Citrus Sinensis ID: 007779
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | 2.2.26 [Sep-21-2011] | |||||||
| O66576 | 340 | Anthranilate phosphoribos | yes | no | 0.559 | 0.970 | 0.254 | 8e-13 | |
| B1YLS1 | 339 | Anthranilate phosphoribos | yes | no | 0.503 | 0.876 | 0.240 | 5e-11 | |
| A6TM73 | 339 | Anthranilate phosphoribos | yes | no | 0.508 | 0.884 | 0.231 | 2e-08 | |
| B2FKL2 | 343 | Anthranilate phosphoribos | yes | no | 0.545 | 0.938 | 0.231 | 3e-08 | |
| A1W2Z7 | 344 | Anthranilate phosphoribos | yes | no | 0.511 | 0.877 | 0.241 | 3e-08 | |
| B9MBS3 | 344 | Anthranilate phosphoribos | yes | no | 0.511 | 0.877 | 0.241 | 3e-08 | |
| A5UMC1 | 335 | Anthranilate phosphoribos | yes | no | 0.545 | 0.961 | 0.248 | 6e-08 | |
| A2SLH5 | 344 | Anthranilate phosphoribos | yes | no | 0.505 | 0.866 | 0.255 | 7e-08 | |
| B0K2U2 | 338 | Anthranilate phosphoribos | yes | no | 0.559 | 0.976 | 0.224 | 1e-07 | |
| B0K8T3 | 338 | Anthranilate phosphoribos | yes | no | 0.559 | 0.976 | 0.224 | 1e-07 |
| >sp|O66576|TRPD_AQUAE Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus (strain VF5) GN=trpD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 170/374 (45%), Gaps = 44/374 (11%)
Query: 219 LREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYC 278
LR++ +L EE+ ++++V + +A +++ + A ++G +M ET E++
Sbjct: 8 LRKIAEFENLTAEEMYNLMKEV----AEGRA---TDAQIGALVMGTKMKGETPEEIEGAV 60
Query: 279 LAFDDELGPPPVADVKSLTHY-GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP 337
F +++ PV D + L G D ++ F ST+ V + G HG +
Sbjct: 61 KLFREKVVRVPVKDPEELVDVVGTGGDKSSTFNVSTV-TGFVLAGAGVKVAKHGNRSVSS 119
Query: 338 KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKR 397
K G + L+ +GA L + L+E E+GF ++ P++ ++ R + R
Sbjct: 120 KSGSAD--FLEALGAKVELLPEKVARLIE--EVGFGFMFAPLFHPAMKRVVSPRREVGVR 175
Query: 398 PPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTT 457
+ + G + + G + + Y + +K GV VV GE G +
Sbjct: 176 ---SIFNLIGPLTNPAGVKRYLLGVFSKEYVDKFAKALKNLGVKKAFVVHGEGGIDEV-- 230
Query: 458 RLRSVNASKGLPVNYCSGFRSLNVESTF--EGDGVSRQSFNLEVNASNYGFEPTNTPRAD 515
SV + G RS TF E GV R+S + EV N+P
Sbjct: 231 ---SVEGETYVTEVSEEGIRSF----TFSPEELGVKRKSLS-EVR--------VNSPE-- 272
Query: 516 RSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKA 575
+++++ L+ LRGE+G D ++LNA +L + A D+ A + A+E+IDSGKA
Sbjct: 273 ----ESVKVALSVLRGEEGTPRDMVLLNASF--GILVSERAGDIKEAFEMAKESIDSGKA 326
Query: 576 LKRLLNYIKISHKL 589
L+ L Y+++S+K+
Sbjct: 327 LEVLEKYVELSNKI 340
|
Aquifex aeolicus (strain VF5) (taxid: 224324) EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 8 |
| >sp|B1YLS1|TRPD_EXIS2 Anthranilate phosphoribosyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 150/370 (40%), Gaps = 73/370 (19%)
Query: 227 HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG 286
HL +EE+Q R++ A V++S ++AFLI + ET EL +
Sbjct: 13 HLRFEEMQQAARELF-------AEDVTDSEIAAFLIALKAKGETAEELAGLASIMREVAV 65
Query: 287 PPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQM 346
PV+ + + G DG+ F ST A V + G HG + K G + +
Sbjct: 66 DIPVSGTDFIDNCGTGGDGSQSFNISTT-AAFVLAGAGAKVAKHGNRSVSSKTGSAD--V 122
Query: 347 LKFMGASTNLSVLQAKELLEDEEIGFAYVSLREAR-------------PSLYSLIGLREH 393
L+ +G ++S + LLE I F + R P++++LIG
Sbjct: 123 LESLGVPLDVSTEEIATLLETNGIAFLFAQRMHPRVKQIMKVRRDLRIPTIFNLIG---P 179
Query: 394 IKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKG----E 449
+ P+ T + G Y E E + + + R G +V+ G +
Sbjct: 180 LTNPVPLKTQ---------------LLGIYREDLLETIALTLHRLGRKRAIVLHGACGMD 224
Query: 450 EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPT 509
E +L+ T +L ++ +G+ + F+L P
Sbjct: 225 EASLAGTNQLVLLD----------------------QGELI---RFSLHPEEVGLSVAPI 259
Query: 510 NTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREA 569
R + ++N E+ L LRGE GP D ++LNAG+ L E + ++R+ E+
Sbjct: 260 EAIRGG-TAAENAEILLRVLRGEAGPYRDTVLLNAGIA--LFAEGRVETIREGIERSAES 316
Query: 570 IDSGKALKRL 579
IDSG+AL++L
Sbjct: 317 IDSGRALEKL 326
|
Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) (taxid: 262543) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|A6TM73|TRPD_ALKMQ Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 46/346 (13%)
Query: 252 VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFR 311
V++S + FL RM ET E+ A + V S+ G D F
Sbjct: 32 VTDSQIGGFLTALRMKGETVEEITASAKVMRSKALVVEVNQPHSIDTCGTGGDQANTFNI 91
Query: 312 STLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIG 371
ST + + + HG + + G + +L+ +G + +L+ Q + +E +G
Sbjct: 92 STAVAFVAAAAG-VTVVKHGNRSVSSQCGSAD--VLEKLGVNIDLTPKQVETCVEQVNMG 148
Query: 372 FAYV-----SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEG 426
F + +++ A + L G+R P+ KV+ V G + E
Sbjct: 149 FMFAPKFHQAMKYAAAARREL-GVRTIFNILGPLTNPAKVK---------GQVLGVFDES 198
Query: 427 YEEPLLMLMKRRGVHSGLVVKGEEG--ALSMTTRLRSVNASKGLPVNYCSGFRSLNVEST 484
E + ++K GV G+VV G +G ++ TT+ + G+ NY R ++ T
Sbjct: 199 LTEVMAQVLKELGVERGMVVHGLDGLDEITTTTKTKVSELKNGMISNYVIDPRQFDIPLT 258
Query: 485 FEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNA 544
+ D A KN + L ++GE G + +++NA
Sbjct: 259 DKED------------------------LAGGDAEKNASIILNIVKGETGGKRNMVLINA 294
Query: 545 GMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
G ++ + A + +DRA E ID G AL +L IK+S +LK
Sbjct: 295 GAAIYV--GNAANSLQEGIDRAAEVIDMGLALDKLNQLIKLSQELK 338
|
Alkaliphilus metalliredigens (strain QYMF) (taxid: 293826) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|B2FKL2|TRPD_STRMK Anthranilate phosphoribosyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 151/384 (39%), Gaps = 62/384 (16%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAY 277
AL + G + ++E+ ++R ++ VS + +A L G R+ +ET E+ A
Sbjct: 8 ALHRTIEHGEIFFDEMVDLMRQIM-------RGDVSPMMTAAILTGLRVKKETVDEIAAA 60
Query: 278 CLAFDDELGPPPVADVKSLTH-YGEPYDGNTRFFRST--LFVAAVRSCYGESCLLHGAEW 334
+ P PVAD +L G DG+ F ST +FVAA HG
Sbjct: 61 ATVMREFARPVPVADTSNLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVAK---HGNRS 117
Query: 335 MPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHI 394
+ K G + L+ +GA L Q ++ IGF + + PS+ + +R +
Sbjct: 118 VSSKSGSADA--LEALGAVIELQPDQVAAAIDRTGIGFMFAPIHH--PSMKVVAPVRREM 173
Query: 395 KKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE---- 450
R + +++ G +H +++ G +VV G +
Sbjct: 174 GVR---TIFNILGPLTNPASAPSVLMGVFHPDLVGIQARVLRELGTERAMVVWGRDNMDE 230
Query: 451 ---GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGF- 506
GA ++ LR DG R+ E++ ++G
Sbjct: 231 ISLGAGTLVGELR---------------------------DGKVRE---YEIHPEDFGIA 260
Query: 507 -EPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDR 565
+ R D ++I++ A L E GP D + LNAG ++ G A D+ + R
Sbjct: 261 MSASRNLRVD-GPEQSIQMLRAVLDNEPGPALDIVALNAGAALYVAGV--ASDIGDGLAR 317
Query: 566 AREAIDSGKALKRLLNYIKISHKL 589
AR AI +G A +RL Y++ + L
Sbjct: 318 ARAAIANGSARQRLQQYVETTRAL 341
|
Stenotrophomonas maltophilia (strain K279a) (taxid: 522373) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|A1W2Z7|TRPD_ACISJ Anthranilate phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 41/343 (11%)
Query: 252 VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTH-YGEPYDGNTRFF 310
+S + +A G R+ +ET E+ A + V D K L G DG F
Sbjct: 36 LSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFN 95
Query: 311 RSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370
ST V + G HG + K G + ++ +G NL Q + + D I
Sbjct: 96 ISTC-ATFVIAAAGAKVSKHGGRSVSSKSGSADA--MEALGVHINLQPAQIAQCIGDVGI 152
Query: 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEP 430
GF + P++ ++ +R+ + R + G I+ G +HE
Sbjct: 153 GFMFAP--NHHPAMKNVAPVRKELGVR---TIFNILGPLTNPAGAPNILMGVFHEDLVGI 207
Query: 431 LLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGV 490
+ ++R G LVV G +G L ++ G V DG
Sbjct: 208 QVRALQRLGAEHALVVYGRDG-------LDEISLGAGTLVGELK-------------DGA 247
Query: 491 SRQSFNLEVNASNYGFEPTNTPRADR----SVSKNIELGLAALRGEKGPTYDRIVLNAGM 546
R+ E++ ++G T RA R + SK + +G+ L+G++GP D + LNAG
Sbjct: 248 VRE---YEIHPEDFGLRMAGT-RALRVENPTESKAMLMGV--LQGDEGPARDIVCLNAGA 301
Query: 547 VDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589
L + A+ + + RA++A+ SG AL +L + + KL
Sbjct: 302 A--LYAANVADSLEDGLRRAQQALASGAALAKLQQLVAYTQKL 342
|
Acidovorax sp. (strain JS42) (taxid: 232721) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|B9MBS3|TRPD_ACIET Anthranilate phosphoribosyltransferase OS=Acidovorax ebreus (strain TPSY) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 41/343 (11%)
Query: 252 VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTH-YGEPYDGNTRFF 310
+S + +A G R+ +ET E+ A + V D K L G DG F
Sbjct: 36 LSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFN 95
Query: 311 RSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370
ST V + G HG + K G + ++ +G NL Q + + D I
Sbjct: 96 ISTC-ATFVIAAAGAKVSKHGGRSVSSKSGSADA--MEALGVHINLQPAQIAQCIGDVGI 152
Query: 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEP 430
GF + P++ ++ +R+ + R + G I+ G +HE
Sbjct: 153 GFMFAP--NHHPAMKNVAPVRKELGVR---TIFNILGPLTNPAGAPNILMGVFHEDLVGI 207
Query: 431 LLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGV 490
+ ++R G LVV G +G L ++ G V DG
Sbjct: 208 QVRALQRLGAEHALVVYGRDG-------LDEISLGAGTLVGELK-------------DGA 247
Query: 491 SRQSFNLEVNASNYGFEPTNTPRADR----SVSKNIELGLAALRGEKGPTYDRIVLNAGM 546
R+ E++ ++G T RA R + SK + +G+ L+G++GP D + LNAG
Sbjct: 248 VRE---YEIHPEDFGLRMAGT-RALRVENPTESKAMLMGV--LQGDEGPARDIVCLNAGA 301
Query: 547 VDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589
L + A+ + + RA++A+ SG AL +L + + KL
Sbjct: 302 A--LYAANVADSLEDGLRRAQQALASGAALAKLQQLVAYTQKL 342
|
Acidovorax ebreus (strain TPSY) (taxid: 535289) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|A5UMC1|TRPD_METS3 Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 155/378 (41%), Gaps = 56/378 (14%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRE---- 273
A+ +V+ G L +E G + +++ + SE +SA+L M ET E
Sbjct: 5 AILKVVNGNDLNAKEAYGAMDEIMSGES-------SEVQMSAYLTALSMKGETIEEITAS 57
Query: 274 ---LKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLH 330
++A+C+ + D + L G DG+ F ST + V S G H
Sbjct: 58 TKAMRAHCVKL--------LNDEEVLEIVGTGGDGSNTFNISTTS-SIVISAAGVPVAKH 108
Query: 331 GAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGL 390
G K G + +L+ +G N+ + K L +EI ++ + ++ + G+
Sbjct: 109 GNRSASSKCGAAD--VLEALG--VNIYIEPEKSLKILKEINLCFLFAQNYHLAMKFVAGV 164
Query: 391 REHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450
R+ + R + G V G Y E +PL ++K GV S L V G++
Sbjct: 165 RKELSIRTIFNI---LGPLTNPAGATMQVLGVYDESLVKPLCEVLKNVGVKSALSVYGQD 221
Query: 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTN 510
G L ++ S V R E E G+ R S V +
Sbjct: 222 G-------LDEISVSDKTSVCELRDGRLKCYEIAPEDFGMERCSKEDLVGGN-------- 266
Query: 511 TPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLG-CDGAEDVSVAMDRAREA 569
PR +N E+ L+ L G+KGP + +VLN+ ++ G D ED + A E
Sbjct: 267 -PR------ENAEITLSILNGQKGPKRNAVVLNSAAALYVAGKADSIED---GVRLASEI 316
Query: 570 IDSGKALKRLLNYIKISH 587
IDSG+A K+L +I+ ++
Sbjct: 317 IDSGRAKKQLEKFIEYTN 334
|
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) (taxid: 420247) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|A2SLH5|TRPD_METPP Anthranilate phosphoribosyltransferase OS=Methylibium petroleiphilum (strain PM1) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 51/349 (14%)
Query: 252 VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHY-GEPYDGNTRFF 310
+S +++A +G R+ +E+ E+ A + P PVAD + L G D F
Sbjct: 34 MSPVMIAALAVGLRVKKESIGEIAAAATVMREFATPVPVADTEHLVDLCGTGGDAAHTFN 93
Query: 311 RST--LFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDE 368
ST +FVAA HG + G + +L+ +GAS +L+ Q E L +
Sbjct: 94 ISTTAMFVAAAAGARVAK---HGGRSVSSTSGSAD--VLEALGASIDLAPAQVAECLAES 148
Query: 369 EIGFAYV-----SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFY 423
IGF + +++ A P L G+R P+ G + G +
Sbjct: 149 GIGFMFAPNHHPAMKHAGPVRKEL-GVRTIFNILGPLTNP---------AGAPNQLMGVF 198
Query: 424 HEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVES 483
H + +++R G LVV G G + SL+ E
Sbjct: 199 HPDLVGIQVRVLQRLGSRHVLVVYGMNGMDEI----------------------SLSGE- 235
Query: 484 TFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLA--ALRGEKGPTYDRIV 541
T G+ + V+ S++G P R + SK+ +G AL E GP D ++
Sbjct: 236 TLIGELKDGEVREYTVHPSDFGL-PVYDTRGLKVASKDESVGCIRRALADEAGPVRDIVL 294
Query: 542 LNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
LNAG L D A + + +AREA+ SG A K L ++ + +LK
Sbjct: 295 LNAGAA--LYAADVAPSIGEGVRQAREAVASGAAAKTLERFVATTRRLK 341
|
