Citrus Sinensis ID: 007771
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| 359473242 | 623 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.934 | 0.576 | 0.0 | |
| 255568860 | 581 | conserved hypothetical protein [Ricinus | 0.940 | 0.955 | 0.619 | 0.0 | |
| 356497747 | 525 | PREDICTED: uncharacterized protein LOC10 | 0.881 | 0.990 | 0.574 | 0.0 | |
| 356502030 | 535 | PREDICTED: uncharacterized protein LOC10 | 0.894 | 0.986 | 0.573 | 0.0 | |
| 22330347 | 541 | uncharacterized protein [Arabidopsis tha | 0.9 | 0.981 | 0.561 | 1e-179 | |
| 297739080 | 357 | unnamed protein product [Vitis vinifera] | 0.605 | 1.0 | 0.801 | 1e-179 | |
| 357485803 | 493 | hypothetical protein MTR_5g033800 [Medic | 0.666 | 0.797 | 0.717 | 1e-176 | |
| 297837415 | 519 | hypothetical protein ARALYDRAFT_475253 [ | 0.854 | 0.971 | 0.552 | 1e-176 | |
| 356565980 | 575 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.911 | 0.541 | 1e-173 | |
| 449450630 | 553 | PREDICTED: uncharacterized protein LOC10 | 0.652 | 0.696 | 0.714 | 1e-170 |
| >gi|359473242|ref|XP_002265658.2| PREDICTED: uncharacterized protein LOC100249925 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/631 (57%), Positives = 447/631 (70%), Gaps = 49/631 (7%)
Query: 1 MESRKVAFTEQLLSPRRKVVSGFGLGVAATVIVFVVLLLSNSLKAPAVSPLFQGFNLVRV 60
ME +K+ F+EQ+LSP+RKVVSGF LG+ A++IV ++ + S P +F+GF+
Sbjct: 1 MEWKKLGFSEQILSPKRKVVSGFALGLGASLIVLTIVSFNTSFNVP----MFRGFSNFGA 56
Query: 61 INNNSSRVVSWPFSFTTAVSNDTGVSV------------SGGRQADSS-------VDLVG 101
N++ + S +++ ++ T ++ GR DS+ +D G
Sbjct: 57 SNSSLASWSFSFSSTSSSTASPTNATLDFHDSADFKQGTEDGRVVDSTPQASLSGMDKDG 116
Query: 102 KPQGANVSNEIAHLGNLTQEAEVGSIL----------EANASAVSRNGNFSDSSADKV-- 149
P G + E HLGN ++ + GS A+AS + + S+S+ + +
Sbjct: 117 DPLG--IVLEKTHLGNTSEMVKNGSFTVDGGWIPETTHADASGTATKASLSNSNVEGMTS 174
Query: 150 ------NFSHTVNNGSFPVEEGRSCGNCSLVVKGDVNSKEI---GSQFVNNTSYVNSKV- 199
N S VNNGS P EEG G L G+ + +I + V N SY
Sbjct: 175 DMAILGNSSEMVNNGSSPGEEGTVIGKTGL--GGNTSDGKIFVAENNNVGNLSYSGEYTK 232
Query: 200 PDNNNVTNFSGDGGSLNDSNNKITNPRYDSEPTKMHGSSYDKCNIFDGRWVRDDSKPYYP 259
P + +G+ +NNKIT Y S+ KM S Y C+IFDGRWVRDDSKPYYP
Sbjct: 233 PPTEEESGTAGNDAGKATTNNKITATHYHSQLKKMPNSFYGGCDIFDGRWVRDDSKPYYP 292
Query: 260 PGSCPYIDRDFDCHLNGRPDDGFVKWKWQPNGCDIPSLNATDFLERLRGKKLVFVGDSLN 319
GSCPYIDRDFDCHLNGRPDD ++KW+WQPNGCDIPSLNATDFLERLRGKKL+FVGDSLN
Sbjct: 293 AGSCPYIDRDFDCHLNGRPDDDYLKWRWQPNGCDIPSLNATDFLERLRGKKLIFVGDSLN 352
Query: 320 RNMWESLVCILRNSIRNKKRVYEISGRREFKKKGFYAFIFEDYNCTVDFVSSPFLVRESS 379
RNMWES+VCILR+S+ +KKRVYEISGR+EFKKKGFYAF FEDYNC+VDFV++PFLV+ESS
Sbjct: 353 RNMWESMVCILRHSVEDKKRVYEISGRKEFKKKGFYAFRFEDYNCSVDFVNAPFLVQESS 412
Query: 380 FTGRNGTFETLRLDLMDRTTSMYQDADVIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLK 439
F GRN TFETLRLD MD++T+ + DAD+I+FNTGHWWTHEKTSRGE YYQEGN+VHPRLK
Sbjct: 413 FNGRNRTFETLRLDEMDKSTTTFHDADIIVFNTGHWWTHEKTSRGEYYYQEGNYVHPRLK 472
Query: 440 VLEAYKRALTTWARWVDKNVDHNRTKVFFRGYSVTHFKGGQWNSGGQCHKETEPIFNVTY 499
VL+AY +ALTTWARWVDKN++ N T+VFFRGYS+THFKGGQWNSGGQCHKE EPIFN +
Sbjct: 473 VLKAYTKALTTWARWVDKNINSNMTQVFFRGYSITHFKGGQWNSGGQCHKEVEPIFNEAF 532
Query: 500 LAKYPSKMRALEYMLPEMKTPVVYLNISRLTDFRKDGHPSIYRMEYKNDQERIAAVNAQD 559
