|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9777788999999999998875
|
|
| >cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.1e-05 Score=70.58 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=62.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|+|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889999887321 1111356789999999875 457888874 79999999999994 345799999997
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
.. ...-.+|..-++++.|.
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIA 87 (109)
T ss_pred CC-CeecceeeehhhHHHHH
Confidence 53 22446777777777663
|
This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.8e-05 Score=85.54 Aligned_cols=113 Identities=24% Similarity=0.333 Sum_probs=86.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|..|++||. .+..+..|||+.|.+.. +...||.+|..++-|.|.|+|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 458999999999974 24556789999998854 456799999999999999999998743 3556889999
Q ss_pred eccCCCCCCccEEEEEECCccC--Ccc-eEEEc--cCCCCCcccCeEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELK--QGI-RAVPL--HDRKGERYKSVKLLM 586 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~--~Gy-R~vpL--~d~~g~~~~~asLlv 586 (591)
|.| .++|+.||.++|.-..|. +|. .|..| .|++-+.-+..-|.|
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~v~l~l 122 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGKVHLEL 122 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhceeEEEEE
Confidence 999 788999999999877763 454 34555 466666544434433
|
|
| >KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00014 Score=79.24 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=91.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccC-cEEEEeeecCCcc--EEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN-EEFEFPLSVPELA--LLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWN-Etf~F~v~~pela--~Lrf 538 (591)
.+|.|+|..|++||.-. ......|.||+|.+.. ..+||.+...++||.|| +-|.|.|...++. -|.+
T Consensus 3 gkl~vki~a~r~lpvmd-----kasd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMD-----KASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCcccc-----cccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 45889999999997411 1123468899999874 57899999999999999 4599999877663 5899
Q ss_pred EEEeccCCCCCCccEEEEEECCccC----------Cc---ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK----------QG---IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~----------~G---yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++.|+|.-+.+|-||.+.|.++-|. .| --|+|++|.-...-+...+.|+++++
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999998888999999999988763 23 25889998544444445777887764
|
|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00015 Score=79.76 Aligned_cols=104 Identities=28% Similarity=0.391 Sum_probs=81.4
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC-C-ceeeeccccCCCCCCccCcEEEEeeec---CCccEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-D-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 536 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~-d-~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~L 536 (591)
.+++|+|+.|.+|.. ...+.-.|||+|.+.|... | ..++.|++..||..|.+||+|+|.+.. |+.--|
T Consensus 1125 hkvtvkvvaandlkw-------qtsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKW-------QTSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccc-------hhccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 568899999988854 2234456899999998532 3 345678999999999999999998764 555579
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-Ccc--eEEEcc
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPLH 572 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~-~Gy--R~vpL~ 572 (591)
.|.|+|+.....|..+|-++++|.++. .|- -|+||-
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pLg 1236 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPLG 1236 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeecc
Confidence 999999987776789999999999984 453 588884
|
|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.61 E-value=4.9e-05 Score=88.38 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=78.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pel--a~Lrf 538 (591)
.+|+|-|--+++|+.- .....+||||+.++...|....|+||++++++.||.|||.+.+.- ....+ ..|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 5678888888888531 223458999999999988888899999999999999999999872 22222 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.||..+....+.|+|..+|||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999887777899999999998864
|
|
| >cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00048 Score=71.27 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.4
Q ss_pred CCcccceeeeccCcccccCCCCC---------CCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~ 181 (591)
+.||++=+|--|||+.-.+-... +..--.....-|..|.|-+.|.|.-.+ ++++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875443221 122223356778899999999996432 2245678887543 28999
Q ss_pred HHHHHHhhhccccCCCceEEeeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cccEEEe
Q 007734 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (591)
Q Consensus 182 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (591)
+|++.|+++.=.. .=-|||.+ .|.. ++.-..+.+++.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986444 56688877 4443 577788999999999999998753 23456899996 5555544
|
This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI |
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00018 Score=80.35 Aligned_cols=76 Identities=26% Similarity=0.417 Sum_probs=63.1
Q ss_pred CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---------------CccEEEEEEEe-ccCCCCCC
Q 007734 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 550 (591)
Q Consensus 487 ~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 550 (591)
+.+|||++|...|.-... .++|++++.+-||.|||.|.|.+..+ ++.-|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~-~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLK-EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhh-ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 458999999988743322 37899999999999999999998866 56678999998 56666689
Q ss_pred ccEEEEEECCccC
Q 007734 551 FGGQTCLPVSELK 563 (591)
Q Consensus 551 ~lGq~~ipL~sL~ 563 (591)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999987
|
|
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00013 Score=75.28 Aligned_cols=104 Identities=24% Similarity=0.321 Sum_probs=77.1
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCcc--EEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela--~Lrf~V 540 (591)
.|.|+++.+..+ ..+|..+-+||||++.+...-....++||.+.+++.||+||+.|.|.+..-+++ .+.+.|
T Consensus 234 ~l~vt~iRc~~l------~ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHL------ASSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeee------eccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 477888876555 235777889999998887333334567899999999999999999999887876 578899
Q ss_pred EeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCc
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 578 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~ 578 (591)
||++.....+++|-... -+||--++++..|.+
T Consensus 308 gd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence 99997766888875332 345555666666554
|
|
| >cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00078 Score=70.11 Aligned_cols=136 Identities=15% Similarity=0.209 Sum_probs=95.0
Q ss_pred CCcccceeeeccCcccccCCCCCC---------------------CCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEe
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~ 169 (591)
+.||.+..|--|||+.--+-.-.+ ..--.....=|..|+|-++|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 479999999999998654322221 11112245667889999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEeeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 007734 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (591)
Q Consensus 170 HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~H-----cs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L 244 (591)
||..- -.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|.++||+.++.+. ....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPRD--SDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCCc--cccCCCcHHHH
Confidence 88422 288999999999975544455688888643 3457788888999999999999762 23466789999
Q ss_pred c--ccEEEe
Q 007734 245 K--RRIIIS 251 (591)
Q Consensus 245 k--~KIlik 251 (591)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 774443
|
This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be |
| >cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0012 Score=59.79 Aligned_cols=81 Identities=25% Similarity=0.463 Sum_probs=59.2
Q ss_pred CCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec---------------CCccEEEEEEEeccCCC------
Q 007734 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------ 547 (591)
Q Consensus 489 ~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~---------------pela~Lrf~V~D~d~~~------ 547 (591)
.++||++.+.-+|.+ ..++|+++.++|-|.|+.+++|.+.. -+.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998877654 45689999999999999999997541 12256899999866432
Q ss_pred ----CCCccEEEEEECCcc---CCcc-eEEE
Q 007734 548 ----KDDFGGQTCLPVSEL---KQGI-RAVP 570 (591)
Q Consensus 548 ----~dd~lGq~~ipL~sL---~~Gy-R~vp 570 (591)
+|-.||.+.||+..| +.|. .|.|
T Consensus 112 ~~~~~DilLG~v~IPl~~Ll~~rsGitGW~p 142 (143)
T cd08683 112 IETSGDILLGTVKIPLRDLLTKRSGITGWYP 142 (143)
T ss_pred cCcCCcEEEEEEEeeHHHHhhcccCcccccc
Confidence 233688889998876 4554 3444
|
C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc |
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00019 Score=80.06 Aligned_cols=81 Identities=20% Similarity=0.416 Sum_probs=58.7
Q ss_pred eccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCC---------------------------------C---CCCc
Q 007734 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------E---KDDF 551 (591)
Q Consensus 508 kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd~ 551 (591)
-|.+.+.++||.|+|.|.|+|..-.--.+.+.+||+|.- + .|||
T Consensus 180 atsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDDF 259 (1103)
T KOG1328|consen 180 ATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDDF 259 (1103)
T ss_pred hcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCcccccc
Confidence 466777889999999999999865556788999998743 1 3899
Q ss_pred cEEEEEECCccCC-cc-eEEEccCCCCCcccCeEEEEEE
Q 007734 552 GGQTCLPVSELKQ-GI-RAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 552 lGq~~ipL~sL~~-Gy-R~vpL~d~~g~~~~~asLlv~i 588 (591)
+|...|||..+.+ |. +|..|--.+.+.--.+.+-+++
T Consensus 260 LGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lkl 298 (1103)
T KOG1328|consen 260 LGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKL 298 (1103)
T ss_pred ccccccchhcCCcchHHHHhccCcccccccccceEEEEE
Confidence 9999999999975 53 6666655444443333444443
|
|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00052 Score=79.29 Aligned_cols=94 Identities=19% Similarity=0.255 Sum_probs=75.9
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEE
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 538 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf 538 (591)
|+...++|-|..|.+|.. .|..+..||||.|.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 455566778888888743 366678999999998651 12246777889999999999999988887778999
Q ss_pred EEEeccCCCCCCccEEEEEECCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
.|||+|..+.++.+|+.++.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999889999999998765
|
|
| >cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.013 Score=55.57 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=67.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeecCC---ccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lr 537 (591)
..++|+|+++.++... ...|.||++.+......- ....|+.+.. -++.|||-++|++...+ .|.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 3489999999887541 124779999887421111 1123443332 46899999999887544 48999
Q ss_pred EEEEeccCCC----CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 538 IEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~----~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
|+||+..... ....+|.+.++|= .|++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999965321 1246999999975 478897766654
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c |
| >cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0079 Score=57.81 Aligned_cols=114 Identities=24% Similarity=0.212 Sum_probs=75.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCc-eeeecccc--CCCC--CCccCcEEEEeeec---CC
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSV---PE 532 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~-~k~kTkvi--~nn~--NPvWNEtf~F~v~~---pe 532 (591)
...++|+|.++.+++.... ....|.||++.+......- ....|+.. .+.+ .+.|||.++|++.. |-
T Consensus 7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 3458999999998875321 1235679999887422111 12244432 2332 57899999998764 44
Q ss_pred ccEEEEEEEeccCCC---------CCCccEEEEEECC----ccCCcceEEEccC-CCCCccc
Q 007734 533 LALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERYK 580 (591)
Q Consensus 533 la~Lrf~V~D~d~~~---------~dd~lGq~~ipL~----sL~~GyR~vpL~d-~~g~~~~ 580 (591)
.|.|.|++|+..... ....||++.+||= .|++|...+.|.- ....+++
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~ 142 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLG 142 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCC
Confidence 489999999966443 3468999999984 4789999988863 3444443
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c |
| >cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.014 Score=56.35 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=69.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeec---CCccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~Lr 537 (591)
..++|+|+++.++.. .....+.||++.+...... +....|+.+.-+-.+.|||.++|++.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 358999999998853 0123466888887642211 122345544434569999999998764 4458999
Q ss_pred EEEEeccCCC----------------CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 538 IEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~----------------~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
|+||+..... ....||++.++|= .|++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999865321 1358999999875 478898777664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty |
| >cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1 | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.01 Score=61.85 Aligned_cols=136 Identities=19% Similarity=0.274 Sum_probs=89.9
Q ss_pred CCcccceeeeccCcccc--cC-CCCCCC------------------------CChHHHHHHHhCCCcEEEEEeecCCCCC
Q 007734 112 TAPVSHYFIYTGHNSYL--TG-NQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL--~g-~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~ 164 (591)
+.||.+..|--|||+-- .. +.-.|. .--.....-|..|+|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 35999999999999632 22 211111 1112245567889999999996433234
Q ss_pred CceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCC---CHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCh
Q 007734 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL---TPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241 (591)
Q Consensus 165 ~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP 241 (591)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 578999843 22 99999999999753333455888886 43 3455567888999999999985432 1345789
Q ss_pred hhcc---ccEEEecC
Q 007734 242 ESLK---RRIIISTK 253 (591)
Q Consensus 242 ~~Lk---~KIlik~K 253 (591)
++|. .+|||-..
T Consensus 161 ~~l~~~~krVIi~y~ 175 (290)
T cd08616 161 EYLWEKGYQVIVFYH 175 (290)
T ss_pred HHHHhCCCEEEEEEC
Confidence 9997 33555443
|
This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to |
| >cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.016 Score=54.73 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=68.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCce-eeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~-k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.++|+|.+..+... ......+.||++.+........ ...|+.....-++.|||.++|++...+ .|.|.|
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 47788887776532 0112356788888774221111 223433333357999999999876444 489999
Q ss_pred EEEeccCCC--CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 539 EVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~--~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
+||+.+... ....||++.+||= .|++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999976443 3578999999985 478999888886
|
C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.00031 Score=72.45 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=75.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
..+..+|..|.+|.. .+..+..||||+..+...-....+.+|++..|++||.|||+..+.....+ .-.+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457888888888732 35567789999988775544555689999999999999988766543322 245889
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
.|.|.+-...++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999998888654
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.003 Score=72.09 Aligned_cols=87 Identities=22% Similarity=0.169 Sum_probs=70.8
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
..+...|+|++|. . .-.|+|..+-..| .+.+||.+.+++.||+||+...|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~-~------------~~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE-M------------KFKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh-h------------ccCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3456788888886 1 1137776555556 578999999999999999999999988888889999
Q ss_pred EEeccCCCCCCccEEEEEECCccC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|+|.+..+.++++|-+.+.|..+-
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f~ 138 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDFV 138 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhcc
Confidence 999999999999999998776653
|
|
| >cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=56.04 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=51.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCH
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 209 (591)
...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|.||++..++ -+.|.||.-...
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 456899999999999999999999995444 36899998 7789999988776 355777776653
|
The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho |
| >cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0099 Score=59.27 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..|+.+||+||+=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999996555 46999997665
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG) |
| >cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.017 Score=58.00 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45788999999999999999999995444 46999998776
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.02 Score=54.43 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=59.9
Q ss_pred CCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECC---
Q 007734 488 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVS--- 560 (591)
Q Consensus 488 ~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~ipL~--- 560 (591)
.+|.||++.+...... .....|+.+.-+-.+.|||-..|+|...++ |.|.|+||+.+..+....+|.+++||=
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 3577999888742111 112244444434468899999999876554 899999999875545678999999975
Q ss_pred -ccCCcceEEEcc
Q 007734 561 -ELKQGIRAVPLH 572 (591)
Q Consensus 561 -sL~~GyR~vpL~ 572 (591)
.|+.|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 478898888775
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty |
| >cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.016 Score=57.64 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+.|..+|..|+..||..||+||+=-.| +.|+|.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999996555 46999998775
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor. |
| >PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0086 Score=59.74 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=32.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
..+.|.++|..|+..|+++||+|||=-.| +.|||+|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCee
Confidence 34899999999999999999999996555 47999998654
|
; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B .... |
| >cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.012 Score=49.92 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=47.2
Q ss_pred ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccCC
Q 007734 504 TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 504 ~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
....||.+.+...||+|.|+|.|.+....+ ..|.|.|+.. ..+...||++.+.++++.+
T Consensus 34 pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~~--~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 34 PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQTQ--TPRKRTIGECSLSLRTLST 94 (103)
T ss_pred CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeecc--CCccceeeEEEeecccCCH
Confidence 456789888888999999999999876555 4577888873 3457899999999988753
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos |
| >cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.026 Score=56.48 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999996555 46999997665
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE. |
| >cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.066 Score=51.81 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=63.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 539 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~ 539 (591)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||-++|++...+ .|.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 37888888763311 1111234588887764211112234555544557999999999987554 4899999
Q ss_pred EEeccCCC----------------CCCccEEEEEECC----ccCCcceEEEc
Q 007734 540 VHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPL 571 (591)
Q Consensus 540 V~D~d~~~----------------~dd~lGq~~ipL~----sL~~GyR~vpL 571 (591)
||+..... ....||++.++|= .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 99853211 1346888888875 47888766655
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir |
| >cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.031 Score=56.27 Aligned_cols=97 Identities=20% Similarity=0.248 Sum_probs=65.6
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc------cchHHHHHHHHhhh--cc-
Q 007734 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts------~i~f~dvi~aI~~~--AF- 192 (591)
-|||-|.--.= ...||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~P---------l~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKRP---------LYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred ccccccccccc---------hHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 59999987443 4569999999999999953 2 3678888765443 34566666655443 23
Q ss_pred ccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccC
Q 007734 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (591)
Q Consensus 193 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~ 229 (591)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998654433444444456666554
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.1 Score=54.26 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.7
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEe---ecC----CCCCCceEeeCCcccccchHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---Wdg----~~~~~piv~HG~tlts~i~f~dvi 184 (591)
+.||++..|--|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987655322223333446777899999988765 211 01123335555 34567999999
Q ss_pred HHHhhhccccCCCceEEeecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccc---cEEEecC
Q 007734 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (591)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~-----Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (591)
+.|+.+.=....=-|||+|-+ || .+.+ ..+.+.+.++|++.-+.+. ......-|+.++|.+ ++||--+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987555555679999943 44 3554 5778889999988555432 111234578888854 4555443
|
This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl |
| >cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.072 Score=55.08 Aligned_cols=137 Identities=17% Similarity=0.243 Sum_probs=89.6
Q ss_pred cCCCCcccceeeeccCcccccC---CCCC---CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTG---NQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g---~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
-|-+.||++=.|--||||.-.. ..+. +.+--..+..=|..|+|-++|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 3456899999999999987532 2211 1222234677789999999998854 257999963 2368999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhcccc-EEEecCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (591)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998643333344999996554322222355788999999998753 221222 66776644 5555554
|
The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u |
| >cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.056 Score=55.05 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
=+-|.++|..|+..||..||+||+=-.| +.|||+|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999996555 469999999873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.05 Score=50.52 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=53.8
Q ss_pred ceEEEEEeccCCCc--eeeeccccCCC-CCCccCcEEEEeeec---CCccEEEEEEEeccCCCCC----CccEEEEEECC
Q 007734 491 FYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS 560 (591)
Q Consensus 491 pyV~V~i~g~p~d~--~k~kTkvi~nn-~NPvWNEtf~F~v~~---pela~Lrf~V~D~d~~~~d----d~lGq~~ipL~ 560 (591)
.||++.+.-....- ....|+.+.-+ .++.|||.++|++.. |-.|.|.|+||+.+..... ..||++.+||=
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 36666665221111 12256655555 689999999999764 5558999999997755434 58999999975
Q ss_pred c----cCCcceEEEcc
Q 007734 561 E----LKQGIRAVPLH 572 (591)
Q Consensus 561 s----L~~GyR~vpL~ 572 (591)
. |++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 4 67888888775
|
7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A .... |
| >cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.12 Score=52.24 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999995444 36999997765
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.094 Score=53.09 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=49.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--c------------------------------cchHHH
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--A------------------------------PVELIK 182 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--s------------------------------~i~f~d 182 (591)
-+-|..+|..|+..||+.||+|+.=-.| +.|||.|=.|+- + -.+|.|
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~iptL~e 92 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTLDRTTNGKGKVSDLTLAEIRKLRLKDGDGEVTDEKVPTLEE 92 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCCccccCCCCchhhCcHHHHHhCCcCCCcCCCCCCCCCCHHH
Confidence 3778999999999999999999996555 469999966551 1 134788
Q ss_pred HHHHHhhhccccCCCceEEeeccCCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLT 208 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs 208 (591)
|++.+++. +.|.||.-..
T Consensus 93 vl~~~~~~--------~~l~iEiK~~ 110 (240)
T cd08566 93 ALAWAKGK--------ILLNLDLKDA 110 (240)
T ss_pred HHHhhhcC--------cEEEEEECch
Confidence 88777652 6778887744
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function. |
| >cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.13 Score=52.67 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=33.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996545 36899996544
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G |
| >cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.13 Score=52.73 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~t 173 (591)
.-+-|..+|..|+..|+..||+|||=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 55888999999999999999999995444 4699999853
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.16 Score=50.82 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=53.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc------------------------ccc-hHHHHHHHH
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------------------------APV-ELIKCLRSI 187 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt------------------------s~i-~f~dvi~aI 187 (591)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+. .+| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345788999999999999999999995444 469999976652 124 589999876
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHH
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~ 220 (591)
+.. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 541 3466776643 22334444444
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form. |
| >KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.034 Score=58.73 Aligned_cols=107 Identities=23% Similarity=0.238 Sum_probs=77.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
+..|.|+||.|++|.... .....++|||+|++.+...-..+.+|+...++..|.+-....|.=..| ...|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k~-----~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVKP-----GSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEecccccccC-----CcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 457999999999996421 112368999999998765555678999999999998888888765433 56788888
Q ss_pred Ee-ccCCCCCCccEEEEEECCccC----CcceEEEccC
Q 007734 541 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLHD 573 (591)
Q Consensus 541 ~D-~d~~~~dd~lGq~~ipL~sL~----~GyR~vpL~d 573 (591)
|. +.....+.|+|.+.+-+.+|. ++.-|.+|+-
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlfg 379 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLFG 379 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeeccC
Confidence 85 434445678998888888774 4456666663
|
|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.18 Score=42.99 Aligned_cols=62 Identities=13% Similarity=0.343 Sum_probs=49.1
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~-~---~~~~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.+++..... -+.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 47789999996 2 599999999999752 4654 688999999887642 1346899999999886
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.26 Score=48.22 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=41.7
Q ss_pred ChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007734 138 SDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (591)
Q Consensus 138 s~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~ 188 (591)
+..++.+|+.. .-||+|++.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 57899999998 9999999986 5 5799999999988888999998874
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.078 Score=54.46 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.||.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCccc
Confidence 4778999999999999999999997655 479999998864
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4. |
| >cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.091 Score=53.31 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45788999999999999999999995444 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.21 Score=55.60 Aligned_cols=84 Identities=21% Similarity=0.297 Sum_probs=67.4
Q ss_pred eeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCC----CCCCccEEEEEECCccC-CcceEEEccCCCCCccc
Q 007734 506 MKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYK 580 (591)
Q Consensus 506 k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~----~~dd~lGq~~ipL~sL~-~GyR~vpL~d~~g~~~~ 580 (591)
..+|.++.+..||.|-+.|.....+.+...|+|.|+|-+.. ...+|+|++..-++.+- ...+.++|.-+.++.-.
T Consensus 42 ~~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~ 121 (529)
T KOG1327|consen 42 VGRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAG 121 (529)
T ss_pred ccceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCC
Confidence 34889999999999999999888888888999999997643 34689999988888764 45567777777777777
Q ss_pred CeEEEEEEE
Q 007734 581 SVKLLMHFE 589 (591)
Q Consensus 581 ~asLlv~i~ 589 (591)
.+++.++.+
T Consensus 122 ~g~iti~ae 130 (529)
T KOG1327|consen 122 SGTITISAE 130 (529)
T ss_pred cccEEEEee
Confidence 778887765
|
|
| >KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.13 Score=54.94 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=85.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-CC----c---
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PE----L--- 533 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-pe----l--- 533 (591)
..|.+.|.+|++.+...... -.|.||+++..-.-....+.||.+++++-.|.|+|.|...+.. +. .
T Consensus 367 ~elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 34667777887765421111 1356998887644333457789999999999999999988763 21 1
Q ss_pred ---cEEEEEEEeccCC-CCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 534 ---ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 534 ---a~Lrf~V~D~d~~-~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
--++|.++....+ ..|.++|.+.+.|.-|..- ..+++|+| |...-++.|.|++.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2388999987654 4577999999998887654 34689975 555567788888754
|
|
| >cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.13 Score=52.45 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 34778999999999999999999996555 469999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo |
| >cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.17 Score=51.62 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|..++..|+..||..||+|||=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999996555 469999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.21 Score=53.73 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=35.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.=+.|.++|..|+..|+.-||+|||=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999996555 469999998764
|
|
| >cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.23 Score=51.10 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=35.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999995444 369999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated. |
| >cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.2 Score=50.38 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 469999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.21 Score=52.25 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|.+++..|+..||+.||+|+|=-.| +.|||.|=.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4778999999999999999999996444 479999988763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family. |
| >cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.21 Score=52.85 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 455888999999999999999999996544 369999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP |
| >cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.74 Score=44.99 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=37.7
Q ss_pred ceeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCCCC--CccEEEEEEC
Q 007734 504 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD--DFGGQTCLPV 559 (591)
Q Consensus 504 ~~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d--d~lGq~~ipL 559 (591)
...++|-+...+-+|.|||++...+... +.+.|+|+++......+. ..+|-+.+||
T Consensus 52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL 111 (189)
T cd08695 52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL 111 (189)
T ss_pred cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence 3467888888888999999999887643 347899988775432211 3344444444
|
Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int |
| >cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins | Back alignment and domain information |
|---|
Probab=91.42 E-value=2.7 Score=41.26 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=49.3
Q ss_pred eeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCC-C---CCccEEEEEECC-----ccCCcceEEEcc
Q 007734 505 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH 572 (591)
Q Consensus 505 ~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~lGq~~ipL~-----sL~~GyR~vpL~ 572 (591)
..++|-+...+-+|.|+|++...+... +.+.|+|.++...... + ...+|-+.+||- -|+.|-+.++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 457788877788999999999887643 3578999997644221 1 246788888874 277888888776
|
Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.25 Score=51.26 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=39.1
Q ss_pred cccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 127 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
|+.+.-..-+-+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996444 4699999888743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism. |
| >cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.25 Score=51.86 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-+..+|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 34778999999999999999999996555 369999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv |
| >cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5 | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.27 Score=50.84 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.6
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
+-+..++..|+..||..||+|||=-.| +.|||+|=.||
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996544 46999999888
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs. |
| >cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=90.59 E-value=0.26 Score=51.51 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+.|..+|..|+..||..||+||+=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34788999999999999999999996555 469999987763
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), |
| >cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.31 Score=51.52 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=39.1
Q ss_pred cCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 123 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.|.-| .-..-+.|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22335888999999999999999999996555 469999988764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia |
| >cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.3 Score=50.60 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.5
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996544 479999998875
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp |
| >cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.48 Score=47.59 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+.|.++|..|+..|++.||+|+.=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 369999988764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip |
| >PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional | Back alignment and domain information |
|---|
Probab=89.51 E-value=3.9 Score=44.10 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.7
Q ss_pred HHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHHhhhcccc--CCCceEEeeccC---CCHHHHHHH
Q 007734 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (591)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~--S~yPvILSlE~H---cs~~qQ~~m 215 (591)
..+=|..|+|-+.|=|=-.+ +.++-.++||.. .++|.||++.|+++.=.. ..=-|||.+-.. =....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 45557889999888874322 223456677652 478999999999854332 234577777542 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----ccEEEecCCC
Q 007734 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (591)
Q Consensus 216 a~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (591)
.+.|+. |||+|. |+.... . -+.++|- .+|||-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 667776 999987 433322 2 3788887 6788877543
|
|
| >cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.38 Score=50.71 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
+.-+.+..+|..|+..||..||+||+=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 445889999999999999999999996555 4799999988643
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. |
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=89.35 E-value=1.7 Score=37.47 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=45.7
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-|..+|.+||++ ..|+..+|+..|..+=.. ...+.+.+..|+...-. .+.+.++|.+|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 477899999977 899999999998764321 11245667777776532 2346899999998875
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=89.23 E-value=0.37 Score=48.98 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|.+++..|+..|+..||+||.=-.| +.|||.|=.||.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45778999999999999999999996555 469999988874
|
|
| >smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain | Back alignment and domain information |
|---|
Probab=89.10 E-value=2.1 Score=37.33 Aligned_cols=56 Identities=21% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEEEEecc
Q 007734 489 PDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYD 544 (591)
Q Consensus 489 ~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~V~D~d 544 (591)
.+.||++.+......- ....|+.+.-...+.|||-.+|++...+ .|.|.|+||+..
T Consensus 32 ~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~ 91 (100)
T smart00142 32 SDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK 91 (100)
T ss_pred ceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence 4779999887422111 1224544433345899999999887544 489999999854
|
Outlier of C2 family. |
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=88.47 E-value=1.4 Score=37.45 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=46.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+-. .+.+.++++.|..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 477899999943 689999999999754333 244 6788888887642 1246899999999876
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.58 Score=47.05 Aligned_cols=39 Identities=23% Similarity=0.134 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|..++..|+..|++-||+|++=-.| +.+||.|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 4788999999999999999999996555 46999998876
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A | Back alignment and domain information |
|---|
Probab=88.09 E-value=1.6 Score=42.31 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=37.1
Q ss_pred eeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCCCC---CccEEEEEECCc----cCCcceEEEcc
Q 007734 506 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 572 (591)
Q Consensus 506 k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d---d~lGq~~ipL~s----L~~GyR~vpL~ 572 (591)
...|.+...+-+|.|+|+|..++..+ +.+.|.|++++.....+. ..+|-+.+||-. +..|...+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777788999999999887643 357899999986543211 467777777764 33455666664
|
|
| >cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=87.89 E-value=0.61 Score=48.94 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=35.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|=.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999996555 469999988773
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP |
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=87.67 E-value=0.37 Score=56.72 Aligned_cols=85 Identities=21% Similarity=0.324 Sum_probs=62.2
Q ss_pred CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eec--------CCccEEEEEEEeccCCCCCCccEE
Q 007734 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 484 d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~--------pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
+..+.+|||+.|...+ +.+.|-++.+++||.||.+..|. +.. ...-.+.|+|+|.|..+.++|.|.
T Consensus 222 dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr 296 (1105)
T KOG1326|consen 222 DKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGR 296 (1105)
T ss_pred CcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhcc
Confidence 3345689999999887 56679999999999999999884 221 122468899999999999999997
Q ss_pred EEEECC-ccC-CcceEEEccC
Q 007734 555 TCLPVS-ELK-QGIRAVPLHD 573 (591)
Q Consensus 555 ~~ipL~-sL~-~GyR~vpL~d 573 (591)
...... -+. +-..|+|++.
T Consensus 297 ~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 297 KKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred cccceEEEecCCccceEEeec
Confidence 543322 223 3356788864
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=87.55 E-value=1.2 Score=33.74 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.0
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
+.|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 578999999999 55665437899999999988632 347899999999885
|
... |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=87.52 E-value=1.8 Score=36.97 Aligned_cols=63 Identities=10% Similarity=0.224 Sum_probs=45.4
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-|..+|.+|+.. .+|+.++|+.||..+-. ....+...+.+++..+-. -+.+.+++++|+.+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 467889998832 38999999999998631 112355678888876532 1346899999998876
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=87.14 E-value=2.8 Score=35.91 Aligned_cols=63 Identities=13% Similarity=0.266 Sum_probs=46.5
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~--~-~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|+..+-. -+.+.+++++|..+|.
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHH
Confidence 57778999993 3 4 59999999999875432 12356788888888642 1246799999999876
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PF15627 CEP76-C2: CEP76 C2 domain | Back alignment and domain information |
|---|
Probab=86.83 E-value=10 Score=35.99 Aligned_cols=126 Identities=19% Similarity=0.186 Sum_probs=81.6
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC------
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 532 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe------ 532 (591)
|.+..|.++|+.|+-...-. .+.-+..+..+.+.++= ..++++|+.+.-..+|.|+|.|-|++....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 34567999999987542100 00002233344444431 137899999999999999999999886442
Q ss_pred -c------cEEEEEEEeccCCCCCCccEEEEEECCc-cCCcce----EEEccCCCCC-cccCeEEEEEEEEC
Q 007734 533 -L------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEFI 591 (591)
Q Consensus 533 -l------a~Lrf~V~D~d~~~~dd~lGq~~ipL~s-L~~GyR----~vpL~d~~g~-~~~~asLlv~i~f~ 591 (591)
. .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|+...++ .++-+-|-++++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELl 150 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELL 150 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEee
Confidence 1 1366666666655556788888887665 456764 4677765555 35556788888863
|
|
| >cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins | Back alignment and domain information |
|---|
Probab=86.73 E-value=0.79 Score=47.88 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcce
Confidence 345789999999999999999999996555 479999987764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins | Back alignment and domain information |
|---|
Probab=86.72 E-value=1.8 Score=41.79 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=47.6
Q ss_pred ccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCC-----CCCccEEEEEECCc-----cCCcceEEEccCCC
Q 007734 509 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-----KDDFGGQTCLPVSE-----LKQGIRAVPLHDRK 575 (591)
Q Consensus 509 Tkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-----~dd~lGq~~ipL~s-----L~~GyR~vpL~d~~ 575 (591)
|.++..+-+|.|+|++...+... +...|.|++++.+... ....+|-+.+||-. |+.|...+|++-..