Methylibium petroleiphilum (strain PM1) (taxid: 420662) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|B0K2U2|TRPD_THEPX Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 152/375 (40%), Gaps = 45/375 (12%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAY 277
A++++++ +L E V+ +++ N P SL+ LIG R+ E+ E+ +
Sbjct: 5 AIKKIVSKENLEEREAYAVMNEIMS---GNATP----SLIGGILIGLRLKGESVEEITGF 57
Query: 278 CLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP 337
A D +A + G DG F ST VA + S G HG +
Sbjct: 58 AKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTA-VAIIASAAGVKVAKHGNRAVSS 116
Query: 338 KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKR 397
K G + +L +G + + K L+E++ +GF + + ++ ++ G+R+ + R
Sbjct: 117 KSGSAD--VLMELGFDIEMVPEKTKRLIEEKGMGFLFAP--KYHVAMKNVAGIRKELGTR 172
Query: 398 PPVATSEKVQQ--FVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSM 455
+ FV+ Q V G Y + PL ++ R G +VV G +G +
Sbjct: 173 TVFNVLGPLTNPAFVKGQ-----VLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEI 227
Query: 456 TTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD 515
TT TF + + + ++ +YG +
Sbjct: 228 TT-----------------------TSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLE 264
Query: 516 -RSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGK 574
+ +N ++ L L+GEKGP D +VLNA ++ ED+ + A ID+G
Sbjct: 265 GKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKV--VEDLKEGIKVANYLIDTGL 322
Query: 575 ALKRLLNYIKISHKL 589
AL +L ++ +L
Sbjct: 323 ALDKLTEILEYQRRL 337
|
Thermoanaerobacter sp. (strain X514) (taxid: 399726) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
| >sp|B0K8T3|TRPD_THEP3 Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 152/375 (40%), Gaps = 45/375 (12%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAY 277
A++++++ +L E V+ +++ N P SL+ LIG R+ E+ E+ +
Sbjct: 5 AIKKIVSKENLEEREAYAVMNEIMS---GNATP----SLIGGILIGLRLKGESVEEITGF 57
Query: 278 CLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP 337
A D +A + G DG F ST VA + S G HG +
Sbjct: 58 AKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTA-VAIIASAAGVKVAKHGNRAVSS 116
Query: 338 KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKR 397
K G + +L +G + + K L+E++ +GF + + ++ ++ G+R+ + R
Sbjct: 117 KSGSAD--VLMELGFDIEMVPEKTKRLIEEKGMGFLFAP--KYHVAMKNVAGIRKELGTR 172
Query: 398 PPVATSEKVQQ--FVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSM 455
+ FV+ Q V G Y + PL ++ R G +VV G +G +
Sbjct: 173 TVFNVLGPLTNPAFVKGQ-----VLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEI 227
Query: 456 TTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD 515
TT TF + + + ++ +YG +
Sbjct: 228 TT-----------------------TSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLE 264
Query: 516 -RSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGK 574
+ +N ++ L L+GEKGP D +VLNA ++ ED+ + A ID+G
Sbjct: 265 GKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKV--VEDLKEGIKVANYLIDTGL 322
Query: 575 ALKRLLNYIKISHKL 589
AL +L ++ +L
Sbjct: 323 ALDKLTEILEYQRRL 337
|
Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099) EC: 2 EC: . EC: 4 EC: . EC: 2 EC: . EC: 1 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| 255573995 | 589 | anthranilate phosphoribosyltransferase, | 0.991 | 0.993 | 0.814 | 0.0 | |
| 225470591 | 593 | PREDICTED: anthranilate phosphoribosyltr | 1.0 | 0.994 | 0.797 | 0.0 | |
| 297838857 | 596 | hypothetical protein ARALYDRAFT_894871 [ | 1.0 | 0.989 | 0.766 | 0.0 | |
| 449434965 | 591 | PREDICTED: anthranilate phosphoribosyltr | 0.998 | 0.996 | 0.770 | 0.0 | |
| 224110902 | 601 | predicted protein [Populus trichocarpa] | 0.989 | 0.971 | 0.757 | 0.0 | |
| 18409618 | 595 | putative anthranilate phosphoribosyltran | 1.0 | 0.991 | 0.773 | 0.0 | |
| 334183810 | 632 | putative anthranilate phosphoribosyltran | 1.0 | 0.933 | 0.727 | 0.0 | |
| 356526769 | 582 | PREDICTED: anthranilate phosphoribosyltr | 0.983 | 0.996 | 0.750 | 0.0 | |
| 12324765 | 552 | hypothetical protein; 95675-92527 [Arabi | 0.896 | 0.958 | 0.788 | 0.0 | |
| 125537955 | 588 | hypothetical protein OsI_05725 [Oryza sa | 0.872 | 0.875 | 0.758 | 0.0 |
| >gi|255573995|ref|XP_002527915.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] gi|223532690|gb|EEF34472.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/594 (81%), Positives = 532/594 (89%), Gaps = 9/594 (1%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRR-IRLTVKAD-LD 58
M L+NPEP FS+ SIRI LTH RL +S STD R IGRR + L VKA LD
Sbjct: 1 MKALINPEP-FSI--SIRIASPSNLTHSRLHSSCLRFSTD--RCIGRRNLCLIVKAAALD 55
Query: 59 SALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKV 118
SA++DQLG+ ESDI NPA+SSSYR+SKLPKPNQT+L+AQA+VCTGPTQTRPL ED+AFKV
Sbjct: 56 SAILDQLGIPESDIKNPAVSSSYRNSKLPKPNQTVLDAQARVCTGPTQTRPLNEDQAFKV 115
Query: 119 LDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMR 178
LDTILRSA+G+LKDEE+VSKAQLGAFF+AMTIRANAFPE TQWSEGE+RAMN FWPLL+R
Sbjct: 116 LDTILRSARGELKDEEKVSKAQLGAFFAAMTIRANAFPEETQWSEGEKRAMNNFWPLLVR 175
Query: 179 ALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLR 238
ALPPD+IFIADPEGSIM G SIGP Y GN EMRLVGALRE+LAGGHLGYEEVQGVLR
Sbjct: 176 ALPPDLIFIADPEGSIMSIGSSIGPQYVGNCTSEMRLVGALREILAGGHLGYEEVQGVLR 235
Query: 239 DVLPLQV-DNKAPG-VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL 296
+VLPL V DN+ G VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG PPVADV+SL
Sbjct: 236 EVLPLNVGDNECSGGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGSPPVADVRSL 295
Query: 297 THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNL 356
THYGEPYDGNTRFFRSTLFVAAVRSCYGES LLHG +WMPPKGG+TEEQMLK+MGA+T+L
Sbjct: 296 THYGEPYDGNTRFFRSTLFVAAVRSCYGESSLLHGVDWMPPKGGITEEQMLKYMGANTSL 355
Query: 357 SVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGRE 416
+ LQAKELLEDEE+GFAY+S REA P LYSL GLREHIKKRPP+AT+EKVQQFVRAQG+E
Sbjct: 356 TPLQAKELLEDEEVGFAYISQREACPPLYSLTGLREHIKKRPPLATTEKVQQFVRAQGKE 415
Query: 417 AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGF 476
AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRS NASKGLPVNYCSGF
Sbjct: 416 AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSANASKGLPVNYCSGF 475
Query: 477 RSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPT 536
RSL+ S FE DGVSR+SF++EVNA +YGFEPT+TPR DRSVSKNIELGLAAL G+KGP
Sbjct: 476 RSLSRASAFEVDGVSRESFSMEVNAKDYGFEPTDTPRTDRSVSKNIELGLAALHGQKGPA 535
Query: 537 YDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
YDRIVLNAGMVDHLLGCDG ED+ A+DRAREAIDSG+ALKRLLNYIKISH+++
Sbjct: 536 YDRIVLNAGMVDHLLGCDGGEDIPTALDRAREAIDSGRALKRLLNYIKISHRVR 589
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470591|ref|XP_002274188.1| PREDICTED: anthranilate phosphoribosyltransferase [Vitis vinifera] gi|296083417|emb|CBI23370.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/593 (79%), Positives = 529/593 (89%), Gaps = 3/593 (0%)
Query: 1 MNTLLNPEP-SFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLI-GRRIRLTVKADLD 58
M LL+PEP S S + R TK + H ++Q S +FS+ +GN I R + L VK+ LD
Sbjct: 1 MRALLSPEPPSISYLTPTRTTKRRSIFHWKIQTSLRFSAGNGNCSIRPRSMCLNVKSALD 60
Query: 59 SALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKV 118
SA IDQLGL ES+I NP++S SYRS KLPKPNQT+L+AQA+VCTGPTQT+PL E++A KV
Sbjct: 61 SATIDQLGLPESEIRNPSVSPSYRSWKLPKPNQTVLDAQARVCTGPTQTKPLGEEQALKV 120
Query: 119 LDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMR 178
LDTILRSAKG+LKD+EEVSKAQLGAFF+ MTIRANAFPEATQWS+GERRAMN FWPLL+R
Sbjct: 121 LDTILRSAKGELKDQEEVSKAQLGAFFAGMTIRANAFPEATQWSDGERRAMNKFWPLLVR 180
Query: 179 ALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLR 238
LPPDV+FIADPEGSIMG GGS GPHY GN P EMRLVGALREVLAGGHLGYEEVQGVLR
Sbjct: 181 VLPPDVLFIADPEGSIMGIGGSAGPHYVGNGPSEMRLVGALREVLAGGHLGYEEVQGVLR 240
Query: 239 DVLPLQV-DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLT 297
DVLPL++ D K+ GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG PVADV+SLT
Sbjct: 241 DVLPLKLEDKKSAGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGSQPVADVRSLT 300
Query: 298 HYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLS 357
HYGEPYDGNTR+FRSTLFVAAVRSCY ESCLLHG EWMPPKGG+TEEQMLKFMGA+T LS
Sbjct: 301 HYGEPYDGNTRYFRSTLFVAAVRSCYSESCLLHGVEWMPPKGGITEEQMLKFMGANTQLS 360
Query: 358 VLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREA 417
LQAK+LLED+E+GFAY+S REA+PSL+S+IGLREHIKKRPP+ATSEKVQQ VRAQGREA
Sbjct: 361 PLQAKKLLEDDEVGFAYLSQREAQPSLHSIIGLREHIKKRPPLATSEKVQQLVRAQGREA 420
Query: 418 IVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFR 477
I+AGF+HEGYEEPLLMLM+RRGVHSGLVVKGEEGALSMTT+LRSVNASKGLPVNYCSGFR
Sbjct: 421 IIAGFFHEGYEEPLLMLMRRRGVHSGLVVKGEEGALSMTTKLRSVNASKGLPVNYCSGFR 480
Query: 478 SLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTY 537
SL+ S E DGVSR++FN+ +NA +YGFEPT+TPR DRSVS+NIELGLAALRGEKGP Y
Sbjct: 481 SLSATSALELDGVSRENFNIVINAKDYGFEPTDTPRTDRSVSRNIELGLAALRGEKGPAY 540
Query: 538 DRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
DRIVLNAG+ DHLLGCDGAED+ A+DRAREAIDSGKAL RLLNYIKISHK+K
Sbjct: 541 DRIVLNAGIADHLLGCDGAEDIFSALDRAREAIDSGKALDRLLNYIKISHKMK 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297838857|ref|XP_002887310.1| hypothetical protein ARALYDRAFT_894871 [Arabidopsis lyrata subsp. lyrata] gi|297333151|gb|EFH63569.1| hypothetical protein ARALYDRAFT_894871 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/596 (76%), Positives = 525/596 (88%), Gaps = 6/596 (1%)
Query: 1 MNTLLNPEPSFSL--IPSIRITKTHYLTHRRLQASRQFSSTD-GNRLIGRRIR--LTVKA 55
M +LNPE F L I S +I ++ + + +F+ TD G R + R++ L++KA
Sbjct: 1 MKAILNPESFFCLSSISSSQIKRSLHFNGLSSSSCLRFALTDCGGRTLQRKLTGGLSIKA 60
Query: 56 DLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA 115
LDSA+++QLGLKESD+ NPA+SS+YR S++PKPN T+L+AQA+VCTGPTQTRPL E++A
Sbjct: 61 VLDSAMMEQLGLKESDVKNPALSSTYRGSEIPKPNLTVLDAQARVCTGPTQTRPLSEEQA 120
Query: 116 FKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPL 175
FKV DTILRSA+G+LKDEE VSKAQLGAFF+ MTIRANAFPE TQWSEGE+RAM+ FWPL
Sbjct: 121 FKVFDTILRSARGELKDEEPVSKAQLGAFFAGMTIRANAFPEETQWSEGEKRAMDVFWPL 180
Query: 176 LMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQG 235
L+RALPPDV+FIADPEGS++G G S+GP + GN+ REMRLVGALRE+LAGGHLGYEEV+G
Sbjct: 181 LVRALPPDVLFIADPEGSLLGTGNSVGPTFVGNETREMRLVGALREILAGGHLGYEEVKG 240
Query: 236 VLRDVLPLQVDNKAP-GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVK 294
VLRDVLPL ++ GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE G PP+ADVK
Sbjct: 241 VLRDVLPLAMEGSLNLGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEHGAPPIADVK 300
Query: 295 SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGAST 354
SLTHYGEPYDGNTRFFRSTLFVA VRSCYGES LLHG EWMPPKGGVTEEQMLKFMGA+T
Sbjct: 301 SLTHYGEPYDGNTRFFRSTLFVATVRSCYGESSLLHGVEWMPPKGGVTEEQMLKFMGANT 360
Query: 355 NLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQG 414
+LSV QAKEL+EDE+ GFAY+SLREARPSLYSLIG+REHIKKRPP+AT+EKVQQFVRA G
Sbjct: 361 HLSVQQAKELIEDEKAGFAYLSLREARPSLYSLIGMREHIKKRPPLATTEKVQQFVRATG 420
Query: 415 REAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCS 474
+EAIVAGFYHEGYEEPLLMLM+RRGVHSGLVVKGEEGALSMTTR+R+ +ASKG PVNYCS
Sbjct: 421 KEAIVAGFYHEGYEEPLLMLMRRRGVHSGLVVKGEEGALSMTTRVRAASASKGFPVNYCS 480
Query: 475 GFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKG 534
GFRSL+ ++ E DGVSRQSFNLEV+A YGFEPT TPR DRSVSKNIELGLAALRGEKG
Sbjct: 481 GFRSLSSDTALEADGVSRQSFNLEVDAREYGFEPTETPRTDRSVSKNIELGLAALRGEKG 540
Query: 535 PTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
YDRIVLNAG+VDHLLG +GAEDV+VAM+RA+EAIDSGKALK+LLNYI+IS K+K
Sbjct: 541 AAYDRIVLNAGIVDHLLGGEGAEDVAVAMERAKEAIDSGKALKKLLNYIEISRKMK 596
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434965|ref|XP_004135266.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Cucumis sativus] gi|449478600|ref|XP_004155365.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/592 (77%), Positives = 512/592 (86%), Gaps = 3/592 (0%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLI-GRRIRLTVKADLDS 59
M L + E SF R L +++ F D R I G+RI LT KA+LD
Sbjct: 1 MKALFHSESSFLHPHHSRCQNNRDLLRFQVRTPLIFPVKDRGRWIRGKRICLTAKAELDW 60
Query: 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVL 119
A +DQLGL ESD+ +PAIS+SYRS LPKPNQT+LEAQA+VCTGPTQTRPL E++AFKVL
Sbjct: 61 ATMDQLGLSESDVQSPAISTSYRSLNLPKPNQTVLEAQARVCTGPTQTRPLSEEQAFKVL 120
Query: 120 DTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRA 179
DTILRS KG+LKDEEEVS++QLGAFFSAMTIRAN FPEATQWSEGE++AM TFWPLL+R
Sbjct: 121 DTILRSVKGELKDEEEVSQSQLGAFFSAMTIRANVFPEATQWSEGEKKAMTTFWPLLIRV 180
Query: 180 LPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRD 239
LPPDVIF+ADPEGSIMGG SIGP + G EMRLVGALRE+LAGGHLGYEEVQGV+RD
Sbjct: 181 LPPDVIFLADPEGSIMGGS-SIGPQFVGKGSCEMRLVGALREILAGGHLGYEEVQGVMRD 239