+ KYPSKMRALE +L M+TPV YLN+SRLTD+RKDGHPSIYR EYK +E IAAV++QD
Sbjct: 533 IRKYPSKMRALEPVLQMMRTPVTYLNVSRLTDYRKDGHPSIYRKEYKTVEEEIAAVHSQD 592
Query: 560 CSHWCLPGVPDTWNELLYVSLLKTGRESWKS 590
CSHWCLPGVPDTWNELLY SLL+ GR SW S
Sbjct: 593 CSHWCLPGVPDTWNELLYASLLQIGRGSWGS 623
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568860|ref|XP_002525401.1| conserved hypothetical protein [Ricinus communis] gi|223535364|gb|EEF37039.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356497747|ref|XP_003517720.1| PREDICTED: uncharacterized protein LOC100804622 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356502030|ref|XP_003519825.1| PREDICTED: uncharacterized protein LOC100801114 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|22330347|ref|NP_176278.2| uncharacterized protein [Arabidopsis thaliana] gi|17979149|gb|AAL49770.1| unknown protein [Arabidopsis thaliana] gi|22136764|gb|AAM91701.1| unknown protein [Arabidopsis thaliana] gi|332195612|gb|AEE33733.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297739080|emb|CBI28569.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357485803|ref|XP_003613189.1| hypothetical protein MTR_5g033800 [Medicago truncatula] gi|355514524|gb|AES96147.1| hypothetical protein MTR_5g033800 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297837415|ref|XP_002886589.1| hypothetical protein ARALYDRAFT_475253 [Arabidopsis lyrata subsp. lyrata] gi|297332430|gb|EFH62848.1| hypothetical protein ARALYDRAFT_475253 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356565980|ref|XP_003551213.1| PREDICTED: uncharacterized protein LOC100811395 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449450630|ref|XP_004143065.1| PREDICTED: uncharacterized protein LOC101210768 [Cucumis sativus] gi|449494592|ref|XP_004159591.1| PREDICTED: uncharacterized LOC101210768 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| TAIR|locus:2036631 | 541 | TBL2 "AT1G60790" [Arabidopsis | 0.788 | 0.859 | 0.634 | 5.1e-177 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.932 | 0.904 | 0.441 | 7e-125 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.749 | 0.794 | 0.511 | 7.2e-123 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.608 | 0.785 | 0.544 | 1.6e-111 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.572 | 0.696 | 0.508 | 4.4e-107 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.594 | 0.738 | 0.498 | 1.2e-99 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.567 | 0.721 | 0.457 | 1.8e-85 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.569 | 0.716 | 0.46 | 2.4e-83 | |
| TAIR|locus:2080767 | 427 | TBL8 "AT3G11570" [Arabidopsis | 0.577 | 0.798 | 0.427 | 7.9e-78 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.538 | 0.885 | 0.418 | 9.6e-73 |
| TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1617 (574.3 bits), Expect = 5.1e-177, Sum P(2) = 5.1e-177
Identities = 309/487 (63%), Positives = 368/487 (75%)
Query: 107 NVSNEIAHLGNLTQEAEVGSILEANASAVSRNGNFSDSSADKVNFSHTVNNGSFPVEEGR 166
N E+ +L + + +V S + +A S+N S+ S KV + ++G G
Sbjct: 72 NEKPEVVNLTDKVPDVKVPSFVVPDAG--SKNTTLSEES--KVP---SFDSGQ---RSGE 121