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~~ 134 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKYD 134 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEecC
Confidence 44444448999999999887533 3578999999866332 24578888888887 67788888876433
|
Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo |
| >PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] | Back alignment and domain information |
|---|
Probab=86.66 E-value=14 Score=33.67 Aligned_cols=115 Identities=20% Similarity=0.191 Sum_probs=68.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeec---C-----
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P----- 531 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~---p----- 531 (591)
+..+.|+|....+++. .+..|.|.............|.... .+..-.|||+|.+.+.. .
T Consensus 6 kf~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~ 73 (143)
T PF10358_consen 6 KFQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEF 73 (143)
T ss_pred eEEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcE
Confidence 3457777777777642 1123444443321111123444332 34567899999997653 1
Q ss_pred CccEEEEEEEeccCCCCCCccEEEEEECCccCCc-----ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 532 ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 532 ela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+--.+.|.|+.....++...+|.+.|.|.....- .+.++|... +-..|+|.|.|.+
T Consensus 74 ~~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 74 QPKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eeEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 1236889998875334335899999999987542 245677655 4456788887765
|
Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1). |
| >cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins | Back alignment and domain information |
|---|
Probab=86.36 E-value=0.83 Score=48.33 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
..-+-|..+|..|+..||.-||+||+=-.| +.|||.|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445888999999999999999999996555 4699999888743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation. |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=86.26 E-value=2.4 Score=36.26 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=48.7
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 26 ei~~if~~~~~-~--~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.|..+|..|.. + ++|+..+|+..|..+=++ .++. +++.++|...-. -..+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 57889999987 4 899999999999975344 3566 788888876541 13478999999998863
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.78 E-value=1.3 Score=49.40 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=58.5
Q ss_pred cCCCCCCCceEEEEEe-ccCCCceeeeccccCCCCCCccCcE-EEEe-eecCC-ccEEEEEEEeccCCCCCCccEEEEEE
Q 007734 483 FDAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEE-FEFP-LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 558 (591)
Q Consensus 483 ~d~~~~~DpyV~V~i~-g~p~d~~k~kTkvi~nn~NPvWNEt-f~F~-v~~pe-la~Lrf~V~D~d~~~~dd~lGq~~ip 558 (591)
.+.++..|||..+.-. +.......++|.++++++||.|-+. .... +...+ -..+.+.+||++..++++++|++.-+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 3667889999776543 2222233569999999999999853 2221 22222 35688999999988878999999999
Q ss_pred CCccCC
Q 007734 559 VSELKQ 564 (591)
Q Consensus 559 L~sL~~ 564 (591)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 998864
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=83.40 E-value=4 Score=34.64 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=47.9
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|.++|..|. .+ . .|+.++|+..|+..-+.. ..+.+.+.+|+..+... +.+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHH
Confidence 57889999996 43 6 499999999998643331 24678899999887521 246799999998876
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins | Back alignment and domain information |
|---|
Probab=83.31 E-value=1.5 Score=46.11 Aligned_cols=52 Identities=8% Similarity=-0.019 Sum_probs=38.3
Q ss_pred eeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 118 YFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 118 YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
||=|+|-.. ..+. ++...++.|...|++-||+||+=-.| +.|||+|-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 777766521 1111 46789999999999999999995444 3699999988743
|
This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos |
| >COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.09 E-value=1.3 Score=44.99 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=32.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCC
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (591)
-+-+.++|..|+..|+.+||+|+.--.| +.+||+|=+
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~ 55 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDE 55 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccC-CcEEEeccc
Confidence 3778999999999999999999997655 469999977
|
|
| >cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins | Back alignment and domain information |
|---|
Probab=82.39 E-value=1.5 Score=47.28 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=33.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCC-cc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG-TM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~-tl 174 (591)
.-+-|.++|..|+..|+.-||+|++=-.| +.|||.|=. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34788999999999999999999996555 469999985 44
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=82.38 E-value=6 Score=29.15 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.4
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
+..+|..|-.+ +.++.++|...++... . ..+.+.+..++.++... +.+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888654 7899999999998643 3 35777788888887522 23579999999876
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=82.19 E-value=5.7 Score=34.00 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=46.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..+-.+ +.|+.++|..+|+.. ..+.+.+..|+..+... ..+.+++++|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 34677788888643 889999999999872 35778888888876421 246799999998876
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=81.97 E-value=1.4 Score=44.64 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-+..+|..|+..|+ -||+||+=-.| +.|||.|=.||.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678899999999999 89999997555 479999987764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4 | Back alignment and domain information |
|---|
Probab=81.77 E-value=1.5 Score=46.17 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=33.9
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+-+.++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 677899999999999999999997555 469999988873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet. |
| >cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins | Back alignment and domain information |
|---|
Probab=80.97 E-value=1.8 Score=46.46 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-+..+|..|+..||.-||+|++=-.| +.|||.|=.||.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996544 469999988774
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti |
| >KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.59 E-value=2.2 Score=45.65 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+.|..+|.+|...|+.|||+|+=...| +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 568999976655
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 591 | ||||
| 2fju_B | 799 | Activated Rac1 Bound To Its Effector Phospholipase | 5e-44 | ||
| 1qas_A | 622 | 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies | 2e-34 | ||
| 1djg_A | 624 | Phosphoinositide-Specific Phospholipase C-Delta1 Fr | 2e-34 | ||
| 3qr0_A | 816 | Crystal Structure Of S. Officinalis Plc21 Length = | 6e-24 | ||
| 3qr1_A | 813 | Crystal Structure Of L. Pealei Plc21 Length = 813 | 8e-24 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 6e-23 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 6e-23 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 9e-05 | ||
| 4dnl_A | 140 | Crystal Structure Of A C2 Domain Of A Protein Kinas | 1e-04 | ||
| 1a25_A | 149 | C2 Domain From Protein Kinase C (Beta) Length = 149 | 2e-04 | ||
| 1dsy_A | 139 | C2 Domain From Protein Kinase C (Alpha) Complexed W | 2e-04 | ||
| 3gpe_A | 137 | Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain | 2e-04 | ||
| 2uzp_A | 144 | Crystal Structure Of The C2 Domain Of Human Protein | 7e-04 |
| >pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799 | Back alignment and structure |
|
| >pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622 | Back alignment and structure |
|
| >pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624 | Back alignment and structure |
|
| >pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 | Back alignment and structure |
|
| >pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4DNL|A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution Length = 140 | Back alignment and structure |
|
| >pdb|1A25|A Chain A, C2 Domain From Protein Kinase C (Beta) Length = 149 | Back alignment and structure |
|
| >pdb|1DSY|A Chain A, C2 Domain From Protein Kinase C (Alpha) Complexed With Ca2+ And Phosphatidylserine Length = 139 | Back alignment and structure |
|
| >pdb|3GPE|A Chain A, Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain Complexed With Ca2+ And Ptdins(4,5)p2 Length = 137 | Back alignment and structure |
|
| >pdb|2UZP|A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. Length = 144 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 591 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 1e-156 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 1e-139 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 1e-138 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 1e-132 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 3e-19 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 6e-12 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 1e-11 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 3e-10 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 5e-10 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 8e-09 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 9e-09 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 2e-08 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 2e-08 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 4e-08 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 5e-08 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 6e-08 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 7e-08 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 8e-08 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 1e-07 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 5e-06 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 1e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 2e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 6e-07 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 3e-07 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 3e-07 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 5e-07 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 6e-07 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 1e-06 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 1e-06 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 2e-06 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 2e-06 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 2e-06 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 2e-06 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 3e-06 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 3e-06 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 4e-06 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 4e-06 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 7e-06 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 8e-06 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 1e-05 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 2e-05 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 2e-05 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 3e-05 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 3e-05 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 5e-05 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 5e-05 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 3e-04 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 461 bits (1187), Expect = e-156
Identities = 172/568 (30%), Positives = 256/568 (45%), Gaps = 31/568 (5%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 82 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 139
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
+ F YL S V+ DM P+SHY + + HN+YL +QL S IR
Sbjct: 140 KDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIR 199
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
AL KG R +ELD W ++ + HG T T+ + LR+I++YAF AS YPV+++LE
Sbjct: 200 ALCKGCRCLELDCWDGPNQEPIIY-HGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLE 258
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+H + + Q +A + LG IL P PSPE LK +I++ K L A
Sbjct: 259 NHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGG 318
Query: 264 EKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEA 323
E E + A E + + + +
Sbjct: 319 ENGSEATDVSDEVEAAEMEDEAV---------------------RSQVQHKPKEDKLKLV 357
Query: 324 PEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLR 383
PE +I GG S SE + + GN VR L R
Sbjct: 358 PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSR 417
Query: 384 IYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL 443
IYP G R DSSNY+P+ W+ G Q+VA N Q G + + G F+ NGGCGYV KP FL
Sbjct: 418 IYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLR 477
Query: 444 QTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD 503
+ P + ++ V + G P + + S D V I GV D
Sbjct: 478 DPNTTFNSRALT-QGPWWRPERLRVRIISGQ--QLPKVNKNKNSIVDPKVIVEIHGVGRD 534
Query: 504 TVMKKTKTLEDNWI-PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
T ++T + +N P W+ EFEF ++VP+LAL+R V +YD S K+DF GQ+ +P + L
Sbjct: 535 TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSL 594
Query: 563 KQGIRAVPLHDRKGERYKSVKLLMHFEF 590
KQG R V L + G+++ S L +
Sbjct: 595 KQGYRHVHLLSKNGDQHPSATLFVKISI 622
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
Score = 422 bits (1085), Expect = e-139
Identities = 152/619 (24%), Positives = 251/619 (40%), Gaps = 46/619 (7%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT--MTVDHLHRFLIEVQKED-- 56
+ + F ++ P+ + +F Y MT +HL +F+ + Q++
Sbjct: 196 DAINPEDFPEPVYKSFLMSLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRL 254
Query: 57 ------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHH 109
A + Q +ID QR L+ E +L G N L+ + +HH
Sbjct: 255 NSLLFPPARPDQVQGLIDKYE--PSGINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLHH 312
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D ++
Sbjct: 313 DMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPII 372
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++L
Sbjct: 373 THGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDML 432
Query: 228 FTPGSECLK-----EFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 433 LTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAV 492
Query: 283 WGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIA-----IHAGKP 337
W E ++++ + G ++EE +S A ++ +P
Sbjct: 493 WAGEEGTELE-EEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 551
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 552 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 611
Query: 397 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 456
P + W+ G QMVA N Q + +F NG GY+ K F+ + F+P
Sbjct: 612 MPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPDKQ---FNPFS 668
Query: 457 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT---LE 513
+ T F + Y V + G+P D +
Sbjct: 669 VDRIDVVVATT------LSITVISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPST 722
Query: 514 DNWIPSWNEE-FEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 571
++ P W EE F F + +PELA LR+ V E + F G +P++ L G + L
Sbjct: 723 NSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCL 778
Query: 572 HDRKGERYKSVKLLMHFEF 590
H L + E
Sbjct: 779 HSESNMPLTMPALFIFLEM 797
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
Score = 422 bits (1084), Expect = e-138
Identities = 144/609 (23%), Positives = 248/609 (40%), Gaps = 66/609 (10%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
+ F +F++A E + ++ +F + S+N +T FL ++Q+
Sbjct: 207 AIDLKAFDFDTFFKFYLALLERSE-IEGIFKELSKNKGNITTVMFRDFLNDMQRHPSLHK 265
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDM 111
+A+I+ + ++ L E +L + N + + +M
Sbjct: 266 TLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEENNLTPMHRLDLGANM 325
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 171
++ Y+I + HN+YLTG+QL S + L G R +ELD W + + + HG
Sbjct: 326 KLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPI-ITHG 384
Query: 172 GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG 231
TM V + +I E AF S+YPV+++ E+H + Q +A+ + GE+L
Sbjct: 385 FTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKP 444
Query: 232 SECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
+ P+P L+++I+I K + EE D
Sbjct: 445 IDGHPLKPGVPLPTPYDLRKKILIKNKKMHKGTGDDEELAGLTD---------------- 488
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
++ ++ + A E L+ ++ K
Sbjct: 489 --------------EEKKKIEKEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQK 534
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
D S+ E Q N + D V + ++ + RIYPKG RVDSSNY P I W+ G
Sbjct: 535 KDRHYEMS-SMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGC 593
Query: 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 466
Q+VA N Q ++ + G+F NG GY+ KP F+ + ++ FDP + +
Sbjct: 594 QLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKL---DKRFDPFTESTVDGVVAG 650
Query: 467 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTKTLEDNWI-PSWNEE 523
T+ + F + Y V + G+P DTV K KTK +E+N + P ++E+
Sbjct: 651 TIEI------KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEK 704
Query: 524 FEF--PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKS 581
+ +P+LA++RI V E + F G +P+ +K G R VPL +
Sbjct: 705 VFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGL 760
Query: 582 VKLLMHFEF 590
+ H
Sbjct: 761 ASVFAHIVA 769
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
Score = 407 bits (1047), Expect = e-132
Identities = 164/658 (24%), Positives = 259/658 (39%), Gaps = 84/658 (12%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
S + RF PD K + + ++ +T++ L F+ + Q++ + +
Sbjct: 201 SIRPDEFSLEIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNE 260
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHDM 111
A+ +I+ + +R +++E F +YL G+ N L + DM
Sbjct: 261 VLYPPLRPSQARLLIEKYEPNQQF--LERDQMSMEGFSRYLGGEENGILPLEALDLSTDM 318
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV-LH 170
T P+S YFI + HN+YLT QL S +AL G R +ELD+W + H
Sbjct: 319 TQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITH 378
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFT 229
G TMT V L L +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 379 GFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLI 438
Query: 230 PGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWG 284
+ PSP+ L RI++ K + SA E+
Sbjct: 439 EPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSA 498
Query: 285 KEVPNLKSLNNSACD-------------------------------------KDDFDGGV 307
P+ L + + D D +
Sbjct: 499 ATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEE 558
Query: 308 DNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-----------KECLKVDPDKVRRLS 356
+++EE+ + E ++A + L E + S
Sbjct: 559 EDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSS 618
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGH 416
E + + + V + ++ L RIYPKG RVDSSNY P + W+ G Q+VA N Q
Sbjct: 619 FVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTL 678
Query: 417 GRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYY 476
++ L G+F NG GY+ KP F+ + FDP ++ +
Sbjct: 679 DVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKS---FDPFTEVIVDGIVANA------LRV 729
Query: 477 DFPHTHFDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSWNEE-FEFP-LSVPE 532
F + Y V + G+P DT K +T+T + N + P W+EE F+FP + +P
Sbjct: 730 KVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT 789
Query: 533 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590
LA LRI E F G LPVS ++ G V L + + LL++ E
Sbjct: 790 LASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTEA 843
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339 | Back alignment and structure |
|---|
Score = 88.4 bits (218), Expect = 3e-19
Identities = 36/227 (15%), Positives = 64/227 (28%), Gaps = 49/227 (21%)
Query: 98 NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157
+ L P HN+Y AL G ++ELD+
Sbjct: 11 SSGLVPRGSHMEPAATTYGTSTSVGVHNAY-------EKEKYRYFADALDSGAALLELDL 63
Query: 158 WPNSKKDNVDVLHG------------------GTMTAPVELIKCLRSIKEY-AFVASEYP 198
W N+ + V H T + + CL ++ + P
Sbjct: 64 WSNALGRSWRVSHSNPLGNNSNCEGAANASELRTKSRDQDFAGCLSDMRAWHDAHPGHRP 123
Query: 199 VVITLE--DHLTPDLQAKVAE---MVTQTLGEILFTPGSECLKE-----------FPSPE 242
+++ +E D AE ++ Q LG+ ++ PG +PS
Sbjct: 124 ILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEAVRAGGWPSRA 183
Query: 243 SLKRRII-------ISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
L + + + K P + L E +G +
Sbjct: 184 DLAGKFLFELIPGTVEEKNPFDKLWTDVEYAGHLKDLAAQGKLAQST 230
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 6e-12
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 22 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79
Query: 544 DMSEKDDFGGQTCLPVSELKQG 565
+ D+ G VS +K G
Sbjct: 80 NYV-MDETLGTATFTVSSMKVG 100
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566
+T T+ N P WN+ F FP+ +L + V + D + DF G+ +P+ ++ G
Sbjct: 47 LQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ 105
Query: 567 -RAVPLHDRKGERYKSVKLLMHFEFI 591
L ++ E+ + + + I
Sbjct: 106 PNCYVLKNKDLEQAFKGVIYLEMDLI 131
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-10
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSELK 563
KKTK +++ P WNE EF L L L I V +++ ++ G + + +L
Sbjct: 40 KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLT 99
Query: 564 QG------IRAVPLHDRKGE 577
+ + L + KG+
Sbjct: 100 GDQSRSLPYKLISLLNEKGQ 119
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 5e-10
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 11/108 (10%)
Query: 463 TLKVTVYMGEG-----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
LK+ + W D Y + + D+ + +T T +
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD----DSRIGQTATKQKTNS 62
Query: 518 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
P+W++EF V + + V DDF + EL Q
Sbjct: 63 PAWHDEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 5e-10
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 463 TLKVTVYMGEG----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 518
L+V + G + + D Y V + + +T T + P
Sbjct: 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD----QVRVGQTSTKQKTNKP 85
Query: 519 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 574
++NEEF V + L + V D F L EL + A +
Sbjct: 86 TYNEEFCAN--VTDGGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEG 139
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 5e-09
Identities = 92/639 (14%), Positives = 191/639 (29%), Gaps = 183/639 (28%)
Query: 36 ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR------ELKH-------------- 75
E G + ++ ++ V ++ D + + D + E+ H
Sbjct: 10 ETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 76 LNIFQRRGLNL-EAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY-TGHNSYLTGNQL 133
+ + + F + + IN +P + + P +Y + NQ+
Sbjct: 68 FWTLLSKQEEMVQKFVEEVL-RINYKFLMSP-IKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 134 NSDCSDVPIIR---ALQKGVRVIELDIWPNSKKDNVDVLHG--G----TMTAPVELIKCL 184
+ +V ++ L++ + EL P NV ++ G G + V
Sbjct: 126 FAK-YNVSRLQPYLKLRQALL--ELR--PA---KNV-LIDGVLGSGKTWVALDV-----C 171
Query: 185 RSIK-EYAFVASEYPVV-ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
S K + ++ + + L++ +P+ V EM+ Q L + P+
Sbjct: 172 LSYKVQCKM---DFKIFWLNLKNCNSPET---VLEML-QKL----------LYQIDPNWT 214
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS---ADEEAWGKEVPNLKSLNNSAC- 298
S S+ + E + S+ + + + N S C
Sbjct: 215 SRSDH---SSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQNAKA--WNAFNLS-CK 267
Query: 299 ------DKDDFD--GGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-KECLKVDP 349
K D D S E + L+ + L +E L +P
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 350 DKVRRLSLSEQQLENAVGTYGN----------DIVRFTQRNL-----------LRIYPKG 388
RRLS+ + + + + T+ N I+ + L L ++P
Sbjct: 328 ---RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384
Query: 389 IRVDSSNYNPLIGWSHGAQMVAFNM--QGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTG 446
+ + + + W + + + H SL V+K
Sbjct: 385 AHIPTILLSLI--WFDVIKSDVMVVVNKLHKYSL---------------VEKQPKESTIS 427
Query: 447 PHNEVFDPKVKLPAKKTLK---VTVYMGEGWY--YDFPHTHFDAYSPPDFYARVG----I 497
+ + KVKL + L V Y + D + D Y FY+ +G
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY----FYSHIGHHLKN 483
Query: 498 AGVPADTVMKKTKTLEDNWI--------PSWNEEFEFPLSVPELALLRIEVHEYDMSEKD 549
P + + L+ ++ +WN S+ L +++ ++ + + D
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA----SGSILNT-LQQLKFYKPYICDND 538
Query: 550 DFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 588
P ++R V ++ F
Sbjct: 539 --------------------PKYERL------VNAILDF 551
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 33/284 (11%), Positives = 81/284 (28%), Gaps = 85/284 (29%)
Query: 3 KQTYRVCFCFRRRFHVAA-----------SEAPDAV------KSMFDQYSENGTMTVDHL 45
++ + F H+ V S+ ++ + T+++ +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 46 HRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTP 105
+ ++V+ E++ + ++I+D K F L +Y + I
Sbjct: 432 Y-LELKVKLENEYALH--RSIVDHYNIPKT---FDSDDLIPPYLDQYFYSHI-------- 477
Query: 106 VVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI-WPNSKKD 164
HH R++ LD + K
Sbjct: 478 -GHHLKNIEHPERM----------------------------TLFRMVFLDFRFLEQK-- 506
Query: 165 NVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTL 223
+ H T A ++ L+ +K Y + ++ + E + +
Sbjct: 507 ---IRHDSTAWNASGSILNTLQQLKFY-------------KPYICDN--DPKYERLVNAI 548
Query: 224 GEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
+ L + S + RI + + + EA ++ ++
Sbjct: 549 LDFLPKIEENLIC---SKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 8e-09
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 492 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 550
Y RV + + +TKT++ + P WNEE F + P+ L EV + + +DD
Sbjct: 44 YVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDENRLTRDD 102
Query: 551 FGGQTCLPVSELKQG 565
F GQ +P+ L
Sbjct: 103 FLGQVDVPLYPLPTE 117
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 9e-09
Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 13/111 (11%)
Query: 452 FDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT 511
L K L++TV + + P Y V + G KKT+
Sbjct: 26 LGSMGSLTMKSQLQITVISAKLKENK------KNWFGPSPYVEVTVDGQS-----KKTEK 74
Query: 512 LEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+ P W + V ++ L V + + D G L + E
Sbjct: 75 CNNTNSPKWKQPLTVI--VTPVSKLHFRVWSHQTLKSDVLLGTAALDIYET 123
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-08
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 492 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 550
Y RV + + + +TKT++ + P WNEE F + P+ + EV + + +DD
Sbjct: 32 YVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDENRLTRDD 90
Query: 551 FGGQTCLPVSELKQG 565
F GQ +P+ L
Sbjct: 91 FLGQVDVPLYPLPTE 105
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-08
Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 14/129 (10%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 522
TL+V + + F P Y ++ + + + P WNE
Sbjct: 11 TLEVVLVSAK----GLEDADFLNNMDP--YVQLTCRTQDQKSNVAEGMGTT----PEWNE 60
Query: 523 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAVPLHDRKGERYK 580
F F +S L+ ++ + D+ +DD G+ +P+ + + I + K E YK
Sbjct: 61 TFIFTVSEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 581 -SVKLLMHF 588
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-08
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 563
+KTKT++ + P WNE F F L + L +E+ ++D++ ++DF G +SEL+
Sbjct: 70 QKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQ 127
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-08
Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%)
Query: 459 PAKKTLKVTVYMGEG-WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
L V V + + Y ++ + +P K+T
Sbjct: 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL--LPDQKNSKQTGVKRKTQK 80
Query: 518 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
P + E + F + E L + V ++D + G+ +P+ E+
Sbjct: 81 PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 7e-08
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 71 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 128
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+T + +W E PL+ EL L + + D + G+ L +
Sbjct: 61 AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
LP L VT+ + D D Y + + +KT ++
Sbjct: 148 LPTAGLLTVTIIKAS----NLKAM--DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 201
Query: 518 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
P++NE F ++ + L I V +YD ++ G +
Sbjct: 202 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 248
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 5e-06
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIEVH 541
D+ D Y ++ + +P +TK P +NE F+F + + ELA L V+
Sbjct: 36 DSNGFSDPYVKIYL--LPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93
Query: 542 EYDMSEKDDFGGQTCLP 558
++D + D GQ L
Sbjct: 94 DFDRFSRHDLIGQVVLD 110
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 79 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 138
Query: 565 G 565
G
Sbjct: 139 G 139
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 541
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 166 DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVL 225
Query: 542 EYDMSEKDDFGGQTCLPVSELKQGIR 567
+YD K+D G+ + + +R
Sbjct: 226 DYDKIGKNDAIGKVFVGYNSTGAELR 251
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 490 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSE 547
D Y +V + +P +TK P +NE+F F + ELA L + V+++D
Sbjct: 41 DPYVKVFL--LPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98
Query: 548 KDDFGGQTCLPVSELKQG 565
K D G+ +P++ + G
Sbjct: 99 KHDIIGEFKVPMNTVDFG 116
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 3e-07
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK-----------DDFGGQT 555
K+TKT+ N P W E F F +++ V + D K DDF GQT
Sbjct: 51 KRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQT 109
Query: 556 CLPVSELKQGI-RAVPLHDRKGERYKS 581
+ V L + L R + S
Sbjct: 110 IIEVRTLSGEMDVWYNLDKRTDKSAVS 136
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-07
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+KT D P ++E + + LA L+ V + ++ F G+ + +
Sbjct: 63 RKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 483 FDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 539
RV + T +T+ L+ + +NE F +S P L LR++
Sbjct: 58 LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117
Query: 540 VHEYDMSEKDDFGGQTCLPVSEL 562
V D S ++ G + ++E+
Sbjct: 118 VCTTDRSHLEECLGGAQISLAEV 140
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564
KT+ + P +NEEF + + +LA L I V +YD+ + +D+ G L +S +
Sbjct: 76 HKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135
Query: 565 GIR 567
++
Sbjct: 136 RLK 138
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEV-HEYDMSEKDDFGGQTCLPVSELKQ 564
+KT+T+ D P+++E F FP+ + L + V + S + G V L
Sbjct: 65 QKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124
Query: 565 GIRAV----PLHDRKGERYKSVKLLM 586
+ + L R K +K+
Sbjct: 125 PDKEISGWYYLLGEHLGRTKHLKVAR 150
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-06
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 488 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE 547
+ Y + + V + T+ + PSW ++F F ++ +L L +EV +
Sbjct: 22 KFNTYVTLKVQNVKSTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-I 73
Query: 548 KDDFGGQTCLPVSELKQ 564
D G +P+ ++Q
Sbjct: 74 WDTMVGTVWIPLRTIRQ 90
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 484 DAYSPPDFYARVGIAGVPADTVM--KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 539
D D Y +V + A + KKT + +NE F F + L +
Sbjct: 46 DVSGLSDPYVKVNL--YHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103
Query: 540 VHEYDMSEKDDFGGQTCLPVSELKQGIR 567
V + + +++ G+ L + G
Sbjct: 104 VLDSERGSRNEVIGRLVLGATAEGSGGG 131
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+TK N P WNE F F E + L ++V +YD ++D G+ +P++++
Sbjct: 63 LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKV 121
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-06
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 548
PD +A++ + G T T+++ P WN+ ++ V + + I V + K
Sbjct: 26 PDPFAKIVVDG---SGQCHSTDTVKNTLDPKWNQHYDLY--VGKTDSITISVWNHKKIHK 80
Query: 549 DD---FGGQTCLPVSELKQG 565
F G L + + +
Sbjct: 81 KQGAGFLGCVRLLSNAISRL 100
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 18/76 (23%), Positives = 27/76 (35%)
Query: 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 546
S P Y +V + A KKT+ P + + F S L I +Y
Sbjct: 50 STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109
Query: 547 EKDDFGGQTCLPVSEL 562
+ F G + + EL
Sbjct: 110 DHKCFMGVAQILLEEL 125
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-06
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564
KKT T + N P +NE F F + +L + I V + D ++D G+ L
Sbjct: 55 KKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG 114
Query: 565 GIR 567
++
Sbjct: 115 EVK 117
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 3e-06
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 37 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94
Query: 544 DMSEKDDFGGQTCLPVSELK 563
+ D+ G VS +K
Sbjct: 95 NY-VMDETLGTATFTVSSMK 113
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 507 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+TKTL + P WNE ++ ++ ++ LRI V + D ++F G+T + +L
Sbjct: 68 LRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 507 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELK 563
KT+ L P+++E F F + ++ L + +D +DD G+ +P+S ++
Sbjct: 60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE 119
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 7e-06
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 483 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 540
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 40 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99
Query: 541 HEYDMSEKDDFGGQTCLPVSELKQGIR 567
+YD K+D G+ + + +R
Sbjct: 100 LDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 8e-06
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDM 545
P +V + + ++TK ++ + P WN+ + +S+ +L L + V +YD
Sbjct: 49 PG-RGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR 107
Query: 546 SEKDDFGGQTCLPVSELKQGIRAV---PLHDR 574
+DF G+ + +S PL ++
Sbjct: 108 FSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDD--FGGQTCLPVSEL 562
+KT + P +++ F+F +S+PE+ L + V D G+ + ++
Sbjct: 62 RKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASE 121
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 562
+KTK P++NE + E L++ V + ++ F G LP+ +
Sbjct: 58 RKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 540
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 34 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93
Query: 541 HEYDM--SEKDDFGGQTCLPVSEL 562
+ E+ +F G+ + +
Sbjct: 94 WDQARVREEESEFLGEILIELETA 117
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 3e-05
Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 507 KKTKTLEDNWIPSWNEEFEFPLSVPELA-LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
+T + +N P W ++ +F + LR++V + D DD G G
Sbjct: 427 FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRS---PHSG 483
Query: 566 IRAVPLHDRKGERYKSVKL 584
V G S
Sbjct: 484 FHEVTCELNHGRVKFSYHA 502
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Length = 144 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 3e-05
Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIP-SWNEEFEFPLSVPELA--LLRIEVHEYDM 545
D A+V G ++ LE+ ++E F +P++ +L I++ Y
Sbjct: 37 ADRIAKVTFRGQS-----FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91
Query: 546 SEKDDFGGQTCLPVSEL 562
+ G + + ++
Sbjct: 92 VFSNKLIGTFRMVLQKV 108
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 540
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 37 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96
Query: 541 HEYDM--SEKDDFGGQTCLPVSEL 562
+ E+ +F G+ + +
Sbjct: 97 WDQARVREEESEFLGEILIELETA 120
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 5e-05
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 490 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKD 549
+ Y + + V + T+ + PSW ++F F ++ +L L +EV + D
Sbjct: 33 NTYVTLKVQNVESTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-IWD 84
Query: 550 DFGGQTCLPVSELKQ 564
G +P+ ++Q
Sbjct: 85 TMVGTVWIPLRTIRQ 99
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 | Back alignment and structure |
|---|
Score = 42.7 bits (99), Expect = 3e-04
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYD---M 545
+Y + + + K ++ + W E FEF AL + D
Sbjct: 27 KRYYCELCLDDMLYARTTSKPRSASGDT-VFWGEHFEFNNLPAVRALRLHLYRDSDKKRK 85
Query: 546 SEKDDFGGQTCLPVSELKQG 565
+K + G +PV+ L
Sbjct: 86 KDKAGYVGLVTVPVATLAGR 105
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 100.0 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 100.0 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 100.0 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 100.0 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 99.94 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 99.72 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 99.72 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 99.71 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 99.68 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 99.67 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 99.66 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 99.66 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 99.62 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 99.61 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 99.61 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 99.6 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 99.6 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 99.59 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 99.59 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 99.58 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 99.58 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 99.58 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 99.58 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 99.58 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 99.58 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 99.57 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 99.57 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 99.57 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 99.57 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 99.57 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 99.57 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 99.56 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 99.56 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 99.54 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 99.54 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 99.54 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 99.53 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 99.52 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.49 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 99.43 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 99.42 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.4 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 99.39 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.38 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 99.35 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 99.31 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 99.3 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.21 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 98.98 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.98 | |
| 2plc_A | 274 | PI-PLC, phosphatidylinositol-specific phospholipas | 98.95 | |
| 1yrk_A | 126 | NPKC-delta, protein kinase C, delta type; C2 domai | 97.57 | |
| 3ea1_A | 298 | 1-phosphatidylinositol phosphodiesterase; phosphat | 97.4 | |
| 3v1h_A | 306 | 1-phosphatidylinositol phosphodiesterase; PI-catio | 97.35 | |
| 2enj_A | 138 | NPKC-theta, protein kinase C theta type; beta-sand | 97.34 | |
| 3qvq_A | 252 | Phosphodiesterase OLEI02445; structural genomics, | 96.4 | |
| 3no3_A | 238 | Glycerophosphodiester phosphodiesterase; structura | 96.32 | |
| 1vd6_A | 224 | Glycerophosphoryl diester phosphodiesterase; glyce | 96.3 | |
| 2otd_A | 247 | Glycerophosphodiester phosphodiesterase; structura | 96.07 | |
| 3ks6_A | 250 | Glycerophosphoryl diester phosphodiesterase; struc | 95.88 | |
| 2o55_A | 258 | Putative glycerophosphodiester phosphodiesterase; | 95.83 | |
| 1o1z_A | 234 | GDPD, glycerophosphodiester phosphodiesterase; TM1 | 95.81 | |
| 3i10_A | 278 | Putative glycerophosphoryl diester phosphodiester; | 95.65 | |
| 2pz0_A | 252 | Glycerophosphoryl diester phosphodiesterase; glyce | 95.49 | |
| 3ch0_A | 272 | Glycerophosphodiester phosphodiesterase; YP_677622 | 95.22 | |
| 3l12_A | 313 | Putative glycerophosphoryl diester phosphodiester; | 95.11 | |
| 3mz2_A | 292 | Glycerophosphoryl diester phosphodiesterase; struc | 95.08 | |
| 1zcc_A | 248 | Glycerophosphodiester phosphodiesterase; NYSGXRC, | 93.5 | |
| 3hhm_A | 1091 | Phosphatidylinositol-4,5-bisphosphate 3-kinase cat | 93.47 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 92.75 | |
| 2wxf_A | 940 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 92.52 | |
| 3l4c_A | 220 | Dedicator of cytokinesis protein 1; DOCK180, DOCK1 | 91.7 | |
| 1xx1_A | 285 | Smase I, sphingomyelinase I; structure, quick cryo | 91.54 | |
| 1ydy_A | 356 | Glycerophosphoryl diester phosphodiesterase; struc | 90.93 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 90.77 | |
| 2oog_A | 287 | Glycerophosphoryl diester phosphodiesterase; phosp | 90.58 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 90.49 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 90.3 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 89.67 | |
| 1e7u_A | 961 | Phosphatidylinositol 3-kinase catalytic subunit; p | 89.46 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 89.2 | |
| 2y3a_A | 1092 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 89.08 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 89.05 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 88.65 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 88.33 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 88.31 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 87.66 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 87.64 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 86.77 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 86.76 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 86.74 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 85.46 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 85.28 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 85.23 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 85.19 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 85.09 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 85.06 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 85.0 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 84.22 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 84.08 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 83.94 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 83.87 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 83.83 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 83.7 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 83.51 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 83.17 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 83.0 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 82.95 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 82.57 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 82.49 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 82.31 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 82.29 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 82.14 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 82.13 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 82.1 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 82.09 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 82.06 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 81.71 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 81.6 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 81.35 | |
| 3rlg_A | 302 | Sphingomyelin phosphodiesterase D lisictox-alphai; | 81.27 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 81.02 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 80.81 | |
| 1pul_A | 125 | Hypothetical protein C32E8.3 in chromosome I; alph | 80.79 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 80.77 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 80.75 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 80.7 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 80.58 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 80.57 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 80.53 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 80.49 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 80.35 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 80.24 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-148 Score=1253.99 Aligned_cols=537 Identities=32% Similarity=0.517 Sum_probs=451.6
Q ss_pred CCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCCCCC
Q 007734 22 EAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPP 100 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~n~~ 100 (591)
..|+||..+|..|..+ +.|+.++|++||.++|++..++.++|.+||++|..... ..+.+.|++++|.+||++.+|.+
T Consensus 77 ~~~~el~~aF~~fD~~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~--~~~dG~Is~deF~~~L~s~~~~~ 154 (624)
T 1djx_A 77 TQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSADGNA 154 (624)
T ss_dssp TCCHHHHHHHHHHHTTSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHH--HHHTTEECHHHHHHHHHSTTTBS
T ss_pred ccHHHHHHHHHHhcCCCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChh--hccCCCCCHHHHHHHhcCccccc
Confidence 3578999999999866 89999999999999999976899999999999973211 11346899999999999999999
Q ss_pred CCCC-CCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccch
Q 007734 101 LSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179 (591)
Q Consensus 101 ~~~~-~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~ 179 (591)
++|. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+
T Consensus 155 ~~p~~~~v~~dm~~pLs~Yfi~SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlts~i~ 233 (624)
T 1djx_A 155 FSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKIL 233 (624)
T ss_dssp BCGGGGSCCSCTTSCGGGEEECEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEECCTTSCCCCEE
T ss_pred cCcccccccccccCcchhheeecccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEecCCccccccc
Confidence 9864 6799999999999999999999999999999999999999999999999999999986 5799999999999999
Q ss_pred HHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCch
Q 007734 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEY 258 (591)
Q Consensus 180 f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~ 258 (591)
|+|||+||++|||++|+||||||||||||++||.+||+||++||||+|++++.+ ....||||++||||||||+|+++..