Query: 240 VLPLQVDNKAP-GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTH 298
VLPL+ ++ P GVS SLLSAFLIGQRMNRETDRELKA+CL FDDE GP PVADV+SLTH
Sbjct: 240 VLPLKTESLMPSGVSHSLLSAFLIGQRMNRETDRELKAHCLVFDDESGPTPVADVRSLTH 299
Query: 299 YGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSV 358
YGEPYDGNTR+FRSTLFVAAVRSCYGESCLLHG +WMPPKGG+TEEQMLKFMGA+TN+
Sbjct: 300 YGEPYDGNTRYFRSTLFVAAVRSCYGESCLLHGVDWMPPKGGITEEQMLKFMGANTNVFP 359
Query: 359 LQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAI 418
AK LLEDEE+GFAYVS REARPSLYSL+GLREHIKKRPP+AT+EKVQQFV+A+G+EAI
Sbjct: 360 SHAKRLLEDEEVGFAYVSQREARPSLYSLVGLREHIKKRPPLATTEKVQQFVKARGKEAI 419
Query: 419 VAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRS 478
V GFYH GYEEPLLMLM+RRGVHSGLVVKGEEGALSMTT+LRS NASKGLPVNYCSGF+S
Sbjct: 420 VTGFYHHGYEEPLLMLMRRRGVHSGLVVKGEEGALSMTTKLRSANASKGLPVNYCSGFQS 479
Query: 479 LNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYD 538
L+++S FE DGVSR SF+LEVNA++YGF+PT+TPR DRSVSKNIELGLAAL GEKG YD
Sbjct: 480 LSMQSAFEVDGVSRHSFSLEVNAADYGFQPTDTPRTDRSVSKNIELGLAALNGEKGAAYD 539
Query: 539 RIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
RIVLNAGMVDHLLGC GAEDVSVA++RARE IDSG+ALKRLLNYIKIS+K K
Sbjct: 540 RIVLNAGMVDHLLGCSGAEDVSVALERAREVIDSGEALKRLLNYIKISNKFK 591
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224110902|ref|XP_002315676.1| predicted protein [Populus trichocarpa] gi|222864716|gb|EEF01847.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/607 (75%), Positives = 518/607 (85%), Gaps = 23/607 (3%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRR-IRLTVKADLDS 59
M +LL+P+PS +P+ L+ ++ +S +F D +R IGR+ LT+ A LD
Sbjct: 1 MKSLLSPQPS---LPTHITEPRTNLSRSKVTSSLRF---DRDRWIGRKKCGLTLSAVLDP 54
Query: 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVL 119
A IDQ G+ ES+ +NPA+S+SYRSSKLPKPNQT+L+AQA+VCTGPTQT+PL ED+AFKV
Sbjct: 55 ATIDQFGISESEFVNPAVSTSYRSSKLPKPNQTVLDAQARVCTGPTQTKPLNEDQAFKVF 114
Query: 120 DTILRSA--------------KGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGE 165
DTILRS +G+LKDEE+VSKAQLGAFF+AMTIRANAFPEATQWSEGE
Sbjct: 115 DTILRSGELIIFSSLSLPLFFRGELKDEEQVSKAQLGAFFAAMTIRANAFPEATQWSEGE 174
Query: 166 RRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAG 225
+ A++ FWP L+RALP DVIFIADPEGSIMG G SIGP Y GN +MRLVGALREVLAG
Sbjct: 175 KHAVSNFWPHLVRALPSDVIFIADPEGSIMGAGSSIGPQYVGNGTSDMRLVGALREVLAG 234
Query: 226 GHLGYEEVQGVLRDVLPLQV-DNK-APGVSESLLSAFLIGQRMNRETDRELKAYCLAFDD 283
GHLGYEEVQGVLRDVLP DNK + GVSE+LLSAFLIGQRMNRETDRELKAYCLAFDD
Sbjct: 235 GHLGYEEVQGVLRDVLPFTFEDNKCSSGVSETLLSAFLIGQRMNRETDRELKAYCLAFDD 294
Query: 284 ELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTE 343
+LG PVADV+SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGES LLHG EWMPPKGG+TE
Sbjct: 295 QLGLAPVADVRSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESSLLHGVEWMPPKGGITE 354
Query: 344 EQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATS 403
EQMLKFMGA+T L+ LQAKELLEDEE+GFAY+S REA PSLYSLIGLREHIKKRPP+AT+
Sbjct: 355 EQMLKFMGANTRLTPLQAKELLEDEELGFAYISQREACPSLYSLIGLREHIKKRPPLATT 414
Query: 404 EKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVN 463
EKVQQFV+A+GREAIV GFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTT+ RS N
Sbjct: 415 EKVQQFVKARGREAIVTGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTKFRSAN 474
Query: 464 ASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIE 523
ASKGLPVNYCSGFRSL ++S FE DGVSRQ+F EVNA ++GFEPT+TPR DRSVSKNIE
Sbjct: 475 ASKGLPVNYCSGFRSLGMDSAFELDGVSRQNFKTEVNAKDFGFEPTDTPRTDRSVSKNIE 534
Query: 524 LGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYI 583
LGL AL G+KGP YDRIVLNAGMVDHLLGCDGAEDV A+DRAREAIDSGKALK+LLNYI
Sbjct: 535 LGLGALHGQKGPAYDRIVLNAGMVDHLLGCDGAEDVCTALDRAREAIDSGKALKKLLNYI 594
Query: 584 KISHKLK 590
K+S K++
Sbjct: 595 KVSQKMR 601
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18409618|ref|NP_564991.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|13430748|gb|AAK25996.1|AF360286_1 unknown protein [Arabidopsis thaliana] gi|15293217|gb|AAK93719.1| unknown protein [Arabidopsis thaliana] gi|332196959|gb|AEE35080.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/595 (77%), Positives = 519/595 (87%), Gaps = 5/595 (0%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQAS-RQFSSTD-GNRLIGRRIR--LTVKAD 56
M LLNPE SF L L L +S +F TD RL R++ L +KA
Sbjct: 1 MKALLNPESSFCLSSISSSQIKRSLHFNGLSSSCLRFPLTDFAGRLRRRKLTGGLCIKAV 60
Query: 57 LDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAF 116
LDSA+++QLGLKESD+ NPA+SS+YR S++PKPN T+L+AQA+VCTGPTQTRPL E++AF
Sbjct: 61 LDSAMMEQLGLKESDVKNPALSSTYRGSEIPKPNLTVLDAQARVCTGPTQTRPLSEEQAF 120
Query: 117 KVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLL 176
KV DTILRSA+G+LKDEE VSKAQLGAFF+ MTIRANAFPE TQWSEGE+RAM+ FWPLL
Sbjct: 121 KVFDTILRSARGELKDEEPVSKAQLGAFFAGMTIRANAFPEETQWSEGEKRAMDVFWPLL 180
Query: 177 MRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGV 236
+RALPPDV+FIADPEGS++G G S+GP + GN+ REMRLVGALRE+LAGGHLGYEEV+GV
Sbjct: 181 VRALPPDVLFIADPEGSLLGTGNSVGPTFVGNETREMRLVGALREILAGGHLGYEEVKGV 240
Query: 237 LRDVLPLQVDNKA-PGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKS 295
LRDVLPL+ + GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE G PPVADVKS
Sbjct: 241 LRDVLPLETEGSLNSGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEHGAPPVADVKS 300
Query: 296 LTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTN 355
LTHYGEPYDGNTRFFRSTLFVAAVRSC GES LLHG EWMPPKGGVTEEQMLKFMGA+T+
Sbjct: 301 LTHYGEPYDGNTRFFRSTLFVAAVRSCCGESSLLHGVEWMPPKGGVTEEQMLKFMGANTH 360
Query: 356 LSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGR 415
LSV QAKEL+EDE+ GFAY+SLREARPSLYSLI +REHIKKRPP+AT+EKVQQFVRA G+
Sbjct: 361 LSVQQAKELIEDEKAGFAYLSLREARPSLYSLIEMREHIKKRPPLATTEKVQQFVRATGK 420
Query: 416 EAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSG 475
EAIVAGFYHEGYEEPLLMLM+RRGVHSGLVVKGEEGALSMTTR+R+ +ASKG PVNYCSG
Sbjct: 421 EAIVAGFYHEGYEEPLLMLMRRRGVHSGLVVKGEEGALSMTTRVRAASASKGFPVNYCSG 480
Query: 476 FRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGP 535
FRSL+ ++ E DGVSRQSFNLEV+A NYGFEPT TPR DRSVSKNIELGLAALRGEKG
Sbjct: 481 FRSLSSDTALEADGVSRQSFNLEVDARNYGFEPTETPRTDRSVSKNIELGLAALRGEKGA 540
Query: 536 TYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
YDRIVLNAG+VDHLLG +GAEDV+VAM+RA+EAIDSGKALK+LLNYI+IS K+K
Sbjct: 541 AYDRIVLNAGIVDHLLGSEGAEDVAVAMERAKEAIDSGKALKKLLNYIEISRKIK 595
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334183810|ref|NP_001185362.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|332196960|gb|AEE35081.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/632 (72%), Positives = 519/632 (82%), Gaps = 42/632 (6%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQAS-RQFSSTD-GNRLIGRRIR--LTVKAD 56
M LLNPE SF L L L +S +F TD RL R++ L +KA
Sbjct: 1 MKALLNPESSFCLSSISSSQIKRSLHFNGLSSSCLRFPLTDFAGRLRRRKLTGGLCIKAV 60
Query: 57 LDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAF 116
LDSA+++QLGLKESD+ NPA+SS+YR S++PKPN T+L+AQA+VCTGPTQTRPL E++AF
Sbjct: 61 LDSAMMEQLGLKESDVKNPALSSTYRGSEIPKPNLTVLDAQARVCTGPTQTRPLSEEQAF 120
Query: 117 KVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLL 176
KV DTILRSA+G+LKDEE VSKAQLGAFF+ MTIRANAFPE TQWSEGE+RAM+ FWPLL
Sbjct: 121 KVFDTILRSARGELKDEEPVSKAQLGAFFAGMTIRANAFPEETQWSEGEKRAMDVFWPLL 180
Query: 177 MRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGV 236
+RALPPDV+FIADPEGS++G G S+GP + GN+ REMRLVGALRE+LAGGHLGYEEV+GV
Sbjct: 181 VRALPPDVLFIADPEGSLLGTGNSVGPTFVGNETREMRLVGALREILAGGHLGYEEVKGV 240
Query: 237 LRDVLPLQVDNKA-PGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKS 295
LRDVLPL+ + GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE G PPVADVKS
Sbjct: 241 LRDVLPLETEGSLNSGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEHGAPPVADVKS 300
Query: 296 LTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTN 355
LTHYGEPYDGNTRFFRSTLFVAAVRSC GES LLHG EWMPPKGGVTEEQMLKFMGA+T+
Sbjct: 301 LTHYGEPYDGNTRFFRSTLFVAAVRSCCGESSLLHGVEWMPPKGGVTEEQMLKFMGANTH 360
Query: 356 LSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGR 415
LSV QAKEL+EDE+ GFAY+SLREARPSLYSLI +REHIKKRPP+AT+EKVQQFVRA G+
Sbjct: 361 LSVQQAKELIEDEKAGFAYLSLREARPSLYSLIEMREHIKKRPPLATTEKVQQFVRATGK 420
Query: 416 EAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVK---------------------------- 447
EAIVAGFYHEGYEEPLLMLM+RRGVHSGLVVK
Sbjct: 421 EAIVAGFYHEGYEEPLLMLMRRRGVHSGLVVKVESLSFTIKYILMPYELLHTWDVDLEPE 480
Query: 448 ---------GEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLE 498
GEEGALSMTTR+R+ +ASKG PVNYCSGFRSL+ ++ E DGVSRQSFNLE
Sbjct: 481 FCWKLFPYEGEEGALSMTTRVRAASASKGFPVNYCSGFRSLSSDTALEADGVSRQSFNLE 540
Query: 499 VNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAED 558
V+A NYGFEPT TPR DRSVSKNIELGLAALRGEKG YDRIVLNAG+VDHLLG +GAED
Sbjct: 541 VDARNYGFEPTETPRTDRSVSKNIELGLAALRGEKGAAYDRIVLNAGIVDHLLGSEGAED 600
Query: 559 VSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
V+VAM+RA+EAIDSGKALK+LLNYI+IS K+K
Sbjct: 601 VAVAMERAKEAIDSGKALKKLLNYIEISRKIK 632
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526769|ref|XP_003531989.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/590 (75%), Positives = 500/590 (84%), Gaps = 10/590 (1%)
Query: 1 MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADLDSA 60
M L+N F P+ + H R RQ+ IG R+ L +A LD A
Sbjct: 1 MKVLINNPKPFLSSPNSIFPNNNPRFHLRPFPKRQW--------IGPRLCLA-RAALDWA 51
Query: 61 LIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLD 120
I+Q GL E D+ NPA+SSSYR S+LP+PNQT+LEAQA+VCTGPTQTRPL E +AFKV D
Sbjct: 52 TIEQFGLPEFDVRNPALSSSYRRSELPRPNQTVLEAQARVCTGPTQTRPLDEQQAFKVFD 111
Query: 121 TILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL 180
ILRSA+G +KDE+EVSKAQLGAFF+ MTIRANAFPEATQWSEGE RAM TFWPLL+R L
Sbjct: 112 LILRSARGGMKDEDEVSKAQLGAFFAGMTIRANAFPEATQWSEGETRAMKTFWPLLVRVL 171
Query: 181 PPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDV 240
PP+VIFIADPEG +MG G SIGP Y GN EMRLVGALREVLAGGHLG+EEVQGVL+DV
Sbjct: 172 PPEVIFIADPEGLMMGVGSSIGPQYVGNGTSEMRLVGALREVLAGGHLGFEEVQGVLKDV 231
Query: 241 LPLQV-DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHY 299
LP++ D K GVSE+LLSAFLIGQRMNRETDRELKAYCLAFDDE+GPPPVADV+SLTHY
Sbjct: 232 LPIKEGDEKPQGVSEALLSAFLIGQRMNRETDRELKAYCLAFDDEIGPPPVADVRSLTHY 291
Query: 300 GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVL 359
GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHG +WM PKGGVTEEQMLKFMGA+ N+S
Sbjct: 292 GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGVDWMAPKGGVTEEQMLKFMGANINISPS 351
Query: 360 QAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIV 419
+AK+LLED+E+GFAYVS REARPSLYSLI +REHIKKRPP+AT+EKVQQ+V+A G+EAIV
Sbjct: 352 KAKKLLEDDEVGFAYVSQREARPSLYSLIKIREHIKKRPPLATTEKVQQYVKANGKEAIV 411
Query: 420 AGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSL 479
AGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG LS+TTRLRS N ++GLPVNYCSGFR+L
Sbjct: 412 AGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGGLSLTTRLRSANTTRGLPVNYCSGFRAL 471
Query: 480 NVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDR 539
++ ST E GV+R F+LEVNA +YGF+PT+TPR DRSVSKNIELGLAAL GEKGP YDR
Sbjct: 472 DISSTSEVGGVARHGFSLEVNAKDYGFQPTDTPRTDRSVSKNIELGLAALYGEKGPAYDR 531
Query: 540 IVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589
IVLNAG+VDHLLG GAED+S A+DRAREAIDSG ALKRLLNYIK+SHK+
Sbjct: 532 IVLNAGVVDHLLGVGGAEDISAALDRAREAIDSGNALKRLLNYIKVSHKI 581
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|12324765|gb|AAG52347.1|AC011663_26 hypothetical protein; 95675-92527 [Arabidopsis thaliana] gi|12325051|gb|AAG52478.1|AC010796_17 hypothetical protein; 58827-61975 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/552 (78%), Positives = 488/552 (88%), Gaps = 23/552 (4%)
Query: 62 IDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDT 121
++QLGLKESD+ NPA+SS+YR S++PKPN T+L+AQA+VCTGPTQTRPL E++AFKV DT
Sbjct: 1 MEQLGLKESDVKNPALSSTYRGSEIPKPNLTVLDAQARVCTGPTQTRPLSEEQAFKVFDT 60
Query: 122 ILRSA----------------------KGDLKDEEEVSKAQLGAFFSAMTIRANAFPEAT 159
ILRSA +G+LKDEE VSKAQLGAFF+ MTIRANAFPE T
Sbjct: 61 ILRSATLFIDRFDRVLSLISQSHWDAARGELKDEEPVSKAQLGAFFAGMTIRANAFPEET 120
Query: 160 QWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGAL 219
QWSEGE+RAM+ FWPLL+RALPPDV+FIADPEGS++G G S+GP + GN+ REMRLVGAL
Sbjct: 121 QWSEGEKRAMDVFWPLLVRALPPDVLFIADPEGSLLGTGNSVGPTFVGNETREMRLVGAL 180
Query: 220 REVLAGGHLGYEEVQGVLRDVLPLQVDNKA-PGVSESLLSAFLIGQRMNRETDRELKAYC 278
RE+LAGGHLGYEEV+GVLRDVLPL+ + GVSESLLSAFLIGQRMNRETDRELKAYC