Query: 167 SCGNCSLVVKGDVNSKEIGSQFVNNTSYVNSKVPDNNNVTNFSGDGGSLNDSNNKITNPR 226
+ N SL +G N Q NT N+ N+ + S GG N T+
Sbjct: 122 TVKNSSLAEEG--NGSVADDQ---NTLEANATTSVGNSSSLVSDLGGRFVVPAN--TSKE 174
Query: 227 YDSEPTKMHGSSYDKCNIFDGRWVR--DDSKPYYPPGSCPYIDRDFDCHLNGRPDDGFVK 284
S SY+ C+I+DG WVR D++ PYYPPGSCPYIDRDF+CH NGRPDD +VK
Sbjct: 175 NGSVTEDRSRGSYEDCDIYDGSWVRADDETMPYYPPGSCPYIDRDFNCHANGRPDDAYVK 234
Query: 285 WKWQPNGCDIPSLNATDFLERLRGKKLVFVGDSLNRNMWESLVCILRNSIRNKKRVYEIS 344
W+WQPNGCDIP LN TDFLE+LRGKKLVFVGDS+NRNMWESL+CILR+S+++KKRVYEIS
Sbjct: 235 WRWQPNGCDIPRLNGTDFLEKLRGKKLVFVGDSINRNMWESLICILRHSLKDKKRVYEIS 294
Query: 345 GRREFKKKGFYAFIFEDYNCTVDFVSSPFLVRESSFTGRNGT-FETLRLDLMDRTTSMYQ 403
GRREFKKKGFYAF FEDYNCTVDFV SPF VRESSF G NGT ETLRLD+MD+TTSMY+
Sbjct: 295 GRREFKKKGFYAFRFEDYNCTVDFVGSPFFVRESSFKGVNGTTLETLRLDMMDKTTSMYR 354
Query: 404 DADVIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNR 463
DAD++IFNTGHWWTH+KT GE+YYQEGN V+PRLKVLEAYKRAL TWA+WVDKN+D ++
Sbjct: 355 DADILIFNTGHWWTHDKTKLGENYYQEGNVVYPRLKVLEAYKRALITWAKWVDKNIDRSQ 414
Query: 464 TKVFFRGYSVTHFKGGQWNSGGQCHKETEPIFNVTYLAKYPSKMRALEYMLPE-MKTPVV 522
T + FRGYSVTHF+GG WNSGGQCHKETEPIFN +YLAKYPSKM+ALEY+L + MKTPV+
Sbjct: 415 THIVFRGYSVTHFRGGPWNSGGQCHKETEPIFNTSYLAKYPSKMKALEYILRDTMKTPVI 474
Query: 523 YLNISRLTDFRKDGHPSIYRMEYKNDQERIAAVNAQDCSHWCLPGVPDTWNELLYVSLLK 582
Y+NISRLTDFRKDGHPSIYRM Y+ ++E+ AV+ QDCSHWCLPGVPDTWN+LLYVSLLK
Sbjct: 475 YMNISRLTDFRKDGHPSIYRMVYRTEKEKREAVSHQDCSHWCLPGVPDTWNQLLYVSLLK 534
Query: 583 TGRES-W 588
G S W
Sbjct: 535 AGLASKW 541
|
|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00002752001 | SubName- Full=Chromosome chr1 scaffold_135, whole genome shotgun sequence; (630 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-106 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-105 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-26 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 320 bits (823), Expect = e-106
Identities = 133/290 (45%), Positives = 180/290 (62%), Gaps = 23/290 (7%)
Query: 294 IPSLNATDFLERLRGKKLVFVGDSLNRNMWESLVCILRNSIRNKKRVYEISGRREFKKKG 353
+P +A FLERLRGK++VFVGDSL+RN WESLVC+L K + E GR
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGR------- 53
Query: 354 FYAFIFEDYNCTVDFVSSPFLVRESSFTGRNGTFETLRLDLMD-RTTSMYQDADVIIFNT 412
+ F F+DYN T++F SPFLV + L+LD +D + + ++ ADV++FN+
Sbjct: 54 LFRFRFKDYNVTIEFYWSPFLVESDNAE---EGKRVLKLDSIDEKWSKLWPGADVLVFNS 110
Query: 413 GHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNRTKVFFRGYS 472
GHWW H K G DY Q+ N+ + L+AY++AL TWA+WVD N+ ++T+VFFR +S
Sbjct: 111 GHWWLHRKVYIGWDYCQKSNYKE--MGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFS 168
Query: 473 VTHFKGGQWNSGGQCHKETEPIFNVTYLAKYPSKMRALEYML--PEMKTPVVYLNISRLT 530
HF+GG+WN+GG C+ ETEP+ Y P + + +L MKTPV L+I+ L+
Sbjct: 169 PVHFEGGEWNTGGSCY-ETEPLLGSEYKGLTPEMIDIVNEVLSRAAMKTPVKLLDITLLS 227
Query: 531 DFRKDGHPSIYRMEYKNDQERIAAVNAQDCSHWCLPGVPDTWNELLYVSL 580
+RKDGHPS+YR +E QDC HWCLPGVPDTWNELL L