T Consensus 234 f~~v~~~I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik~k~~~~~ 313 (624)
T 1djx_A 234 FCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGL 313 (624)
T ss_dssp HHHHHHHHHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEEECCC---
T ss_pred HHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEEecCCCcc
Confidence 999999999999999999999999999999999999999999999999998744 4689999999999999999998654
Q ss_pred hhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCC-CCCCCccccccccccchhhccceEeecccc
Q 007734 259 LEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGV-DNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 337 (591)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 337 (591)
.+..... +. ++ + +.. ++++.++.+.+. ........++...+++++|++|+.|+.+++
T Consensus 314 ~~~~~~~----~~-------~~---~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ls~l~~y~~~~~ 371 (624)
T 1djx_A 314 LPAGGEN----GS-------EA---T-DVS-------DEVEAAEMEDEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVH 371 (624)
T ss_dssp ---------------------------------------------------------------CCCHHHHTTEEEEEEEC
T ss_pred ccccccc----Cc-------cc---c-cCC-------cccccccccccccccccccccccccccccHHHhhhhhhhcCcc
Confidence 3221100 00 00 0 000 000000000000 000001112234578999999999998888
Q ss_pred cCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCC
Q 007734 338 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHG 417 (591)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D 417 (591)
++++....+.....++|+||||+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|
T Consensus 372 f~~~~~~~~~~~~~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d 451 (624)
T 1djx_A 372 FGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPG 451 (624)
T ss_dssp CCCCCSSSSSSCCTTEEEEEEHHHHHHHHHHHHHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCS
T ss_pred CCCcchhhhcCCccceEeeccHHHHHHHHHHhHHHHHHHhhhcceeeccCCccCCCCCCCchHHhhccceeeeecccCCc
Confidence 88777655432115789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCC--C--CceeEEEEEEeccccCcCCCCCccCCCCCCCceE
Q 007734 418 RSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL--P--AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYA 493 (591)
Q Consensus 418 ~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~--p--~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV 493 (591)
++||||+|||+.||+|||||||++||... ..|+|.... | ....|+|+|++|++|+.. .....+.+||||
T Consensus 452 ~~m~ln~g~F~~ng~~GYvlKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~----d~~~~~~~DPYV 524 (624)
T 1djx_A 452 PEMDVYLGCFQDNGGCGYVLKPAFLRDPN---TTFNSRALTQGPWWRPERLRVRIISGQQLPKV----NKNKNSIVDPKV 524 (624)
T ss_dssp HHHHHHHHHHHSGGGCSEEECCGGGGCTT---CCCCTTSCCSSTTCCCEEEEEEEEEEESCCCC----SSCSSSCCCEEE
T ss_pred hHHhHHHHHhhcCCCCccEECCHHHcCCC---CCcCcccccccCCccceEEEEEEEEcCCCCcc----cccccCCCCcEE
Confidence 99999999999999999999999999874 258886543 3 457899999999999742 111356789999
Q ss_pred EEEEeccCCCceeeeccccCCC-CCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEcc
Q 007734 494 RVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 572 (591)
Q Consensus 494 ~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~ 572 (591)
+|.+.|.+.|..++||+++++| +||+|||+|.|.+..|++++|+|.|||+|..+++++||++++||++|++||||+||+
T Consensus 525 ~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~r~v~L~ 604 (624)
T 1djx_A 525 IVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLL 604 (624)
T ss_dssp EEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEEEEEEEE
T ss_pred EEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCcEEEeCC
Confidence 9999998888889999999998 999999999999999999999999999998888999999999999999999999999
Q ss_pred CCCCCcccCeEEEEEEEE
Q 007734 573 DRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 573 d~~g~~~~~asLlv~i~f 590 (591)
|..|+++.+++|||||+|
T Consensus 605 d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 605 SKNGDQHPSATLFVKISI 622 (624)
T ss_dssp CTTSCEEEEEEEEEEEEE
T ss_pred CCCcCCCCceEEEEEEEE
Confidence 999999999999999987
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-147 Score=1264.03 Aligned_cols=518 Identities=27% Similarity=0.431 Sum_probs=440.6
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhh--hhchhhhccCCCCHHH
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRE--LKHLNIFQRRGLNLEA 88 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~--~~~~~~~~~~~l~~~~ 88 (591)
+++|+||.+||..|+.+ ..||. +|++||+++|++.. ++.++|.+||++|+. ... ....+.|+++|
T Consensus 225 L~~R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~--~~~~g~Lsldg 301 (816)
T 3qr0_A 225 LLERSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKK--GKKKGQLTKEG 301 (816)
T ss_dssp HCCCTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGG--GCBTTEECHHH
T ss_pred cCCHHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchh--hhccCCccHHH
Confidence 46899999999999964 78999 99999999999853 689999999999984 211 12346799999
Q ss_pred HHHHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCce
Q 007734 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167 (591)
Q Consensus 89 F~~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~pi 167 (591)
|++||+|++|.++++ +..|+|||+||||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||
T Consensus 302 F~~yL~S~~~~~~~~~~~~v~~dm~~Pl~~YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~-~ePv 380 (816)
T 3qr0_A 302 LLYFLMCEENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKD-GEPI 380 (816)
T ss_dssp HHHHHHSGGGCSSCHHHHSSCSCCCSCGGGEEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTT-SSCE
T ss_pred HHHHhhcccccccchhhcccccccCCchhhheecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCC-CCce
Confidence 999999999999976 46799999999999999999999999999999999999999999999999999999986 5799
Q ss_pred EeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 007734 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (591)
Q Consensus 168 v~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~ 242 (591)
|||||||||+|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|++++.+. ...||||+
T Consensus 381 v~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP~ 460 (816)
T 3qr0_A 381 ITHGFTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPY 460 (816)
T ss_dssp ECCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSTTCCCCCTT
T ss_pred EccCCcccccccHHHHHHHHHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhhhccCCccccccccCCcCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999976432 26899999
Q ss_pred hccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007734 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (591)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (591)
+||||||||+|+++...... ++..++.+... +..+ .+.......+....+
T Consensus 461 ~Lk~kIlik~K~~~~~~~~~----------------~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~i 510 (816)
T 3qr0_A 461 DLRKKILIKNKKMHKGTGDD----------------EELAGLTDEEK-----------KKIE---KEKKDAGTAAKEAEA 510 (816)
T ss_dssp TTTTCEEEECCCCC--------------------------CCCHHHH-----------HHHH---HHHHHHGGGGSCCCC
T ss_pred HHcCCEEEEeCCCCCcCCCc----------------ccccccccchh-----------hccc---ccccccccccchhhh
Confidence 99999999999975311000 00000000000 0000 000000011123467
Q ss_pred chhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccc
Q 007734 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (591)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (591)
+++|++|++|+.+..+.++....... ..++|+||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||
T Consensus 511 ~~eLs~Lv~y~~~v~f~~f~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W 589 (816)
T 3qr0_A 511 AEEMSALVNYIQPVHFTTFEQAQKKD-RHYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYW 589 (816)
T ss_dssp CHHHHTTCSSSEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHCHHHHHHHTTTSCEEEECCTTCTTCCCCCTHHHH
T ss_pred HHHHHHHHhhhCCcCCCCcccchhcC-CcceEecccHHHHHHHHHhhhHHHHHhhhcccceeCCCccccCCCCCCchhhc
Confidence 89999999998776666666543332 34568999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCC----ceeEEEEEEeccccCcCC
Q 007734 403 SHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMGEGWYYDF 478 (591)
Q Consensus 403 ~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~----~~~L~V~Visa~~L~~~~ 478 (591)
++|||||||||||+|++||||+|||+.||+|||||||++||+.. ..|+|....+. +.+|+|+|++|++|+.
T Consensus 590 ~~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~-- 664 (816)
T 3qr0_A 590 NAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLD---KRFDPFTESTVDGVVAGTIEIKIISAQFLSD-- 664 (816)
T ss_dssp TTTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCHHHHCTT---CCCCTTCCSCCTTSCCEEEEEEEEEEECCCS--
T ss_pred ccCceEEeecCcCCChhhhhhhhhhccCCceeeeecChHhcCCC---cccCCCCCCCcCCccceEEEEEEEEcccCCC--
Confidence 99999999999999999999999999999999999999999863 46888754432 4789999999999953
Q ss_pred CCCccCCCCCCCceEEEEEeccCCCc--eeeeccccCCC-CCCccCcE-EEEe-eecCCccEEEEEEEeccCCCCCCccE
Q 007734 479 PHTHFDAYSPPDFYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEE-FEFP-LSVPELALLRIEVHEYDMSEKDDFGG 553 (591)
Q Consensus 479 ~~~~~d~~~~~DpyV~V~i~g~p~d~--~k~kTkvi~nn-~NPvWNEt-f~F~-v~~pela~Lrf~V~D~d~~~~dd~lG 553 (591)
..+||||+|++.|.|.|. .++||+++++| +||+|||+ |.|. |..|++++|+|.|||++ ++|+|
T Consensus 665 --------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfiG 732 (816)
T 3qr0_A 665 --------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIG 732 (816)
T ss_dssp --------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEEE
T ss_pred --------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCeee
Confidence 137999999999998887 67799999875 99999998 9998 88999999999999985 79999
Q ss_pred EEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 554 QTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 554 q~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++++||++|++|||||||+|..|+++..|+|||||++
T Consensus 733 ~~~ipL~~L~~GyR~vpL~~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 733 HRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVA 769 (816)
T ss_dssp EEEEESTTCCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEEEEHHHcCCcceEEEEeCCCCCCCCceEEEEEEEE
Confidence 9999999999999999999999999999999999986
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-146 Score=1262.22 Aligned_cols=546 Identities=28% Similarity=0.440 Sum_probs=426.3
Q ss_pred CCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHH
Q 007734 22 EAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFK 91 (591)
Q Consensus 22 ~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~ 91 (591)
..|+||.++|..|. .+ ++||.++|++||++.|++.. ++.++|.+||++|+... ...+.+.|++++|.+
T Consensus 216 ~~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~--~~~~dg~is~eeF~~ 293 (799)
T 2zkm_X 216 CPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSG--INAQRGQLSPEGMVW 293 (799)
T ss_dssp SCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHHHH
T ss_pred cCHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhccc--ccccCCccchhhhhh
Confidence 46899999999995 34 89999999999999999863 67889999999997321 112357899999999
Q ss_pred HhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC-CCCceEe
Q 007734 92 YLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVL 169 (591)
Q Consensus 92 ~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~ 169 (591)
||+|.+|.++++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ .++||||
T Consensus 294 ~L~S~~n~~~~~~~~~v~~dm~~PLshYfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~ 373 (799)
T 2zkm_X 294 FLCGPENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIIT 373 (799)
T ss_dssp HHHSTTSCSBCGGGGSSCSCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEEC
T ss_pred cccCccccccchhhcccccccCCchhhheEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEE
Confidence 999999999975 46799999999999999999999999999999999999999999999999999999972 2579999
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhh
Q 007734 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPES 243 (591)
Q Consensus 170 HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~ 243 (591)
|||||||+|+|+|||+||++|||++|+||||||||||| |++||.+||+||++||||+|++++.+. ...||||++
T Consensus 374 HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lPSP~~ 453 (799)
T 2zkm_X 374 HGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPED 453 (799)
T ss_dssp CTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTT
T ss_pred eCCcccccccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhhheecCCccccccccCCCCCCHHH
Confidence 99999999999999999999999999999999999999 999999999999999999999977442 378999999
Q ss_pred ccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCC---------cc
Q 007734 244 LKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEE---------DS 314 (591)
Q Consensus 244 Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 314 (591)
||||||||+|+++...+....+....++......+....|+.+...-.... .++.+++.+. .+++. +.
T Consensus 454 Lk~kIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 530 (799)
T 2zkm_X 454 LRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEE-EVEEEEEEES--GNLDEEEIKKMQSDEG 530 (799)
T ss_dssp TTTCEEEECCCC-----------------------------------------------------CCSHHHHHHHHHTTG
T ss_pred HCCCEEEEecCCCcccccccccccccccccccccCccccccCccccccccc-cccccccccc--cccchhhhhccccccc
Confidence 999999999998643211110000000000000001111221111000000 0000000000 00000 00
Q ss_pred ccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCC
Q 007734 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (591)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (591)
..+....++++|++|+.|+.+..+.++....+.. ..++|+||||+++.+++++++.+|++||++||+||||+|+|||||
T Consensus 531 ~~~~~~~~~~els~Lv~y~~~~~f~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SS 609 (799)
T 2zkm_X 531 TAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSS 609 (799)
T ss_dssp GGGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCC
T ss_pred ccccccchhhhhcceeEEecCcCCCchhhhhhcC-CccceecCCHHHHHHHHHHCHHHHHHHhhhcceeeccCCCcCCCC
Confidence 0112345789999999887665556676655432 356799999999999999999999999999999999999999999
Q ss_pred CCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCC----CceeEEEEEEe
Q 007734 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLP----AKKTLKVTVYM 470 (591)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p----~~~~L~V~Vis 470 (591)
||||++||++|||||||||||+|++||||+|||+.||+|||||||++||... ..|+|....+ +..+|+|+|++
T Consensus 610 N~~P~~~W~~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Vis 686 (799)
T 2zkm_X 610 NYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPD---KQFNPFSVDRIDVVVATTLSITVIS 686 (799)
T ss_dssp CCCSHHHHHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTCTT---SCCCTTSCCTTTTTTCEEEEEEEEE
T ss_pred CCCcHHHHhccceEeeeccccCchHHHHHHhhhhccCCCCceECCHHHhCCC---ccCCCcccccccceeeeeEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999863 3688865332 45789999999
Q ss_pred ccccCcCCCCCccCCCCCCCceEEEEEeccCCCce-eeecc-ccCCC-CCCccCc-EEEE-eeecCCccEEEEEEEeccC
Q 007734 471 GEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTK-TLEDN-WIPSWNE-EFEF-PLSVPELALLRIEVHEYDM 545 (591)
Q Consensus 471 a~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~-k~kTk-vi~nn-~NPvWNE-tf~F-~v~~pela~Lrf~V~D~d~ 545 (591)
|++|+. ..+||||+|++.|.|.|.. ++||+ ++++| +||+||| +|.| .|..|++++|+|.|||+|
T Consensus 687 a~~L~~----------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d- 755 (799)
T 2zkm_X 687 GQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG- 755 (799)
T ss_dssp EESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT-
T ss_pred ccccCc----------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC-
Confidence 999852 2479999999999888764 67999 88765 9999999 7999 899999999999999986
Q ss_pred CCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 546 SEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 546 ~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+++||++++||++|++|||||||+|..|+++..++|||||++
T Consensus 756 ---~d~iG~~~ipl~~L~~G~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 756 ---NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ---TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred ---CCccceEeeehhhcCCCcEEEeccCCCCCCCCceEEEEEEEE
Confidence 789999999999999999999999999999999999999987
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-145 Score=1250.75 Aligned_cols=549 Identities=29% Similarity=0.450 Sum_probs=439.3
Q ss_pred CCCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCC--------CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHH
Q 007734 21 SEAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFF 90 (591)
Q Consensus 21 ~~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~--------~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~ 90 (591)
++.|+||.+||..|. .+ ++||.++|++||+++|++. .++.++|.+||++|+.... ...++.|+++||+
T Consensus 219 l~~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~--~~~~g~LsldgF~ 296 (885)
T 3ohm_B 219 LCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQ--FLERDQMSMEGFS 296 (885)
T ss_dssp HSCCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHH--HHHTTEECHHHHH
T ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChh--hhccCccchhhhh
Confidence 467999999999995 44 8999999999999999985 3688999999999984321 1235789999999
Q ss_pred HHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceE
Q 007734 91 KYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDV 168 (591)
Q Consensus 91 ~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv 168 (591)
+||+|.+|.++++ +..|+|||+||||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +.++|||
T Consensus 297 ~yL~S~~~~~~~~~~~~v~~dm~~Pls~YfI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v 376 (885)
T 3ohm_B 297 RYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFI 376 (885)
T ss_dssp HHHTSTTSCSSCHHHHSSCSCCCSCGGGEEECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEE
T ss_pred hhccCcccCccCccccccccccCcchhhheeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEE
Confidence 9999999999976 4679999999999999999999999999999999999999999999999999999993 2358999
Q ss_pred eeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 007734 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (591)
Q Consensus 169 ~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~ 242 (591)
|||||||++|+|+|||+||++|||++|+||||||||||| +++||.+||+||++||||+|++++.+. ...||||+
T Consensus 377 ~hg~t~t~~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~~L~~~~~~~~~~~~~~~lpsp~ 456 (885)
T 3ohm_B 377 THGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQ 456 (885)
T ss_dssp CSTTSEECCEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGGGBCCSCBTTBCSSSSCCCCCTT
T ss_pred eeCCcccCcccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhHhhccCcccccccccCCcCCCHH
Confidence 999999999999999999999999999999999999999 799999999999999999999976432 36899999
Q ss_pred hccccEEEecCCCCchhhhh---hhhhh-----hc---cccC--CCCC-------Cccc-cc--CCCCCC----------
Q 007734 243 SLKRRIIISTKPPKEYLEAK---EEKEK-----EN---DSQR--GKGS-------ADEE-AW--GKEVPN---------- 289 (591)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~---~~~~~-----~~---~~~~--~~~~-------~~~~-~~--~~~~~~---------- 289 (591)
+||||||||+|+++...... ....+ .. +... ...+ +.+. .+ |.+...
T Consensus 457 ~Lk~kilik~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (885)
T 3ohm_B 457 DLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKS 536 (885)
T ss_dssp TTTTCEEEECCCCC------------------------------------------------------------------
T ss_pred HHcCcEEEEecCCCccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccc
Confidence 99999999999976421000 00000 00 0000 0000 0000 00 000000
Q ss_pred cc-----cc---CCCCCCCCCCCCCCCCCCCcc---------ccccccccchhhccceEeecccccCCcccccccCCCce
Q 007734 290 LK-----SL---NNSACDKDDFDGGVDNDEEDS---------DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKV 352 (591)
Q Consensus 290 ~~-----~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 352 (591)
.. .. ..+.+.+.+.+. +++++.+. ..+....++++|++|+.|+.+..+.+|...... ...+
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~eLS~LvvY~~~vkf~~f~~~~~~-~~~~ 614 (885)
T 3ohm_B 537 LGDEGLNRGPYVLGPADREDEEED-EEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKR-NKCF 614 (885)
T ss_dssp --------------------------------------CTTGGGTTCCCCCHHHHTTCSSCEECCCCCHHHHHHH-TCTT
T ss_pred cccccccccccccccccccccccc-ccccchhhhhccccccccccccchhhHHHHhHHhhhcCccCCCccccccc-CCcc
Confidence 00 00 000000000000 00000000 011223578899999988777666666543322 2457
Q ss_pred eEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeeeeeecCc
Q 007734 353 RRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGG 432 (591)
Q Consensus 353 ~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~ 432 (591)
+|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.||+
T Consensus 615 ~~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~ 694 (885)
T 3ohm_B 615 EMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGR 694 (885)
T ss_dssp EEEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHHTTGGG
T ss_pred eECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccCCCCCCchhhcccCceeeeecCCCCCcccchhhhhhccCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcccCCCCCCCccCCCCCC----CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCce-ee
Q 007734 433 CGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MK 507 (591)
Q Consensus 433 cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~-k~ 507 (591)
|||||||++||+.. ..|+|.... +++.+|+|+||+|++|+. ..+||||+|++.|.|.|.. ++
T Consensus 695 cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~----------~~~DPYV~V~l~g~p~D~~~k~ 761 (885)
T 3ohm_B 695 SGYLLKPEFMRRPD---KSFDPFTEVIVDGIVANALRVKVISGQFLSD----------RKVGIYVEVDMFGLPVDTRRKY 761 (885)
T ss_dssp CSEEECCGGGTCTT---CCCCTTCSSCCTTCCCEEEEEEEEEEESCCS----------SCCCEEEEEEEESSTTTCBCCC
T ss_pred eeeeecCHHHcCCC---cCcCCCcCcccCcccceEEEEEEEEeccCcc----------cCCCcEEEEEEeCCCcccccce
Confidence 99999999999863 368886532 246789999999999953 1479999999999988864 57
Q ss_pred eccccCCC-CCCccCc-EEEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEE
Q 007734 508 KTKTLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKL 584 (591)
Q Consensus 508 kTkvi~nn-~NPvWNE-tf~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asL 584 (591)
||+++.+| +||+||| +|.|. |..|++++|+|.|||+| ++|||++++||++|++|||||||+|..|+++..|+|
T Consensus 762 kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~GyR~vpL~~~~g~~l~~atL 837 (885)
T 3ohm_B 762 RTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPAL 837 (885)
T ss_dssp CCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCCEEEEEEEECTTSCEEEEEEE
T ss_pred eeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCCCceEEEecCCCCCccCceEE
Confidence 99999876 9999999 69998 88999999999999987 789999999999999999999999999999999999
Q ss_pred EEEEEE
Q 007734 585 LMHFEF 590 (591)
Q Consensus 585 lv~i~f 590 (591)
||||++
T Consensus 838 fv~i~~ 843 (885)
T 3ohm_B 838 LIYTEA 843 (885)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-28 Score=244.83 Aligned_cols=138 Identities=19% Similarity=0.363 Sum_probs=119.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc-------------
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM------------- 174 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl------------- 174 (591)
...+++||+||+|..+||||++|+ ...+++||.+|||+||||||+++.++...|+||.++
T Consensus 21 ~~~~~~pls~~T~~g~HNSY~~g~-------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~as~~~ 93 (339)
T 3h4x_A 21 MEPAATTYGTSTSVGVHNAYEKEK-------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANAS 93 (339)
T ss_dssp ----CCBTTSEEEEEETTTTCTTT-------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCSSGG
T ss_pred CCcccCccccceEeeccccccccC-------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccccccccccccccc
Confidence 357899999999999999999997 357799999999999999999876677999999875
Q ss_pred -----cccchHHHHHHHHhhhc-cccCCCceEEeeccCCCHHHH-----HHHHHHHHHHhhccccCCCC-----CCC---
Q 007734 175 -----TAPVELIKCLRSIKEYA-FVASEYPVVITLEDHLTPDLQ-----AKVAEMVTQTLGEILFTPGS-----ECL--- 235 (591)
Q Consensus 175 -----ts~i~f~dvi~aI~~~A-F~~S~yPvILSlE~Hcs~~qQ-----~~ma~~l~~~~Gd~L~~~~~-----~~~--- 235 (591)
|+.++|.+||+.||+++ |..++|||||.||.|++...| .+++++++++||++||+|.. +.+
T Consensus 94 dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL~eA 173 (339)
T 3h4x_A 94 ELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEA 173 (339)
T ss_dssp GTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSHHHH
T ss_pred ccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCHHHH
Confidence 67899999999999999 889999999999999987665 88999999999999999863 222
Q ss_pred ---CCCCChhhccccEEEec
Q 007734 236 ---KEFPSPESLKRRIIIST 252 (591)
Q Consensus 236 ---~~lPSP~~Lk~KIlik~ 252 (591)
..+|||++|||||||--
T Consensus 174 Vla~GWPSl~slRGKVlf~L 193 (339)
T 3h4x_A 174 VRAGGWPSRADLAGKFLFEL 193 (339)
T ss_dssp HHHHCCCBTGGGTTCEEEEE
T ss_pred HhcCCCCChHHhCCCEEEEE
Confidence 24999999999999864
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.3e-17 Score=147.62 Aligned_cols=118 Identities=21% Similarity=0.283 Sum_probs=99.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---ela~Lr 537 (591)
...|.|+|++|++|+. .+. +.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ ....|+
T Consensus 6 ~g~L~v~v~~a~~L~~------~~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~ 73 (140)
T 2dmh_A 6 SGMLRVIVESASNIPK------TKF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLG 73 (140)
T ss_dssp CCEEEEEEEEEESCCC------CSS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEE
T ss_pred CcEEEEEEEEeeCCCC------CCC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEE
Confidence 4679999999999964 233 6789999999875 468999999999999999999999765 347899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc------ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G------yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|.|||+|..+++++||++.++|..|..| |+++||.+..+... .++|.|++.|.
T Consensus 74 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~-~G~l~l~~~~~ 132 (140)
T 2dmh_A 74 IIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDT-GATIDLVIGYD 132 (140)
T ss_dssp EEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEE-EEEEEEEEEEC
T ss_pred EEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCC-CCEEEEEEEEE
Confidence 9999999888899999999999999776 44466998887654 47999999874
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=148.78 Aligned_cols=120 Identities=21% Similarity=0.342 Sum_probs=102.9
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
....|.|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ..|+|.
T Consensus 11 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~-~~l~i~ 78 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVT 78 (133)
T ss_dssp CSEEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEE
T ss_pred CceEEEEEEEeeECCCC------CCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEEecCCC-CEEEEE
Confidence 45779999999999964 24457799999999865 4779999999999999999999997553 679999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|||+|..+++++||++.++|..+..|. +|++|.++.++....++|.|+++|+
T Consensus 79 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 79 VFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 999998878999999999999999886 5789998877666678999999874
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=146.82 Aligned_cols=126 Identities=25% Similarity=0.342 Sum_probs=99.9
Q ss_pred CCCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC--ceeeeccccCCCCCCccCcEEEEeeecCCccE
Q 007734 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL 535 (591)
Q Consensus 458 ~p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d--~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~ 535 (591)
.+....|+|+|++|++|+. .+..+.+||||+|.+.+. .+ ..++||++++++.||+|||+|.|.+..+ ...