Sbjct: 181 REILAGGHLGYEEVKGVLRDVLPLETEGSLNSGVSESLLSAFLIGQRMNRETDRELKAYC 240
Query: 279 LAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPK 338
LAFDDE G PPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSC GES LLHG EWMPPK
Sbjct: 241 LAFDDEHGAPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCCGESSLLHGVEWMPPK 300
Query: 339 GGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRP 398
GGVTEEQMLKFMGA+T+LSV QAKEL+EDE+ GFAY+SLREARPSLYSLI +REHIKKRP
Sbjct: 301 GGVTEEQMLKFMGANTHLSVQQAKELIEDEKAGFAYLSLREARPSLYSLIEMREHIKKRP 360
Query: 399 PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTR 458
P+AT+EKVQQFVRA G+EAIVAGFYHEGYEEPLLMLM+RRGVHSGLVVKGEEGALSMTTR
Sbjct: 361 PLATTEKVQQFVRATGKEAIVAGFYHEGYEEPLLMLMRRRGVHSGLVVKGEEGALSMTTR 420
Query: 459 LRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSV 518
+R+ +ASKG PVNYCSGFRSL+ ++ E DGVSRQSFNLEV+A NYGFEPT TPR DRSV
Sbjct: 421 VRAASASKGFPVNYCSGFRSLSSDTALEADGVSRQSFNLEVDARNYGFEPTETPRTDRSV 480
Query: 519 SKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKR 578
SKNIELGLAALRGEKG YDRIVLNAG+VDHLLG +GAEDV+VAM+RA+EAIDSGKALK+
Sbjct: 481 SKNIELGLAALRGEKGAAYDRIVLNAGIVDHLLGSEGAEDVAVAMERAKEAIDSGKALKK 540
Query: 579 LLNYIKISHKLK 590
LLNYI+IS K+K
Sbjct: 541 LLNYIEISRKIK 552
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|125537955|gb|EAY84350.1| hypothetical protein OsI_05725 [Oryza sativa Indica Group] gi|125580691|gb|EAZ21622.1| hypothetical protein OsJ_05251 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/517 (75%), Positives = 443/517 (85%), Gaps = 2/517 (0%)
Query: 74 NPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDE 133
NPA+S SYR +P+PN T+LEAQA+VCTGP QTRPL E++A +VLDTILRS G+LKDE
Sbjct: 72 NPAVSDSYRPPGMPRPNATVLEAQARVCTGPEQTRPLGEEQAMRVLDTILRSGMGELKDE 131
Query: 134 EEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGS 193
VS AQLGAFF+ MTIRAN+FPEATQWSEGERRAM+ FWP L+ LPP+V FIADPEG+
Sbjct: 132 P-VSSAQLGAFFAGMTIRANSFPEATQWSEGERRAMSLFWPRLVNVLPPEVKFIADPEGT 190
Query: 194 IMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDN-KAPGV 252
IMG G GP Y G EMRLV ALREVLAGGHLGYEEVQGVL+DVLP+++ + + V
Sbjct: 191 IMGANGLTGPRYVGQSTAEMRLVSALREVLAGGHLGYEEVQGVLKDVLPVELASANSTMV 250
Query: 253 SESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRS 312
+E+LL+AFLIGQRMNRETDRELK YCLAFDDELGP PVADVKSLTHYGEPYDGNTRFFRS
Sbjct: 251 NEALLAAFLIGQRMNRETDRELKGYCLAFDDELGPTPVADVKSLTHYGEPYDGNTRFFRS 310
Query: 313 TLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372
TLFVAAVR+CYGE+CLLHG EWMPPKGG+TE QMLKFMGA+T+LS LQAK LLEDE GF
Sbjct: 311 TLFVAAVRACYGEACLLHGVEWMPPKGGITEGQMLKFMGANTHLSTLQAKTLLEDENTGF 370
Query: 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLL 432
AY+ L+EA P LYS+IGLREHIKKRPP+ATSEKVQQFVRA+GRE++VAGFYH GYE+PLL
Sbjct: 371 AYLGLQEACPPLYSIIGLREHIKKRPPLATSEKVQQFVRARGRESMVAGFYHVGYEDPLL 430
Query: 433 MLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSR 492
MLM+RR VH+GLVVKGEEGALSMTT+ RS +ASKGLPVN+CSGFR N E DG+SR
Sbjct: 431 MLMRRRTVHAGLVVKGEEGALSMTTKERSAHASKGLPVNHCSGFRIPNSTDFSETDGISR 490
Query: 493 QSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLG 552
+ F++ VNA GFE T TPR DRSV KN+ELGLAAL GEKGP YDRIVLNA MVDHLLG
Sbjct: 491 EGFSVIVNAQELGFESTETPRTDRSVLKNLELGLAALSGEKGPAYDRIVLNAAMVDHLLG 550
Query: 553 CDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589
C GAED+ A+DRAREAIDSGKAL RL+NYIKISHK+
Sbjct: 551 CTGAEDIKSALDRAREAIDSGKALSRLMNYIKISHKV 587
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 590 | ||||||
| TIGR_CMR|CHY_1585 | 340 | CHY_1585 "anthranilate phospho | 0.393 | 0.682 | 0.217 | 2.2e-08 | |
| TIGR_CMR|BA_1250 | 341 | BA_1250 "anthranilate phosphor | 0.210 | 0.363 | 0.279 | 1.1e-06 |
| TIGR_CMR|CHY_1585 CHY_1585 "anthranilate phosphoribosyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 219 LREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYC 278
L ++ G +L + E + +++ + K +E+ ++AFL+ +M ET+ E+ A+
Sbjct: 6 LERLMRGENLNFSEALATMNELM----EGK---YTEAQVAAFLVALKMKGETEEEISAFA 58
Query: 279 LAFDDELGPPPVADVKSLTHY-GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP 337
LA ++ + + L G DG F ST V G HG +
Sbjct: 59 LALREK-ARRVITQTEGLVDTCGTGGDGRQTFNISTAAAFVVAGA-GIPVAKHGNRSVSS 116
Query: 338 KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKR 397
+ G + +L+ +G + +L +++ IGF + P++ + R I R
Sbjct: 117 RSGSAD--VLEALGVNIDLDAKGTARCVDEIGIGFLFAP--NLHPAMRHVAKTRREIGVR 172
Query: 398 PPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA--LSM 455
+ G+ V G + +E L ++ GV VV G G +S+
Sbjct: 173 TVFNILGPLANPANIVGQ---VLGVFTPELQETLAKVLNNLGVERAFVVHGHGGLDEVSL 229
Query: 456 T--TRLRSVNASK 466
T TR+ +N K
Sbjct: 230 TGPTRVFELNRGK 242
|
|
| TIGR_CMR|BA_1250 BA_1250 "anthranilate phosphoribosyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 96 (38.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 459 LRSVNASKGLPVNYCSGFRSLNVESTFEGDG---VSRQSFNLE--VNASNYGFEPTNTPR 513
L+ + + L VN SGF E++ +G+ + + + +E + YGF
Sbjct: 206 LQKLGRKQALVVNG-SGFLD---EASLQGENHVVILKDNEIVETSIEPEKYGFSIVKNEE 261
Query: 514 ADRSVSK-NIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDS 572
SK N ++ L L GEK D ++ NAG+ L A+ + + A +IDS
Sbjct: 262 IRGGNSKENAKITLGVLSGEKSVYRDTVLFNAGLA--LFANGKAKTIEEGITLAAHSIDS 319
Query: 573 GKALKRLLNYIKISHK 588
GKAL +L I S++
Sbjct: 320 GKALAKLNLLIAASNE 335
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00009480001 | SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (593 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| PRK07394 | 342 | PRK07394, PRK07394, hypothetical protein; Provisio | 3e-30 | |
| COG0547 | 338 | COG0547, TrpD, Anthranilate phosphoribosyltransfer | 3e-25 | |
| PRK00188 | 339 | PRK00188, trpD, anthranilate phosphoribosyltransfe | 7e-08 | |
| TIGR01245 | 330 | TIGR01245, trpD, anthranilate phosphoribosyltransf | 1e-07 | |
| PRK14607 | 534 | PRK14607, PRK14607, bifunctional glutamine amidotr | 1e-07 | |
| PLN02641 | 343 | PLN02641, PLN02641, anthranilate phosphoribosyltra | 5e-07 | |
| PRK09071 | 323 | PRK09071, PRK09071, hypothetical protein; Validate | 2e-04 | |
| pfam02885 | 66 | pfam02885, Glycos_trans_3N, Glycosyl transferase f | 8e-04 |
| >gnl|CDD|168934 PRK07394, PRK07394, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 53/333 (15%)
Query: 259 AFLIGQRMNRETDRELKAYCLAFDDELGP--PPVADVKSLTHYGEPYDGNTRFFRSTLFV 316
AFLI R+ R T EL +D ELGP ++ + +G PYDG +R
Sbjct: 46 AFLIAHRIKRPTPEELAGMLDTYD-ELGPKLQSPSNQRPPIVFGMPYDGRSRTAPIYPLT 104
Query: 317 AAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGAS-TNLSVLQAKELLEDEEIGFAYV 375
A + + G+ +LHG + MP K GV ++ + +G T LS+ Q +E E+ G A++
Sbjct: 105 ALILAAAGQPVVLHGGDRMPTKYGVPLVELWQGLGVDLTGLSLEQVQEGF--EQTGLAFI 162
Query: 376 SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLM 435
+ P SLI R+ I KRPP+AT E + + QG +V+GF H E +
Sbjct: 163 YQPDHFPLAESLIPYRDEIGKRPPLATLELI--WTPHQGDHHLVSGFVHPPTEARAWEAL 220
Query: 436 KRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSF 495
+ RG + VKG EG S LP++ + FE
Sbjct: 221 ELRGETNFTTVKGLEG-------------SCDLPISR-TAIIGRVQNGHFE--------- 257
Query: 496 NLEVNASNYGFEPTNTPRADRSVSKNIELG---------LAALRGEKGPTYDRIVLNAGM 546
L ++ +YG K++ AAL GE GP ++ N G
Sbjct: 258 RLILHPRDYGCG-----------GKDVPWESTEEWLEQAQAALNGEPGPLTQALIWNGGF 306
Query: 547 VDHLLGCDGAEDVSVAMDRAREAIDSGKALKRL 579
G + + +++A E ++SGKAL++L
Sbjct: 307 YLWRAGI--SSSLEEGIEKAEELLNSGKALQKL 337
|
Length = 342 |
| >gnl|CDD|223621 COG0547, TrpD, Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 91/388 (23%), Positives = 142/388 (36%), Gaps = 61/388 (15%)
Query: 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETD 271
M L L+++ G L EE + + + +L + S + + AFL R+ ET
Sbjct: 1 SMDLRKILKKLGRGRDLDREEARELFKAIL-------SGEASPAQIGAFLTALRIKGETP 53
Query: 272 RELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHG 331
E+ + A + PV + G DG ST A V + G HG
Sbjct: 54 EEIAGFAEAMREHAPKLPVPAADPVDIVGTGGDGANTINISTA-AAIVAAAAGVPVAKHG 112
Query: 332 AEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLR 391
+ K G + +L+ +G + LS QA LE E G ++ P++ + +R
Sbjct: 113 NRSVSSKSGSAD--VLEALGVNLELSPEQAARALE--ETGIGFLFAPAYHPAMKHVAPVR 168
Query: 392 EHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG 451
+ + R + RA + + G YH E L ++ GV LVV G EG
Sbjct: 169 KELGVRTIFNLLGPLLNPARA---KLQLIGVYHPELVELLAEALRLLGVERALVVHGLEG 225
Query: 452 ----ALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFE 507
+ TT + + + + ++G E
Sbjct: 226 LDEVTPTGTTLVAELKDGEIR---------------------------EYTLTPEDFGLE 258
Query: 508 -------PTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVS 560
P P N E+ A L GE+GP D + LNA + G AE +
Sbjct: 259 RAPLEDLPGGDPEE------NAEILRAVLAGEEGPARDAVALNAAAALYAAG--KAESLK 310
Query: 561 VAMDRAREAIDSGKALKRLLNYIKISHK 588
+ A EAIDSG AL++L + S
Sbjct: 311 EGIALALEAIDSGAALEKLEELVAFSKS 338
|
Length = 338 |
| >gnl|CDD|234682 PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (132), Expect = 7e-08
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 39/183 (21%)
Query: 416 EAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG----ALSMTTRLRSVNASKGLPVN 471
+ + G Y EP+ ++KR G LVV G +G +L+ T + +
Sbjct: 188 KRQLIGVYSPDLLEPMAEVLKRLGSKRALVVHGSDGLDEISLTGPTTVAELK-------- 239
Query: 472 YCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD---RSVSKNIELGLAA 528
DG R+ + ++G P D +N + A
Sbjct: 240 ----------------DGEIREY---TLTPEDFGLPRA--PLEDLRGGDPEENAAILRAV 278
Query: 529 LRG-EKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISH 587
L+G G D ++LNA L A+D+ ++ AREAIDSG AL +L + S
Sbjct: 279 LQGKGPGAARDAVLLNAAAA--LYVAGKADDLKEGVELAREAIDSGAALAKLEELVAFSQ 336
Query: 588 KLK 590
+LK
Sbjct: 337 ELK 339
|
Length = 339 |
| >gnl|CDD|233329 TIGR01245, trpD, anthranilate phosphoribosyltransferase | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 1e-07
Identities = 80/384 (20%), Positives = 141/384 (36%), Gaps = 71/384 (18%)
Query: 219 LREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYC 278
L +++ G L +E + ++++++ + S + ++A L R+ ET E+ +
Sbjct: 1 LEKLIDGKDLSRDEAEQLMKEIM-------SGEASPAQIAAILAALRIKGETPEEITGFA 53
Query: 279 LAFDDELGPPPVADVKSLTHY-GEPYDGNTRFFRSTL--FVAAVRSCYGESCLLHGAEWM 335
A + P V+ L G DG ST FVAA G HG +
Sbjct: 54 KAMREHAVKVPGRPVEDLVDIVGTGGDGANTINISTASAFVAAA---AGVKVAKHGNRSV 110
Query: 336 PPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIK 395
K G + +L+ +G + +L + LE+ IGF + L P++ + +R +
Sbjct: 111 SSKSGSAD--VLEALGVNLDLGPEKVARSLEETGIGFLFAPLYH--PAMKHVAPVRRELG 166
Query: 396 KRP------PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGE 449
R P+ + + Q V G Y E + +K GV LVV G+
Sbjct: 167 VRTVFNLLGPLTNPARP----KYQ-----VIGVYDPDLVEVMAEALKNLGVKRALVVHGD 217
Query: 450 EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPT 509
+G ++ + A + + + + ++G
Sbjct: 218 DGLDEISLTGPTTVAE-------------------LKDGEIREYTLD----PEDFGLPRA 254
Query: 510 -------NTPRADRSVSKNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSV 561
+P N E+ LRG+ G D + LNA L A D+
Sbjct: 255 PLEELAGGSPEE------NAEILRDILRGKGSGAKRDIVALNAAAA--LYVAGRASDLKE 306
Query: 562 AMDRAREAIDSGKALKRLLNYIKI 585
++ A EAIDSG A ++L +
Sbjct: 307 GVELALEAIDSGAAAEKLEELVAF 330
|
In many widely different species, including E. coli, Thermotoga maritima, and Archaeoglobus fulgidus, this enzymatic domain (anthranilate phosphoribosyltransferase) is found C-terminal to glutamine amidotransferase; the fusion protein is designated anthranilate synthase component II (EC 4.1.3.27) [Amino acid biosynthesis, Aromatic amino acid family]. Length = 330 |
| >gnl|CDD|237764 PRK14607, PRK14607, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 86/394 (21%), Positives = 150/394 (38%), Gaps = 70/394 (17%)
Query: 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETD 271
E+ + L++++ G L +EE + V+ D+ D A +++ ++ FL RM ET
Sbjct: 192 EIDIKSYLKKLVEGEDLSFEEAEDVMEDI----TDGNA---TDAQIAGFLTALRMKGETA 244
Query: 272 RELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHG 331
EL + ++ P +++ G DG F ST V + G HG
Sbjct: 245 DELAGFASVMREKSRHIPAPSPRTVDTCGTGGDGFGTFNISTTSAFVVAAA-GVPVAKHG 303
Query: 332 AEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLR 391
+ K G + +L+ +G ++ +A +L E GF+++ P++ R
Sbjct: 304 NRAVSSKSGSAD--VLEALGVKLEMTPEEAASVLR--ETGFSFLFAPLFHPAMKHAAPAR 359
Query: 392 EHIKKRP------PVATSEKVQ-QFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGL 444
+ R P+ +V+ Q V G + Y EPL ++R G +
Sbjct: 360 RELGIRTAFNLLGPLTNPARVKYQIV----------GVFDPSYAEPLAQALQRLGTERAM 409
Query: 445 VVKGEEG--ALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNAS 502
VV G +G +S + + G V Y + L