Sbjct: 228 QYRKDGHPSVYRKPGPPKKE-------QDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.89 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.49 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 93.75 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 92.62 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 92.47 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-107 Score=863.70 Aligned_cols=333 Identities=41% Similarity=0.916 Sum_probs=298.3
Q ss_pred CCCCCCccccCCcccCCCCCCCCCCCCC-CCCCCcCccCCCCCCCccceeeeecCCCCCCCCCHHHHHHHHcCCeEEEEe
Q 007771 237 SSYDKCNIFDGRWVRDDSKPYYPPGSCP-YIDRDFDCHLNGRPDDGFVKWKWQPNGCDIPSLNATDFLERLRGKKLVFVG 315 (590)
Q Consensus 237 ~~~~~CDlf~G~WV~D~s~PlY~~~sCP-~I~~~~nC~~NGRPD~~Yl~WRWQP~gC~LPrFDa~~FLe~LRGKrL~FVG 315 (590)
...+.||||+|+||+|+++|+|++.+|| ||+++|||++|||||.+|++|||||++|+||||||.+|||+||||||||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 3447899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHhhccccccceEeecCccceeeccceEEEeeccceEEEEEeccccccccccCCCCCceeeeeeccc
Q 007771 316 DSLNRNMWESLVCILRNSIRNKKRVYEISGRREFKKKGFYAFIFEDYNCTVDFVSSPFLVRESSFTGRNGTFETLRLDLM 395 (590)
Q Consensus 316 DSL~Rnq~eSLlCLL~~~v~~~~~v~e~sg~~~~k~~g~~~~rf~dyNvTV~fywsPfLV~~~~~~~~~g~~~~l~LD~i 395 (590)
|||+|||||||+|||+++++...+.+. +..+...|+|++||+||+|||+||||+.+... ..+.++||++
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~-------~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~----~~~~l~LD~i 196 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMS-------RGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ----GKRVLKLEEI 196 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeee-------cCCceEEEEeccCCEEEEEEecceEEeeecCC----CceeEEecCc
Confidence 999999999999999998765432221 12235689999999999999999999876432 2467999999
Q ss_pred ccccccCCCccEEEEeccccccccccCCCccccccCcceecCccHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecccCC
Q 007771 396 DRTTSMYQDADVIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNRTKVFFRGYSVTH 475 (590)
Q Consensus 396 D~~~~~~~~~DVLVfNTGhWw~~~k~~~~~~yfe~G~~v~~~m~~~~AyrkALrT~arwVd~~id~~kt~VFfRT~SP~H 475 (590)
|..+..|.++|||||||||||.+.+..+++.||+.|+.++++|++..||++||+||++||++++++.+|+|||||+||+|
T Consensus 197 d~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~H 276 (387)
T PLN02629 197 SGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTH 276 (387)
T ss_pred chhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCccc
Confidence 98888999999999999999999888888899999999999999999999999999999999999989999999999999
Q ss_pred CCCCCCCCCC-----CCCCcccccccccccccCchHHHHHHHHhcccCCceEEeecccccCCCcCCCCccccccccchhh
Q 007771 476 FKGGQWNSGG-----QCHKETEPIFNVTYLAKYPSKMRALEYMLPEMKTPVVYLNISRLTDFRKDGHPSIYRMEYKNDQE 550 (590)
Q Consensus 476 FegG~Wn~GG-----~C~~~T~Pl~~~~~~~~~~~~~r~ie~vl~~~k~~V~lLDIT~LS~~R~DgHPs~Y~~~~~~~~~ 550 (590)
|+||+||+|| +|+++|+|+.++.+.+....+|+++|++++.++.+|++||||+||++|+|||||+|+..++.+ +
T Consensus 277 fe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~-~ 355 (387)
T PLN02629 277 YNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPS-Q 355 (387)
T ss_pred ccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchh-h
Confidence 9999999874 698999999877776667778889999999999999999999999999999999998654332 2
Q ss_pred hhccCCCCCcccccCCCchhHHHHHHHHHHH