T Consensus 16 ~~~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~ 87 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAK------KDILGASDPYVRVTLYDP-MNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHR 87 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------------CCEEEEEEEEET-TTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCE
T ss_pred CCCccEEEEEEEEeeCCCC------CCCCCCCCcEEEEEEECC-CCccceeeeCccccCCCCCCCCCEEEEEecCC-CCE
Confidence 3446789999999999963 244567899999999852 22 3577999999999999999999998765 467
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccCCcc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---------R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|+|.|||+|..+++++||++.++|..|..+. +|++|....+..-..+.|.+.+.|+
T Consensus 88 l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 88 LLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9999999998888999999999999996542 8999987665555568999999885
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.1e-16 Score=140.97 Aligned_cols=119 Identities=17% Similarity=0.281 Sum_probs=97.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+. ..++||+++++++||+|||+|.|.+..++ .|.|.|
T Consensus 4 ~~~L~V~v~~a~~L~~------~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v 72 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAK------KDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISV 72 (132)
T ss_dssp EEEEEEEEEEEESCCC------CSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEE
T ss_pred eEEEEEEEEEeECCCC------CCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEE
Confidence 3569999999999953 345678999999998542 36789999999999999999999997764 399999
Q ss_pred EeccCCCC---CCccEEEEEECCcc----CCcceEEEccCCCC--CcccCeEEEEEEEE
Q 007734 541 HEYDMSEK---DDFGGQTCLPVSEL----KQGIRAVPLHDRKG--ERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~---dd~lGq~~ipL~sL----~~GyR~vpL~d~~g--~~~~~asLlv~i~f 590 (591)
||+|..++ ++|||++.+|+..| ..|+++++|....+ ..-..+.|.|++..
T Consensus 73 ~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 73 WNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 99998765 79999999999998 78899999987643 22345789888764
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=6.8e-16 Score=142.20 Aligned_cols=118 Identities=27% Similarity=0.380 Sum_probs=99.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
...|.|+|++|++|+. .+..+.+||||+|.+. ..++||++++++.||+|||+|.|.+..++ ..|+|.|
T Consensus 16 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v 83 (148)
T 3kwu_A 16 SAKISITVVCAQGLQA------KDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRV 83 (148)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEE
T ss_pred ccEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEE
Confidence 4679999999999964 2445789999999984 36789999999999999999999997765 6799999
Q ss_pred EeccCC-----------CCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~-----------~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|.. +++++||++.+||..+..+. +|++|....+.....+.|.|++.|
T Consensus 84 ~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 84 LDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISV 145 (148)
T ss_dssp EECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEE
T ss_pred EECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEE
Confidence 999975 67999999999999997665 689998766665566789988876
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=140.08 Aligned_cols=116 Identities=22% Similarity=0.373 Sum_probs=92.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..++...|+|.||
T Consensus 3 ~~L~v~v~~a~~L~~~---~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~ 77 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEeeeCCCCC---CccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEE
Confidence 5699999999999630 001345778999999987643 36789999999999999999999998777889999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcceE---EEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR~---vpL~d~~g~~~~~asLlv~i~f 590 (591)
|+|..+ +++||++.+||..|..|+++ ++|.+ .+++.++|.+
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~-------~~~g~i~~~l 121 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ-------VTEMVLEMSL 121 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT-------TEEEEEEEEE
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCC-------CceEEEEEEE
Confidence 999764 89999999999999999864 56653 2455555543
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=145.46 Aligned_cols=124 Identities=25% Similarity=0.342 Sum_probs=97.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+... ...|+|.
T Consensus 7 ~g~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~ 79 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAK------KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFE 79 (176)
T ss_dssp CEEEEEEEEEEESCC---------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEE
T ss_pred cEEEEEEEEEeeCCCC------cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEE
Confidence 4679999999999964 244577999999999863221 1467999999999999999999998744 4689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy---------R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|||+|..+++++||++.+||..|..+. +|++|....++....+.|.|++.|+
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp EEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence 999998888999999999999997652 6899987666665668999999885
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=137.34 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=87.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCC--ccEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pe--la~Lrf 538 (591)
..|.|+|++|++|+. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...+ ...|+|
T Consensus 20 ~~L~V~V~~a~~L~~-------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~ 92 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-------EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL 92 (134)
T ss_dssp TEEEEEEEEEECCCC-------TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred CEEEEEEEEeeCCCC-------CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence 569999999999963 23467899999999754444567899999999999999999999 76543 368999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 574 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~ 574 (591)
.|||+|..+++++||++.+||..+..|. +|.+|.+.
T Consensus 93 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 93 SVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 9999998888999999999999998764 57787653
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.3e-16 Score=142.01 Aligned_cols=113 Identities=20% Similarity=0.220 Sum_probs=94.3
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~ 88 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKA------MDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIII 88 (138)
T ss_dssp TTEEEEEEEEEESCCC------CBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEE
T ss_pred CCeEEEEEEEeeCCCC------cCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEE
Confidence 4569999999999964 244567899999999875444567899999999999999999999887765 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.++|+++..|++ |.+|.+..|+++
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 89 TVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPV 130 (138)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCE
T ss_pred EEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeE
Confidence 99999988889999999999999887775 567777666654
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=136.57 Aligned_cols=116 Identities=22% Similarity=0.332 Sum_probs=95.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++ ++.||+|||+|.|.+.. ....|+|.
T Consensus 9 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~ 76 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEE
T ss_pred cEEEEEEEEeccCCCC------cccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEE
Confidence 5679999999999964 24457799999999865 367999998 78999999999999876 45689999
Q ss_pred EEeccCCCCCCccEEEEEECCcc-CCc---ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSEL-KQG---IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL-~~G---yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|||+|..+++++||++.++|..+ ..| .+|++|. ..++ ..+.|.+.+.|.
T Consensus 77 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~--~~G~i~l~l~~~ 129 (136)
T 1wfj_A 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE--YKGEIWVALSFK 129 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE--EEEEEEEEEEEE
T ss_pred EEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc--cCEEEEEEEEEE
Confidence 99999888899999999999999 555 4688988 4443 346888888773
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=139.01 Aligned_cols=106 Identities=23% Similarity=0.276 Sum_probs=89.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.. .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 41 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 112 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 112 (152)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEeECCCC------ccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEE
Confidence 4579999999999964 24457789999999874 33457899999999999999999999876544 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 574 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~ 574 (591)
.|||+|..+++++||++.++|..+..|. +|.+|.+.
T Consensus 113 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 113 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred EEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 9999998888999999999999998874 57888764
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-15 Score=143.65 Aligned_cols=118 Identities=19% Similarity=0.232 Sum_probs=95.2
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
...+|.|+|++|++|+.. .+ .+.+||||+|.+.+ .++||+++++++||+|||+|.|.+. +...|+|.
T Consensus 34 ~~~~L~V~V~~A~~L~~~-----~~-~~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~ 100 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENK-----KN-WFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFR 100 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--------CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEE
T ss_pred CceEEEEEEEEeECCCCc-----cc-CCCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEE
Confidence 356799999999999621 12 23489999999865 6789999999999999999999884 36789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--------ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQG--------IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~G--------yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|||+|..+++++||++.++|..|..| ..|++|....+.....+.|.|.+++
T Consensus 101 V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 101 VWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99999888899999999999998654 2488998765544455788888875
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-15 Score=143.57 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=88.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCcc--EEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela--~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 36 ~~~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 109 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 109 (166)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeECCCC------ccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEE
Confidence 4579999999999964 2445778999999998654445688999999999999999999999776654 8999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGER 578 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~ 578 (591)
.|||+|..+++++||++.++|.++..+++ |.+|.+..+++
T Consensus 110 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~ 150 (166)
T 2cm5_A 110 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 150 (166)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred EEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCc
Confidence 99999988889999999999999765543 34554444443
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=139.41 Aligned_cols=118 Identities=19% Similarity=0.122 Sum_probs=91.5
Q ss_pred CceeEEEEEEeccccCcCCCC-C---ccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPH-T---HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL 535 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~-~---~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~ 535 (591)
....|+|+|+.|++|+..... . .....+.+||||+|.+.+ ....||+++++++||+|||+|.|.+.. ...
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~ 100 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCANVTD--GGH 100 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEE--ECE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEEcCC--CCE
Confidence 356899999999999631000 0 000124689999999854 234689999999999999999999864 458
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccCCc-------ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G-------yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|.|||+|..+++++||.+.|||..|..| -.|++|.. .+.|.|+++|
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~ 155 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITL 155 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEE
Confidence 999999999888899999999999998754 36889853 4688888887
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
Probab=99.58 E-value=9.3e-16 Score=142.20 Aligned_cols=113 Identities=19% Similarity=0.146 Sum_probs=88.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 29 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v 102 (153)
T 1w15_A 29 TNTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 102 (153)
T ss_dssp TTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEE
Confidence 4579999999999964 244567899999999763222346799999999999999999999987765 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.++|++...|++ |.+|.+..++++
T Consensus 103 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~ 144 (153)
T 1w15_A 103 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 144 (153)
T ss_dssp EEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCee
Confidence 99999988889999999999999766664 556766555553
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=6.6e-15 Score=134.07 Aligned_cols=112 Identities=17% Similarity=0.243 Sum_probs=90.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pel--a~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+ ...++ ..|+
T Consensus 20 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 93 (141)
T 1v27_A 20 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 93 (141)
T ss_dssp TTEEEEEEEEEESCCC------CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEE
T ss_pred CCEEEEEEEEccCCCC------cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEE
Confidence 3579999999999964 2445778999999987544445678999999999999999999995 43433 6899
Q ss_pred EEEEeccCCCC--CCccEEEEEECCccCCc--ceEEEccCCCCCc
Q 007734 538 IEVHEYDMSEK--DDFGGQTCLPVSELKQG--IRAVPLHDRKGER 578 (591)
Q Consensus 538 f~V~D~d~~~~--dd~lGq~~ipL~sL~~G--yR~vpL~d~~g~~ 578 (591)
|.|||+|..++ +++||++.++|..+... -+|.+|.+.+..+
T Consensus 94 i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 94 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGP 138 (141)
T ss_dssp EEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCC
T ss_pred EEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCC
Confidence 99999998776 89999999999997533 3689998765543
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-15 Score=135.37 Aligned_cols=107 Identities=23% Similarity=0.379 Sum_probs=87.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pel--a~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...++ ..|+
T Consensus 28 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 101 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKP------MDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLR 101 (142)
T ss_dssp GTEEEEEEEEEESCCC------CCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEE
T ss_pred CCEEEEEEEEecCCCC------CCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEE
Confidence 4579999999999964 244577899999999864444568899999999999999999998 554443 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
|.|||+|..+++++||++.+||..|..|. .+++|..
T Consensus 102 i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 102 ISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999998888999999999999998764 3456643
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.8e-15 Score=134.98 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=88.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+ +||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 23 ~~~L~v~v~~a~~L~~------~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 95 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIA------FSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDV 95 (142)
T ss_dssp TTEEEEEEEEEECCCC------SSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEE
T ss_pred CCEEEEEEEEeECCCC------CCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEE
Confidence 4569999999999964 24456 899999999754444467899999999999999999999866554 38999
Q ss_pred EEEeccCCCC--CCccEEEEEECCccCCc---ceEEEccCCCCC
Q 007734 539 EVHEYDMSEK--DDFGGQTCLPVSELKQG---IRAVPLHDRKGE 577 (591)
Q Consensus 539 ~V~D~d~~~~--dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~ 577 (591)
.|||+|..+. +++||++.++|..+..+ -+|.+|.+..++
T Consensus 96 ~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 96 AVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp EEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred EEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 9999997653 57999999999998654 357888876544
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.3e-15 Score=137.84 Aligned_cols=112 Identities=19% Similarity=0.242 Sum_probs=90.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+. .+ ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 22 ~~~L~V~v~~a~~L~~------~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~ 95 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAY------ADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQ 95 (148)
T ss_dssp TTEEEEEEEEEESCCC------SBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEE
T ss_pred CCEEEEEEEEecCCCC------cccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEE
Confidence 4579999999999963 12 3567899999999764444557899999999999999999999887665 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGER 578 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~ 578 (591)
|.|||+|..+++++||++.+||..+..+. +|++|..+.+..
T Consensus 96 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~ 139 (148)
T 3fdw_A 96 FSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAE 139 (148)
T ss_dssp EEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC----
T ss_pred EEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccccc
Confidence 99999998888999999999999997553 689998766554
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.5e-15 Score=135.31 Aligned_cols=105 Identities=23% Similarity=0.281 Sum_probs=87.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 104 (143)
T 3f04_A 33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEECCCC------BGGGBCCCEEEEEEEES--CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEecCCCC------CCCCCCcCcEEEEEEEC--CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence 4579999999999964 24456789999999853 33457899999999999999999999876654 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
.|||+|..+++++||++.++|..+..|. .|.+|..
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred EEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999998888999999999999998874 4677753
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=7.9e-15 Score=135.39 Aligned_cols=107 Identities=26% Similarity=0.421 Sum_probs=90.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|.|
T Consensus 31 ~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 104 (149)
T 1a25_A 31 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 104 (149)
T ss_dssp SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEEeeCCCC------CCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEE
Confidence 469999999999964 244577899999999865444567899999999999999999999876554 5899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc--eEEEccCC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDR 574 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~Gy--R~vpL~d~ 574 (591)
||+|..+++++||++.++|..|..+- +|.+|.+.
T Consensus 105 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 105 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred EECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 99998888999999999999997653 57899764
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=6e-15 Score=134.18 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=88.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-------CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 533 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-------~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel 533 (591)
...|+|+|++|++|+... .... ..+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+
T Consensus 5 ~g~L~v~v~~a~~L~~~d--~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~v~~~-- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTA--WSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG-- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCH--HHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--
T ss_pred ceEEEEEEEeCcCCCCcc--cccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEEecCC--
Confidence 357999999999996310 0000 012389999999853 2346899999999999999999998754
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCCc-----ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 534 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
..|+|.|||+|..+++++||.+.+||..+..+ -.|++|.. .+.|.++++|
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~ 131 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDL 131 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEE
Confidence 78999999999888899999999999998753 24666642 4578888776
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=132.54 Aligned_cols=106 Identities=21% Similarity=0.243 Sum_probs=86.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---ela~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+ ....|+
T Consensus 25 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 96 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILY 96 (141)
T ss_dssp SCCEEEEEEEEESCCC------CSSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEE
T ss_pred CCEEEEEEEEeECCCC------CCCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEE
Confidence 4569999999999964 24457789999999974 334578999999999999999999985322 136899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 574 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~ 574 (591)
|.|||+|..+++++||++.+||..|..|. +|++|...
T Consensus 97 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 97 LQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 99999998888999999999999998775 57788654
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-14 Score=130.55 Aligned_cols=106 Identities=20% Similarity=0.200 Sum_probs=86.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++. +..+.+||||+|.+.+. ....++||+++++++||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~~---------d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~ 94 (138)
T 1wfm_A 25 KAELFVTRLEAVTS---------NHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECC---------CCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEEEcC---------CCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEE
Confidence 45799999999832 34577899999998641 22346799999999999999999999877665 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEccCCCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 576 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g 576 (591)
.|||+|..+++++||++.+||..+..+ -.|.+|.+...
T Consensus 95 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred EEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 999999888899999999999999643 36889987544
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-15 Score=139.24 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=86.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+.+...+ ..++||+++++++||+|||+|.|.+...++ ..|+
T Consensus 42 ~~~L~V~Vi~a~~L~~------~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~ 115 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSA------LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLR 115 (155)
T ss_dssp TTEEEEEEEEEECGGG------TCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEE
T ss_pred CCEEEEEEEEccCcCC------cccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEE
Confidence 4579999999999964 245677999999999764333 247899999999999999999999876543 5799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCC-c---ceEEEcc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQ-G---IRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~-G---yR~vpL~ 572 (591)
|.|||+|..+++++||++.++|..+.. | -+|.+|.
T Consensus 116 ~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 116 VDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999998889999999999999953 2 3566764
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.7e-15 Score=138.44 Aligned_cols=101 Identities=20% Similarity=0.278 Sum_probs=83.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 97 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (159)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence 4579999999999964 244577899999999763333357899999999999999999999877654 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR 567 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR 567 (591)
.|||+|..+++++||++.+++.++..|++
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~ 126 (159)
T 1tjx_A 98 TVLDYDKIGKNDAIGKVFVGYNSTGAELR 126 (159)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHH
T ss_pred EEEECCCCCCCceEEEEEECCCCCCcHHH
Confidence 99999988889999999999998755543
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-15 Score=136.85 Aligned_cols=109 Identities=19% Similarity=0.305 Sum_probs=89.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC---------ceeeeccccCCCCCCccCcEEEEe-eecC
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFP-LSVP 531 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d---------~~k~kTkvi~nn~NPvWNEtf~F~-v~~p 531 (591)
..|.|+|++|++|+. .+..+.+||||+|.+.+.+.. ..++||++++++.||+|||+|.|. +...
T Consensus 18 ~~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 91 (142)
T 1rh8_A 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEecCCCC------CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH
Confidence 469999999999964 244678899999999864432 236799999999999999999997 6543
Q ss_pred C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc---ceEEEccCCCC
Q 007734 532 E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 576 (591)
Q Consensus 532 e--la~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g 576 (591)
+ ...|+|.|||+|..+++++||++.+||..+..+ -+|.+|.+..+
T Consensus 92 ~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred HccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 3 358999999999888899999999999998654 58999987654
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-14 Score=133.91 Aligned_cols=110 Identities=18% Similarity=0.193 Sum_probs=89.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 539 (591)
...|.|+|++|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 26 ~~~L~V~v~~a~~L~~------~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~ 98 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLIS------KQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVT 98 (153)
T ss_dssp SSEEEEEEEEEESCCC------CS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEE
T ss_pred CCEEEEEEEEeeCCCC------CC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEE
Confidence 4679999999999964 13 367899999999865555667899999999999999999999854444 469999
Q ss_pred EEeccCCCC-CCccEEEEEECCccCC-c---ceEEEccCCCCC
Q 007734 540 VHEYDMSEK-DDFGGQTCLPVSELKQ-G---IRAVPLHDRKGE 577 (591)
Q Consensus 540 V~D~d~~~~-dd~lGq~~ipL~sL~~-G---yR~vpL~d~~g~ 577 (591)
|||+|..++ +++||++.+||+.|.. + -.|.+|.+....
T Consensus 99 V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 99 VWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp EEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred EEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 999998766 8999999999999974 3 368899875543
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-14 Score=128.97 Aligned_cols=105 Identities=20% Similarity=0.331 Sum_probs=85.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCCc--cEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pel--a~L 536 (591)
...|.|+|++|++|+. .+.. +.+||||+|.+.+ ....++||++++++.||+|||+|.|. +...++ ..|
T Consensus 21 ~~~L~v~v~~a~~L~~------~d~~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l 92 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPA------MDEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCC------CBTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCCEEEEEEec--CCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEE
Confidence 4569999999999964 2343 6789999999874 23468899999999999999999995 765554 589
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCCc--c--eEEEccC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQG--I--RAVPLHD 573 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~~G--y--R~vpL~d 573 (591)
+|.|||+|..+++++||++.+||..|..+ . .|.+|..
T Consensus 93 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 93 HFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999999888899999999999999765 3 2456653
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=128.05 Aligned_cols=105 Identities=18% Similarity=0.239 Sum_probs=80.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeee-cCC--ccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPE--LALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~-~pe--la~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+. ..+ ...|+
T Consensus 17 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 90 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 90 (129)
T ss_dssp TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEE
Confidence 3569999999999964 24456789999999976444467889999999999999999999953 332 36899
Q ss_pred EEEEeccCCCC--CCccEEEEEECCccCC-c-ceEEEc
Q 007734 538 IEVHEYDMSEK--DDFGGQTCLPVSELKQ-G-IRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~--dd~lGq~~ipL~sL~~-G-yR~vpL 571 (591)
|.|||+|..++ +++||++.+||..+.. | -+|.+|
T Consensus 91 ~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 91 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 99999998776 8999999999998753 3 246666
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-14 Score=130.60 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=86.0
Q ss_pred ceeEEEEEEeccccCcC-CCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYD-FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~-~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+.. ......+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP--DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET--CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe--CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 45799999999999641 0000012346789999999874 22357899999999999999999999876554 3899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
|.|||+|..+++++||++.++|..+..+- .|.+|..
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999998888999999999999986543 4556654
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=136.00 Aligned_cols=108 Identities=20% Similarity=0.184 Sum_probs=87.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCC-CCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~-~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
..|.|+|+.|++|+. .+. .+.+||||+|.+.+......++||+++++++||+|||+|.|.+.. +...|+|.|
T Consensus 30 ~~L~V~v~~a~~L~~------~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V 102 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQ------KPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIV 102 (171)
T ss_dssp TEEEEEEEEEESCCC------CC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEE
T ss_pred CEEEEEEEEeeCCCC------CCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEE
Confidence 469999999999964 232 467899999999863333357899999999999999999999854 457899999
Q ss_pred E-eccCCCCCCccEEEEEECCccCCcc---eEEEccCCCC
Q 007734 541 H-EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 576 (591)
Q Consensus 541 ~-D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g 576 (591)
| |+|..+++++||++.++|..+..|. +|.+|.....
T Consensus 103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 103 WGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSS 142 (171)
T ss_dssp EEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGGG
T ss_pred EEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCccc
Confidence 9 9998888999999999999997553 6889976543
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.7e-13 Score=137.96 Aligned_cols=122 Identities=21% Similarity=0.270 Sum_probs=96.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..+++|+++++++||+|||+|.|.+..+++ ..|+|
T Consensus 18 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~ 89 (284)
T 2r83_A 18 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVM 89 (284)
T ss_dssp TTEEEEEEEEEECCCC------CSSSSSCCEEEEEEEET--CTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCeEEEEEEEc--CCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEE
Confidence 4579999999999964 24457799999999874 22357789999999999999999999877654 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCC-cccCeEEEEEEEE
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEF 590 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~-~~~~asLlv~i~f 590 (591)
.|||+|..+++++||++.++|..+..|. .|.+|.+..+. ....+.|.+.+.+
T Consensus 90 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~ 145 (284)
T 2r83_A 90 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRY 145 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEE
T ss_pred EEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEe
Confidence 9999998888999999999999997763 57899876543 2233456655544
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-13 Score=123.45 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=95.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
.+-|+|.|.++.+|+ +.+|||++|.+.| .++||++++ ++.||+|||+|+|++..+-. .+|.
T Consensus 20 ~msL~V~l~~a~~Lp-----------g~~Dp~akv~FRg-----~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~ 83 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----------GRADRIAKVTFRG-----QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLE 83 (144)
T ss_dssp CEEEEEEEEEEESCC-----------SCEEEEEEEEETT-----EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEE
T ss_pred cEEEEEEEEEecCCC-----------CCCCCeEEEEEec-----cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEE
Confidence 466999999999995 3579999999976 688999998 58999999999999876433 6899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEE
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|+|++..+++.+||++++||..+..+-+ ..+|.|.++++++ |+|.+.+.+
T Consensus 84 v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~-a~I~l~l~Y 138 (144)
T 3l9b_A 84 IQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK-TSLSMEVRY 138 (144)
T ss_dssp EEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE-EEEEEEEEE
T ss_pred EEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc-cEEEEEEEe
Confidence 999999999999999999999998865432 4699999999986 788777665
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-13 Score=122.72 Aligned_cols=111 Identities=22% Similarity=0.234 Sum_probs=79.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
..|.|+|+.|++++. .+.+||||+|. + ...||+++. ++.||+|||+|.|.+..++. .|+|.|
T Consensus 5 ~~L~V~V~~A~~l~~---------~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V 67 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV 67 (131)
T ss_dssp EEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCCSS-EEEEEE
T ss_pred eEEEEEEEEeECCCC---------CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCCCC-eEEEEE
Confidence 569999999997631 35689999998 2 234566655 57999999999999986554 599999
Q ss_pred EeccCCCCCCccEEEEEECCccCC----c-ceEEEcc----CCCCCcc-----cCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQ----G-IRAVPLH----DRKGERY-----KSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~----G-yR~vpL~----d~~g~~~-----~~asLlv~i~f 590 (591)
||+| .++|++||++.+||+.+.. | +++.||. .++|+.. ...++++.+.|
T Consensus 68 ~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 68 WNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 9999 7789999999999999842 3 2555553 3444432 23467777766
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.40 E-value=9e-13 Score=135.42 Aligned_cols=122 Identities=22% Similarity=0.266 Sum_probs=94.3
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCcc--EEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela--~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+. |....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 19 ~~~L~v~v~~a~~L~~------~d~~g~~dPyv~v~l~--~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 90 (296)
T 1dqv_A 19 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLL--PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 90 (296)
T ss_dssp SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECT--TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCcCeEEEEEEE--cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence 4569999999999964 2446779999999885 3334678999999999999999999998776654 7999
Q ss_pred EEEeccCCCCCCccEEEEEE-CCccC---Cc-ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 539 EVHEYDMSEKDDFGGQTCLP-VSELK---QG-IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ip-L~sL~---~G-yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
.|||+|..+++++||++.++ +..+. .+ -.|.+|....+.....+.|.+.+.+
T Consensus 91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y 147 (296)
T 1dqv_A 91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCY 147 (296)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEE
T ss_pred EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEe
Confidence 99999988889999999996 43332 22 3578887765555445667666554
|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
Probab=99.39 E-value=9.9e-13 Score=144.71 Aligned_cols=114 Identities=21% Similarity=0.339 Sum_probs=94.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+....|+|.|
T Consensus 386 ~~~l~v~v~~a~~L~~------~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v 454 (510)
T 3jzy_A 386 IGRLMVHVIEATELKA------CKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTL 454 (510)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEE
T ss_pred CceEEEEeceeecCCC------CCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 4679999999999953 24567899999999843 578999999999999999999999877778899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc-------eEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGI-------RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~Gy-------R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..+++++||++.+||+.|..|. .|++|... ..+.|.|++++
T Consensus 455 ~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l 506 (510)
T 3jzy_A 455 FDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDL 506 (510)
T ss_dssp EECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEE
T ss_pred EeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEE
Confidence 99999888999999999999997653 57787654 23567776664
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.7e-13 Score=135.00 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=82.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 149 ~~~l~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 222 (284)
T 2r83_A 149 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 222 (284)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEE
T ss_pred CCceEEEEEEeECCCC------cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEE
Confidence 3569999999999964 244577899999998753333356799999999999999999999987765 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
.|||+|..+++++||++.++++++..|+
T Consensus 223 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~ 250 (284)
T 2r83_A 223 TVLDYDKIGKNDAIGKVFVGYNSTGAEL 250 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCHHHH
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCCcHH
Confidence 9999998888999999999999865543
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-12 Score=122.89 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=69.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
...|.|+|+.|++++. .+.+||||+|. + ...||+++. ++.||+|||+|.|.+..++. .|+|.
T Consensus 13 ~~~L~V~V~~A~~l~~---------~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~ 75 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRLDL-GLTVE 75 (167)
T ss_dssp CCEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCTTS-EEEEE
T ss_pred eEEEEEEEEEEECCCC---------CCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCCCC-EEEEE
Confidence 3579999999997631 35689999998 2 235677765 57999999999999986544 59999
Q ss_pred EEeccCCCCCCccEEEEEECCccC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|||+| .++|++||++.|||..+.
T Consensus 76 V~D~d-~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 76 VWNKG-LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp EEECC-SSCCEEEEEEEEEGGGSC
T ss_pred EEECC-CCCCceEEEEEEEHHHhc
Confidence 99999 778999999999999984
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=136.22 Aligned_cols=119 Identities=19% Similarity=0.236 Sum_probs=91.0
Q ss_pred eeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCce
Q 007734 426 MFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV 505 (591)
Q Consensus 426 ~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~ 505 (591)
.-...+.|=-|.||-..... +..........|+|+|+.|++|+. |.++.+||||+|.+.+ .
T Consensus 365 ~~l~g~~C~C~C~~~~~t~~-------~~C~~~~~~~~L~V~V~~A~~L~~-------D~~g~sDPYV~v~l~~-----~ 425 (540)
T 3nsj_A 365 HKSSHDSCQCECQDSKVTNQ-------DCCPRQRGLAHLVVSNFRAEHLWG-------DYTTATDAYLKVFFGG-----Q 425 (540)
T ss_dssp EECSSCTTCEEESCTTTBCG-------GGCBSSTTEEEEEEEEEEEESCCC-------SSCSCCCEEEEEEETT-----E
T ss_pred ccCCCCceEeeCCCCCCccc-------ccccccCcccEEEEEEEEccCCCc-------ccCCCcCeEEEEEECC-----E
Confidence 33344568888888644322 111111124679999999999942 4567899999999864 4
Q ss_pred eeeccccCCCCCCccCcEEEEeee-cCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 506 MKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 506 k~kTkvi~nn~NPvWNEtf~F~v~-~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
+.||+++++++||+|||+|.|.+. .+....|+|.|||+|..+++|+||++.++|. .|-
T Consensus 426 ~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g~ 484 (540)
T 3nsj_A 426 EFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SGF 484 (540)
T ss_dssp EEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SEE
T ss_pred eeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CCc
Confidence 689999999999999999999864 4456789999999998888999999999987 464
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-12 Score=147.31 Aligned_cols=117 Identities=24% Similarity=0.356 Sum_probs=90.3
Q ss_pred ccCCCCCC----CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEE
Q 007734 451 VFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 526 (591)
Q Consensus 451 ~f~p~~~~----p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F 526 (591)
.|||.... +....|+|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||+++++++||+|||+|.|
T Consensus 3 ~fdP~~~~~ve~~~~g~L~V~Vi~A~nL~~~---~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F 77 (749)
T 1cjy_A 3 FIDPYQHIIVEHQYSHKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEF 77 (749)
T ss_dssp ----------CCCCCEEEEEEEEEEECCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEE
T ss_pred CCCCCccccccCCCccEEEEEEEEEECCCCc---cccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEE
Confidence 46665432 2356899999999999530 002345779999999987643 36789999999999999999999
Q ss_pred eeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 527 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 527 ~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
.+..+....|+|.|||+|..+ +++||++.++|..|..|+ +|++|..
T Consensus 78 ~v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 78 ILDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 998877788999999999888 999999999999999887 4677764
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-12 Score=133.02 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 151 ~~~l~v~v~~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 224 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 224 (296)
T ss_dssp TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred cceeEEEEEEeecCCc------cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEE
Confidence 3569999999999953 244567899999998743233457899999999999999999999876654 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
.|||+|..+++++||++.++++++..
T Consensus 225 ~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 225 AVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred EEEeCCCCCCCceEEEEEECCccCCc
Confidence 99999988889999999999998754
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.98 E-value=4.3e-11 Score=131.34 Aligned_cols=99 Identities=19% Similarity=0.284 Sum_probs=10.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC---CCCccCcEEEEeeecCCccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN---WIPSWNEEFEFPLSVPELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn---~NPvWNEtf~F~v~~pela~Lr 537 (591)
.+.|+|+|+.|++|+. . .||||++.+.+ ..+.||++++++ .||+|||+|.|.+. +....|.