Sbjct: 410 VVSGIDGYDEISTCGPTQILELEDGEIVTYT----------------FDPEELGL----- 448
Query: 503 NYGFEPTNTPRADR------SVSKNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDG 555
R D +N L L+GE + P D + LNAG +L+G
Sbjct: 449 ---------KRVDPEELKGGDPQENYRLAEDVLKGEPRRPQRDAVALNAGAALYLVG--E 497
Query: 556 AEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589
A+ + + +A + ID G+A K+L + +S L
Sbjct: 498 ADSIKEGVGKALDLIDDGRAYKKLEEVMDLSKTL 531
|
Length = 534 |
| >gnl|CDD|215345 PLN02641, PLN02641, anthranilate phosphoribosyltransferase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 527 AALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKIS 586
L GEKG D ++LNA LL A+ ++ + ARE +SGKA+K L ++IKIS
Sbjct: 276 DVLSGEKGAIADALILNAAAA--LLVSGLAKTLAEGVALARETQESGKAIKTLDSWIKIS 333
Query: 587 HKLK 590
+LK
Sbjct: 334 QELK 337
|
Length = 343 |
| >gnl|CDD|181637 PRK09071, PRK09071, hypothetical protein; Validated | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 257 LSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA---DVKSLTHYGEPYDGNTR----F 309
L AFL+ R+ ET EL + A + L PP+A D S Y G R +
Sbjct: 43 LGAFLMLLRVKEETAEELAGFVEAIRERLQAPPLAVDLDWPS-------YAGKRRHLPWY 95
Query: 310 FRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEE 369
+ +A G LLHG G + EQ+L+ +G S +A++ L EE
Sbjct: 96 LLAAKLLAQ----NGYRVLLHGGG-GHTAGRLYTEQLLEALGIPIARSWQEAEQAL--EE 148
Query: 370 IGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVR----AQGREAIVAGFYHE 425
AY+ L + P L +I LR + R P+ T R + A + G +H
Sbjct: 149 HNIAYLPLEDFAPQLQRMIDLRNTLGLRSPINT------LARLLNPLNAK-ASLQGIFHP 201
Query: 426 GYEEPLLMLMKRRGVHSGLVVKGEEG 451
GY++ + G + LV KGE G
Sbjct: 202 GYQQLHREAARLLGDQNALVFKGEGG 227
|
Length = 323 |
| >gnl|CDD|145834 pfam02885, Glycos_trans_3N, Glycosyl transferase family, helical bundle domain | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 8e-04
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 214 RLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRE 273
+ ++++L G L EE + ++ +L +A S++ ++AFL+ R+ ET E
Sbjct: 1 MIKELIKKLLRGEDLSREEAEALMDAIL----SGEA---SDAQIAAFLMALRIKGETPEE 53
Query: 274 L 274
+
Sbjct: 54 I 54
|
This family includes anthranilate phosphoribosyltransferase (TrpD), thymidine phosphorylase. All these proteins can transfer a phosphorylated ribose substrate. Length = 66 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| PRK09522 | 531 | bifunctional glutamine amidotransferase/anthranila | 100.0 | |
| PRK14607 | 534 | bifunctional glutamine amidotransferase/anthranila | 100.0 | |
| COG0547 | 338 | TrpD Anthranilate phosphoribosyltransferase [Amino | 100.0 | |
| PLN02641 | 343 | anthranilate phosphoribosyltransferase | 100.0 | |
| PRK07394 | 342 | hypothetical protein; Provisional | 100.0 | |
| PRK00188 | 339 | trpD anthranilate phosphoribosyltransferase; Provi | 100.0 | |
| TIGR01245 | 330 | trpD anthranilate phosphoribosyltransferase. In ma | 100.0 | |
| PRK08136 | 317 | glycosyl transferase family protein; Provisional | 100.0 | |
| PRK09071 | 323 | hypothetical protein; Validated | 100.0 | |
| PF00591 | 252 | Glycos_transf_3: Glycosyl transferase family, a/b | 100.0 | |
| PRK06078 | 434 | pyrimidine-nucleoside phosphorylase; Reviewed | 100.0 | |
| KOG1438 | 373 | consensus Anthranilate phosphoribosyltransferase [ | 100.0 | |
| TIGR02644 | 405 | Y_phosphoryl pyrimidine-nucleoside phosphorylase. | 100.0 | |
| PRK04350 | 490 | thymidine phosphorylase; Provisional | 100.0 | |
| COG0512 | 191 | PabA Anthranilate/para-aminobenzoate synthases com | 100.0 | |
| PRK05820 | 440 | deoA thymidine phosphorylase; Reviewed | 100.0 | |
| TIGR02645 | 493 | ARCH_P_rylase putative thymidine phosphorylase. Me | 100.0 | |
| TIGR02643 | 437 | T_phosphoryl thymidine phosphorylase. Thymidine ph | 100.0 | |
| TIGR03327 | 500 | AMP_phos AMP phosphorylase. This enzyme family is | 100.0 | |
| KOG0026 | 223 | consensus Anthranilate synthase, beta chain [Amino | 100.0 | |
| PRK08007 | 187 | para-aminobenzoate synthase component II; Provisio | 100.0 | |
| PLN02889 | 918 | oxo-acid-lyase/anthranilate synthase | 100.0 | |
| PRK07649 | 195 | para-aminobenzoate/anthranilate synthase glutamine | 99.97 | |
| TIGR00566 | 188 | trpG_papA glutamine amidotransferase of anthranila | 99.97 | |
| COG0213 | 435 | DeoA Thymidine phosphorylase [Nucleotide transport | 99.97 | |
| PRK06774 | 191 | para-aminobenzoate synthase component II; Provisio | 99.97 | |
| PLN02335 | 222 | anthranilate synthase | 99.96 | |
| CHL00101 | 190 | trpG anthranilate synthase component 2 | 99.96 | |
| PRK05637 | 208 | anthranilate synthase component II; Provisional | 99.96 | |
| PRK06895 | 190 | putative anthranilate synthase component II; Provi | 99.96 | |
| PRK08857 | 193 | para-aminobenzoate synthase component II; Provisio | 99.96 | |
| KOG1224 | 767 | consensus Para-aminobenzoate (PABA) synthase ABZ1 | 99.95 | |
| PRK05670 | 189 | anthranilate synthase component II; Provisional | 99.95 | |
| PLN02771 | 415 | carbamoyl-phosphate synthase (glutamine-hydrolyzin | 99.94 | |
| COG0505 | 368 | CarA Carbamoylphosphate synthase small subunit [Am | 99.94 | |
| PRK07765 | 214 | para-aminobenzoate synthase component II; Provisio | 99.93 | |
| TIGR01368 | 358 | CPSaseIIsmall carbamoyl-phosphate synthase, small | 99.93 | |
| TIGR01823 | 742 | PabB-fungal aminodeoxychorismate synthase, fungal | 99.93 | |
| TIGR01815 | 717 | TrpE-clade3 anthranilate synthase, alpha proteobac | 99.92 | |
| PRK12564 | 360 | carbamoyl phosphate synthase small subunit; Review | 99.92 | |
| CHL00197 | 382 | carA carbamoyl-phosphate synthase arginine-specifi | 99.92 | |
| PRK12838 | 354 | carbamoyl phosphate synthase small subunit; Review | 99.92 | |
| cd01743 | 184 | GATase1_Anthranilate_Synthase Type 1 glutamine ami | 99.92 | |
| PRK13566 | 720 | anthranilate synthase; Provisional | 99.92 | |
| cd01744 | 178 | GATase1_CPSase Small chain of the glutamine-depend | 99.91 | |
| PF00117 | 192 | GATase: Glutamine amidotransferase class-I; InterP | 99.9 | |
| PRK00758 | 184 | GMP synthase subunit A; Validated | 99.9 | |
| PLN02347 | 536 | GMP synthetase | 99.88 | |
| cd01742 | 181 | GATase1_GMP_Synthase Type 1 glutamine amidotransfe | 99.88 | |
| TIGR00888 | 188 | guaA_Nterm GMP synthase (glutamine-hydrolyzing), N | 99.87 | |
| PRK06490 | 239 | glutamine amidotransferase; Provisional | 99.84 | |
| PRK13170 | 196 | hisH imidazole glycerol phosphate synthase subunit | 99.83 | |
| CHL00188 | 210 | hisH imidazole glycerol phosphate synthase subunit | 99.82 | |
| cd01748 | 198 | GATase1_IGP_Synthase Type 1 glutamine amidotransfe | 99.79 | |
| cd01745 | 189 | GATase1_2 Subgroup of proteins having the Type 1 g | 99.78 | |
| PRK13152 | 201 | hisH imidazole glycerol phosphate synthase subunit | 99.78 | |
| PRK09065 | 237 | glutamine amidotransferase; Provisional | 99.78 | |
| PRK07567 | 242 | glutamine amidotransferase; Provisional | 99.78 | |
| PRK13181 | 199 | hisH imidazole glycerol phosphate synthase subunit | 99.77 | |
| PRK00074 | 511 | guaA GMP synthase; Reviewed | 99.77 | |
| KOG0370 | 1435 | consensus Multifunctional pyrimidine synthesis pro | 99.77 | |
| cd01741 | 188 | GATase1_1 Subgroup of proteins having the Type 1 g | 99.76 | |
| PRK13141 | 205 | hisH imidazole glycerol phosphate synthase subunit | 99.75 | |
| COG0518 | 198 | GuaA GMP synthase - Glutamine amidotransferase dom | 99.74 | |
| TIGR01855 | 196 | IMP_synth_hisH imidazole glycerol phosphate syntha | 99.74 | |
| PRK11366 | 254 | puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; | 99.73 | |
| PRK07053 | 234 | glutamine amidotransferase; Provisional | 99.72 | |
| PRK14004 | 210 | hisH imidazole glycerol phosphate synthase subunit | 99.72 | |
| PRK13527 | 200 | glutamine amidotransferase subunit PdxT; Provision | 99.71 | |
| PRK13146 | 209 | hisH imidazole glycerol phosphate synthase subunit | 99.71 | |
| cd01746 | 235 | GATase1_CTP_Synthase Type 1 glutamine amidotransfe | 99.69 | |
| PRK05665 | 240 | amidotransferase; Provisional | 99.68 | |
| PRK08250 | 235 | glutamine amidotransferase; Provisional | 99.67 | |
| PRK13143 | 200 | hisH imidazole glycerol phosphate synthase subunit | 99.66 | |
| PF02885 | 66 | Glycos_trans_3N: Glycosyl transferase family, heli | 99.66 | |
| cd01747 | 273 | GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot | 99.56 | |
| PRK13525 | 189 | glutamine amidotransferase subunit PdxT; Provision | 99.53 | |
| PRK13142 | 192 | hisH imidazole glycerol phosphate synthase subunit | 99.51 | |
| PLN02617 | 538 | imidazole glycerol phosphate synthase hisHF | 99.47 | |
| TIGR00337 | 525 | PyrG CTP synthase. CTP synthase is involved in pyr | 99.43 | |
| cd01749 | 183 | GATase1_PB Glutamine Amidotransferase (GATase_I) i | 99.37 | |
| TIGR03800 | 184 | PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl | 99.36 | |
| PF07722 | 217 | Peptidase_C26: Peptidase C26; InterPro: IPR011697 | 99.32 | |
| PRK05380 | 533 | pyrG CTP synthetase; Validated | 99.28 | |
| COG0118 | 204 | HisH Glutamine amidotransferase [Amino acid transp | 99.26 | |
| KOG1622 | 552 | consensus GMP synthase [Nucleotide transport and m | 99.21 | |
| KOG3179 | 245 | consensus Predicted glutamine synthetase [Nucleoti | 99.2 | |
| COG2071 | 243 | Predicted glutamine amidotransferases [General fun | 99.16 | |
| PLN02327 | 557 | CTP synthase | 99.14 | |
| PRK06186 | 229 | hypothetical protein; Validated | 98.92 | |
| TIGR01737 | 227 | FGAM_synth_I phosphoribosylformylglycinamidine syn | 98.83 | |
| PRK05368 | 302 | homoserine O-succinyltransferase; Provisional | 98.61 | |
| PLN02832 | 248 | glutamine amidotransferase subunit of pyridoxal 5' | 98.51 | |
| PRK13526 | 179 | glutamine amidotransferase subunit PdxT; Provision | 98.47 | |
| PRK03619 | 219 | phosphoribosylformylglycinamidine synthase I; Prov | 98.14 | |
| COG0504 | 533 | PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide | 97.61 | |
| KOG0623 | 541 | consensus Glutamine amidotransferase/cyclase [Amin | 97.47 | |
| PF01174 | 188 | SNO: SNO glutamine amidotransferase family; InterP | 96.92 | |
| cd01740 | 238 | GATase1_FGAR_AT Type 1 glutamine amidotransferase | 96.83 | |
| KOG2387 | 585 | consensus CTP synthase (UTP-ammonia lyase) [Nucleo | 96.39 | |
| COG0311 | 194 | PDX2 Predicted glutamine amidotransferase involved | 96.35 | |
| cd01750 | 194 | GATase1_CobQ Type 1 glutamine amidotransferase (GA | 96.14 | |
| PRK01175 | 261 | phosphoribosylformylglycinamidine synthase I; Prov | 96.01 | |
| cd03130 | 198 | GATase1_CobB Type 1 glutamine amidotransferase (GA | 93.91 | |
| cd03128 | 92 | GAT_1 Type 1 glutamine amidotransferase (GATase1)- | 93.91 | |
| cd01653 | 115 | GATase1 Type 1 glutamine amidotransferase (GATase1 | 92.82 | |
| KOG1559 | 340 | consensus Gamma-glutamyl hydrolase [Coenzyme trans | 92.1 | |
| COG2313 | 310 | IndA Uncharacterized enzyme involved in pigment bi | 91.26 | |
| cd03131 | 175 | GATase1_HTS Type 1 glutamine amidotransferase (GAT | 88.89 | |
| PRK06278 | 476 | cobyrinic acid a,c-diamide synthase; Validated | 88.4 | |
| PF04282 | 71 | DUF438: Family of unknown function (DUF438); Inter | 88.2 | |
| TIGR01382 | 166 | PfpI intracellular protease, PfpI family. The memb | 87.48 | |
| PRK00784 | 488 | cobyric acid synthase; Provisional | 87.45 | |
| cd03169 | 180 | GATase1_PfpI_1 Type 1 glutamine amidotransferase ( | 87.05 | |
| PRK05703 | 424 | flhF flagellar biosynthesis regulator FlhF; Valida | 86.77 | |
| cd03134 | 165 | GATase1_PfpI_like A type 1 glutamine amidotransfer | 83.66 |
| >PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-107 Score=901.67 Aligned_cols=480 Identities=16% Similarity=0.216 Sum_probs=427.5
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|++.||.|| +||+++|.++.|+|||...... ..++. ...|++||||||||+|. |.+...++ +
T Consensus 3 ~iLiIDn~dsft~nl~~~lr~~g~~v~V~~~~~~~~~~------~~~l~-~~~~~~IIlSpGPg~p~---d~~~~~~i-~ 71 (531)
T PRK09522 3 DILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTL------IERLA-TMSNPVLMLSPGPGVPS---EAGCMPEL-L 71 (531)
T ss_pred eEEEEeCCChHHHHHHHHHHHCCCCEEEEECCCCCccC------HHHHH-hcCcCEEEEcCCCCChh---hCCCCHHH-H
Confidence 7899999999 8899999999999998321000 00000 11468999999999998 77888888 8
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEeec
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
+.+..++|||| |||||+|+.+|||+|.+. +.+.||+++ + .+.+.+++|||+.|..+|++++++|..