Q 007771 551 RIAAVNAQDCSHWCLPGVPDTWNELLYVSLL 581 (590)
Q Consensus 551 ~~~~~~~~DClHWCLPGvpDtWNelLya~L~ 581 (590)
+..+..++||+||||||||||||||||++|+
T Consensus 356 ~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 356 RANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred ccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 3334567999999999999999999999987
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 1e-07
Identities = 58/418 (13%), Positives = 119/418 (28%), Gaps = 112/418 (26%)
Query: 228 DSEPTKMHGSSYDKCNIF--------DGRWVRDDSKPYYPPGSCPYI----------DRD 269
D E + D ++F D + V+D K +I R
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 270 FDCHLNGRPDDG---FV--------KWKWQP--NGCDIPSLNATDFLE---RLRGKKLVF 313
F L + ++ FV K+ P PS+ ++E RL VF
Sbjct: 68 FWT-LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 314 VGDSLNRNMWESLVCILRNSIRNKKR-----VYEISGRREFKKKGFYAFIFEDYNCTVDF 368
+++R LR ++ + + + G K + Y
Sbjct: 127 AKYNVSR---LQPYLKLRQALLELRPAKNVLIDGVLG---SGKTWVALDVCLSYKVQCKM 180
Query: 369 VSSPFLVRESSF---TGRNGTFETLRLDLMDRTTSMYQDADVIIFNTGHWWTHEKTSRGE 425
F + F + E +++ + D ++
Sbjct: 181 ---DFKI----FWLNLKNCNSPE----TVLEMLQKLLYQIDPNW--------TSRSDHSS 221
Query: 426 DYYQEGNFVHPRLKVL---EAYKRALT----TWARWVDKNVDHN-RTKVFFRGYSVTHFK 477
+ + + L+ L + Y+ L + + + + R VT F
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281
Query: 478 GGQW--------NSGGQCHKETEPIFNVTYLAKYPSKMRALEYMLP-EMKT--PVVYLNI 526
+S E + + KY R + LP E+ T P +
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLL-----LKY-LDCRPQD--LPREVLTTNP---RRL 330
Query: 527 SRLTDFRKDGHPSI--YRMEYKNDQERI--AAVNAQDCSHWCLPGVPDTWNELLYVSL 580
S + + +DG + ++ + I +++N + P + + ++ L
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE---------PAEYRK-MFDRL 378
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.75 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 93.96 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0042 Score=57.80 Aligned_cols=51 Identities=20% Similarity=0.289 Sum_probs=35.3
Q ss_pred CCccEEEEeccccccccccCCCccccccCcceecCccHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecccCC
Q 007771 403 QDADVIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNRTKVFFRGYSVTH 475 (590)
Q Consensus 403 ~~~DVLVfNTGhWw~~~k~~~~~~yfe~G~~v~~~m~~~~AyrkALrT~arwVd~~id~~kt~VFfRT~SP~H 475 (590)
..+|+|||+.|..=.. ...+.|++.|+.+.+.+.+. .+.++++|-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCc
Confidence 4689999999975110 12456888888777766543 346789999888865
|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.59 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 95.88 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.59 E-value=0.0038 Score=56.14 Aligned_cols=141 Identities=11% Similarity=0.075 Sum_probs=67.4
Q ss_pred cCCCccEEEEeccccccccccCCCccccccCcceecCccHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecccCCCCCCC
Q 007771 401 MYQDADVIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNRTKVFFRGYSVTHFKGGQ 480 (590)
Q Consensus 401 ~~~~~DVLVfNTGhWw~~~k~~~~~~yfe~G~~v~~~m~~~~AyrkALrT~arwVd~~id~~kt~VFfRT~SP~HFegG~ 480 (590)
..+..|+|||..|.- +....+. ...+.|+..|+.+++-+.+ . ...+++-+..|. ... .