T Consensus 10 ~~~L~V~VieAk~L~~------~-----ddpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~ 73 (483)
T 3bxj_A 10 DNVLKLWIIEARELPP------K-----KRYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALR 73 (483)
T ss_dssp EECC------------------------------------------------------------CCEECC----------
T ss_pred ccEEEEEEEEcCCcCC------C-----CCCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEE
Confidence 4569999999999953 1 18999999865 235689999988 99999999999975 3357899
Q ss_pred EEEEec-c---CCCCCCccEEEEEECCccCCcc---eEEEccCCC
Q 007734 538 IEVHEY-D---MSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 575 (591)
Q Consensus 538 f~V~D~-d---~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~ 575 (591)
|.|||. | ..+++++||.+.||++.+..|. .|.||.++.
T Consensus 74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp ---------------------------------CCEECC------
T ss_pred EEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 999994 4 2567999999999999998763 578887654
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.98 E-value=5.4e-10 Score=127.45 Aligned_cols=107 Identities=26% Similarity=0.434 Sum_probs=88.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|.|+|+.|++|+. .+..+.+||||++.+.+.+....++||+++++++||+|||+|.|.+...+. ..|.|.|
T Consensus 172 ~~L~V~v~~a~~L~~------~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v 245 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEI 245 (674)
T ss_dssp SEEEEEEEEEESCCC------CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEE
T ss_pred ceeeeeeecccccCC------CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEE
Confidence 468999999999954 345678999999999876666678899999999999999999999876554 4599999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc--ceEEEccCC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDR 574 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~G--yR~vpL~d~ 574 (591)
||+|..++++++|.+.++|+.+..+ -.|.+|.+.
T Consensus 246 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~ 281 (674)
T 3pfq_A 246 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 281 (674)
T ss_dssp EECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBCT
T ss_pred eecccccccccccccccchhhhccCCcccceeeccc
Confidence 9999999999999999999988643 245666653
|
| >2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.8e-10 Score=112.24 Aligned_cols=136 Identities=13% Similarity=0.289 Sum_probs=102.2
Q ss_pred CCcccceeeeccCcccccCCCC-------CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-------~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi 184 (591)
+.||+++.|-.|||++..+... .+.+-...+..-|..|+|.++|+|++ +..++||... ...+|.||+
T Consensus 13 ~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~~-----~~~~~H~~~~-~~~~~~~~L 86 (274)
T 2plc_A 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIF-LNASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEE-EEEEHHHHH
T ss_pred CCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEECC-----cEEEEEcCCC-CCCCHHHHH
Confidence 4799999999999997655421 12333345678899999999999992 4789999653 467999999
Q ss_pred HHHhhhccccCCCceEEeeccCCCHHHH-HHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecC
Q 007734 185 RSIKEYAFVASEYPVVITLEDHLTPDLQ-AKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~Hcs~~qQ-~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 253 (591)
+.|+++.=..-.=.|||+|+++.+.+.. ..+++.+.+.||+.++.++. .....+|+.++++|||+|-..
T Consensus 87 ~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~pTL~e~rGK~vlv~~ 157 (274)
T 2plc_A 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHHHHhhceeecCcccccCCCCCCHHHhCCCEEEEEe
Confidence 9999985555445899999998754222 22345566899999998652 224679999999999999754
|
| >1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00039 Score=61.64 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=62.3
Q ss_pred CCCceEEEEEeccCCCceeeec-cccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCC--
Q 007734 488 PPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-- 564 (591)
Q Consensus 488 ~~DpyV~V~i~g~p~d~~k~kT-kvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~-- 564 (591)
..|||+.|.+.-.... .+.+| .+.+.+..|+|||+|.-.|. +...|.+.|+... .+|++.+++++..|..
T Consensus 26 ~lDPy~aV~vdE~~~~-e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a----~~fvAn~tV~~edL~~~c 98 (126)
T 1yrk_A 26 ANQPFCAVKMKEALST-ERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLMRAA----EEPVSEVTVGVSVLAERC 98 (126)
T ss_dssp SCCCEEEEEEEEEEEE-TTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEEEET----TEEEEEEEEEHHHHHHHH
T ss_pred cCCceEEEEeeeeEEc-ccceeecccCCCCCcCccceEEeeee--CCEEEEEEEEcCC----CCeeeEEEEEHHHHHhhh
Confidence 4799999887532110 12244 55677899999999988876 3567889998654 2899999999999862
Q ss_pred ----c--ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 565 ----G--IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 565 ----G--yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
| --||.|. + .+.|++.++++
T Consensus 99 ~~~~g~~e~WvdLe-P------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 99 KKNNGKAEFWLDLQ-P------QAKVLMSVQYF 124 (126)
T ss_dssp HTTTTEEEEEEECB-S------SCEEEEEEEEE
T ss_pred ccCCCceEEEEecc-c------CcEEEEEEEEe
Confidence 2 2366664 2 35677777653
|
| >3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00015 Score=74.13 Aligned_cols=136 Identities=11% Similarity=0.122 Sum_probs=90.4
Q ss_pred CCcccceeeeccCcccccCCCC-----CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQL-----NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-----~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
+.||+++.|=-|||++-..-.. .+..-......=|..|+|-+.|+|-..++ +...++||--.+ ..+|.||+..
T Consensus 20 ~~pl~~lsiPGTHdS~a~~~~~~~~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~e 97 (298)
T 3ea1_A 20 NIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPLYL-YVTLHEFINE 97 (298)
T ss_dssp TSBTTTSCEEEETTTTCTTCCSHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEECTT-SCEEEEETTEEE-EEEHHHHHHH
T ss_pred CCeeeeeeeccccccccccCCCchhhhcccCccccHHHHHhcCCeEEEEEeEecCC-CcEEEECCcccc-cCCHHHHHHH
Confidence 6799999999999986554210 00011112445688999999999965432 356799994332 4679999999
Q ss_pred HhhhccccCCCceEEeeccCCCH---HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccccEEEecC
Q 007734 187 IKEYAFVASEYPVVITLEDHLTP---DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~---~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (591)
|+++.=....==|||+|.+-=+. ......+.+++.+|++.++.+ ....|+..+.||||+|-.+
T Consensus 98 i~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~~----~~~~ptLge~RGKivll~r 163 (298)
T 3ea1_A 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFLK----TEGNIKLGDARGKIVLLKR 163 (298)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBCC----CCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCccccc----CCCCCcHHHhcCCEEEEEe
Confidence 99865433334488888663321 122334455667788765543 2456899999999999865
|
| >3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00014 Score=74.82 Aligned_cols=136 Identities=16% Similarity=0.225 Sum_probs=88.1
Q ss_pred CCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
+.||+++.|=-|||++-..-... ...-......=|..|+|-+.|+|...++ +..-++||-..+ ..+|.|||+.
T Consensus 16 ~~~l~~lsiPGTHdS~~~~~~~p~~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~~ 93 (306)
T 3v1h_A 16 GKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASAD-NMISVHHGMVYL-HHELGKFLDD 93 (306)
T ss_dssp TSBGGGSCEEEETTGGGGGCCCHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEEEET-TEEEEEETTEEE-EEEHHHHHHH
T ss_pred CCEeecceeccccchhhccCCCcccchhhccCCCCHHHHHHhCcceEEEEeeecCC-CcEEEEccCccc-CCcHHHHHHH
Confidence 68999999999999876532100 0111122467788999999999964322 346789985322 5789999999
Q ss_pred HhhhccccCCCceEEeeccCCCH--HHHHHHHHHHHHH-h-----hccccCCCCCCCCCCCChhhccccEEEecC
Q 007734 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQT-L-----GEILFTPGSECLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~-~-----Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (591)
|+++-=....=-|||+|+..-+. ..+...++++++. + .++.++. ...+|+..++||||+|-.+
T Consensus 94 i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~----~~~~PtLge~RGKIvll~r 164 (306)
T 3v1h_A 94 AKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG----SNANPTLKETKGKIVLFNR 164 (306)
T ss_dssp HHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC----SCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC----CCCCCchHHhcCcEEEEEe
Confidence 99865443344588888877543 1133344444432 1 1222221 2468999999999999865
|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00051 Score=61.72 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=69.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeec-cccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kT-kvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
|+|.+....--+.. .. .....||||.|.+.-... ..+.+| .+.+.++.|+|||+|.-.|. +-..|.|.|+.
T Consensus 12 lRi~l~~~~~~~~~--~~---~~~~lDPY~aV~VdE~~~-te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh 83 (138)
T 2enj_A 12 LRIGLSNFDCGSCQ--SC---QGEAVNPYCAVLVKEYVE-SENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKG 83 (138)
T ss_dssp EEEEEEEEECCCCC--CS---CCCCCCCEEEEEEEEEEE-ETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEEC
T ss_pred eEEEeeccccCCCC--Cc---ccccCCceEEEEeeeeee-ccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEc
Confidence 77777665422210 00 112479999988753110 012455 45556789999999988775 35678899985
Q ss_pred ccCCCCCCccEEEEEECCccCC------c--ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~------G--yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
.. .+|++.+++++..|.. | --||.|.- .+.|++.++++
T Consensus 84 ~a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~ 129 (138)
T 2enj_A 84 KN----VDLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYF 129 (138)
T ss_dssp SS----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEEC
T ss_pred CC----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEE
Confidence 43 3899999999999863 2 24666642 35677777663
|
| >3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0082 Score=59.66 Aligned_cols=68 Identities=16% Similarity=0.271 Sum_probs=52.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--------------------------------cc-chH
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------------------AP-VEL 180 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--------------------------------s~-i~f 180 (591)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+. -+ .+|
T Consensus 22 ~pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~~iptL 100 (252)
T 3qvq_A 22 APENTLASLHLAGQQGIKWVEIDVMLSGD-GIPVIFHDDYLSRTTDGDGLIYKTPLAELKQLDAGSWKGQEYQQETIPTL 100 (252)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECCCSBSTTTSSCCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBH
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CcEEEECCCccccccCCCceeecCcHHHHhcCCCCCccCccCCCCcCcCH
Confidence 45788999999999999999999996445 469999987763 12 458
Q ss_pred HHHHHHHhhhccccCCCceEEeeccCCCH
Q 007734 181 IKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (591)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 209 (591)
.||++.++++ .+.|-||.-...
T Consensus 101 ~evl~~~~~~-------~~~l~iEiK~~~ 122 (252)
T 3qvq_A 101 LEAIEVISQY-------GMGLNLELKPCE 122 (252)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCCT
T ss_pred HHHHHHHhcc-------CcEEEEEecCCC
Confidence 9999988763 256777776543
|
| >3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.017 Score=56.87 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=53.4
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--------------------cc-chHHHHHHHHhhhc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------AP-VELIKCLRSIKEYA 191 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--------------------s~-i~f~dvi~aI~~~A 191 (591)
..-+-|.++|..|+..||..||+||+--.| +.|||.|-.|+. .+ -+|.||++.++++.
T Consensus 18 ~~pENTl~Af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~~iptL~evl~~~~~~~ 96 (238)
T 3no3_A 18 GSAQNSIRSLERASEIGAYGSEFDVHLTAD-NVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLK 96 (238)
T ss_dssp TCCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEETTEEGGGSCHHHHTTCBCTTSCBCCBHHHHHHHHHHCT
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCCCCCChHhCCHHHHhhCCCCCCCcCCcHHHHHHHHhhcC
Confidence 345789999999999999999999996555 469999998773 23 46999999988641
Q ss_pred cccCCCceEEeeccCCC
Q 007734 192 FVASEYPVVITLEDHLT 208 (591)
Q Consensus 192 F~~S~yPvILSlE~Hcs 208 (591)
. +.|-||.-..
T Consensus 97 ----~--~~l~iEiK~~ 107 (238)
T 3no3_A 97 ----N--IRLIFELKSH 107 (238)
T ss_dssp ----T--CEEEEEECCC
T ss_pred ----C--ceEEEEeCCC
Confidence 1 5566777654
|
| >1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0071 Score=58.96 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=51.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc----------------ccc-hHHHHHHHHhhhccccCC
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------APV-ELIKCLRSIKEYAFVASE 196 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt----------------s~i-~f~dvi~aI~~~AF~~S~ 196 (591)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .+| +|+||++.+++ .
T Consensus 20 ~PENTl~Af~~A~~~G~d~iE~DV~lT~D-g~lVv~HD~~l~~g~v~~~t~~eL~~l~~~iptL~evl~~~~~------~ 92 (224)
T 1vd6_A 20 AKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEA------F 92 (224)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGT------C
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEecC-CcEEEECCCccCCCChhhCCHHHHHhcCCCCCCHHHHHHhhhc------c
Confidence 34789999999999999999999995444 469999999984 133 59999987763 2
Q ss_pred CceEEeeccCCC
Q 007734 197 YPVVITLEDHLT 208 (591)
Q Consensus 197 yPvILSlE~Hcs 208 (591)
.-+.|-||.-..
T Consensus 93 ~~~~l~iEiK~~ 104 (224)
T 1vd6_A 93 PQAVFNVELKSF 104 (224)
T ss_dssp TTCEEEEEECCC
T ss_pred CCceEEEEECCC
Confidence 235566666543
|
| >2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=57.20 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=56.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--------------------------------cc-chH
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------------------AP-VEL 180 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--------------------------------s~-i~f 180 (591)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+. .+ -+|
T Consensus 19 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~g~~~~~~~~~~~iptL 97 (247)
T 2otd_A 19 APENTLAAIDVGAKYGHKMIEFDAKLSKD-GEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLL 97 (247)
T ss_dssp SCSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBSSTTSSCCSBGGGSCHHHHTTCCSSTTTCGGGTTCCCCBH
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCccccCCCCccHhhCcHHHHhhCCCCCccCCCCCCCcCCCH
Confidence 34789999999999999999999996444 469999987762 02 368
Q ss_pred HHHHHHHhhhccccCCCceEEeeccCCCHH----HHHHHHHHHHHH
Q 007734 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPD----LQAKVAEMVTQT 222 (591)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~----qQ~~ma~~l~~~ 222 (591)
+||++.+++. .+.|-||.--... --..+++.+++.
T Consensus 98 ~evl~~~~~~-------~~~l~iEiK~~~~~~~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 98 SQVAERCREH-------GMMANIEIKPTTGTGPLTGKMVALAARQL 136 (247)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-------CCEEEEEECCCCCcchHHHHHHHHHHHHH
Confidence 9999988753 3556666654321 123455555554
|
| >3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.023 Score=56.30 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=51.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc----------------------------ccchHHHHHHH
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------------APVELIKCLRS 186 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt----------------------------s~i~f~dvi~a 186 (591)
-+-|.++|..|+..||+.||+||+=-.| +.+||.|-.|+. .--+|.||++.
T Consensus 16 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~iptL~evl~~ 94 (250)
T 3ks6_A 16 GDSTPHGFTATAAMALEEVEFDLHPTAD-GAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRYGAGSHPMTLEELCAL 94 (250)
T ss_dssp CTTCHHHHHHHHTSSSSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHHHCCBTTSTTCCCEEHHHHHHH
T ss_pred CcchHHHHHHHHHcCCCEEEEEEeEccC-CCEEEECCCccccccCCCCeeecCcHHHHhcCCCCCCCCccCcCHHHHHHH
Confidence 4788999999999999999999996444 469999987763 12348899988
Q ss_pred HhhhccccCCCceEEeeccCC
Q 007734 187 IKEYAFVASEYPVVITLEDHL 207 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc 207 (591)
+++ ..+.|-||.-.
T Consensus 95 ~~~-------~~~~l~iEiK~ 108 (250)
T 3ks6_A 95 YVD-------SHVNFRCEIKP 108 (250)
T ss_dssp HTT-------CSCEEEEEECC
T ss_pred Hhc-------cCcEEEEEeCC
Confidence 775 34778888766
|
| >2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.017 Score=57.43 Aligned_cols=66 Identities=17% Similarity=0.282 Sum_probs=51.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCC---cccc-------------------------c-chHHHHHH
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG---TMTA-------------------------P-VELIKCLR 185 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~---tlts-------------------------~-i~f~dvi~ 185 (591)
=+-|.++|..|+..||..||+||+=-.| +.|||.|-. |+.. + .+|+||++
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~ 100 (258)
T 2o55_A 22 PENTLRSFVLCMERNIPYIETDLRVCKT-GEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFV 100 (258)
T ss_dssp CTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHH
T ss_pred CccHHHHHHHHHHcCcCEEEEEEEEecC-CeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHH
Confidence 4778999999999999999999995444 469999999 8731 2 36899999
Q ss_pred HHhhhccccCCCceEEeeccC
Q 007734 186 SIKEYAFVASEYPVVITLEDH 206 (591)
Q Consensus 186 aI~~~AF~~S~yPvILSlE~H 206 (591)
.++++. .-+.|.||.-
T Consensus 101 ~~~~~~-----~~~~l~iEiK 116 (258)
T 2o55_A 101 AIEEQK-----FNLKLNLELK 116 (258)
T ss_dssp HHHHSC-----SCCEEEEEEC
T ss_pred Hhhhhc-----CceEEEEEEc
Confidence 988753 2356666654
|
| >1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.012 Score=57.81 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=50.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc----------------------ccc-hHHHHHHHHhhh
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------APV-ELIKCLRSIKEY 190 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt----------------------s~i-~f~dvi~aI~~~ 190 (591)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .+| +|+||++.+++.
T Consensus 25 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~Rtt~~~g~v~d~T~~eL~~l~~~~iptL~evL~~~~~~ 103 (234)
T 1o1z_A 25 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDLKRLFGLDVKIRDATVSELKELTDGKITTLKEVFENVSDD 103 (234)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEEHHHHCEEEEGGGSCHHHHHHHTTTCCCBHHHHHHHSCTT
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeEecC-CCEEEEcCCcHHhcCCcCcCcccCcHHHHhcCCCCCCCCHHHHHHhcccC
Confidence 34778999999999999999999997555 469999998873 133 599999988762
Q ss_pred ccccCCCceEEeeccC
Q 007734 191 AFVASEYPVVITLEDH 206 (591)
Q Consensus 191 AF~~S~yPvILSlE~H 206 (591)
+.|-||.-
T Consensus 104 --------~~l~iEiK 111 (234)
T 1o1z_A 104 --------KIINIEIK 111 (234)
T ss_dssp --------SEEEEEEC
T ss_pred --------CeEEEEeC
Confidence 44666665
|
| >3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.027 Score=56.92 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=50.6
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--------------------------------ccchH
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------------------APVEL 180 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--------------------------------s~i~f 180 (591)
..-+-|.++|..|+..||..||+||+--.| +.|||.|-.|+. .--+|
T Consensus 29 ~~pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL 107 (278)
T 3i10_A 29 SAPENSTAAIDSAIAMKVDIVEIDIQKTKD-GQLILMHDNTLDRTTTGKGEIKNWTLADIKKLKLKDKDGKVTNYVVPTL 107 (278)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHTTSCBBCTTSCBCSCCCCBH
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CeEEEecCcchhhcCCCCceeecCcHHHHhcCCCCCCCcccCCCCCCCH
Confidence 445889999999999999999999997555 469999987662 12358
Q ss_pred HHHHHHHhhhccccCCCceEEeecc
Q 007734 181 IKCLRSIKEYAFVASEYPVVITLED 205 (591)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvILSlE~ 205 (591)
+||++.++. .++|.||.
T Consensus 108 ~evl~~~~~--------~~~~nie~ 124 (278)
T 3i10_A 108 EEALLTAKG--------KIMVNLDK 124 (278)
T ss_dssp HHHHHHHTT--------TSEEEEES
T ss_pred HHHHHHhcC--------CeEEEEec
Confidence 888888764 37888885
|
| >2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.015 Score=57.65 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+
T Consensus 24 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 63 (252)
T 2pz0_A 24 VPENTIAAFKRAMELGADGIELDVQLTKD-GHLVVIHDETV 63 (252)
T ss_dssp SCTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEecC-CeEEEEcCCcc
Confidence 34788999999999999999999995444 46999998775
|
| >3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.054 Score=54.06 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 21 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 61 (272)
T 3ch0_A 21 LPENTIAAFTKALLLGVTTLEFDLVISKD-NRVVVSHDTFFH 61 (272)
T ss_dssp SSTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBCC
T ss_pred CCcccHHHHHHHHHcCCCEEEEeeeEcCC-CcEEEeCCCccc
Confidence 34788999999999999999999995444 469999998873
|
| >3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.085 Score=53.95 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=34.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
..-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 29 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~~Vv~HD~~l 69 (313)
T 3l12_A 29 VMPENTLEGFAFTLAAGVRALEFDVVMTAD-GVPVVTHNHHL 69 (313)
T ss_dssp TSCTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECSSSBC
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEECCchh
Confidence 345789999999999999999999996444 46999998775
|
| >3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.045 Score=55.67 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|.++|..|+..||..||+|||--.| +.+||.|-.|+
T Consensus 46 pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~Vv~HD~~l 84 (292)
T 3mz2_A 46 PENSMETFENTLSYTPATFEIDPRLTKD-SVIVLFHDDTL 84 (292)
T ss_dssp CTTCHHHHHHHHHHCCCEEEECEEECTT-CCEEECCSSSS
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeECCC-CcEEEECCchh
Confidence 4789999999999999999999997555 46999997665
|
| >1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=93.50 E-value=0.063 Score=53.00 Aligned_cols=41 Identities=27% Similarity=0.335 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.=+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 14 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 54 (248)
T 1zcc_A 14 APENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETLD 54 (248)
T ss_dssp SCSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBTT
T ss_pred CCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCccc
Confidence 34778999999999999999999995444 469999998874
|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A | Back alignment and structure |
|---|
Probab=93.47 E-value=0.37 Score=57.00 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=68.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeec---CCccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~Lr 537 (591)
..++|+|+++.++..+ .....+.||++.+......- ...+|+.+. ..+|.|||.++|++.. |-.|.|.
T Consensus 355 ~~f~v~i~~~~~~n~~-------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~ 426 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-------IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLC 426 (1091)
T ss_dssp SEEEEEEEEESCCCCC-------CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEE
T ss_pred CCEEEEEEEecCCCCC-------ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEE
Confidence 4589999999877432 11235679999987433222 223444333 3478899999998864 5568999
Q ss_pred EEEEeccCC----CCCCccEEEEEECC----ccCCcceEEEcc
Q 007734 538 IEVHEYDMS----EKDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~----~~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
|+||+.... .....||++.++|- .|++|-..+.|.
T Consensus 427 ~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW 469 (1091)
T 3hhm_A 427 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 469 (1091)
T ss_dssp EEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECE
T ss_pred EEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEee
Confidence 999986532 12357999999985 478897666553
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=92.75 E-value=0.086 Score=50.59 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=59.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHH---HHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCC
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLI---EVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~---~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~ 97 (591)
...++..+|..|-.+ +.|+.++|..+|. ...+. ..+.+.+.+++.+.-.. ...-+.+.+++++|..+|....
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~--~D~d~dG~I~~~EF~~~~~~~~ 196 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTVIEDIIDKTFEE--ADTKHDGKIDKEEWRSLVLRHP 196 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHH--HCSSCSSEECHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHHhCh
Confidence 355789999998643 8899999999997 34555 46888888877643211 1111346799999999998432
Q ss_pred CC--CCCCCCCcccCCCCcccceeeeccCccc
Q 007734 98 NP--PLSPTPVVHHDMTAPVSHYFIYTGHNSY 127 (591)
Q Consensus 98 n~--~~~~~~~v~qdM~~PLs~YfI~SSHNTY 127 (591)
.. .+. ....++.+.++..|...|.||||
T Consensus 197 ~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~ 226 (226)
T 2zfd_A 197 SLLKNMT--LQYLKDITTTFPSFVFHSQVEDT 226 (226)
T ss_dssp GGGGGGC--CGGGGGHHHHC------------
T ss_pred HHHHHhc--hHHhhchhhcchhHHhhhhhccC
Confidence 11 111 33567888899999999999987
|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* | Back alignment and structure |
|---|
Probab=92.52 E-value=0.36 Score=56.57 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=68.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeec---CCccEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~L 536 (591)
...++|+|.++.++... ...+.||++.+...... +....|+.+.-..+|.|||.++|++.. |-.|.|
T Consensus 216 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L 286 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL 286 (940)
T ss_dssp CSEEEEEEEEEECCCC------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred CCceEEEEEEecccCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence 35699999999887431 23467999888742211 112345444445679999999998774 545899
Q ss_pred EEEEEeccCC--C----------CCCccEEEEEECCc----cCCcceEEEcc
Q 007734 537 RIEVHEYDMS--E----------KDDFGGQTCLPVSE----LKQGIRAVPLH 572 (591)
Q Consensus 537 rf~V~D~d~~--~----------~dd~lGq~~ipL~s----L~~GyR~vpL~ 572 (591)
.|+||+.... + ....+|++.+||=. |++|...+.|.
T Consensus 287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 338 (940)
T 2wxf_A 287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMW 338 (940)
T ss_dssp EEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECE
T ss_pred EEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEe
Confidence 9999996421 1 13489999999754 67887666553
|
| >3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.70 E-value=0.66 Score=44.97 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=43.2
Q ss_pred eeeeccccCCCCCCccCcEEEEeeecCC--ccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcc
Q 007734 505 VMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERY 579 (591)
Q Consensus 505 ~k~kTkvi~nn~NPvWNEtf~F~v~~pe--la~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~ 579 (591)
..++|-+...+-+|.|+|++...+.... .+-|+|+++......+.|- ..-.-||-|+||++.+|..+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk--------~E~pfg~a~lPL~~~dG~~L 145 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDK--------SEKIFALAFVKLMRYDGTTL 145 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCC--------CCCEEEEEEEESBCTTSCBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccc--------cCCeeEEEEEEcccCCCcEE
Confidence 4568888888899999999998876443 4789999987543221110 01123566666666555543
|
| >1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A* | Back alignment and structure |
|---|
Probab=91.54 E-value=0.086 Score=52.95 Aligned_cols=36 Identities=19% Similarity=0.062 Sum_probs=33.2
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~t 173 (591)
+-|.++|..|+..||..||+||+= .| +.|||.|=.|
T Consensus 14 ENTl~Af~~A~~~Gad~IE~DV~l-kD-G~lVv~HD~~ 49 (285)
T 1xx1_A 14 VNAVAQIPDFLDLGANALEADVTF-KG-SVPTYTYHGT 49 (285)
T ss_dssp CCSTTHHHHHHHHTCSEEEEEEEE-ET-TEEEEEECCS
T ss_pred hccHHHHHHHHHhCCCEEEEEEEE-EC-CEEEEEcCCc
Confidence 788999999999999999999998 76 4699999988
|
| >1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A | Back alignment and structure |
|---|
Probab=90.93 E-value=0.19 Score=52.36 Aligned_cols=42 Identities=21% Similarity=0.219 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
.=+-|.++|..|+..||..||+||+=-.| +.|||.|-.||..
T Consensus 43 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~r 84 (356)
T 1ydy_A 43 LPEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLDR 84 (356)
T ss_dssp SSTTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCTT
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeEECCC-CcEEEeCCChHHh
Confidence 34789999999999999999999996544 4699999998743
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=90.77 E-value=0.93 Score=37.07 Aligned_cols=63 Identities=17% Similarity=0.341 Sum_probs=48.7
Q ss_pred hHHHHHHHHhhCC-C---CcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN-G---TMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~-~---~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|..+ + .|+.++|+.+|+.+ -+. ..+.+.+.++|..+-.. +.+.+++++|..++.
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~d------~dG~I~f~EF~~~~~ 79 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDSN------GDGECDFQEFMAFVA 79 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHHHHHHHHHHCTT------SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHHHHHHHHHHcCC------CCCCCcHHHHHHHHH
Confidence 5788999999833 4 99999999999973 122 35788899999886521 246799999998876
|
| >2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A | Back alignment and structure |
|---|
Probab=90.58 E-value=0.23 Score=50.06 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=33.8
Q ss_pred CCCCChHHHHHH-HhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRA-LQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~a-L~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.=+-|.++|..| +..||..||+||+=-.| +.|||.|-.||
T Consensus 36 ~PENTl~Af~~A~~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 76 (287)
T 2oog_A 36 APEHTFQAYDKSHNELKASYIEIDLQRTKD-GHLVAMHDETV 76 (287)
T ss_dssp SCSSSHHHHHHHHHTSCCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCChh
Confidence 347889999999 68999999999995444 46999999887
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=90.49 E-value=1.2 Score=36.51 Aligned_cols=66 Identities=15% Similarity=0.331 Sum_probs=52.0
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.....++..+|..|-.+ +.|+.++|...|+... . ..+.+++..++..+... +.+.+++++|..++.
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~-~~~~~e~~~l~~~~D~d------~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID------GDGQVNYEEFVQMMT 92 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHh
Confidence 44667899999999643 8899999999998764 3 36888899998887521 246799999999875
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=90.30 E-value=0.78 Score=39.77 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=51.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..|-.+ +.|+.++|..+|....+. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGH-QVGHRDIEEIIRDVDLN------GDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSS-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHh
Confidence 46788899999543 899999999999986666 47888999999987521 246799999999874
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=89.67 E-value=0.92 Score=38.38 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=49.5
Q ss_pred hHHHHHHHHhh---CC-CCcCHHHHHHHHHHHc----CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS---EN-GTMTVDHLHRFLIEVQ----KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~---~~-~~~~~~~~~~Fl~~~Q----~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|. ++ ++|+.++|+.+|+.+= ++ ..+.+.+.+||..+-. -+.+.+++++|+.+|.
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~-~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~~~ 80 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNKFMSVLDT------NKDCEVDFVEYVRSLA 80 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCC-TTCHHHHHHHHHHHHH------CCCSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 57899999997 23 6899999999998642 23 4678899999988652 1346799999999876
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.20 E-value=1.4 Score=37.34 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=48.8
Q ss_pred hHHHHHHHHhh-C-C--CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-E-N--GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~-~--~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|. . + .+|+.++|+.+|+.+=++ ...+.+.+.+||..+-. -+.+.+++++|+.+|.
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~m~ 83 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 83 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 57889999997 2 2 489999999999964332 13578889999988642 1346799999999876
|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.08 E-value=0.43 Score=56.66 Aligned_cols=103 Identities=15% Similarity=0.116 Sum_probs=64.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCC---ccEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~L 536 (591)
...++|+|.++.++... ...+.||++.+...... +....|+.+.-..+|.|||.++|++...+ .|.|
T Consensus 352 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L 422 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARL 422 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEE
T ss_pred CCCEEEEEEEeccCCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEE
Confidence 34699999999887431 23467888877632111 11234554444568999999999887544 4899
Q ss_pred EEEEEeccCC----------------------CCCCccEEEEEECCc----cCCcceEEEcc
Q 007734 537 RIEVHEYDMS----------------------EKDDFGGQTCLPVSE----LKQGIRAVPLH 572 (591)
Q Consensus 537 rf~V~D~d~~----------------------~~dd~lGq~~ipL~s----L~~GyR~vpL~ 572 (591)
.|+||+.... .....+|++.+||=. |++|...+.|.
T Consensus 423 ~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 484 (1092)
T 2y3a_A 423 CFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSW 484 (1092)
T ss_dssp EEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCC
T ss_pred EEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEe
Confidence 9999985311 012378888888754 67787666554
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=89.05 E-value=0.57 Score=42.84 Aligned_cols=69 Identities=12% Similarity=0.260 Sum_probs=50.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhch-hh-hccCCCCHHHHHHHhccC
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHL-NI-FQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~-~~-~~~~~l~~~~F~~~l~s~ 96 (591)
..++..+|..|-.+ +.|+.++|+.+|. + ..++.+++..++..+...... .. ...+.+++++|..+|.+.