T Consensus 72 ~~~~~~iPILGIClG~QlLa~a~GG~V~~~-~~~~~G~~~~i~~~~~~lf~~~~~~~~v~~~Hs~~v~~lP~~l~vlA~s 150 (531)
T PRK09522 72 TRLRGKLPIIGICLGHQAIVEAYGGYVGQA-GEILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHF 150 (531)
T ss_pred HHHhcCCCEEEEcHHHHHHHHhcCCEEEeC-CceeeeeEEEEeecCCccccCCCCCcEEEEehheecccCCCCcEEEEec
Confidence 87878999999 999999999999999999 899999865 1 126899999999999999999999966
Q ss_pred CCcEEEEEcC----CCCcccCCC---chhh------------------HHHHHHHHhhcCCCCCHHHHHHHHHHhcCCcc
Q 007779 191 EGSIMGGGGS----IGPHYSGND---PREM------------------RLVGALREVLAGGHLGYEEVQGVLRDVLPLQV 245 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs---~~~m------------------~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~ 245 (590)
|+.+||++|+ ||||||||| +.|+ .++++|+++..|++||+|||+++|+.||
T Consensus 151 d~~v~ai~~~~~~i~GVQFHPEs~~T~~G~~il~NFl~~~~~~~~~~~~~~~~l~~~~~~~~Lt~eea~~~~~~il---- 226 (531)
T PRK09522 151 NGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLSQQESHQLFSAVV---- 226 (531)
T ss_pred CCCEEEEEECCCCEEEEEecCccccCcchHHHHHHHHHHHhhcCCCCCCHHHHHHHhhcCCCCCHHHHHHHHHHHH----
Confidence 8999999996 999999998 5554 3567778889999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCCccccchHHHHHHHhcCCC
Q 007779 246 DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGE 325 (590)
Q Consensus 246 ~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv 325 (590)
+|+++|.|+||||++||+||||+|||+||++||++++.+++.++...+|+|||||||++|||+||+ +|+|+|++|+
T Consensus 227 ---~g~~~~~qi~AfL~alr~kget~eEl~g~~~a~~~~~~~~~~~~~~~iD~~gtGgdg~~t~nist~-aa~v~A~~Gv 302 (531)
T PRK09522 227 ---RGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTA-SAFVAAACGL 302 (531)
T ss_pred ---cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCcccccCCCCCCCCCcccHHH-HHHHHHhCCC
Confidence 999999999999999999999999999999999998876654333479999999999999999998 9999999999
Q ss_pred cEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchh
Q 007779 326 SCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEK 405 (590)
Q Consensus 326 ~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k 405 (590)
||+|||||++||++|| +|+||+||+++++++++++++|++ .||+|+++|.|||+|++++++|++||+||++|+...
T Consensus 303 ~V~kHG~r~~ss~~Gs--advlealGi~~~~~~~~~~~~l~~--~g~~fl~ap~~hpam~~~~~~R~~Lg~rT~fN~lgp 378 (531)
T PRK09522 303 KVAKHGNRSVSSKSGS--SDLLAAFGINLDMNADKSRQALDE--LGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGP 378 (531)
T ss_pred cEEEeCCCCCCCCccH--HHHHHHcCCCCCCCHHHHHHHHHH--hCcEEEEhhHhCHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 9999999999999999 999999999999999999999999 667778899999999999999999999998888765
Q ss_pred hhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeE
Q 007779 406 VQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTF 485 (590)
Q Consensus 406 ~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~ 485 (590)
+ +||+++++||+|||||+|.++++++++++|.++++|||| +|+||+++.+ +|.++
T Consensus 379 L---~NPa~~~~~v~Gv~~~~~~~~~a~~l~~lG~~~~~vv~G-~G~DEis~~~---------------------~t~v~ 433 (531)
T PRK09522 379 L---INPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHS-GGMDEVSLHA---------------------PTIVA 433 (531)
T ss_pred h---cCCCCCCcEEEEeeCHHHHHHHHHHHHHhCCCeEEEEEC-CCccccCCCC---------------------ceEEE
Confidence 4 789999999999999999999999999999999999999 8999998653 46666
Q ss_pred e-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCCCC-chhHHHHHHHHHHHHHhcCCCCCCHHHH
Q 007779 486 E-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGEKG-PTYDRIVLNAGMVDHLLGCDGAEDVSVA 562 (590)
Q Consensus 486 ~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~~~-~~~d~v~lNAa~~L~l~g~g~a~s~~eg 562 (590)
+ .+|++++ ++|+|+|||++..+++++ ++++++|+++++++|+|+.. +..|+|++|||++||+.| .+|++||
T Consensus 434 ~~~~g~i~~---~~~~P~d~Gl~~~~~~~i~g~~~~~na~~~~~vl~G~~~~~~~~~v~~naa~~l~~~g---~~~l~~g 507 (531)
T PRK09522 434 ELHDGEIKS---YQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHG---HEDLQAN 507 (531)
T ss_pred EEcCCeEEE---EEECHHHcCCCCCCHHHhcCCCHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHcC---CCCHHHH
Confidence 5 4777654 999999999999998876 67999999999999999943 457999999999999986 3899999
Q ss_pred HHHHHHHHHchHHHHHHHHHHH
Q 007779 563 MDRAREAIDSGKALKRLLNYIK 584 (590)
Q Consensus 563 ~~~A~e~i~SG~A~~~L~~~~~ 584 (590)
+++|+++|+||+|+++|++|++
T Consensus 508 ~~~a~~~i~sG~a~~~l~~l~~ 529 (531)
T PRK09522 508 AQTVLEVLRSGSAYDRVTALAA 529 (531)
T ss_pred HHHHHHHHhCCHHHHHHHHHHh
Confidence 9999999999999999999986
|
|
| >PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-105 Score=884.78 Aligned_cols=484 Identities=22% Similarity=0.338 Sum_probs=435.8
Q ss_pred eeEeeccccH------HHHHHhCCc-eEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLK-ESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~-~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
+|++.||.|| ++|+++|.+ +.|++++..+.++.. ...||+||||||||+|. +.+...++
T Consensus 1 ~il~idn~dsft~nl~~~l~~~g~~~v~~~~~~~~~~~~~~----------~~~~d~vIlsgGP~~p~---~~~~~~~l- 66 (534)
T PRK14607 1 MIILIDNYDSFTYNIYQYIGELGPEEIEVVRNDEITIEEIE----------ALNPSHIVISPGPGRPE---EAGISVEV- 66 (534)
T ss_pred CEEEEECchhHHHHHHHHHHHcCCCeEEEECCCCCCHHHHH----------hcCCCEEEECCCCCChh---hCCccHHH-
Confidence 3899999999 778888985 889988877665421 11468999999999998 66777887
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CC--------ceeEEeccchhccc--cCCCcEEEE
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EG--------ERRAMNTFWPLLMR--ALPPDVIFI 187 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~--------~~~~~~ryHsl~v~--~~p~~l~v~ 187 (590)
++.+..++|+|| |||||.|+.+|||+|.+. +.++||.++ .+ ..+.+.+|||+.|+ ++|++++++
T Consensus 67 i~~~~~~~PvLGIClG~QlLa~a~Gg~V~~~-~~~~~G~~~~v~~~~~~lf~~~~~~~~v~~~Hs~~v~~~~lp~~~~vl 145 (534)
T PRK14607 67 IRHFSGKVPILGVCLGHQAIGYAFGGKIVHA-KRILHGKTSPIDHNGKGLFRGIPNPTVATRYHSLVVEEASLPECLEVT 145 (534)
T ss_pred HHHhhcCCCEEEEcHHHHHHHHHcCCeEecC-CccccCCceeEEECCCcchhcCCCCcEEeeccchheecccCCCCeEEE
Confidence 888877899999 999999999999999999 889999875 11 24789999999994 799999999
Q ss_pred e-ecCCcEEEEEcC----CCCcccCCCc-----------------hhhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCcc
Q 007779 188 A-DPEGSIMGGGGS----IGPHYSGNDP-----------------REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQV 245 (590)
Q Consensus 188 a-~~~g~im~~~h~----~gvQfHPEs~-----------------~~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~ 245 (590)
| ++||.|||++|+ ||||||||+. .++.++++|+++.+|++||+|||+++|+.||
T Consensus 146 A~s~d~~i~a~~~~~~pi~GvQFHPE~~~t~~g~~i~~nFl~~~~~~~~~~~~i~~l~~g~~Lt~~ea~~~~~~il---- 221 (534)
T PRK14607 146 AKSDDGEIMGIRHKEHPIFGVQFHPESILTEEGKRILKNFLNYQREEIDIKSYLKKLVEGEDLSFEEAEDVMEDIT---- 221 (534)
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCCCCCChhHHHHHHHHHHHhhccCCHHHHHHHhccCCCCCHHHHHHHHHHHH----
Confidence 9 889999999997 9999999972 1345788999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCCccccchHHHHHHHhcCCC
Q 007779 246 DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGE 325 (590)
Q Consensus 246 ~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv 325 (590)
+|+++|+|+||||++||+||||+|||+||++||++++.+++.+..+.+|+|||||||++|||+||+ +|+++|++|+
T Consensus 222 ---~g~~~~~q~~AfL~alr~kget~~El~g~~~a~~~~~~~~~~~~~~~~D~~gtggdg~~t~nist~-~a~v~A~~G~ 297 (534)
T PRK14607 222 ---DGNATDAQIAGFLTALRMKGETADELAGFASVMREKSRHIPAPSPRTVDTCGTGGDGFGTFNISTT-SAFVVAAAGV 297 (534)
T ss_pred ---cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCCCCCCceEEccCCCCCCCccccHHH-HHHHHHhCCC
Confidence 999999999999999999999999999999999999987765433479999999999999999998 9999999999
Q ss_pred cEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchh
Q 007779 326 SCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEK 405 (590)
Q Consensus 326 ~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k 405 (590)
||+|||||++||++|| +|+||+||+++++++++++++|++ .||+|+++|.|||+|++++++|++||+||++++..+
T Consensus 298 ~V~kHG~r~~ss~~Gs--advle~lGv~~~~~~~~~~~~l~~--~g~~fl~ap~~~p~l~~~~~~R~~Lg~rTifN~lgp 373 (534)
T PRK14607 298 PVAKHGNRAVSSKSGS--ADVLEALGVKLEMTPEEAASVLRE--TGFSFLFAPLFHPAMKHAAPARRELGIRTAFNLLGP 373 (534)
T ss_pred cEEEECCCCCCCCccH--HHHHHHcCCCCCCCHHHHHHHHHH--hCcEEeeccccCHHHHHHHHHHHHhCCCcHHHhHHh
Confidence 9999999999999999 999999999999999999999999 677778899999999999999999999999887765
Q ss_pred hhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeE
Q 007779 406 VQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTF 485 (590)
Q Consensus 406 ~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~ 485 (590)
++||+++++||+|||||+|.++|+++++.+|.++++||||.||+||+++.+ +|.++
T Consensus 374 ---L~NP~~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~~~vv~G~~G~dE~s~~~---------------------~t~v~ 429 (534)
T PRK14607 374 ---LTNPARVKYQIVGVFDPSYAEPLAQALQRLGTERAMVVSGIDGYDEISTCG---------------------PTQIL 429 (534)
T ss_pred ---ccCCCCCCcEEEeeCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCccccCCC---------------------ceEEE
Confidence 478999999999999999999999999999999999999999999998653 35555
Q ss_pred e-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCCC-CchhHHHHHHHHHHHHHhcCCCCCCHHHH
Q 007779 486 E-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGEK-GPTYDRIVLNAGMVDHLLGCDGAEDVSVA 562 (590)
Q Consensus 486 ~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~~-~~~~d~v~lNAa~~L~l~g~g~a~s~~eg 562 (590)
+ .+|++.+ ++|+|++||++..+++++ ++++++|+++++++|+|+. ++.+|.|++|||++||++| +++|++||
T Consensus 430 ~~~~g~i~~---~~i~p~~~Gl~~~~~~~~~~~~~~~na~~~~~vl~G~~~~~~~~~v~lnaA~~L~~~g--~~~s~~eg 504 (534)
T PRK14607 430 ELEDGEIVT---YTFDPEELGLKRVDPEELKGGDPQENYRLAEDVLKGEPRRPQRDAVALNAGAALYLVG--EADSIKEG 504 (534)
T ss_pred EEcCCEEEE---EEEcHHHCCCCCCCHHHcCCCCHHHHHHHHHHHHCCCCCChHHHHHHHHHHHHHHHcC--CCCCHHHH
Confidence 4 4776654 999999999999888775 6799999999999999994 7899999999999999986 78999999
Q ss_pred HHHHHHHHHchHHHHHHHHHHHHhccC
Q 007779 563 MDRAREAIDSGKALKRLLNYIKISHKL 589 (590)
Q Consensus 563 ~~~A~e~i~SG~A~~~L~~~~~~~~~~ 589 (590)
+++|+++|+||+|+++|++|+++++++
T Consensus 505 ~~~a~~~i~sG~a~~~l~~~~~~~~~~ 531 (534)
T PRK14607 505 VGKALDLIDDGRAYKKLEEVMDLSKTL 531 (534)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998865
|
|
| >COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-82 Score=661.29 Aligned_cols=335 Identities=27% Similarity=0.355 Sum_probs=310.3
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|.++.+|+++.+|++|+++||+++|+.|| +|+++|+|+||||+|||+||||++||+||++||++++.+++.+.
T Consensus 2 ~~~~~~l~kl~~g~~L~~~eA~~l~~~il-------~g~~~~~qi~A~L~Alr~Kget~eEi~G~~~am~~~~~~~~~p~ 74 (338)
T COG0547 2 MDLRKILKKLGRGRDLDREEARELFKAIL-------SGEASPAQIGAFLTALRIKGETPEEIAGFAEAMREHAPKLPVPA 74 (338)
T ss_pred chHHHHHHHHHcCCCCCHHHHHHHHHHHh-------cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcccCCCCC
Confidence 45889999999999999999999999999 99999999999999999999999999999999999887777655
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCce
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf 372 (590)
...+|+|||||||.+|||+||+ +|+|+|++|+||+|||||++|||+|| +|+||+|||+++++|++++++|++ .||
T Consensus 75 ~~~vDi~GTGGDg~~T~NiSt~-aA~v~A~~Gv~VaKHGnrs~sSksGs--aDvleaLGv~l~~~~e~~~~~l~~--~g~ 149 (338)
T COG0547 75 ADPVDIVGTGGDGANTINISTA-AAIVAAAAGVPVAKHGNRSVSSKSGS--ADVLEALGVNLELSPEQAARALEE--TGI 149 (338)
T ss_pred CCCCCeecCCCCCCCcccchHH-HHHHHHhCCCcEEeECCCCCCCCCcH--HHHHHHcCCCCCCCHHHHHHHHHh--cCe
Confidence 4448999999999999999999 99999999999999999999999999 999999999999999999999999 566
Q ss_pred EeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCc
Q 007779 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA 452 (590)
Q Consensus 373 ~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~ 452 (590)
+|+|+|.|||+|++++++|++||+||++|....+ +||+++++||+|||||+|.+++|++++++|.++++||||.||+
T Consensus 150 ~FlfAp~~hp~~k~v~~vR~~LG~RTifN~LGPL---~NPa~~~~qliGV~~p~~~~~~A~~l~~LG~~ralvV~G~~Gl 226 (338)
T COG0547 150 GFLFAPAYHPAMKHVAPVRKELGVRTIFNLLGPL---LNPARAKLQLIGVYHPELVELLAEALRLLGVERALVVHGLEGL 226 (338)
T ss_pred EEEEccccCHHHHHHHHHHHHcCCCchHHhhccc---cCCCCCCceEEEEeCHHHHHHHHHHHHHhCcceEEEEECCCCc
Confidence 6677999999999999999999999977776553 6777888999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHC
Q 007779 453 LSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALR 530 (590)
Q Consensus 453 ~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~ 530 (590)
||+++.+ .|.|++ .+|++++ |+++|+|||+++.+++++ ++++++|+++++++|+
T Consensus 227 DE~~~~~---------------------~t~v~~l~~g~i~~---~~l~pe~~Gl~~~~~~~l~~~~~~ena~~~~~vL~ 282 (338)
T COG0547 227 DEVTPTG---------------------TTLVAELKDGEIRE---YTLTPEDFGLERAPLEDLPGGDPEENAEILRAVLA 282 (338)
T ss_pred ccccCCC---------------------CceEEEEcCCceEE---EEeCHHhcCCCCCchhhcCCCCHHHHHHHHHHHHC
Confidence 9998653 366665 4677764 999999999999888876 5799999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 531 GEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 531 G~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
|++++.+|+|++|||++||+.| +++|++||+++|+++|+||+|+++|++++.+++.