T Consensus 68 ~~~~~D~vvi~~G~N----------D~~~~~~------~~~~~~~~~l~~li~~~~~---~-~~~~vl~~~~~~-~~~-~ 125 (208)
T d2o14a2 68 YIKPGDYFMLQLGIN----------DTNPKHK------ESEAEFKEVMRDMIRQVKA---K-GADVILSTPQGR-ATD-F 125 (208)
T ss_dssp TCCTTCEEEEECCTG----------GGCGGGC------CCHHHHHHHHHHHHHHHHT---T-TCEEEEECCCCC-TTC-B
T ss_pred hcCCCCEEEEEcCCC----------ccccccc------ccHHHHHHHHHHHHHHHHh---c-CCceeecccccc-ccc-c
Confidence 445679999998864 1111110 2356788888877665543 2 234444333332 110 0
Q ss_pred CCCCCCCCCcccccccccccccCchHHHHHHHHhcccCCceEEeecccccCCCcCCCCccccccccchhhhhccCCCCCc
Q 007771 481 WNSGGQCHKETEPIFNVTYLAKYPSKMRALEYMLPEMKTPVVYLNISRLTDFRKDGHPSIYRMEYKNDQERIAAVNAQDC 560 (590)
Q Consensus 481 Wn~GG~C~~~T~Pl~~~~~~~~~~~~~r~ie~vl~~~k~~V~lLDIT~LS~~R~DgHPs~Y~~~~~~~~~~~~~~~~~DC 560 (590)
.......+ .. .....++++++++ ..+.++|+..++....+.+-. ..........|-
T Consensus 126 -----~~~~~~~~-----~~---~~~~~~~~~~a~~--~~v~~vD~~~~~~~~~~~~~~---------~~~~~~~~~~Dg 181 (208)
T d2o14a2 126 -----TSEGIHSS-----VN---RWYRASILALAEE--EKTYLIDLNVLSSAYFTSIGP---------ERTLGLYMDGDT 181 (208)
T ss_dssp -----CTTSCBCC-----TT---STTHHHHHHHHHH--TTCEEECHHHHHHHHHHHHCH---------HHHHTTBCTTCS
T ss_pred -----ccccchHH-----HH---HHHHHHHHHhhcc--CCcEEeccHHHHHHHHHHhCc---------cccccccCCCCC
Confidence 01100001 11 1223455666654 457789987765321111000 000000112466
Q ss_pred ccccCCCchhHHHHHHHHHHHhcCCCCC
Q 007771 561 SHWCLPGVPDTWNELLYVSLLKTGRESW 588 (590)
Q Consensus 561 lHWCLPGvpDtWNelLya~L~~~~~~~w 588 (590)
+|.=--| -..+-++++..|.+.+..+|
T Consensus 182 vHpn~~G-~~~~A~~i~~~lk~~g~~g~ 208 (208)
T d2o14a2 182 LHPNRAG-ADALARLAVQELKRQGIAGF 208 (208)
T ss_dssp SSBBHHH-HHHHHHHHHHHHHHTTCTTC
T ss_pred CCCCHHH-HHHHHHHHHHHHHhcccCCC
Confidence 6653222 25667788888888877765
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|