T Consensus 107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~---~-~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 107 STFLKAAFNKIDKDEDGYISKSDIVSLVH---D-KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp -CHHHHHHHHHCTTCSSCBCHHHHHHHTT---T-SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHc---C-CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHhc
Confidence 46899999999643 8999999999998 3 357899999999988632110 00 012679999999999753
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=88.65 E-value=0.92 Score=35.14 Aligned_cols=63 Identities=14% Similarity=0.360 Sum_probs=49.6
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
+.++..+|..|-.+ +.++.++|...|+... ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~------~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTD------GDGFIDFNEFISFCNA 66 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH---TCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC---CCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHH
Confidence 35789999999643 8899999999999765 46888899998877521 2467999999998863
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=88.33 E-value=1.6 Score=36.02 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=48.0
Q ss_pred hHHHHHHHHhh-C-C--CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-E-N--GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~-~--~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|. . + ++|+.++|+.+|+.+=++ ...+.+.+.++|..+-. -+.+.+++++|..+|.
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~~~ 80 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 80 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCT------TSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHH
Confidence 57889999997 2 2 499999999999863321 12477889999988642 1346799999999875
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=87.66 E-value=1 Score=33.47 Aligned_cols=61 Identities=16% Similarity=0.361 Sum_probs=47.7
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
++..+|..+-.+ +.++.++|...|.... . ..+.+.+..++..+... +.+.+++++|..++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~D~~------~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFS-P-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTC-T-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHH
Confidence 578899998543 8899999999998753 2 46788888898887521 235799999999885
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.64 E-value=0.96 Score=37.90 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=48.6
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..||...|..|=. + +.|+.++|+..|+.- +. ..+.+++.+|+..+-.. +.+.+++++|+..|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~ei~~l~~~~D~d------~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GY-MPNEVELEVIIQRLDMD------GDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TC-CCCTTTHHHHHHHHCSS------CSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHHCCC------CCCeEeHHHHHHHhC
Confidence 3568888999843 3 899999999999875 33 46778889999887521 246799999999874
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.77 E-value=0.56 Score=43.56 Aligned_cols=70 Identities=14% Similarity=0.165 Sum_probs=51.7
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
...++..+|..|-.+ +.|+.++|+.+|....+. ..+.+++..++...-.. ...-+.+.+++++|..+|.+
T Consensus 112 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~--~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV-QVTEEQLENIADRTVQE--ADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCS-CCCHHHHHHHHHHHHHH--HCSSCSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHH--cCCCCCCcCcHHHHHHHHHH
Confidence 356788999999643 889999999999976455 47888899988872210 01112467999999999984
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=86.76 E-value=2.9 Score=33.34 Aligned_cols=63 Identities=14% Similarity=0.273 Sum_probs=48.8
Q ss_pred chHHHHHHHHhh--CC-C-CcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYS--EN-G-TMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~--~~-~-~~~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..|- .+ + .|+.++|...|+. ... ..+.+.+..++..+... +.+.+++++|..++.
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~--~~~~~~~~~~~~~~D~d------~dg~i~~~eF~~~~~ 79 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV--QKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC--CCCHHHHHHHHHHHHHC------TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 357888999995 33 6 8999999999986 432 36788899998887521 246799999998876
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=86.74 E-value=1.3 Score=36.57 Aligned_cols=66 Identities=14% Similarity=0.240 Sum_probs=51.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR-ALTDAETKAFLKAGDSD------GDGAIGVDEWAALVK 108 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCC-CCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHT
T ss_pred hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHh
Confidence 3567889999999643 8899999999999763 33 46888899998887521 235799999999875
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.46 E-value=0.7 Score=40.55 Aligned_cols=63 Identities=13% Similarity=0.339 Sum_probs=47.7
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~-~~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..|..+|+.|..+ ++|+.++|+..|+.+ =+. ..+.+.+.+||...-. -+.+.+++++|..+|.
T Consensus 15 e~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~~i~~~D~------d~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 15 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHHHHHHHCT------TCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHHHHHHHcC------CCCCcCcHHHHHHHHH
Confidence 4577889999876 999999999998752 022 3467788889887642 1347899999999886
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=85.28 E-value=1.8 Score=35.73 Aligned_cols=66 Identities=14% Similarity=0.252 Sum_probs=52.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|...|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDSD------HDGKIGADEFAKMVA 107 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 4567899999999643 8999999999999763 33 46888999998887521 246799999999885
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=85.23 E-value=2.3 Score=36.88 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=52.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
....++..+|..|-.+ +.|+.++|..+|....+. ..+.+.+..++..+... ...-+.+.+++++|..+|.+
T Consensus 72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~--~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVDKTIIN--ADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHH--HCTTSSSSBCHHHHHHHHGG
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHhc
Confidence 3446788999998643 889999999999985555 46888888888873211 01113467999999999974
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=85.19 E-value=1.8 Score=34.51 Aligned_cols=63 Identities=21% Similarity=0.412 Sum_probs=48.6
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..|-.+ +.|+.++|..+|+... . ..+.+.+..++..+... +.+.+++++|..++.
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~l~~~~D~~------~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLG-Q-NPTKEELDAIIEEVDED------GSGTIDFEEFLVMMV 83 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCTT------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 34677889888643 8899999999998753 3 46888899998887521 246799999999876
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=85.09 E-value=1.4 Score=36.41 Aligned_cols=66 Identities=17% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR-ALTDAETKAFLADGDKD------GDGMIGVDEFAAMIK 107 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHh
Confidence 3467889999998643 8899999999998652 33 46888888888887521 246799999998874
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=85.06 E-value=2.2 Score=37.81 Aligned_cols=64 Identities=19% Similarity=0.396 Sum_probs=48.1
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-.+ +.|+.++|..+|... +. ..+.+.+..++..+... +.+.+++++|..+|..
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKEL-GE-NLTEEELQEMIAEADRN------DDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCCS------SSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHHh
Confidence 45677788888533 889999999999864 33 47888888888887521 2467999999999973
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=85.00 E-value=2.2 Score=37.11 Aligned_cols=64 Identities=14% Similarity=0.335 Sum_probs=48.4
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-. + +.|+.++|+.+|... ++ ..+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~d------~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNL-GE-KLTDDEVDEMIREADID------GDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHcc
Confidence 3567788888853 3 889999999999864 33 47888899998887521 2467999999998864
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=84.22 E-value=2.3 Score=36.69 Aligned_cols=65 Identities=15% Similarity=0.327 Sum_probs=47.8
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+|..+|..|- .+ . +|+.++|+..|+.+-++ ...+.+.+.+||..+-. -+.+.+++++|+.+|.
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~------dgdG~Idf~EF~~~m~ 92 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLS 92 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCS------SSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 357888999997 33 3 89999999999864321 12466788888887642 1246799999998876
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=84.08 E-value=2.9 Score=34.95 Aligned_cols=64 Identities=9% Similarity=0.207 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhC----C-CCcCHHHHHHHHHHHcCCCC---CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE----N-GTMTVDHLHRFLIEVQKEDK---ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~----~-~~~~~~~~~~Fl~~~Q~~~~---~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|.. + ++|+.++|+..|+..=++.. .+.+.+.++|..+-. -+.+.+++++|..+|.
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~m~ 82 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA------NHDGRISFDEYWTLIG 82 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCC------CSSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 578999999964 2 79999999999987533311 125677888776541 1346899999999886
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=83.94 E-value=2.8 Score=38.52 Aligned_cols=71 Identities=10% Similarity=0.129 Sum_probs=53.8
Q ss_pred cCccCCCCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 16 FHVAASEAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 16 ~~~~~~~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
+++....++.+|..+|..+- .+ +.|+.++|..+|. ..+ ...+.+.+..++..+... +.+.+++++|..++
T Consensus 18 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~~-~~~~~~~~~~l~~~~D~d------~dG~I~~~EF~~~~ 89 (191)
T 1y1x_A 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALS-SAG-VPFSLATTEKLLHMYDKN------HSGEITFDEFKDLH 89 (191)
T ss_dssp TTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHC-BTT-BCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcC-CCCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHH
Confidence 45566677889999999994 34 8999999999993 222 246788888888877521 24679999999887
Q ss_pred c
Q 007734 94 F 94 (591)
Q Consensus 94 ~ 94 (591)
.
T Consensus 90 ~ 90 (191)
T 1y1x_A 90 H 90 (191)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=83.83 E-value=3.5 Score=35.03 Aligned_cols=64 Identities=16% Similarity=0.274 Sum_probs=47.8
Q ss_pred hHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCC---C-CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKED---K-ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~-~--~-~~~~~~~~~Fl~~~Q~~~---~-~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|.. + . .|+.++|+..|+..=+.. . .+.+.+..+|..+-.. +.+.+++++|+.+|.
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d------~dG~I~f~EF~~~~~ 83 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTN------ADKQLSFEEFIMLMA 83 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHH
Confidence 578889999973 4 6 899999999998433331 1 4778888888876421 246799999998876
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=83.70 E-value=1.3 Score=38.33 Aligned_cols=63 Identities=13% Similarity=0.373 Sum_probs=50.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+.+..++..+ . +.+.+++++|..+|.
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~-d-------~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-GD-ALTDQEAIDALNAF-S-------SEDNIDYKLFCEDIL 145 (146)
T ss_dssp CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHH-C-------SSSEEEHHHHHHHHT
T ss_pred chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHc-C-------CCCcCcHHHHHHHHh
Confidence 3567899999999643 789999999999864 44 47899999999987 2 136799999999885
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=83.51 E-value=2 Score=36.80 Aligned_cols=63 Identities=19% Similarity=0.403 Sum_probs=50.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-.+ +.|+.++|+.+|.... . ..+.+.+..++..+.. +.+.+++++|..+|.+
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~-------~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLG-E-KLSNEEMDELLKGVPV-------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHH-S-CSCHHHHHHHHHHTTC-------SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC-C-CCCHHHHHHHHHhccC-------CCCcEeHHHHHHHHhc
Confidence 47899999999643 8899999999998763 3 3688889999887642 3578999999999863
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.17 E-value=1.4 Score=37.61 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=46.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
+.++..+|..|-.+ +.|+.++|+.+|+ +. ..+.+++..|+..+.. -+.+.+++++|..+|.
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~-~~~~~~~~~i~~~~D~------d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM---QS-SLPQAQLASIWNLSDI------DQDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TT-CCCHHHHHHHHHHHCS------SCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hC-CCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHH
Confidence 45778889998643 8899999999998 33 4688888888887541 1245799999998875
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=83.00 E-value=0.95 Score=37.43 Aligned_cols=67 Identities=16% Similarity=0.328 Sum_probs=50.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+.+..++..+... +.+.+++++|..+|.|
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~s 108 (108)
T 1rro_A 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR-ELTESETKSLMDAADND------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCCS------SSSSEEHHHHHHHHTC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHcC
Confidence 3567888999998643 7899999999998653 33 46888888888877521 2467999999998753
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=82.95 E-value=2 Score=35.51 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=50.6
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.++.++|...|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~~~D~~------~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR-VLTSAETKAFLAAGDTD------GDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc-cCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHh
Confidence 4567889999999643 8999999999998652 33 46888899998887521 246799999999874
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=82.57 E-value=2.2 Score=37.88 Aligned_cols=65 Identities=9% Similarity=0.171 Sum_probs=51.1
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
...++..+|..|-.+ +.|+.++|..+|... +. ..+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d------~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GG-RFTPEEIKNMWAAFPPD------VAGNVDYKNICYVITH 159 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-CC-CCCHHHHHHHHHhcCCC------CCCeEeHHHHHHHHHh
Confidence 457888999999643 889999999999864 44 47888999998876421 2467999999999984
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=82.49 E-value=1.9 Score=34.00 Aligned_cols=63 Identities=10% Similarity=0.256 Sum_probs=49.0
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-.+ +.++.++|...|+... ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD------GDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC---CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHH
Confidence 35678889988543 8899999999998653 46888899998887521 2357999999999874
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=82.31 E-value=2.9 Score=36.55 Aligned_cols=64 Identities=17% Similarity=0.419 Sum_probs=48.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..+-.+ +.|+.++|..+|... +. ..+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhh
Confidence 45678888888533 889999999999754 33 46888888888887521 2467999999999863
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=82.29 E-value=2.7 Score=34.51 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=51.4
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|..+|...- +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAGDKD------GDGKIGVEEFSTLVA 107 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCC-CCCHHHHHHHHHHHCCC------CCCcCCHHHHHHHHH
Confidence 4567899999999643 8899999999999762 33 46888899998887521 246799999999875
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.14 E-value=2 Score=34.62 Aligned_cols=61 Identities=16% Similarity=0.354 Sum_probs=46.8
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..|-.+ +.|+.++|...|+... .+.+.+..++..+... +.+.+++++|..++.
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~~~~~~D~d------~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR----VRPADAEAVFQRLDAD------RDGAITFQEFARGFL 88 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----CCHHHHHHHHHHHCTT------CSSEECHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----cCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHH
Confidence 45678889998643 8899999999998642 5778888888877521 235799999998764
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=82.13 E-value=1.8 Score=33.22 Aligned_cols=64 Identities=13% Similarity=0.276 Sum_probs=48.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-.+ +.|+.++|...|+... . ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~~------~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALG-F-DVKKPEILELMNEYDRE------GNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHT-C-CCHHHHHHHHHHHHCCS------SSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHHH
Confidence 35678889998643 8899999999999863 3 35778888888877521 2356999999998863
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=82.10 E-value=2.7 Score=33.45 Aligned_cols=64 Identities=20% Similarity=0.412 Sum_probs=49.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..+|..+|..|-.+ +.|+.++|...|+.. +. ..+.+++..++..+... +.+.+++++|..++..
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~l~~~~d~~------~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINL-GE-KLTDEEVEQMIKEADLD------GDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS------CCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHh
Confidence 45788899998643 889999999999875 33 46888899998877521 2467999999999874
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=82.09 E-value=2.5 Score=35.19 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=49.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+.++..+|..+-.+ +.++.++|+.+|+.. ..+.+.+.+|++.... -+.+.+++++|...|.
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----~l~~~~l~~i~~~~D~------d~dG~i~~~EF~~~~~ 72 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS----GLPDLILGKIWDLADT------DGKGVLSKQEFFVALR 72 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS----SSCHHHHHHHHHHHCC------SSSSSCCSHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc----CCCHHHHHHHHHHHCC------CCCCcCCHHHHHHHHH
Confidence 3467899999999643 889999999999753 3678888888887541 1246799999998876
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=82.06 E-value=1.9 Score=35.64 Aligned_cols=65 Identities=12% Similarity=0.315 Sum_probs=47.4
Q ss_pred chHHHHHHHHhh-CCCCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYS-ENGTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~-~~~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+|..+|..|- .++.|+.++|...|+..-+. ...+.+.+..+|..+.. -+.+.+++++|...|.
T Consensus 8 ~~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~------d~dG~I~f~EF~~~~~ 76 (96)
T 1a4p_A 8 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 76 (96)
T ss_dssp HHHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCT------TSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 357888999997 34799999999999863221 12456778888887642 1246799999998876
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=81.71 E-value=3.7 Score=35.99 Aligned_cols=66 Identities=17% Similarity=0.289 Sum_probs=51.3
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
....+|..+|..|=. + ++|+.++|+..|... ++ ..+.+++..|+..+-.. +.+.++++.|++.|..
T Consensus 80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-g~-~~~~~e~~~l~~~~D~d------~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINL-GE-KVTDEEIDEMIREADFD------GDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCCS------CCSSEEHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-Cc-cccHHHHHHHHHHhCCC------CCCeEeHHHHHHHHhc
Confidence 345679999999954 3 899999999999864 44 47889999999887521 2467999999998863
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=81.60 E-value=2.2 Score=37.36 Aligned_cols=66 Identities=9% Similarity=0.282 Sum_probs=52.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccC
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 96 (591)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+.+..|+..+.. - .+.+++++|..+|.+.
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GD-NFNKDEMRMTFKEAPV------E-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHCCE------E-TTEECHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCC------C-CCEEeHHHHHHHHhcC
Confidence 3567899999999643 889999999999864 44 4788899999887642 1 3679999999999853
|
| >3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A* | Back alignment and structure |
|---|
Probab=81.27 E-value=2.1 Score=43.44 Aligned_cols=54 Identities=15% Similarity=0.068 Sum_probs=41.3
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc-------ccchHHHHHHHHhhh
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT-------APVELIKCLRSIKEY 190 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt-------s~i~f~dvi~aI~~~ 190 (591)
.-+++++..|+..|+.-||+|+.=-.++ .|+++|-++.+ ....|.+-++.|++.
T Consensus 36 vNTl~~~~~a~~~GAn~IE~DV~~~~dg-~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ 96 (302)
T 3rlg_A 36 VNAIGQIDEFVNLGANSIETDVSFDDNA-NPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSA 96 (302)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECBCTTS-CBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEEEEEECCCC-CEEEEECCCCcchhccCCCCccHHHHHHHHHHh
Confidence 5579999999999999999999753443 56665544443 357889999999884
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=81.02 E-value=1.8 Score=32.99 Aligned_cols=64 Identities=11% Similarity=0.320 Sum_probs=48.3
Q ss_pred CchHHHHHHHHh-h--CC-CCcCHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 23 APDAVKSMFDQY-S--EN-GTMTVDHLHRFLIEVQKEDKA--SKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 23 ~r~ei~~if~~~-~--~~-~~~~~~~~~~Fl~~~Q~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
+..++..+|..| - ++ +.|+.++|...|+.... .. +.+.+..++..+... +.+.+++++|..++.
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~l~~~~D~~------~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP--SLLKGMSTLDEMIEEVDKN------GDGEVSFEEFLVMMK 72 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG--GSCTTSCSHHHHHHHHCTT------CSSEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC--CcCCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 467899999999 3 34 67999999999998642 24 566788888876421 235699999998875
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=80.81 E-value=2.6 Score=34.72 Aligned_cols=66 Identities=12% Similarity=0.252 Sum_probs=51.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....++..+|..|-.+ +.|+.++|..+|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADKD------GDGKIGIDEFETLVH 108 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHH
Confidence 4567899999999633 8999999999998652 33 46888899999887521 246799999999875
|
| >1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11 | Back alignment and structure |
|---|
Probab=80.79 E-value=7.1 Score=34.38 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=51.8
Q ss_pred chHHHHHHHHhhCC-----CCcCHHHHHHHHHHHcCC--CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN-----GTMTVDHLHRFLIEVQKE--DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~-----~~~~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-.+|+.+|..|+.. ..|+..+|.+++++.+=. ..+|..++.-|+.++. . ..+.|++++|..+|-
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv~-k------~~r~I~f~qF~~aL~ 91 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVT-G------PKKKATFDETKKVLA 91 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHT-C------SSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehccc-C------CcceecHHHHHHHHH
Confidence 35899999999841 679999999999998855 3578899999999983 2 125699999999886
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=80.77 E-value=2.1 Score=38.80 Aligned_cols=64 Identities=14% Similarity=0.294 Sum_probs=49.7
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..+.++..+|..+-. + +.|+.++|..+|. +. ..+.+.+..++..+... +.+.+++++|..+|..
T Consensus 120 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---~~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 120 LSRERLLAAFQQFDSDGSGKITNEELGRLFG---VT-EVDDETWHQVLQECDKN------NDGEVDFEEFVEMMQK 185 (191)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHTT---SS-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---cC-CCCHHHHHHHHHHhCCC------CCCCCCHHHHHHHHHH
Confidence 345688899999853 3 8899999999997 44 46888899998887521 2467999999999863
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=80.75 E-value=3.3 Score=33.97 Aligned_cols=66 Identities=9% Similarity=0.178 Sum_probs=49.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccC
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 96 (591)
...+|..+|..|-.+ +.|+.++|...|+... . ..+.+++..++..+.. -+.+.+++++|..+|...
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~e~~~l~~~~d~------~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRV-Q-ILTDEQFDRLWNEMPV------NAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHTTSCB------CTTSCBCHHHHHHHHC--
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCC------CCCCCCcHHHHHHHHhcc
Confidence 346788999998543 8999999999998763 3 3688888888776531 124679999999999843
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=80.70 E-value=3.1 Score=36.44 Aligned_cols=62 Identities=11% Similarity=0.073 Sum_probs=48.5
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCC
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~ 97 (591)
++..+|..+-.+ +.|+.++|..+|.... .+.+.+..++..+... +.+.+++++|..+|..-.
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~----~~~~~~~~~~~~~D~d------~dg~i~~~ef~~~~~~~~ 162 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFG----VPEDLARQAAAALDTD------GDGKVGETEIVPAFARYF 162 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTT----CCHHHHHHHHHHHCTT------CSSBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----CCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHHHh
Confidence 488899888643 8999999999998653 6888899999887521 246799999999986433
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=80.58 E-value=1.4 Score=34.22 Aligned_cols=68 Identities=10% Similarity=0.307 Sum_probs=50.5
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccC
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 96 (591)
-.+..++. +|..|-.+ +.|+.++|...|..... ...+.+.+..++..+... +.+.+++++|..++...
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~-~~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGE-EPLTDAEVEEAMKEADED------GNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTT-CCCCHHHHHHHHHHHCSS------GGGSEEHHHHHHHHHCC
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCC-CCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHhh
Confidence 34567899 99999644 88999999999986421 246888899998887521 23679999999998743
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=80.57 E-value=3.7 Score=34.06 Aligned_cols=64 Identities=16% Similarity=0.304 Sum_probs=47.7
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|..+|..|. .+ . .|+.++|+.+|+..-+. ...+.+.+..+|..+-. -+.+.+++++|...|.
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~------d~dG~I~f~EF~~~~~ 80 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDS------NKDNEVDFNEFVVLVA 80 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCC------CCCCcCcHHHHHHHHH
Confidence 57888999996 33 3 89999999999864321 13578889999887642 1246799999998876
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=80.53 E-value=1.4 Score=32.69 Aligned_cols=59 Identities=15% Similarity=0.292 Sum_probs=43.7
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 28 ~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+|..+-.+ +.++.++|..+|+... . ..+.+.+..++..+... +.+.+++++|..++.
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~D~~------~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKR-A-IKNEQLLQLIFKSIDAD------GNGEIDQNEFAKFYG 63 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHCTT------CSSSCCHHHHHHHHT
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcc-C-CCcHHHHHHHHHHHCCC------CCCCCCHHHHHHHHH
Confidence 4678887533 8999999999998753 2 24566778888876521 246799999999885
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=80.49 E-value=2.7 Score=44.85 Aligned_cols=68 Identities=15% Similarity=0.364 Sum_probs=50.4
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccC
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 96 (591)
.....+|..+|..|=.+ ..|+.++|+.+|... ++ .++.+++.+||..+... +.+.+++++|.++|.++
T Consensus 371 ~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-Ge-~LSdeEIdeLfke~D~D------gDGkIsyeEFvkmMtSK 440 (440)
T 3u0k_A 371 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID------GDGQVNYEEFVQMMTAK 440 (440)
T ss_dssp ---CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHC--
T ss_pred CChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHhCCC
Confidence 34567899999998533 889999999999864 44 47889999999887521 24679999999999764
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=80.35 E-value=2.8 Score=35.93 Aligned_cols=62 Identities=15% Similarity=0.325 Sum_probs=45.9
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..|-. + +.|+.++|..+|... +. ..+.+.+..++..+. . +.+.+++++|..+|.
T Consensus 83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d-~------~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-GE-KLTDAEVDEMLREVS-D------GSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHS-S------SCSSEEHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-CC-CCCHHHHHHHHHHhc-C------CCCcCcHHHHHHHHh
Confidence 3567778888843 3 789999999999853 33 468888888888774 2 246799999998874
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=80.24 E-value=0.97 Score=34.79 Aligned_cols=66 Identities=14% Similarity=0.272 Sum_probs=47.0
Q ss_pred CchHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 23 APDAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 23 ~r~ei~~if~~~~~-~--~-~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
...++..+|..|-. + + .|+.++|..+|+..-+....+.+.+..++..+.. -+.+.+++++|..++.
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~ 74 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDK------NGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCC------CSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 35689999999975 4 6 8999999999986444321145566777776541 1246799999998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 591 | ||||
| d2zkmx4 | 349 | c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human | 1e-121 | |
| d1qasa3 | 327 | c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P | 1e-118 | |
| d1qasa2 | 131 | b.7.1.1 (A:626-756) PI-specific phospholipase C is | 3e-27 | |
| d2zkmx2 | 122 | b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human | 3e-24 | |
| d1qasa1 | 94 | a.39.1.7 (A:205-298) Phosphoinositide-specific pho | 3e-17 | |
| d1w15a_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi | 2e-15 | |
| d1a25a_ | 132 | b.7.1.2 (A:) C2 domain from protein kinase c (beta | 4e-14 | |
| d1uowa_ | 157 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 2e-12 | |
| d2cm5a1 | 137 | b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( | 1e-11 | |
| d2plca_ | 274 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 1e-11 | |
| d2ptda_ | 296 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 2e-10 | |
| d2bwqa1 | 125 | b.7.1.2 (A:729-853) Regulating synaptic membrane e | 8e-10 | |
| d1dqva2 | 145 | b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus | 4e-09 | |
| d1wfja_ | 136 | b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr | 3e-08 | |
| d1rsya_ | 143 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 4e-08 | |
| d1dqva1 | 130 | b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus | 5e-08 | |
| d1ugka_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens | 2e-07 | |
| d1rh8a_ | 142 | b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax | 1e-06 | |
| d2ep6a1 | 126 | b.7.1.1 (A:92-217) Multiple C2 and transmembrane d | 2e-06 | |
| d1gmia_ | 136 | b.7.1.1 (A:) Domain from protein kinase C epsilon | 4e-06 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 6e-05 | |
| d1wfma_ | 138 | b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapie | 0.001 |
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 359 bits (921), Expect = e-121
Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
HDMT P++HYFI + HN+YLT Q + S + L G R +ELD W D +
Sbjct: 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPI 60
Query: 169 L-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEI 226
+ HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++
Sbjct: 61 ITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDM 120
Query: 227 LFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEE 281
L T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 121 LLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPA 180
Query: 282 AWGKEVPNLKSLNNSACDKDDFDGGVDNDEED---SDDKSQHNEAPEYRKLIA-IHAGKP 337
W E ++++ G +D +E SD+ + E Y ++ + ++ +P
Sbjct: 181 VWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 240
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 241 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 300
Query: 397 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 444
P + W+ G QMVA N Q + +F NG GY+ K F+ +
Sbjct: 301 MPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348
|
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 352 bits (905), Expect = e-118
Identities = 111/347 (31%), Positives = 154/347 (44%), Gaps = 26/347 (7%)
Query: 114 PVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173
P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ + + HG T
Sbjct: 3 PLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYT 61
Query: 174 MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT-PGS 232
T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL P
Sbjct: 62 FTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLD 121
Query: 233 ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 292
PSPE LK +I++ K L A E E + A E
Sbjct: 122 GVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEME---------- 171
Query: 293 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKV 352
D V + + + + PE +I GG
Sbjct: 172 -----------DEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFY 220
Query: 353 RRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFN 412
S SE + + GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N
Sbjct: 221 EMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALN 280
Query: 413 MQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLP 459
Q G + + G F+ NGGCGYV KP FL N F+ +
Sbjct: 281 FQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRALTQ 324
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (261), Expect = 3e-27
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI-PSW 520
+ L+V + G+ P + + S D V I GV DT ++T + +N P W
Sbjct: 4 ERLRVRIISGQ----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRW 59
Query: 521 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 580
+ EFEF ++VP+LAL+R V +YD S K+DF GQ+ +P + LKQG R V L + G+++
Sbjct: 60 DMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHP 119
Query: 581 SVKLLMHFEF 590
S L +
Sbjct: 120 SATLFVKISI 129
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.8 bits (238), Expect = 3e-24
Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL---EDNWIPS 519
TL +TV G F + Y V + G+P D + L ++ P
Sbjct: 2 TLSITVISG----------QFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPV 51
Query: 520 WNEE--FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 577
W EE + +PELA LR+ V E + F G +P++ L G + LH
Sbjct: 52 WKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNM 107
Query: 578 RYKSVKLLMHFE 589
L + E
Sbjct: 108 PLTMPALFIFLE 119
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.9 bits (184), Expect = 3e-17
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 10 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 67
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDM 111
+ F YL S V+ DM
Sbjct: 68 KDGFLMYLLSADGNAFSLAHRRVYQDM 94
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 70.9 bits (173), Expect = 2e-15
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 8/112 (7%)
Query: 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
TL V V D D Y +V + KKT +
Sbjct: 11 QSTTNTLTVVVLKARHL------PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPN 64
Query: 518 PSWNEEFEFPLSVPELAL--LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 567
+NE F F + L + V + + +++ G+ L + G
Sbjct: 65 AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGG 116
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.0 bits (163), Expect = 4e-14
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHE 542
D D Y ++ + P +KTKT++ + P WNE F F L + L +E+ +
Sbjct: 31 DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 90
Query: 543 YDMSEKDDFGGQTCLPVSELKQGIRAV--PLHDRKGERYKSV 582
+D++ ++DF G +SEL++ L ++ Y +V
Sbjct: 91 WDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNV 132
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.9 bits (152), Expect = 2e-12
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
+P L V + + D D Y ++ + KKT ++
Sbjct: 21 VPTAGKLTVVILEAKNL------KKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLN 74
Query: 518 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 567
P +NE F F + ++ + + V +YD K+D G+ + + +R
Sbjct: 75 PYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.6 bits (146), Expect = 1e-11
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 518
+ L V + DA D + ++ + KT+ + P
Sbjct: 12 TQQGGLIVGIIRCVHL------AAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 65
Query: 519 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRK 575
+NEEF + + +LA L I V +YD+ + +D+ G L +S + ++ K
Sbjct: 66 EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNK 125
Query: 576 GER 578
++
Sbjct: 126 DKK 128
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Score = 63.3 bits (153), Expect = 1e-11
Identities = 20/152 (13%), Positives = 59/152 (38%), Gaps = 15/152 (9%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-------CSDVPIIRALQKGVRVIELDIWPN 160
T ++ I H++ + + + + L+ G+R I++
Sbjct: 9 ALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK-- 66
Query: 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL-EDHLTPDLQAKVAEMV 219
DN+++ HG L L +I ++ + +++ L ++ + D + +
Sbjct: 67 ---DNLNIYHGPIFL-NASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPL 122
Query: 220 TQTLGEILFT-PGSECLKEFPSPESLKRRIII 250
+ +T P ++ + P+ + ++ +I++
Sbjct: 123 INIYKDYFYTTPRTDTSNKIPTLKDVRGKILL 154
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 10/149 (6%)
Query: 108 HHDMTAPVSHYFIYTGHNSY-----LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162
+ P++ I H+S Q+ + + G R+ ++
Sbjct: 16 PIPDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLT-- 73
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQT 222
DN VLH G + V L + + K++ ++++L+ + + T
Sbjct: 74 DDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDM--KGAEDSFSST 131
Query: 223 LGEILF-TPGSECLKEFPSPESLKRRIII 250
+ F P + + +I++
Sbjct: 132 FEKKYFVDPIFLKTEGNIKLGDARGKIVL 160
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 8e-10
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 518
L VT+ + + P + Y ++ +D ++TKT++ P
Sbjct: 11 KVGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 64
Query: 519 SWNEEFEFPLSVP---ELALLRIEVHEYDM--SEKDDFGGQTCLPVSEL 562
WN+ F + +L I + + E+ +F G+ + +
Sbjct: 65 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETA 113
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.3 bits (127), Expect = 4e-09
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
LP L VT+ D D Y + + +KT ++
Sbjct: 16 LPTAGLLTVTIIKASNLK------AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 69
Query: 518 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 562
P++NE F ++ + L I V +YD ++ G +
Sbjct: 70 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 116
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 50.9 bits (121), Expect = 3e-08
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 522
TL+V + +G D + D Y ++ K P WNE
Sbjct: 11 TLEVVLVSAKGL------EDADFLNNMDPYVQLTCR----TQDQKSNVAEGMGTTPEWNE 60
Query: 523 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ--GIRAVPLHDRKGERYK 580
F F +S L+ ++ + D+ +DD G+ +P+ + I + K E YK
Sbjct: 61 TFIFTVSEGTTE-LKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 581 -SVKLLMHF 588
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 4e-08
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 518
L V + D D Y +V + +P +TK P
Sbjct: 31 FQNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFL--LPDKKKKFETKVHRKTLNP 82
Query: 519 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
+NE+F F + EL L + V+++D K D G+ +P++ + G
Sbjct: 83 VFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.0 bits (118), Expect = 5e-08
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 458 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 517
L L V + + D Y I +P +TK
Sbjct: 14 LYGSDQLVVRILQALDLPAKDSNGFSDPYVK--------IYLLPDRKKKFQTKVHRKTLN 65
Query: 518 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLP-VSELKQGIRAVPL 571
P +NE F+F + + ELA L V+++D + D GQ L + EL + PL
Sbjct: 66 PIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPL 122
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-07
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%)
Query: 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 518
+K V + P + + D Y ++ I +P KT+ L P
Sbjct: 19 FERKAFVVNIKEAR----GLPAMDEQSMTS-DPYIKMTI--LPEKKHKVKTRVLRKTLDP 71
Query: 519 SWNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
+++E F F P + + L + +D +DD G+ +P+S ++
Sbjct: 72 AFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 9/121 (7%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAY---SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPS 519
L + + + + D + +V + + ++TK ++ + P
Sbjct: 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPE 78
Query: 520 WNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV---PLHD 573
WN+ + + L + V +YD +DF G+ + +S PL +
Sbjct: 79 WNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138
Query: 574 R 574
+
Sbjct: 139 Q 139
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 2e-06
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 13/130 (10%)
Query: 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 522
L+V V D D + + +T T+ N P WN+
Sbjct: 7 ILQVKVLKAAD------LLAADFSGKSDPFCLL-----ELGNDRLQTHTVYKNLNPEWNK 55
Query: 523 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKS 581
F FP+ +L + V + D + DF G+ +P+ ++ G L ++ E+
Sbjct: 56 VFTFPI-KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFK 114
Query: 582 VKLLMHFEFI 591
+ + + I
Sbjct: 115 GVIYLEMDLI 124
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Score = 44.5 bits (104), Expect = 4e-06
Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 463 TLKVTVYMGEGW-YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN 521
LK+ + + P F IA D+ + +T T + P+W+
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWH 66
Query: 522 EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 565
+EF V + + V DDF + EL Q
Sbjct: 67 DEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (97), Expect = 6e-05
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHL 76
+ +F Y MT +HL +F+ + Q++ A + Q +ID + +
Sbjct: 80 IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID---KYEPS 136
Query: 77 NIFQRRG-LNLEAFFKYLFGDINPPLSPTPVVHH 109
I +RG L+ E +L G N L+ ++ H
Sbjct: 137 GINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLH 170
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.001
Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 19/129 (14%)
Query: 444 QTGPHNEVFDPKVKL-----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 498
+G N+ PK+ K L VT + D Y G
Sbjct: 5 SSGSWNQA--PKLHYCLDYDCQKAELFVTRLEAVT---------SNHDGGCDCYV-QGSV 52
Query: 499 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE--KDDFGGQTC 556
+V +T + +W E PL+ EL + + + G+
Sbjct: 53 ANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELR 112
Query: 557 LPVSELKQG 565
L +
Sbjct: 113 LGLDGTSVP 121
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| d1qasa3 | 327 | Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n | 100.0 | |
| d2zkmx4 | 349 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 100.0 | |
| d2zkmx2 | 122 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.94 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 99.93 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 99.74 | |
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 99.7 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 99.63 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 99.61 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 99.56 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 99.52 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.51 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 99.51 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 99.5 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.49 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 99.47 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.46 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.46 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 99.45 | |
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 99.42 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 99.39 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 99.36 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.32 | |
| d1bdya_ | 123 | Domain from protein kinase C delta {Rat (Rattus no | 99.22 | |
| d2ptda_ | 296 | Phosphatidylinositol-specific phospholipase C {Bac | 99.19 | |
| d2plca_ | 274 | Phosphatidylinositol-specific phospholipase C {Lis | 98.87 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.86 | |
| d1vd6a1 | 217 | Putative glycerophosphodiester phosphodiesterase T | 96.3 | |
| d1zcca1 | 240 | Glycerophosphodiester phosphodiesterase UgpQ {Agro | 95.82 | |
| d1e7ua2 | 174 | Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) | 95.66 | |
| d1ydya1 | 328 | Glycerophosphodiester phosphodiesterase GlpQ {Esch | 94.51 | |
| d1o1za_ | 226 | Hypothetical protein TM1621 {Thermotoga maritima [ | 93.96 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 93.17 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 91.96 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 91.91 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 91.47 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 91.03 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 90.75 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 90.4 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 90.18 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 89.61 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 89.16 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 89.13 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 89.09 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 88.82 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 88.34 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 88.31 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 88.28 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 88.03 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 87.98 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 87.34 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 87.16 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 86.91 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 86.81 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 86.73 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 86.47 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 86.26 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 85.26 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 84.98 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 84.74 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 84.48 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 84.37 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 83.34 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 82.67 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 82.55 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 82.4 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 82.2 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 81.38 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 80.66 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 80.11 |
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-101 Score=808.43 Aligned_cols=321 Identities=33% Similarity=0.527 Sum_probs=259.5
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhc
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYA 191 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~A 191 (591)
+|||+||||+|||||||+|+||.|.||++||++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||++||
T Consensus 1 ~~PLs~YfI~SShNtyl~g~Ql~~~ss~~~~~~~l~~G~R~ielD~w~g~d-~ePvV~HG~t~ts~I~F~dvl~~Ik~~A 79 (327)
T d1qasa3 1 DQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAIRDYA 79 (327)
T ss_dssp CSCGGGEEEEEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEESCTTSCCCCEEHHHHHHHHHHHT
T ss_pred CCCcccceeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCccccceeHHHHHHHHHHhc
Confidence 689999999999999999999999999999999999999999999999976 4799999999999999999999999999
Q ss_pred cccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhhhhcc
Q 007734 192 FVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKEND 270 (591)
Q Consensus 192 F~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~ 270 (591)
|++|+|||||||||||+.+||.+||++|+++|||+||.++.+ ....+|||++||||||||+|+.....+......