T Consensus 283 G~~~~~~d~v~~Naa~~L~~~g--~a~~l~eg~~~A~~~i~sG~a~~~l~~l~~~~~~ 338 (338)
T COG0547 283 GEEGPARDAVALNAAAALYAAG--KAESLKEGIALALEAIDSGAALEKLEELVAFSKS 338 (338)
T ss_pred CCCcchHHHHHHHHHHHHHHcC--ccCCHHHHHHHHHHHHhCcHHHHHHHHHHHHhcC
Confidence 9889999999999999999986 7999999999999999999999999999999863
|
|
| >PLN02641 anthranilate phosphoribosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-79 Score=643.94 Aligned_cols=332 Identities=23% Similarity=0.297 Sum_probs=307.4
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCCC
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVK 294 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~~ 294 (590)
++++|+++.+|++||+||++++|+.|| +| ++|.|+||||++||+||||+|||+||++||++++.+++.. ..
T Consensus 4 ~~~~l~~l~~g~~Lt~eEa~~~~~~il-------~~-~~~~qigAfL~alr~kget~eEiag~~~a~~~~~~~~~~~-~~ 74 (343)
T PLN02641 4 FRQLIESLIQGTDLTEEEAEAALDFLL-------DD-ADEAQISAFLVLLRAKGETFEEIAGLARAMIKRARKVDGL-VD 74 (343)
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHH-------cC-CCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCC-CC
Confidence 688999999999999999999999999 88 9999999999999999999999999999999998766532 34
Q ss_pred CceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEe
Q 007779 295 SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAY 374 (590)
Q Consensus 295 ~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~f 374 (590)
.+|||||||||++|||+||+ +|+|+|++|+||+|||||++||++|| +|+||+|||++++++++++++|++ .||+|
T Consensus 75 ~~D~~gtGGdg~~t~nist~-aa~v~A~~G~~V~kHGnr~~ss~~Gs--aDvLeaLGi~~~~~~~~~~~~l~~--~g~~f 149 (343)
T PLN02641 75 AVDIVGTGGDGANTVNISTG-SSILAAACGAKVAKQGNRSSSSACGS--ADVLEALGVAIDLGPEGVKRCVEE--VGIGF 149 (343)
T ss_pred CCceeCCCCCCCCccccHHH-HHHHHHhCCCeEEEeCCCCCCCccCH--HHHHHHcCCCCCCCHHHHHHHHHh--cCcEE
Confidence 79999999999999999998 99999999999999999999999999 999999999999999999999999 56666
Q ss_pred ecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccc
Q 007779 375 VSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALS 454 (590)
Q Consensus 375 l~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~e 454 (590)
+++|.|||+|++++++|++||+||++|+..++ +||+++++||+|||||+|.++|+++++.+|.++++|||| +|+||
T Consensus 150 l~a~~~hPa~~~~~~~R~~LG~RT~fN~lgpL---~NPa~~~~~v~GV~~~~~~~~~a~al~~lG~~~alVv~G-~G~DE 225 (343)
T PLN02641 150 MMAPKYHPAMKIVAPVRKKLKVKTVFNILGPM---LNPARVPHAVVGVYHESLVEKMAKALQRFGMKRALVVHS-EGLDE 225 (343)
T ss_pred EechhhCHHHHHHHHHHHHhCCCcHHHHHHHh---cCCCCCCceEEeeeCHHHHHHHHHHHHHcCCCeEEEEec-CCCCc
Confidence 77999999999999999999999999887764 799999999999999999999999999999999999999 79999
Q ss_pred cccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCC
Q 007779 455 MTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGE 532 (590)
Q Consensus 455 ls~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~ 532 (590)
+++.+ +|++++ .+|.+++ |+|+|+|||+++++++++ ++++++|+++++++|+|+
T Consensus 226 is~~g---------------------~t~v~~~~~g~i~~---~~~~p~d~Gl~~~~~~~l~~~~~~~na~~~~~vL~G~ 281 (343)
T PLN02641 226 MSPLG---------------------PGDVLEVTPEKIEE---FSFDPLDFGIPRCTLEDLRGGDPDYNAKVLRDVLSGE 281 (343)
T ss_pred cccCc---------------------ceEEEEEeCCceEE---EEeCHHHcCCCcCCHHhcCCCCHHHHHHHHHHHHCCC
Confidence 98654 355654 4676654 999999999999988876 679999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhccCC
Q 007779 533 KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590 (590)
Q Consensus 533 ~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~~~ 590 (590)
+++++|.|++|||++||++| +++|++||+++|+++|+||+|+++|++|++++++++
T Consensus 282 ~~~~~d~v~lNaa~~L~~~g--~~~sl~eg~~~A~~~i~sG~a~~~l~~~~~~~~~~~ 337 (343)
T PLN02641 282 KGAIADALILNAAAALLVSG--LAKTLAEGVALARETQESGKAIKTLDSWIKISQELK 337 (343)
T ss_pred CcchHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhh
Confidence 88899999999999999986 789999999999999999999999999999988763
|
|
| >PRK07394 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-78 Score=636.02 Aligned_cols=329 Identities=29% Similarity=0.396 Sum_probs=301.0
Q ss_pred HHHHHHHHhhcCC----CCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCC
Q 007779 214 RLVGALREVLAGG----HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPP 289 (590)
Q Consensus 214 ~L~~~L~kl~~G~----~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~ 289 (590)
+++++|+++.+|+ +||+|||+++|+.|| +|+++|+|+||||++||+||||+|||+||++||++++.+++
T Consensus 4 ~~~~~i~~l~~g~~~~~~Lt~eea~~~~~~il-------~g~~~~~q~aAfL~alr~KGET~eEiaG~~~a~~~~~~~~~ 76 (342)
T PRK07394 4 RFRELLKKVGSGEHTSKDLTREEAADALKLML-------LGEATPAQIGAFLIAHRIKRPTPEELAGMLDTYDELGPKLQ 76 (342)
T ss_pred HHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCCC
Confidence 4789999999996 999999999999999 99999999999999999999999999999999999987765
Q ss_pred CCCC-CCceEEccCCCCC-CccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCC-CHHHHHHHHH
Q 007779 290 VADV-KSLTHYGEPYDGN-TRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNL-SVLQAKELLE 366 (590)
Q Consensus 290 ~~~~-~~vD~~GtGgDG~-~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~-s~e~a~~~Le 366 (590)
.+.. ..+|+|||||||+ +|||+||+ +|+++|++|+||+|||||++|||+|.|.+|+||+|||+++. +++++.++|+
T Consensus 77 ~~~~~~~~d~~GtggDG~~~t~NiSt~-aA~v~A~~Gv~V~kHGnr~~ssk~GvtsaDvLe~LGv~~~~~~~~~~~~~l~ 155 (342)
T PRK07394 77 SPSNQRPPIVFGMPYDGRSRTAPIYPL-TALILAAAGQPVVLHGGDRMPTKYGVPLVELWQGLGVDLTGLSLEQVQEGFE 155 (342)
T ss_pred CCCCCCceeEEeCCCCCCCCCcccHHH-HHHHHHHCCCeEEEECCCCCCCCCCchHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 4322 3689999999996 89999998 99999999999999999999999995559999999999998 9999999999
Q ss_pred hccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhc-cCCceEEEEecCCcchHHHHHHHHHcCCceEEE
Q 007779 367 DEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA-QGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLV 445 (590)
Q Consensus 367 ~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP-~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alV 445 (590)
+ .||+|+++|.|||+|++++++|++||+||++|+..++ +|| +++++||+||||++|.++|+++++.+|.++++|
T Consensus 156 ~--~g~~Fl~ap~~hP~m~~~~~vR~~Lg~RT~fN~lgpL---~NP~a~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~~~v 230 (342)
T PRK07394 156 Q--TGLAFIYQPDHFPLAESLIPYRDEIGKRPPLATLELI---WTPHQGDHHLVSGFVHPPTEARAWEALELRGETNFTT 230 (342)
T ss_pred H--cCceeeechhhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCCCCCCceEEEeeCHHHHHHHHHHHHHcCCCeEEE
Confidence 9 6777788999999999999999999999999888764 789 578899999999999999999999999999999
Q ss_pred EecCCCccccccccccccccCCCCccccccccccCcceeEec-CCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHH
Q 007779 446 VKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEG-DGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIEL 524 (590)
Q Consensus 446 V~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~-~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~ 524 (590)
|||.||+||+++.. +|.+++. +|++.+ ++|+|+|||+++.+++ ++++++|+++
T Consensus 231 v~G~~G~dE~s~~~---------------------~t~v~~~~~g~i~~---~~i~p~d~G~~~~~l~--~~~~~~na~~ 284 (342)
T PRK07394 231 VKGLEGSCDLPISR---------------------TAIIGRVQNGHFER---LILHPRDYGCGGKDVP--WESTEEWLEQ 284 (342)
T ss_pred EEcCCCceeccCCC---------------------CeEEEEEcCCeEEE---EEECHHHcCCCcccCC--CCCHHHHHHH
Confidence 99999999997542 3556554 676654 8999999999987552 5799999999
Q ss_pred HHHHHCCCCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHH
Q 007779 525 GLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYI 583 (590)
Q Consensus 525 ~~~vL~G~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~ 583 (590)
++++|+|++++.+|.|++|||++||++| +++|++||+++|+++|+||+|+++|++|+
T Consensus 285 ~~~vl~G~~~~~~~~v~lNaa~~L~~~g--~~~s~~eg~~~A~~~i~sG~a~~~l~~~~ 341 (342)
T PRK07394 285 AQAALNGEPGPLTQALIWNGGFYLWRAG--ISSSLEEGIEKAEELLNSGKALQKLQQLI 341 (342)
T ss_pred HHHHHCCCCcchhHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHcCHHHHHHHHHh
Confidence 9999999988899999999999999986 78999999999999999999999999997
|
|
| >PRK00188 trpD anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=608.94 Aligned_cols=335 Identities=25% Similarity=0.366 Sum_probs=309.8
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|.++++|+++..|++||+|||+++|+.|+ +|+++|+|+||||++||+||||+|||+||++||+++..++++++
T Consensus 1 ~~~~~~i~~l~~g~~Lt~~Ea~~~~~~il-------~g~~~~~q~~AfL~alr~kget~~El~g~~~a~~~~~~~~~~~~ 73 (339)
T PRK00188 1 MTMKELLEKLVEGEDLSEEEAEELMDAIM-------SGEATPAQIAAFLTALRVKGETVDEIAGAARAMREHAVPVPDPD 73 (339)
T ss_pred CCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCCCC
Confidence 56789999999999999999999999999 99999999999999999999999999999999999998776543
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCce
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf 372 (590)
+.+|+|||||||+++||+||+ +|+++|++|+||+|||||++||++|| +|+||+||++++.++++++++|++ .||
T Consensus 74 -~~iDi~gtggdg~~t~nis~~-~a~vlA~~G~~V~kHG~~~~~s~~Gs--advLe~lGi~~~~~~~~~~~~l~~--~g~ 147 (339)
T PRK00188 74 -DAVDIVGTGGDGANTFNISTA-AAFVAAAAGVKVAKHGNRSVSSKSGS--ADVLEALGVNLDLSPEQVARCLEE--VGI 147 (339)
T ss_pred -CCCcccCCCCCCCCccchHHH-HHHHHHhCCCEEEEECCCCCCCCcCH--HHHHHHcCCCCCCCHHHHHHHHHH--cCc
Confidence 479999999999999999998 99999999999999999999999999 999999999999999999999999 677
Q ss_pred EeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCc
Q 007779 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA 452 (590)
Q Consensus 373 ~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~ 452 (590)
+|+++|.|||+|++++++|++||+||++|+.+++ +||++++++|+|||||+|.++|+++++.+|.++++||||.||+
T Consensus 148 ~fl~a~~~~P~l~~l~~lR~~Lg~Rt~fN~l~~L---~NP~~~~~~v~Gv~h~~~~~~~a~~l~~lg~~~~~vv~G~~G~ 224 (339)
T PRK00188 148 GFLFAPLYHPAMKHVAPVRKELGIRTIFNLLGPL---TNPARPKRQLIGVYSPDLLEPMAEVLKRLGSKRALVVHGSDGL 224 (339)
T ss_pred EEeeCcccCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCCCCCCEEEeecCHHHHHHHHHHHHHhCCCeEEEEECCCCc
Confidence 7788999999999999999999999999999875 8999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHC
Q 007779 453 LSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALR 530 (590)
Q Consensus 453 ~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~ 530 (590)
+|+++.. +|.++. .+|++. +++|+|++||++..+.+++ ++++++|+++++++|+
T Consensus 225 dE~~~~~---------------------~t~v~~~~~g~~~---~~~i~p~~~Gl~~~~~~~~~~~~~~~~a~~~~~vl~ 280 (339)
T PRK00188 225 DEISLTG---------------------PTTVAELKDGEIR---EYTLTPEDFGLPRAPLEDLRGGDPEENAAILRAVLQ 280 (339)
T ss_pred eeecCCC---------------------CEEEEEEcCCEEE---EEEECHHHcCCCcCCHHhcCCCCHHHHHHHHHHHHC
Confidence 9998653 355554 367654 3899999999998876554 5799999999999999
Q ss_pred CC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhccC
Q 007779 531 GE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589 (590)
Q Consensus 531 G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~~ 589 (590)
|+ .+++++.+++|||++||++| .++|++||+++|+++|+||+|+++|++|++.+++.