T Consensus 80 F~~S~yPlILsLe~H~~~~qq~~ma~~l~~~fGd~L~~~~~~~~~~~~psp~~Lk~KIlik~K~~~~~~~~~~~~~---- 155 (327)
T d1qasa3 80 FKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENG---- 155 (327)
T ss_dssp TTSCSSCEEEEEEECCCHHHHHHHHHHHHHHTGGGBCCSCCTTCCSSCCCTGGGTTCEEEEECCCCC-------------
T ss_pred CCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhccCCCcccccccCCCHHHHhhhhhhcccccccccccccccC----
Confidence 999999999999999999999999999999999999997643 467899999999999999998764433221000
Q ss_pred ccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccccCCC
Q 007734 271 SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPD 350 (591)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 350 (591)
..+.+..+ ...... .++... .........+....+.+++++|+.|..++.++++.........
T Consensus 156 -----------~~~~~~~~---~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~~~~ 218 (327)
T d1qasa3 156 -----------SEATDVSD---EVEAAE-MEDEAV--RSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQA 218 (327)
T ss_dssp --------------------------------------------------CCCHHHHTTCSSEEECCCCCCCTTSSCSCC
T ss_pred -----------ccCCCccc---cccccc-cccchh--hhhhhcccchhhhHhhHHHHhHHHHhcCccCCCccchhhcCCc
Confidence 00000000 000000 000000 0000111122334578899999999888777777665444445
Q ss_pred ceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeeeeeec
Q 007734 351 KVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 430 (591)
Q Consensus 351 ~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~N 430 (591)
.++++|++|.++.+++++++.+|+.||+++|+||||+|+|+|||||||+.+|++|||||||||||.|.+||+|.|||+.|
T Consensus 219 ~~~~~S~sE~~~~~l~~~~~~~l~~~nk~~l~rvyP~g~ridSsNy~P~~~w~~G~Q~valN~Qt~D~~m~ln~~~F~~N 298 (327)
T d1qasa3 219 FYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 298 (327)
T ss_dssp TTEEEEEEHHHHHHHHHHHTHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHTTSG
T ss_pred ceeeeecCHHHHHHHHHHhhHHHHHHHHhheEEEecCCCCCCCCCCChHHHHhcCCcEEEEeccCCChhHHHHHHHHHhc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeeecCCcccCCCCCCCccCCCCC
Q 007734 431 GGCGYVKKPNFLLQTGPHNEVFDPKVK 457 (591)
Q Consensus 431 G~cGYVLKP~~lr~~~~~~~~f~p~~~ 457 (591)
|+|||||||++||++. ..|+|...
T Consensus 299 G~~GyVLKP~~Lr~~~---~~f~p~~~ 322 (327)
T d1qasa3 299 GGCGYVLKPAFLRDPN---TTFNSRAL 322 (327)
T ss_dssp GGCSEEECCGGGSCTT---CCCCTTSC
T ss_pred CCcceEECCHHHcCCC---CCcCCCCC
Confidence 9999999999999863 46888654
|
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-100 Score=801.69 Aligned_cols=331 Identities=29% Similarity=0.463 Sum_probs=250.6
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHH
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+||++||+||||+|||||||+|+|+.|.||+++|++||++||||||||||||. .+++|||+||+|+|++|+|+|||+||
T Consensus 1 ~DM~~PL~~y~I~SShNtyl~g~q~~~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~t~~i~f~~v~~~I 80 (349)
T d2zkmx4 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAI 80 (349)
T ss_dssp SCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCCCEEHHHHHHHH
T ss_pred CCCCCchhhheeeccccccccCCcCCCcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCeecCceEHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999984 34689999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccccEEEecCCCCchhhh
Q 007734 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (591)
++|||.+|+|||||+||+|| +++||.+||++|+++||++|+.++.+ ....+|||++||||||||+|+.......
T Consensus 81 ~~~aF~~s~~PliL~le~h~~~~~~q~~~a~~l~~~~g~~L~~~~~~~~~~~~~~~~pSP~~Lk~KIlik~K~~~~~~~~ 160 (349)
T d2zkmx4 81 AESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPT 160 (349)
T ss_dssp HHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC------
T ss_pred HHhcccCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHhhhccCcccccccCcCCCCCCHHHhcCcEEEEecCCcccccc
Confidence 99999999999999999999 79999999999999999999997633 2468999999999999999987543322
Q ss_pred hhhhhhhccccCCCCCCccccc-CCCCCCccccCCCCCCCCCCCCCCCCCC---------CccccccccccchhhccceE
Q 007734 262 KEEKEKENDSQRGKGSADEEAW-GKEVPNLKSLNNSACDKDDFDGGVDNDE---------EDSDDKSQHNEAPEYRKLIA 331 (591)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~ 331 (591)
....+...+.........+..+ +.+...+..... .++.+......+ .+........+.+++++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~ 236 (349)
T d2zkmx4 161 SSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEV----EEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVN 236 (349)
T ss_dssp ------------------------------------------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCS
T ss_pred ccccccccccccCCCCcccccccCccccccccccc----cccccccccccchhhhhhhccccccccccccchHHHHhhHh
Confidence 2111100000000000000000 000000000000 000000000000 00111122345678899988
Q ss_pred eecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeee
Q 007734 332 IHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAF 411 (591)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVAL 411 (591)
+.....+..+...... ...+.++||+|.++.++++.++.+|++||++||+||||+|+|+|||||||+.||++|||||||
T Consensus 237 y~~~~~~~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~li~~Nk~~L~RVYP~g~RvdSSNynP~~~W~~GcQ~VAL 315 (349)
T d2zkmx4 237 YIQPTKFVSFEFSAQK-NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVAL 315 (349)
T ss_dssp SCEECCCCCHHHHHHH-TCTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECB
T ss_pred hhcCCccccchhhccc-CcceEEEecCHHHHHHHHHHhHHHHHHHhhccEEEECcCCCcCCCCCCCcHHHHhcCccEeEe
Confidence 7766555555444433 335678999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcceeeeeeeeeecCceeeeecCCcccC
Q 007734 412 NMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 444 (591)
Q Consensus 412 N~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~ 444 (591)
||||.|++||||.|||+.||+|||||||++||+
T Consensus 316 N~Qt~D~~m~ln~g~F~~NG~cGYVLKP~~LR~ 348 (349)
T d2zkmx4 316 NFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348 (349)
T ss_dssp CTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTC
T ss_pred cccCCCHHHHHHHHHHHhcCCcCeEECCHHHCC
Confidence 999999999999999999999999999999996
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.5e-26 Score=206.31 Aligned_cols=114 Identities=31% Similarity=0.489 Sum_probs=98.0
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCcee-eeccc-c-CCCCCCccCcE-EEE-eeecCCccEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM-KKTKT-L-EDNWIPSWNEE-FEF-PLSVPELALLR 537 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k-~kTkv-i-~nn~NPvWNEt-f~F-~v~~pela~Lr 537 (591)
+|+|+||+|++|+. ...||||+|++.|.|.|..+ .+|++ + .|++||+|||+ |.| .+..+++++|+
T Consensus 2 tl~V~Visaq~L~~----------~~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~ 71 (122)
T d2zkmx2 2 TLSITVISGQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 71 (122)
T ss_dssp EEEEEEEEEESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred EEEEEEEEeeCCCC----------CCCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEE
Confidence 68999999999963 13699999999999887543 44544 3 45699999975 544 57789999999
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|||+| +++||++++||++|++|||||||+|+.|+++++|+|||||++
T Consensus 72 f~V~D~d----~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l~~~~L~v~i~~ 120 (122)
T d2zkmx2 72 VAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 120 (122)
T ss_dssp EEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEEECCC----CCEEEEEEEEcccCcCCceEEEccCCCcCCCCCceEEEEEEE
Confidence 9999975 789999999999999999999999999999999999999986
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=4.1e-26 Score=205.64 Aligned_cols=125 Identities=36% Similarity=0.571 Sum_probs=111.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEeeecCCccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
+.|+|+|++|++|+. .+.+..+.+||||+|++.|.+.+..++||++++++ +||.|||+|+|.+..++.+.|+|+|
T Consensus 4 ~~l~V~Vi~a~~L~~----~~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V 79 (131)
T d1qasa2 4 ERLRVRIISGQQLPK----VNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 79 (131)
T ss_dssp EEEEEEEEEEESCCC----CC-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred EEEEEEEEEeeCCCC----CCCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEE
Confidence 469999999999964 22345577899999999998888889999998766 8999999999999989999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..+++++||+++|||+++++||||+||+|+.|+++..++|||||++
T Consensus 80 ~D~d~~~~d~~iG~~~i~l~~l~~g~~~~~L~~~~g~~~~~~~L~v~i~~ 129 (131)
T d1qasa2 80 EDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 129 (131)
T ss_dssp EECCTTTCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEecCCCCCcEEEEEEEEEeccCCCCEEEECCCCCcCCCCCCEEEEEEEE
Confidence 99998888999999999999999999999999999999999999999986
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=1.6e-18 Score=146.76 Aligned_cols=91 Identities=21% Similarity=0.312 Sum_probs=80.9
Q ss_pred cCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCC
Q 007734 19 AASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (591)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~ 97 (591)
..+++|+||..||.+|+++ +.||+++|.+||+++|++..++.+.|++||++|++... ...++.||++||++||+|++
T Consensus 2 ~~l~~R~ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~--~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 2 KMLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp TTTSCCHHHHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHH--HHHTTBCCHHHHHHHHHSST
T ss_pred CCCCccHHHHHHHHHHhCCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHh--hhhcCCcCHHHHHHHHcCcc
Confidence 4678999999999999988 89999999999999999988999999999999995432 22357899999999999999
Q ss_pred CCCCCC-CCCcccCC
Q 007734 98 NPPLSP-TPVVHHDM 111 (591)
Q Consensus 98 n~~~~~-~~~v~qdM 111 (591)
|++++| |..|+|||
T Consensus 80 N~i~~p~~~~V~qDM 94 (94)
T d1qasa1 80 GNAFSLAHRRVYQDM 94 (94)
T ss_dssp TBSBCGGGGSCCSCC
T ss_pred cCCCCccccccCCCC
Confidence 999976 46899999
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.3e-17 Score=146.41 Aligned_cols=118 Identities=21% Similarity=0.354 Sum_probs=99.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+. ..|.|.||
T Consensus 6 G~L~V~v~~A~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~-~~L~i~V~ 73 (126)
T d2ep6a1 6 GILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVF 73 (126)
T ss_dssp EEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEcCC-----eEEEEEeeCCceeEEEEEEEEEEEeccC-ceeEEEEE
Confidence 579999999999964 24557789999999853 5789999999999999999999987664 67999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|++..+++++||++.++|+.+..|. ++.+|....++....++|.++++++
T Consensus 74 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~l~~~~~~~~~~G~i~l~~~~i 124 (126)
T d2ep6a1 74 DEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 124 (126)
T ss_dssp EEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EccCCcCcceEEEEEEEHHHCCCCCceEEEccccCCCCceeEEEEEEEEEE
Confidence 9998888899999999999999885 6777877666665567899998874
|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from cytosolic phospholipase A2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=4.4e-16 Score=137.75 Aligned_cols=118 Identities=24% Similarity=0.340 Sum_probs=92.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.+|+|+|+.|++|+.. ...+..+.+||||++.+.+. ...++||+++.++.||+|||+|.|.+..+....|+|.||
T Consensus 3 ~~l~V~v~~a~~L~~~---~~~d~~~~~Dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~ 77 (126)
T d1rlwa_ 3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTT--PDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTS--TTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEEccCCCCc---cccccCCCCCcEEEEEECCc--ccceeEeeecCCCccceeceeeeecccCcccCcEEEEEE
Confidence 5699999999999641 11244578899999998543 235678999999999999999999998777788999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|+|.. ++++||++.++|+.|..|.+ |++|.... .+.|.+++++
T Consensus 78 d~d~~-~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~g~i~~~l~~ 123 (126)
T d1rlwa_ 78 DANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQVT-----EMVLEMSLEV 123 (126)
T ss_dssp ECCSS-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTE-----EEEEEEEEEC
T ss_pred ECCCC-CCCeEEEEEEEHHHccCCCeEEEEEEccCCC-----eEEEEEEEEE
Confidence 99865 48999999999999988853 67885432 2456666554
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.61 E-value=1e-15 Score=136.68 Aligned_cols=106 Identities=26% Similarity=0.420 Sum_probs=90.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|.|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..++. ..|.|.|
T Consensus 15 ~~L~V~V~~a~~L~~------~d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 88 (132)
T d1a25a_ 15 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 88 (132)
T ss_dssp SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEE
Confidence 569999999999964 244567899999999876656678899999999999999999999876554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc--eEEEccC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHD 573 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~Gy--R~vpL~d 573 (591)
||+|..+++++||.+.|+|+.|..+- .|.+|.+
T Consensus 89 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~W~~L~~ 123 (132)
T d1a25a_ 89 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 123 (132)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred EecCCCCCCcEeEEEEEeHHHcCCCCCCeEEECCC
Confidence 99998888999999999999987653 4789987
|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: E3 ubiquitin-protein ligase Itchy species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=7.3e-15 Score=131.60 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=91.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
+.+|.|+|++|++++. .+..+.+||||+|.+.+ .++||++++++.||+|||.|.|.+.. ...|.|.|
T Consensus 5 ~~~L~v~v~~A~~~~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~~~~--~~~l~~~V 71 (133)
T d2nq3a1 5 KSQLQITVISAKLKEN------KKNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRV 71 (133)
T ss_dssp CEEEEEEEEEEEECCC------C--CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEE
T ss_pred ceEEEEEEEEeECCCc------CCCCCCcCeEEEEEECC-----eEEeeEEEEecccEEEcceEEEEEEe--cceeEEEE
Confidence 4679999999998853 13346689999999864 56899999999999999999999863 35799999
Q ss_pred EeccCCCCCCccEEEEEECCccC---Cc-----ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELK---QG-----IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~---~G-----yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..+++++||++.++|..+. .| ..++.|....+.....+.|.|.++.
T Consensus 72 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~~~~~~~~~G~L~v~l~~ 129 (133)
T d2nq3a1 72 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 129 (133)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCCCCCCceEEEEEEEEEee
Confidence 99999888999999999998762 22 2345566666666666788887764
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.52 E-value=1.2e-14 Score=130.20 Aligned_cols=115 Identities=23% Similarity=0.349 Sum_probs=89.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
.++|+|+|++|++|+. .+..+.+||||++.+.+ .+.+|+++++ +.||+|||+|.|.+..++ ..|+|.
T Consensus 9 ~G~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~t~~~~~~~~nP~Wne~f~f~v~~~~-~~L~v~ 76 (136)
T d1wfja_ 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEESSC-CEEEEE
T ss_pred cEEEEEEEEEeeCCCC------CCCCCCCCccEEEEEee-----eeEEEEEEecCCCcEEEeeEEEEEEcCcc-ceEEEE
Confidence 4689999999999953 34567899999998754 4667888775 789999999999998654 459999
Q ss_pred EEeccCCCCCCccEEEEEECCccC-Ccc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELK-QGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~-~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|||+|..+++++||.+.|||..+. .|. .+.+|. ..++. .+.|.+.++|
T Consensus 77 V~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~-~~~~~--~G~i~l~l~~ 128 (136)
T d1wfja_ 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEY--KGEIWVALSF 128 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEE--EEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEec-CCCcc--CEEEEEEEEE
Confidence 999998888999999999999873 333 455654 23333 3578887776
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=2.4e-14 Score=129.48 Aligned_cols=105 Identities=23% Similarity=0.281 Sum_probs=86.3
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+.+ ....+.+|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~V~V~~a~~L~~------~~~~g~~dpyV~v~l~~--~~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i 104 (143)
T d1rsya_ 33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEccCCCC------CCCCCCCCeEEEEEEcC--CCCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEEE
Confidence 3579999999999964 24456789999999875 33456799999999999999999999875543 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
.|||++..+++++||++.|+|..+..|. .|.+|.+
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~s 142 (143)
T d1rsya_ 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCCC
Confidence 9999998888899999999999997664 5677754
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=4.9e-15 Score=133.30 Aligned_cols=112 Identities=19% Similarity=0.147 Sum_probs=86.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 539 (591)
..|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||.|||+|.|.+...++ ..|.|.
T Consensus 15 ~~L~V~v~~a~~L~~------~~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i~ 88 (138)
T d1w15a_ 15 NTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 88 (138)
T ss_dssp TEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred CEEEEEEEEeECCCC------CCCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEEEEE
Confidence 469999999999964 234567899999999764444556789999999999999999999876554 469999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
|||.|..+++++||++.|++.+...|.+ |..|++..++++
T Consensus 89 v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~ll~~~~k~i 129 (138)
T d1w15a_ 89 VLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 129 (138)
T ss_dssp EEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEeCCCCCCCCEEEEEEEcchhCCchHHHHHHHHhCCCCee
Confidence 9999988889999999999998766654 345554445543
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=9.1e-15 Score=130.87 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=89.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~v~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v 87 (137)
T d2cm5a1 14 QGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 87 (137)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEECCCC------CCCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEE
Confidence 3569999999999964 234467899999999764445567899999999999999999999876654 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||.+..+++++||++.++++++..+.. |.+|.+..++++
T Consensus 88 ~v~~~~~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~v 129 (137)
T d2cm5a1 88 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKI 129 (137)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCE
T ss_pred EeeeCCCCCCCCEEEEEEeCccccCcchhhhhhHhhCCCCee
Confidence 99999988889999999999998766643 556776666553
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=1.6e-14 Score=129.99 Aligned_cols=109 Identities=18% Similarity=0.255 Sum_probs=86.4
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC---------ceeeeccccCCCCCCccCcEEEEeeec-C
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFPLSV-P 531 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d---------~~k~kTkvi~nn~NPvWNEtf~F~v~~-p 531 (591)
+.|.|+|+.|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||.|||+|.|.+.. .
T Consensus 18 ~~L~V~V~~A~~L~~------~d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 91 (142)
T d1rh8a_ 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEeECCCC------cCCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeeccc
Confidence 469999999999964 244577899999998543322 224689999999999999999997432 2
Q ss_pred --CccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCC
Q 007734 532 --ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 576 (591)
Q Consensus 532 --ela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g 576 (591)
....|.|.|||+|..+++++||++.|+|..+..+- +|.+|.+++.
T Consensus 92 ~~~~~~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~~~W~~L~~~~~ 141 (142)
T d1rh8a_ 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred ccCCCEEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCceEEEECcCcCC
Confidence 23579999999998888999999999999987553 6899987653
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.2e-13 Score=122.33 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=86.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|.+|+. .+.+||||+|.+.+. ....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~L~~---------~g~~dpyVkv~l~~~-~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~ 94 (138)
T d1wfma_ 25 KAELFVTRLEAVTSNH---------DGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECCCC---------SSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEcCCCCC---------CCCcCcEEEEEECCC-CCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEE
Confidence 3569999999998842 245799999999753 23456789999999999999999999876654 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEccCCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 575 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~ 575 (591)
.|||++..+++++||++.|+|..+..+ -.|.+|....
T Consensus 95 ~V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~~~~ 134 (138)
T d1wfma_ 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred EEeeecccccceeeeEEEEEhHHccCCCCceEeEeCCCCC
Confidence 999999888899999999999998644 3688998754
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=8.1e-14 Score=128.04 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=80.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~V~~a~~L~~------~~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i 97 (157)
T d1uowa_ 24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (157)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEEEccc------ccCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEEEE
Confidence 3569999999999964 234467899999998753333345689999999999999999999887764 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.|||.+..+++++||++.|++.+..
T Consensus 98 ~v~d~~~~~~~~~iG~~~i~l~~~~ 122 (157)
T d1uowa_ 98 TVLDYDKIGKNDAIGKVFVGYNSTG 122 (157)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCH
T ss_pred EEcccCCCCCCceeEEEEEecccCC
Confidence 9999998888999999999998753
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=6.8e-14 Score=124.44 Aligned_cols=105 Identities=21% Similarity=0.223 Sum_probs=83.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 17 ~~~L~V~V~~a~~L~~------~~~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v 88 (130)
T d1dqva1 17 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 88 (130)
T ss_dssp SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEeeeCCcc------ccCCCCcceEEEEEEcc--CCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEE
Confidence 4579999999999964 23456789999998854 33457899999999999999999999876554 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCc-cCC----cceEEEccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSE-LKQ----GIRAVPLHD 573 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~s-L~~----GyR~vpL~d 573 (591)
+|||++..+++++||++.|++.. +.. .-.|.+|.+
T Consensus 89 ~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~~ 128 (130)
T d1dqva1 89 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE 128 (130)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred EEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEeccc
Confidence 99999988889999999998643 322 224788875
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.5e-13 Score=121.24 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=79.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pel--a~Lr 537 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||.|||+|.|. +...++ ..|.
T Consensus 13 ~~~L~V~V~~a~~L~~------~~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~ 86 (125)
T d2bwqa1 13 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 86 (125)
T ss_dssp TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEE
Confidence 3569999999999964 234567899999999765555667899999999999999999997 554444 4799
Q ss_pred EEEEeccCC--CCCCccEEEEEECCccCCc--ceEEEc
Q 007734 538 IEVHEYDMS--EKDDFGGQTCLPVSELKQG--IRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~--~~dd~lGq~~ipL~sL~~G--yR~vpL 571 (591)
|.|||.+.. .++++||++.+||+.+... -.|.||
T Consensus 87 i~v~d~~~~~~~~~~~iG~~~i~l~~~~~~~~~~Wy~L 124 (125)
T d2bwqa1 87 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 124 (125)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCCCCCCCCeeEEEEEEEchhcCCCCCCEEEeC
Confidence 999998864 3456999999999987633 256776
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.42 E-value=5.4e-13 Score=119.59 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=88.6
Q ss_pred ceeEEEEEEeccccCcCC-----CCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccE
Q 007734 461 KKTLKVTVYMGEGWYYDF-----PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL 535 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~-----~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~ 535 (591)
.+.|+|+|+.|++|+... ........+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+ ..
T Consensus 5 ~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~----~~~~~T~~~~~t~~P~Wne~f~f~v~~~--~~ 78 (136)
T d1gmia_ 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred EEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCC----CcCcEeeEEcCCCCccCccEEEEEEecC--Cc
Confidence 467999999999996410 000112345689999999853 3456899999999999999999998643 57
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccCCc-----ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|.|||++..+++++||.+.++|+.|..+ .+|++|.. .+.+.++++|
T Consensus 79 l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L~p-------~G~v~l~v~~ 131 (136)
T d1gmia_ 79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDL 131 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeCCC-------CcEEEEEEEE
Confidence 999999999888899999999999988422 36788852 3567777765
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.1e-12 Score=117.81 Aligned_cols=95 Identities=22% Similarity=0.373 Sum_probs=76.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCCc--cEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pel--a~L 536 (591)
...|.|+|+.|++|+.. +.. ..+||||+|.+.+ ....++||++++++.||.|||+|.|. +...++ ..|
T Consensus 21 ~~~L~V~V~~a~~L~~~------d~~~~~~dpyV~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L 92 (138)
T d1ugka_ 21 RKAFVVNIKEARGLPAM------DEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCCC------BTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEecCCCCC------CCCCCccceEEEEEEcC--CCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceE
Confidence 35699999999999641 222 3479999999974 33457889999999999999999996 444443 479
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
+|.|||.|..+++++||++.|||+.+.
T Consensus 93 ~~~V~d~d~~~~~~~iG~~~i~L~~~~ 119 (138)
T d1ugka_ 93 HFTILSFDRFSRDDIIGEVLIPLSGIE 119 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCC
T ss_pred EEEEEECCCCCCCcEEEEEEEEccccc
Confidence 999999998888999999999999874
|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Unc-13 homolog A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.36 E-value=1.9e-12 Score=114.91 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=84.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|..|+++.. .+..||||.|.+.+ .+.+|+++++ .||+|||+|.|.+..++ ..|.|.||
T Consensus 2 ~~L~V~v~~a~~l~~---------~~~~dpYv~l~~~~-----~k~~T~~~k~-~nP~Wne~f~f~v~~~~-~~L~v~V~ 65 (128)
T d2cjta1 2 SLLCVGVKKAKFDGA---------QEKFNTYVTLKVQN-----VKSTTIAVRG-SQPSWEQDFMFEINRLD-LGLTVEVW 65 (128)
T ss_dssp EEEEEEEEEEECSSC---------GGGCEEEEEEEETT-----EEEECCCEES-SSCEEEEEEEEEECCCS-SEEEEEEE
T ss_pred eEEEEEEEEEECCCC---------CCCcCeEEEEEeCC-----EEEEEEEecC-CCCeEEEEEEEeecccc-ceEEEEEE
Confidence 358999999998843 12469999999853 5788888865 59999999999998775 45899999
Q ss_pred eccCCCCCCccEEEEEECCccCC----cc-eEEEccCC----CCCcc-----cCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQ----GI-RAVPLHDR----KGERY-----KSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~----Gy-R~vpL~d~----~g~~~-----~~asLlv~i~f 590 (591)
|++.. ++++||++.|||+.+.. |. .|++|..+ .|+.. .+.+|+++..|
T Consensus 66 d~~~~-~d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~~~~~~~~ll~~~~ 127 (128)
T d2cjta1 66 NKGLI-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 127 (128)
T ss_dssp ECCSS-CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred eCCCc-CCcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeeecCCCcEEEEEEEc
Confidence 99876 48999999999999853 23 68999642 34432 35688887766
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=2.2e-13 Score=123.18 Aligned_cols=113 Identities=17% Similarity=0.187 Sum_probs=88.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|.|+|+.|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 19 ~~~L~V~V~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v 92 (145)
T d1dqva2 19 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 92 (145)
T ss_dssp TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred CCEEEEEEEEEeCCCC------cCCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEEEE
Confidence 3569999999999964 234567899999998865555557899999999999999999998865443 56999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC-cce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQ-GIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~-GyR-~vpL~d~~g~~~ 579 (591)
.|+|.+..+++++||++.|++..+.. |.. |.+|.+..++++
T Consensus 93 ~v~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~l~~~p~~~i 135 (145)
T d1dqva2 93 AVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 135 (145)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred EEEecCCCCCCcEEEEEEECchHcCchhhHHHHHHHhCCCCee
Confidence 99999988889999999999998742 333 456665555543
|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C delta species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.22 E-value=3.4e-11 Score=105.96 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=74.0
Q ss_pred CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC-
Q 007734 485 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK- 563 (591)
Q Consensus 485 ~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~- 563 (591)
..+.+||||+|.+.+......+++|++++++.||+|||+|+|.+.. ...|.|.|||+| ++++|.+.+++..|.
T Consensus 20 ~~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~--~~~l~i~V~d~d----d~~~g~~~i~l~~l~~ 93 (123)
T d1bdya_ 20 EDDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EDPMSEVTVGVSVLAE 93 (123)
T ss_dssp CCCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHH
T ss_pred CCCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc--ccEEEEEEEEcc----ccccCccEEehhheee
Confidence 3467899999999775444455678899999999999999999864 357999999986 789999999998873
Q ss_pred ----Ccc---eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 564 ----QGI---RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 564 ----~Gy---R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
.|- .|++|. +.+.|.+.++|+
T Consensus 94 ~~~~~~~~~~~W~~L~-------~~Gkl~l~v~~f 121 (123)
T d1bdya_ 94 RCKKNNGKAEFWLDLQ-------PQAKVLMCVQYF 121 (123)
T ss_dssp HHHTTTTEEEEEEECB-------SSCEEEEEEEEE
T ss_pred ccccCCCcccEEEeCC-------CCEEEEEEEEEe
Confidence 333 577874 246788888874
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Probab=99.19 E-value=3.1e-12 Score=128.48 Aligned_cols=137 Identities=10% Similarity=0.128 Sum_probs=99.3
Q ss_pred CCcccceeeeccCcc--cccCCCC---CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007734 112 TAPVSHYFIYTGHNS--YLTGNQL---NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 112 ~~PLs~YfI~SSHNT--YL~g~Ql---~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
+.||+++.|-.|||+ |-++..+ .+.+-...+...|..|+|+++|||+...+ +++.++||.. ...++|.||++.
T Consensus 20 ~~~l~~l~ipGtHnS~t~~~~~~~~~~~s~~Q~~~i~~QL~~GvR~fDlrv~~~~~-~~~~~~Hg~~-~~~~~l~~vL~~ 97 (296)
T d2ptda_ 20 SIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPL-YLYVTLHEFINE 97 (296)
T ss_dssp TSBTTTSCEEEETTGGGTTCCCHHHHHHHCCCSSCHHHHHTTTCCEEEEEEEECTT-SCEEEEETTE-EEEEEHHHHHHH
T ss_pred CceeeheEeccccccccccCCCCcccccccCccchHHHHHHhCCcEEEEeeeecCC-CceEEEeCCc-cCCCcHHHHHHH
Confidence 569999999999997 4444322 12333456889999999999999986543 5688999864 445799999999
Q ss_pred HhhhccccCCCceEEeeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccccEEEecC
Q 007734 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (591)
|+++......-.|||+|+.++.. .....+.+.+.+.+++..... .....|++.+++||+++...
T Consensus 98 i~~Fl~~np~EvVil~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~ptL~e~~~k~~~l~~ 163 (296)
T d2ptda_ 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIFL---KTEGNIKLGDARGKIVLLKR 163 (296)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBC---CCCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHhCCCceEEEEEEeccCCccchHHHHHHHHHHHhccCcccc---cCCCCCChHHHccceeEEEE
Confidence 99999999999999999988743 222234444444444332221 23578999999999877644
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Probab=98.87 E-value=1.3e-09 Score=107.99 Aligned_cols=136 Identities=14% Similarity=0.288 Sum_probs=106.0
Q ss_pred CCcccceeeeccCcccccCCCCCC-------CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNS-------DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g-------~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi 184 (591)
+.||+|..|--|||++-......+ ..--..+..-|..|+|.++|++++ +..++||..+. ..+|.||+
T Consensus 13 ~~~l~~l~ipGtHnS~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GvR~~dlr~~~-----~~~~~Hg~~~~-~~~~~~~L 86 (274)
T d2plca_ 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIFL-NASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEEE-EEEHHHHH
T ss_pred CcEeeheecccccccccccCCCCCcccccccccccccHHHHHHhCCeEEEeeeCC-----ceEEEEEeecc-ceeHHHHH
Confidence 469999999999999532211110 011123677899999999999974 47899997664 47899999
Q ss_pred HHHhhhccccCCCceEEeecc-CCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecC
Q 007734 185 RSIKEYAFVASEYPVVITLED-HLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~-Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 253 (591)
+.|+++--....-.|||.++. +.+.+....+++.+.+.||+.++.++. .....+|+..+++|||+|-..
T Consensus 87 ~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ptl~e~~gk~vi~~~ 157 (274)
T d2plca_ 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCccccccCCCCChHHhCCCEEEEec
Confidence 999998877778899999965 777778888899999999999998653 334679999999999988653
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=2.3e-10 Score=105.99 Aligned_cols=82 Identities=24% Similarity=0.368 Sum_probs=56.5
Q ss_pred CCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHH
Q 007734 20 ASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAF 89 (591)
Q Consensus 20 ~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F 89 (591)
.+++|+||..+|..|..+ +.||.++|.+||.++|++.. ++.+.|.++|.+|++... ...++.||++||
T Consensus 73 ~l~~r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ls~d~F 150 (170)
T d2zkmx1 73 SLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI--NAQRGQLSPEGM 150 (170)
T ss_dssp HHSCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHH
T ss_pred ccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccc--cccCCeECHHHH
Confidence 446899999999999854 78999999999999999853 466889999999985321 123467999999
Q ss_pred HHHhccCCCCCCCC
Q 007734 90 FKYLFGDINPPLSP 103 (591)
Q Consensus 90 ~~~l~s~~n~~~~~ 103 (591)
++||+|++|++++|
T Consensus 151 ~~fL~S~en~i~~~ 164 (170)
T d2zkmx1 151 VWFLCGPENSVLAQ 164 (170)
T ss_dssp HHHHHSTTSCSBCG
T ss_pred HHHHcCccCCCCCh
Confidence 99999999999976
|
| >d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Putative glycerophosphodiester phosphodiesterase TTHB141 species: Thermus thermophilus [TaxId: 274]
Probab=96.30 E-value=0.004 Score=57.00 Aligned_cols=42 Identities=24% Similarity=0.378 Sum_probs=35.9
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
..-+-|.++|.+|+..||+.||+|||=-.| +.|||+|..|+.
T Consensus 12 ~~pENT~~a~~~a~~~G~~~iE~DV~~TkD-g~~vv~HD~~~~ 53 (217)
T d1vd6a1 12 KAKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTP 53 (217)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEET
T ss_pred CCCchhHHHHHHHHHcCCCEEEEEEEEecC-CCEEEecccccC
Confidence 345899999999999999999999996545 479999998765
|
| >d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase UgpQ species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.82 E-value=0.0034 Score=59.17 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|.++|..|+..||++||+|+|=-.| +.|||+|..++
T Consensus 15 pENT~~a~~~A~~~G~~~iE~Dv~~TkD-g~~Vv~HD~~l 53 (240)
T d1zcca1 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETL 53 (240)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBT
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEEecC-CCEEEeccccc
Confidence 4789999999999999999999997555 47999998875
|
| >d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase GlpQ species: Escherichia coli [TaxId: 562]
Probab=94.51 E-value=0.014 Score=56.62 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=35.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+.|.++|..|+..||-+||+|||=-.| +.|||+|-.+|.
T Consensus 16 PENTl~af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 55 (328)
T d1ydya1 16 PEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLD 55 (328)
T ss_dssp STTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCT
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeEccC-CcEEEECCchhh
Confidence 4889999999999999999999996555 469999999874
|
| >d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Hypothetical protein TM1621 species: Thermotoga maritima [TaxId: 2336]
Probab=93.96 E-value=0.027 Score=51.88 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..||+.||+|++--.| +.|||.|-.|+
T Consensus 17 ~pENT~~af~~a~~~g~~~iE~Dv~~T~D-g~~Vv~HD~~l 56 (226)
T d1o1za_ 17 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDL 56 (226)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEE
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEccC-CCEEeecccee
Confidence 45789999999999999999999997555 47999999876
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.17 E-value=0.028 Score=43.52 Aligned_cols=67 Identities=13% Similarity=0.274 Sum_probs=47.8
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
....+|..+|.+|+. + ++|++++|+..|+..-.....+.+.+..||...- .-+.+.+++++|..+|.
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D------~d~dG~Idf~EF~~l~~ 74 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELD------KNGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTC------CCSSSSEEHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHc------CCCCCcCcHHHHHHHHH
Confidence 346799999999973 3 6899999999999864322234445666766543 12346799999999875
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=91.96 E-value=0.14 Score=39.54 Aligned_cols=66 Identities=12% Similarity=0.403 Sum_probs=52.5
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.+..+|..+|..|=. + ++|+.++|+..|+.. +. ..+.+.+..+|..+... +.+.+++++|..+|..
T Consensus 12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~ev~~~~~~~D~d------~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GE-TITEDDIEELMKDGDKN------NDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTS-SS-CCCHHHHHHHHHHHCSS------SSSSEEHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhc-CC-CCCHHHHHHHHHHHCCC------CCCcEeHHHHHHHHHh
Confidence 456789999999964 3 899999999999863 44 47899999999987521 2467999999999863
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=91.91 E-value=0.13 Score=39.23 Aligned_cols=65 Identities=17% Similarity=0.403 Sum_probs=52.3
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++.+|..+|..|=.+ ..|+.++|+..|+.... ..+.+++..++..+-.. +.+.+++++|.++|.
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~e~~~~~~~~D~d------~~G~I~~~EF~~~m~ 72 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE--NLTEEELQEMIAEADRN------DDNEIDEDEFIRIMK 72 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC--CCCHHHHHHHHHHHCCS------SSSEECHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCC--CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 3567899999999643 89999999999997654 46888999999876421 246799999999986
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.47 E-value=0.1 Score=39.74 Aligned_cols=67 Identities=10% Similarity=0.290 Sum_probs=48.1
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++.||..+|+.|.. + ++|+.++|+..|+..-.....+...+.+++..+-.. +.+.++++.|+.+|.
T Consensus 2 ~s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d------~dG~I~f~EF~~~m~ 72 (76)
T d1qx2a_ 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKN------GDGEVSFEEFLVMMK 72 (76)
T ss_dssp CCHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTT------CSSEECHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcC------CCCcCcHHHHHHHHH
Confidence 467899999999953 3 689999999999875322112233577777775421 246799999999875
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=91.03 E-value=0.23 Score=39.49 Aligned_cols=63 Identities=16% Similarity=0.324 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..|..+|.+|+. + .+|+.++|+..|+.. -+. ..+.+.+.+|+..+-.+ +.+.+++++|..+|.
T Consensus 9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~-~~~~~~~~~i~~~~D~n------~DG~I~F~EF~~lm~ 79 (93)
T d3c1va1 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQKLMSNLDSN------RDNEVDFQEYCVFLS 79 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTT-CCSHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhcccc-CCCHHHHHHHHHHHcCC------CCCCCCHHHHHHHHH
Confidence 357899999974 2 469999999999863 122 35788889998886521 246799999999876
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=90.75 E-value=0.21 Score=40.18 Aligned_cols=63 Identities=11% Similarity=0.217 Sum_probs=46.6
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|++|+. + ++|+.++|+..|+..=.....+.+.+.+||...-. -+.+.+++++|..+|.
T Consensus 15 ~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~------d~DG~IdF~EF~~l~~ 81 (98)
T d1yuta1 15 TVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDV------NQDSELKFNEYWRLIG 81 (98)
T ss_dssp HHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCT------TCCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 57788999973 3 69999999999997643323355567788877541 2347899999999886
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=90.40 E-value=0.31 Score=40.85 Aligned_cols=64 Identities=14% Similarity=0.335 Sum_probs=50.1
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|-. + +.|+.++|+.+|.... . ..+.+++.+|+..+... +.+.+++++|.++|+|
T Consensus 81 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~i~~~~D~d------~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 81 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG-E-KLTDDEVDEMIREADID------GDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh-h-cCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHhcC
Confidence 3467889998843 3 8999999999998643 3 47889999999887521 2467999999999975
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=90.18 E-value=0.13 Score=38.32 Aligned_cols=63 Identities=13% Similarity=0.317 Sum_probs=50.3
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.||..+|..|-.+ ++|+.++|+..|+.- +...++.+.+..+|..+-.. +.+.+++++|+.+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~s~~e~~~~~~~~D~d------~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKV-GEEPLTDAEVEEAMKEADED------GNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTT-TTCCCCHHHHHHHHHHHCSS------GGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHh-CCCCCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 4789999999754 899999999999865 33357899999999886521 246899999999874
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=89.61 E-value=0.25 Score=40.22 Aligned_cols=68 Identities=18% Similarity=0.249 Sum_probs=52.7
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.....+|..+|+.|=.+ ++|+.++|..+|++-.. ....+.+.++.||+.+... +.+.+++++|..+|.
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d------~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 36 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKD------GDGMIGVDEFAAMIK 106 (107)
T ss_dssp GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHH
T ss_pred cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHc
Confidence 34678899999999643 89999999999976422 1246889999999887521 246899999999885
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=89.16 E-value=0.52 Score=36.97 Aligned_cols=63 Identities=19% Similarity=0.339 Sum_probs=45.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+|+.. .+|++++|+..|+++=.. ...+.+.+.+++...-. -+.+.++|++|..++.
T Consensus 9 ~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~------n~Dg~idF~EF~~li~ 78 (87)
T d1e8aa_ 9 GIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDA------NQDEQVDFQEFISLVA 78 (87)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCT------TCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcC------CCCCcCCHHHHHHHHH
Confidence 578899999852 469999999999874321 12356777888776531 2357899999998875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=89.13 E-value=0.34 Score=36.58 Aligned_cols=65 Identities=14% Similarity=0.353 Sum_probs=52.0
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+..+|..+|..|=. + ++|+..+|+..|+.- +. ..+.+++..+|..+-.. +.+.++++.|.++|.
T Consensus 6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-g~-~~~~~e~~~~~~~~D~d------~dg~I~~~EF~~~m~ 72 (75)
T d1jc2a_ 6 KSEEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVIEEDIEDLMKDSDKN------NDGRIDFDEFLKMME 72 (75)
T ss_dssp CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHCSS------SCSEECHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-CC-CccHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 355789999999953 3 999999999999874 34 57999999999987521 246799999999885
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=89.09 E-value=0.73 Score=36.34 Aligned_cols=63 Identities=14% Similarity=0.298 Sum_probs=45.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+||+. .+|++.+|+.+|+++=.. ...+...+..|+...-. -..+.+++.+|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~------n~Dg~vdF~EF~~li~ 79 (90)
T d3cr5x1 10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVA 79 (90)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCT------TSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 578899999843 679999999999875321 12346667778776542 2346799999988775
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=88.82 E-value=0.56 Score=36.51 Aligned_cols=63 Identities=16% Similarity=0.291 Sum_probs=44.4
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC----CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED----KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~----~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-|..+|.+||+. .+|+..+|+.+|+++=..- ..+...+..|+...-. -+.+.++|.+|..++.
T Consensus 11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~------n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDT------NADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHh
Confidence 477899999943 6899999999999853321 1234456667766542 2346799999998874
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.34 E-value=0.57 Score=40.92 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=48.6
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 27 i~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
|..+|.++++. +.+++++|+..|+..-... ..+.+.|+.||..+-.. +.+.|++++|...+.
T Consensus 2 ~~~~F~~~a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~------~~G~i~~~EF~~l~~ 67 (165)
T d1k94a_ 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRD------HTGKMGFNAFKELWA 67 (165)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTT------CSSCBCHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHhh
Confidence 67899999876 9999999999998754322 34678999999988521 347899999988653
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=88.31 E-value=0.11 Score=41.99 Aligned_cols=63 Identities=13% Similarity=0.229 Sum_probs=44.4
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-----CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-----KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-----~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|++|+.+ +.|+.++|+..|+.+.... ..+.+.+..||..+-. -..+.+++++|..+|.
T Consensus 11 ~l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~------n~DG~I~F~EF~~li~ 79 (100)
T d1psra_ 11 GMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK------NEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCT------TCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHH
Confidence 578899999866 8999999999999753220 1123345666665431 2347899999998875
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=88.28 E-value=0.3 Score=38.67 Aligned_cols=64 Identities=13% Similarity=0.322 Sum_probs=46.9
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..|..+|.+|..+ +.|+.++|..-|...... ...+.+.+.+|+..+-. -+.+.+++++|..+|.
T Consensus 9 e~l~~~F~~yd~ddG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~------n~DG~I~F~EF~~li~ 76 (92)
T d1a4pa_ 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIA 76 (92)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCT------TSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhC------CCCCCCcHHHHHHHHH
Confidence 3588899999877 999999999999763221 01245567888877642 2357899999998875
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.03 E-value=0.18 Score=41.20 Aligned_cols=68 Identities=16% Similarity=0.324 Sum_probs=52.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ-KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.+..++..+|..|=.+ ++|+.++|+.+|..-. .....+.+.+..|++.+-.. +.+.+++++|...|.|
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d------~dG~I~~~EF~~~m~s 108 (108)
T d1rroa_ 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCS------SSSSEEHHHHHHHHTC
T ss_pred CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHcC
Confidence 4667899999999644 8999999999997542 22346888999999987521 2468999999998864
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=87.98 E-value=0.67 Score=36.71 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|++|+.. .+|+.++|++.|+.+=.. ...+.+.+.+|+...-.+ +.+.+++++|..+|.
T Consensus 10 ~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n------~Dg~IdF~EF~~l~~ 79 (93)
T d1ksoa_ 10 AIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN------KDCEVDFVEYVRSLA 79 (93)
T ss_dssp HHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHT------TTCEECHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCC------CCCCCcHHHHHHHHH
Confidence 578899999842 379999999999975221 123567888888876522 346799999998876
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=87.34 E-value=0.38 Score=36.84 Aligned_cols=62 Identities=10% Similarity=0.274 Sum_probs=48.8
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.|++.+|..|=.+ +.|+.++|+..|+.-. ..+.+++.++|..+-.. +.+.++++.|..+|.+
T Consensus 6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg---~~~~~ei~~~~~~~D~d------~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 6 ADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD------GDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh---cCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHHH
Confidence 3678889999644 8999999999998653 35888999998887521 2467999999998864
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=87.16 E-value=0.61 Score=39.07 Aligned_cols=67 Identities=18% Similarity=0.372 Sum_probs=52.7
Q ss_pred CCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 20 ASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 20 ~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
......+|...|..|-.+ ++|+.++|+..|... ++ .++.+++.+|++.+.. +.+.++++.|++.|+|
T Consensus 71 ~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-g~-~lt~~e~~~l~~~~d~-------~dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GE-KLSNEEMDELLKGVPV-------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp SSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-HS-CSCHHHHHHHHHHTTC-------SSCCSTTTHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHc-CC-CCCHHHHHHHHHhhCC-------CCCEEeHHHHHHHHhc
Confidence 334556799999999643 899999999999865 44 4799999999987641 2367999999999985
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=86.91 E-value=0.27 Score=38.62 Aligned_cols=63 Identities=17% Similarity=0.304 Sum_probs=45.1
Q ss_pred hHHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..|..+|.+|+.. ..++.++|+.+|.++=+. ..+...+.+||...- .-+.+.+++++|..++.
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~-~~~~~~v~~i~~~~D------~n~DG~IdF~EF~~l~~ 76 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKGADVWFKELD------INTDGAVNFQEFLILVI 76 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTCHHHHHHHHC------TTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCC-ccchHHHHHHHHHhC------CCCCCcCcHHHHHHHHH
Confidence 3578899999842 468999999999875332 234455777777643 12357899999999875
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=86.81 E-value=0.58 Score=38.06 Aligned_cols=67 Identities=13% Similarity=0.250 Sum_probs=52.1
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+..+|..+|..|=.+ ++++.++|+.+|+.-. ++ ..+.+++.++|..+-.. +.+.+++++|.+.|.
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~~~~~e~~~~~~~~D~d------~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDSD------HDGKIGADEFAKMVA 107 (109)
T ss_dssp TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccC-cCCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHH
Confidence 44567899999999533 8999999999998642 33 47888999999887421 246899999999875
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.73 E-value=0.43 Score=34.85 Aligned_cols=61 Identities=16% Similarity=0.386 Sum_probs=48.1
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
.||..+|..|=.+ ++|+.++|+.-|+.- +. ..+.+.+..++..+... +.+.++++.|++.|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~l-g~-~~~~~e~~~l~~~~D~d------~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID------GDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHTTCTT------CSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHcCCC------CCCcEeHHHHHHHC
Confidence 5789999999543 899999999998864 44 47889999998876522 24679999999865
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=86.47 E-value=0.7 Score=35.25 Aligned_cols=61 Identities=21% Similarity=0.431 Sum_probs=47.7
Q ss_pred HHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
|+...|..|=. + +.|+.++|+..|+.- +. ..+.+.+.+++..+... +.+.++++.|+.+|.
T Consensus 15 el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~s~~e~~~~~~~~D~d------~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 15 EFKAAFDMFDADGGGDISTKELGTVMRML-GQ-NPTKEELDAIIEEVDED------GSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCTT------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEchhHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 56667888853 3 899999999999975 33 47899999999987521 246799999999875
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=86.26 E-value=0.73 Score=36.20 Aligned_cols=64 Identities=13% Similarity=0.215 Sum_probs=48.3
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..|..+|.+|+. + +.|+.++|+.-|+..-.. ...+.+.+..+|+.+-. -..+.+++++|..+|.
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~------d~dG~Idf~EF~~lm~ 79 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE------NGDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTT------TCCSEECSHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHH
Confidence 468889999963 2 589999999999876432 23577888888887642 1246799999998875
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.26 E-value=0.73 Score=33.68 Aligned_cols=61 Identities=15% Similarity=0.342 Sum_probs=48.5
Q ss_pred HHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++.+|+.|= .+ +.|+..+|+..|+.- +. ..+.+++..++..+... +.+.+++++|..+|.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~~i~~~~~~~D~d------~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SP-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CT-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHh-cc-ccchHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 4678999995 33 999999999999864 44 57899999999988521 246799999999875
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.98 E-value=1.2 Score=36.60 Aligned_cols=62 Identities=16% Similarity=0.392 Sum_probs=49.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
+.++..+|..+-.+ +.++.++|..+|.... ..++.+++..++..+... +.+.+++++|.++|
T Consensus 78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g--~~l~~~e~~~l~~~~D~d------~dG~i~~~EF~~~m 141 (141)
T d2obha1 78 KEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRD------GDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CCCCHHHHHHHHHHHCTT------SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHHhC--CCCCHHHHHHHHHHHCCC------CCCCEeHHHHHHhC
Confidence 45688889998644 8999999999998643 357899999999987522 24689999999876
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.74 E-value=0.48 Score=35.73 Aligned_cols=62 Identities=11% Similarity=0.303 Sum_probs=48.2
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|+..+|..|=. + +.|+.++|+..|+.. +. ..+.+.+.+++..+-. -+.+.+++++|+.+|.
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~t~~e~~~~~~~~D~------~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GL-SPSEAEVNDLMNEIDV------DGNHQIEFSEFLALMS 73 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-TC-CCCHHHHHHHHHTTCC------SSCCEEEHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEChHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 467777998853 3 899999999999875 34 4788899999887642 1246799999999875
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=84.48 E-value=0.69 Score=36.30 Aligned_cols=63 Identities=14% Similarity=0.344 Sum_probs=46.6
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|++|+. + .+|+..+|+..++.+-.. ...+.+.+.++|...-.+ +.+.+++++|...+.
T Consensus 10 ~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d------~Dg~IdF~EF~~l~~ 77 (89)
T d1k8ua_ 10 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRN------KDQEVNFQEYVTFLG 77 (89)
T ss_dssp HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHT------TTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCC------CCCCCcHHHHHHHHH
Confidence 57889999984 2 479999999999975422 123567788888876522 346799999998875
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=84.37 E-value=0.88 Score=36.89 Aligned_cols=68 Identities=12% Similarity=0.231 Sum_probs=51.8
Q ss_pred CCCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 21 SEAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+..++..+|..|=. + ++++.++|+.+|+.-.. ....+.+++.++|..+-. -+.+.+++++|..+|.
T Consensus 37 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~------d~dG~I~~~EF~~~m~ 107 (109)
T d1pvaa_ 37 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADK------DGDGKIGIDEFETLVH 107 (109)
T ss_dssp TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCC------CCcCcEeHHHHHHHHH
Confidence 3456789999999953 3 89999999999975432 124688899999987642 1347899999999986
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=83.34 E-value=0.85 Score=36.34 Aligned_cols=61 Identities=11% Similarity=0.216 Sum_probs=42.8
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+||. + .+|+..+|+..|++ .+.. .+.+.+..|+...-. -+.+.++|.+|..++.
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~--~d~~~vd~im~~LD~------n~Dg~vdF~EF~~li~ 79 (95)
T d1qlsa_ 10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQ--KDPGVLDRMMKKLDL------DSDGQLDFQEFLNLIG 79 (95)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHC--CCTHHHHHHHHHHCT------TCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHH
Confidence 57789999994 2 68999999998864 1111 134567777776542 2346799999988775
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=82.67 E-value=0.78 Score=36.49 Aligned_cols=63 Identities=14% Similarity=0.267 Sum_probs=43.3
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+||+. .+|++.+|+.+|+++=..- ..+.+.+..|+...-. -+.+.++|.+|..++.
T Consensus 10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~------n~Dg~vdF~EF~~li~ 79 (94)
T d1j55a_ 10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDA------NGDAQVDFSEFIVFVA 79 (94)
T ss_dssp HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCS------SSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC------CCCCcCCHHHHHHHHH
Confidence 578899999853 5899999999998743321 1123456667666532 2347899999998875
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=82.55 E-value=1.6 Score=38.10 Aligned_cols=72 Identities=10% Similarity=0.137 Sum_probs=56.6
Q ss_pred ccCccCCCCchHHHHHHHHh-hCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHH
Q 007734 15 RFHVAASEAPDAVKSMFDQY-SEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKY 92 (591)
Q Consensus 15 ~~~~~~~~~r~ei~~if~~~-~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~ 92 (591)
.|-+.+.+...+|..+|..+ ..+ +.++.++|...|+... ...+.+.+..|+..+... ..+.+++..|..+
T Consensus 8 ~p~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~--~~~s~~~~~~l~~~~d~d------~~~~i~~~ef~~~ 79 (182)
T d1y1xa_ 8 APSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAG--VPFSLATTEKLLHMYDKN------HSGEITFDEFKDL 79 (182)
T ss_dssp STTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTT--BCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhc--ccCchhhhhhhhcccccc------ccccccccccccc
Confidence 56677778889999999998 444 9999999999997532 347889999999887521 2357999999887
Q ss_pred hc
Q 007734 93 LF 94 (591)
Q Consensus 93 l~ 94 (591)
+.
T Consensus 80 ~~ 81 (182)
T d1y1xa_ 80 HH 81 (182)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=82.40 E-value=1.5 Score=33.43 Aligned_cols=62 Identities=18% Similarity=0.393 Sum_probs=48.3
Q ss_pred hHHHHHHHHhh-C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+++..|..|- . . +.|+..+|+.-|+. -+. ..+.+++.++|..+-. -..+.+++++|+.+|.
T Consensus 15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~-lg~-~~t~~el~~~i~~~D~------d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 15 NEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQ-NPTPEELQEMIDEVDE------DGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHHHHHHTTTCTTSSBCHHHHHHHHHH-TTC-CCCHHHHHHHHHTTCT------TCCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCeEeHHHHHHHHHH-cCC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 57778899984 3 3 68999999999975 444 4689999999987642 1246799999999875
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=82.20 E-value=1.8 Score=36.61 Aligned_cols=64 Identities=16% Similarity=0.396 Sum_probs=48.5
Q ss_pred chHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..++..+|..|= .+ ++|+.++|+.+|... +. ..+.+.+..||..+... +.+.+++++|.++|.+
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~-~~-~~~~~~~~~l~~~~D~d------~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh-CC-CCCHHHHHHHHHHhCCC------CCCcEEHHHHHHHHHc
Confidence 345677788883 33 899999999999853 33 46888999999887521 2478999999999853
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=81.38 E-value=1 Score=37.63 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
....+|..+|..|-.+ +.|+.++|+..|.. -++ ..+.+++..++.... -+.+.+++++|+++|++
T Consensus 78 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~-~~~~~e~~~l~~~~~-------d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 78 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT-LGE-KMTEEEVEELMKGQE-------DSNGCINYEAFVKHIMS 144 (145)
T ss_pred chHHHHHHHHHHhhcCCCCEEcHHHHHHHHHH-hCC-CCCHHHHHHHHhhcC-------CCCCeEEHHHHHHHHhc
Confidence 3566789999999643 89999999999975 455 578999999886422 12357999999999875
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.66 E-value=0.98 Score=37.72 Aligned_cols=63 Identities=13% Similarity=0.315 Sum_probs=49.8
Q ss_pred CchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 23 APDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 23 ~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
++.++..+|+.|=. + ++|+.++|+..|..... .++.+.+.+|+..+. . +.+.++++.|..+|.
T Consensus 81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~~~~~~~~~~d-d------~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE--KLTDAEVDDMLREVS-D------GSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC--SCCHHHHHHHHHHHC-C------SSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--cccHHHHHHHHHhcc-C------CCCeEeHHHHHHHhC
Confidence 35678899999953 3 89999999999987654 478899999998775 1 235699999999873
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=80.11 E-value=1.7 Score=34.89 Aligned_cols=67 Identities=16% Similarity=0.266 Sum_probs=52.3
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+..++..+|..|=. + ++++.++|+.+|+.-.. ....+.+.+..|++.+-.. +.+.+++++|...|.
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d------~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKD------GDGKIGVEEFSTLVA 107 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 456788999999953 3 89999999999987542 2246888999999988521 246799999999886
|