T Consensus 281 G~~~~~~~~~v~lnaA~~L~~~g--~~~s~~e~~~~A~~~i~sG~a~~~l~~~~~~~~~~ 338 (339)
T PRK00188 281 GKGPGAARDAVLLNAAAALYVAG--KADDLKEGVELAREAIDSGAALAKLEELVAFSQEL 338 (339)
T ss_pred CCCCCchHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhccC
Confidence 96 67899999999999999986 68999999999999999999999999999998753
|
|
| >TIGR01245 trpD anthranilate phosphoribosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=601.52 Aligned_cols=326 Identities=23% Similarity=0.322 Sum_probs=300.8
Q ss_pred HHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCC-CCCCce
Q 007779 219 LREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA-DVKSLT 297 (590)
Q Consensus 219 L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~-~~~~vD 297 (590)
|+++.+|++||++||+++|+.|| +|+++|.|+||||++||+||||+||++||++||+++..+++++ ....+|
T Consensus 1 l~~~~~~~~Lt~eEa~~~~~~il-------~g~~~~~q~~AfL~alr~kget~~Elag~~~a~~~~~~~~~~~~~~~~iD 73 (330)
T TIGR01245 1 LEKLIDGKDLSRDEAEQLMKEIM-------SGEASPAQIAAILAALRIKGETPEEITGFAKAMREHAVKVPGRPVEDLVD 73 (330)
T ss_pred CchhhcCCCcCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCCccCCCccc
Confidence 46788999999999999999999 9999999999999999999999999999999999999877653 345799
Q ss_pred EEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEeecc
Q 007779 298 HYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSL 377 (590)
Q Consensus 298 ~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~fl~a 377 (590)
+|||||||++|||+||+ +|+++|++|+||+|||||++||++|+ +|+||+|||+++.++++++++|++ .||+|+++
T Consensus 74 ~~gtggdg~~t~nist~-~a~vlA~~G~~V~kHG~r~~~s~~Gs--~d~le~LGi~~~~s~~~~~~~l~~--~g~~f~~~ 148 (330)
T TIGR01245 74 IVGTGGDGANTINISTA-SAFVAAAAGVKVAKHGNRSVSSKSGS--ADVLEALGVNLDLGPEKVARSLEE--TGIGFLFA 148 (330)
T ss_pred ccCCCCCCCCccccHHH-HHHHHHhCCCEEEEeCCCCCCCCccH--HHHHHHcCCCCCCCHHHHHHHHHH--hCcEEeec
Confidence 99999999999999998 99999999999999999999999999 999999999999999999999999 67777889
Q ss_pred hhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCcccccc
Q 007779 378 REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTT 457 (590)
Q Consensus 378 ~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els~ 457 (590)
|.|||+|++++++|++||+||++|+.+++ +||++++++|+|||||+|.++|+++++.+|.++++||||.||++|+++
T Consensus 149 ~~~~P~~~~l~~lR~~lg~rT~~N~lgpL---~NP~~~~~~v~Gv~~~~~~~~~a~~~~~lg~~~~~vv~G~~G~dE~s~ 225 (330)
T TIGR01245 149 PLYHPAMKHVAPVRRELGVRTVFNLLGPL---TNPARPKYQVIGVYDPDLVEVMAEALKNLGVKRALVVHGDDGLDEISL 225 (330)
T ss_pred hhhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCCCCCCEEEcccCHHHHHHHHHHHHHhCCCeEEEEECCCCceeecC
Confidence 99999999999999999999999997764 799999999999999999999999999999999999999999999986
Q ss_pred ccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCCC-C
Q 007779 458 RLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGEK-G 534 (590)
Q Consensus 458 ~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~~-~ 534 (590)
.+ +|.+++ .+|++.+ ++|+|+|||++..+++++ ++++++|+++++++|+|+. +
T Consensus 226 ~~---------------------~t~v~~~~~g~~~~---~~i~p~~~g~~~~~~~~~~~~~~~~~a~~~~~~l~G~~~~ 281 (330)
T TIGR01245 226 TG---------------------PTTVAELKDGEIRE---YTLDPEDFGLPRAPLEELAGGSPEENAEILRDILRGKGSG 281 (330)
T ss_pred CC---------------------cEEEEEEECCEEEE---EeCCHHHcCCCcCCHhhcCCCCHHHHHHHHHHHHCCCCCC
Confidence 53 355554 4776654 899999999998877664 6789999999999999994 7
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHH
Q 007779 535 PTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKI 585 (590)
Q Consensus 535 ~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~ 585 (590)
+++|.|++|||++||++| +++|++||+++|+++|+||+|+++|++|+++
T Consensus 282 ~~~~~v~lnaA~~L~~~g--~~~s~~e~~~~a~~~i~sG~a~~~l~~~~~~ 330 (330)
T TIGR01245 282 AKRDIVALNAAAALYVAG--RASDLKEGVELALEAIDSGAAAEKLEELVAF 330 (330)
T ss_pred cHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHhC
Confidence 899999999999999986 7899999999999999999999999999874
|
In many widely different species, including E. coli, Thermotoga maritima, and Archaeoglobus fulgidus, this enzymatic domain (anthranilate phosphoribosyltransferase) is found C-terminal to glutamine amidotransferase; the fusion protein is designated anthranilate synthase component II (EC 4.1.3.27) |
| >PRK08136 glycosyl transferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-71 Score=575.00 Aligned_cols=306 Identities=19% Similarity=0.225 Sum_probs=278.5
Q ss_pred hHHHHHHHHhhcC----CCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCC
Q 007779 213 MRLVGALREVLAG----GHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP 288 (590)
Q Consensus 213 m~L~~~L~kl~~G----~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~ 288 (590)
|.|.++|+++.+| ++||+|||+++|+.|| +|+++|+|+||||++||+||||+|||+||++||++++.++
T Consensus 1 ~~~~~~i~~l~~G~~~~~~Lt~eEA~~~~~~il-------~g~~~~~qi~AfL~alr~KgET~eElaG~~~a~~~~~~~~ 73 (317)
T PRK08136 1 MDYAKIIKEIGRGKNGARDLDRDTARALYGAML-------DGRVPDLELGAILIALRIKGESEAEMLGFLDAMQAHTIPL 73 (317)
T ss_pred CCHHHHHHHHHCCCCCCCCcCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcC
Confidence 5688999999999 8999999999999999 9999999999999999999999999999999999999877
Q ss_pred CCCC-C-CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHH
Q 007779 289 PVAD-V-KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLE 366 (590)
Q Consensus 289 ~~~~-~-~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le 366 (590)
+.+. . ..+||||||||++ |+|+||+ +|+|+|++|+||+|||||++|||+|| +|+||+|||+++++|++++++|+
T Consensus 74 ~~~~~~~~~iD~~gtgGd~~-t~nist~-aA~vlA~~G~~V~kHGnr~vssk~gs--advleaLGi~~~~~~~~~~~~l~ 149 (317)
T PRK08136 74 TPPAGRPMPVVIPSYNGARK-QANLTPL-LALLLAREGVPVLVHGVSEDPTRVTS--AEIFEALGIPPTLHADQAQAKLA 149 (317)
T ss_pred CCCCCCCceEEeCCCCCCCC-CcChHHH-HHHHHHHCCCeEEEECCCCCCCcccH--HHHHHHcCCCCCCCHHHHHHHHH
Confidence 5432 2 3699999999975 9999998 99999999999999999999999999 99999999999999999999999
Q ss_pred hccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhc--cCCceEEEEecCCcchHHHHHHHHHcCCceEE
Q 007779 367 DEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--QGREAIVAGFYHEGYEEPLLMLMKRRGVHSGL 444 (590)
Q Consensus 367 ~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP--~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~al 444 (590)
+ .||+|+++|.|||+|++++++|++||+||++|+.+++ +|| +++++||+|||||+|.++|+++++++|. +++
T Consensus 150 ~--~g~~fl~ap~~hPa~~~~~~vR~~LG~RT~fN~lgpL---~NP~~a~~~~~v~Gv~~~~~~~~~a~~l~~lg~-~al 223 (317)
T PRK08136 150 E--GQPAFIPVGVLCPPLARLLALRWRMGVRNSAHTLAKL---ATPFAEGAALRLSSYTHPEYRDRLAEFFSDIGA-RAL 223 (317)
T ss_pred h--cCeEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCccccCCCeEEEeeeChHHHHHHHHHHHHcCC-CEE
Confidence 9 6777788999999999999999999999999998875 799 6899999999999999999999999998 999
Q ss_pred EEecCCCccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCc-cCCCHHHHH
Q 007779 445 VVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPR-ADRSVSKNI 522 (590)
Q Consensus 445 VV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~-~~~~~~~na 522 (590)
||||.||+||+++.. +|.+++ .+|+++ ++++|++||++..+ +- .++++++|+
T Consensus 224 vv~G~~G~dE~s~~~---------------------~t~v~~~~~g~~~----~~~~p~~~g~~~~~-~~~~~~~~~~na 277 (317)
T PRK08136 224 LMRGTEGEVYANPRR---------------------CPQIDWIHDGGCR----VLVERQSGSADEPP-ELPAAKDAATTA 277 (317)
T ss_pred EEEcCCCceeecCCC---------------------CceEEEEeCCEEE----EEECHHHcCCccCc-hhccCCCHHHHH
Confidence 999999999998653 355654 366542 78999999999876 33 267999999
Q ss_pred HHHHHHHCCCCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHH
Q 007779 523 ELGLAALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMD 564 (590)
Q Consensus 523 ~~~~~vL~G~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~ 564 (590)
+++++||+|+ ++.+|.|++|||++||++| +++|+++|++
T Consensus 278 ~~~~~vL~G~-~~~~d~v~lNaa~~l~~~g--~~~~~~~g~~ 316 (317)
T PRK08136 278 AWIERVLAGE-VPVPESIARQVACCLVAAG--EAATIEDGLA 316 (317)
T ss_pred HHHHHHHCCC-CCcchHHHHHHHHHHHHcC--ccCCHHHhhc
Confidence 9999999995 5778999999999999986 7899999986
|
|
| >PRK09071 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-68 Score=556.68 Aligned_cols=308 Identities=23% Similarity=0.308 Sum_probs=277.2
Q ss_pred hHHHHHHHHhhcCC----CCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCC
Q 007779 213 MRLVGALREVLAGG----HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP 288 (590)
Q Consensus 213 m~L~~~L~kl~~G~----~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~ 288 (590)
|+++.+|+++++|+ +||+|||+++|+.|| +|+++|+|+||||++||+||||+|||+||++||++++.++
T Consensus 2 ~~~~~~ik~vg~gk~~~~~Lt~eEa~~~~~~il-------~g~~~~~q~aAfL~alr~kgeT~eEi~g~~~a~r~~~~~~ 74 (323)
T PRK09071 2 HPFAEYIRILGKGKRGRRSLTREEARQAMGMIL-------DGEVEDDQLGAFLMLLRVKEETAEELAGFVEAIRERLQAP 74 (323)
T ss_pred CcHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccC
Confidence 46899999999998 999999999999999 9999999999999999999999999999999999999776
Q ss_pred CCCCCCCceE-EccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCC-CCHHHHHHhcCCCCCCCHHHHHHHHH
Q 007779 289 PVADVKSLTH-YGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGG-VTEEQMLKFMGASTNLSVLQAKELLE 366 (590)
Q Consensus 289 ~~~~~~~vD~-~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~G-st~aDvLeaLGi~i~~s~e~a~~~Le 366 (590)
+.+ ..+|| ||||+|+..++| |+ +|+++|++|+||+|||||++||++| | +|+||+|||+++.++++++++|+
T Consensus 75 ~~~--~~iD~~~gtG~d~~~~~~--~~-~a~vlA~~G~~V~kHGnr~~ssk~g~s--aDvLeaLGv~~~~~~~~~~~~l~ 147 (323)
T PRK09071 75 PLA--VDLDWPSYAGKRRHLPWY--LL-AAKLLAQNGYRVLLHGGGGHTAGRLYT--EQLLEALGIPIARSWQEAEQALE 147 (323)
T ss_pred CCC--CceecCCcCCCCCCcccH--HH-HHHHHHHCCCeEEEECCCCCCCCcccH--HHHHHHCCCCCCCCHHHHHHHHH
Confidence 532 35899 999999888776 44 9999999999999999999999997 7 99999999999999999999999
Q ss_pred hccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEE
Q 007779 367 DEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVV 446 (590)
Q Consensus 367 ~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV 446 (590)
+ .||+|+++|.|||+|++++++|++||+||++|+..++ +||+++++||+||||++|.++|+++++.+|.++++||
T Consensus 148 ~--~g~~fl~ap~~hPa~~~~~~~R~~lg~RT~fN~lgpL---~NPa~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~alvv 222 (323)
T PRK09071 148 E--HNIAYLPLEDFAPQLQRMIDLRNTLGLRSPINTLARL---LNPLNAKASLQGIFHPGYQQLHREAARLLGDQNALVF 222 (323)
T ss_pred h--cCeEEeehHHhChHHHHHHHHHHHhCCCCHHHHHHHH---cCcCCCCceEEeeEChhHHHHHHHHHHHcCCCeEEEE
Confidence 9 6777788999999999999999999999999988764 7999999999999999999999999999999999999
Q ss_pred ecCCCccccccccccccccCCCCccccccccccCcceeEec-CCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHHH
Q 007779 447 KGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEG-DGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELG 525 (590)
Q Consensus 447 ~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~-~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~~ 525 (590)
||.||+||+++.+ +|.+++. +|++.+ ++++ +||++..++ ++++|++++
T Consensus 223 ~G~~G~dE~s~~~---------------------~t~v~~~~~g~i~~---~~~~--~~g~~~~~~-----~~~~na~~~ 271 (323)
T PRK09071 223 KGEGGESERNPDV---------------------STTLYGSRNGEAWD---EEWP--ALSEERHVK-----PEELDPEQL 271 (323)
T ss_pred ECCCCceeecCCC---------------------ceEEEEEcCCeEEE---EEec--ccccccCCC-----CcccCHHHH
Confidence 9999999998653 3566654 666653 6774 588876643 789999999
Q ss_pred HHHHCCCCC-c-hhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHch
Q 007779 526 LAALRGEKG-P-TYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSG 573 (590)
Q Consensus 526 ~~vL~G~~~-~-~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG 573 (590)
++||+|+.+ + ..|+|++|||++|| .| +++|++||+++|+++|+.+
T Consensus 272 ~~vl~G~~~~~~~~d~v~~Naa~aL~-~g--~~~sl~eg~~~A~~~w~~r 318 (323)
T PRK09071 272 LAVWRGEEEDEYGENAVIATMALALW-RG--LNQSREEAFEKAAQLWATR 318 (323)
T ss_pred HHHhCCCCCchHHHHHHHHHHHHHHH-cC--CCCCHHHHHHHHHHHHHHh
Confidence 999999843 3 56999999999999 65 7899999999999999865
|
|
| >PF00591 Glycos_transf_3: Glycosyl transferase family, a/b domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR000312 The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-57 Score=461.12 Aligned_cols=248 Identities=27% Similarity=0.389 Sum_probs=221.9
Q ss_pred CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceE
Q 007779 294 KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFA 373 (590)
Q Consensus 294 ~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~ 373 (590)
++||+|||||||.+|||+||+ +|+++|++|+||+|||||++|+++|| +|+||+||+++++++++++++|++ .||+
T Consensus 2 ~~~D~~gTGGd~~~t~niSt~-~a~vlAa~G~~V~kHG~r~~~~~~Gs--~dvLe~LGv~~~~~~~~~~~~l~~--~g~~ 76 (252)
T PF00591_consen 2 PVVDICGTGGDGDKTFNISTA-AAIVLAAAGVPVAKHGNRGVTSKSGS--ADVLEALGVPIDLSPEEAQAQLEE--TGIA 76 (252)
T ss_dssp TEEEEEESSCSSSTBHHHHHH-HHHHHHHTTSEEEEEEESGCTTSSSH--HHHHHHSTB-TT--HHHHHHHHHH--HSEE
T ss_pred CceEEecCCCCCCCceehHHH-HHHHHHccCCcEecccCCCccccccH--HHHHHhcCCCcCCCHHHHHHHhhc--cCeE
Confidence 478999999999999999998 99999999999999999999999999 999999999999999999999999 6777
Q ss_pred eecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCcc
Q 007779 374 YVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGAL 453 (590)
Q Consensus 374 fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~ 453 (590)
|+++|.|||+|++++++|++||+||++++.+++ +||+++++||+|||||+|.++|+++++.+|+++++|||| ||++
T Consensus 77 fl~~~~~~p~~~~l~~~R~~lg~rT~~N~l~pL---~nP~~~~~~v~Gv~~~~~~~~~~~~~~~lg~~~~~vv~G-~G~d 152 (252)
T PF00591_consen 77 FLFAPNFHPALKRLAPVRRELGIRTVFNTLGPL---LNPANAKHQVIGVFHPEYAELMAEALRDLGYGRALVVKG-EGSD 152 (252)
T ss_dssp EEEHHHHSGGHHHHHHHHHHHTS--SHHHHGHH---HHTT--SEEEEEHSCHHHHHHHHHHHCCETESEEEEEEE-TTBS
T ss_pred EecchhcCcchHHHHHHHHHcCCCCHHHhhhhh---cCCcCCCcEEEEEeCHHHHHHHHHHHHhCCCceEEEEec-CCcc
Confidence 788999999999999999999999999998765 799999999999999999999999999999999999999 9999
Q ss_pred ccccccccccccCCCCccccccccccCcceeEec-CCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCC
Q 007779 454 SMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEG-DGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRG 531 (590)
Q Consensus 454 els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~-~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G 531 (590)
|+++.. +|.+++. +|++. .++++|++||++..+.+++ .+++++|+++++++|+|
T Consensus 153 E~~~~~---------------------~t~v~~~~~g~~~---~~~l~p~d~gl~~~~~~~l~~~~~~e~~~~~~~~L~G 208 (252)
T PF00591_consen 153 EISPLG---------------------PTRVYELKNGEIT---EYELDPEDFGLKRAPLEELEGGDPEENARILRAVLAG 208 (252)
T ss_dssp SHHHSS---------------------HEEEEEHHTTEEE---EEEEEEGCCTSSSEEGGGGBHSSHHHHHHHHHHHHTT
T ss_pred hhhhcc---------------------CcEEEeecCCcee---EEecCHhhcCCCCCChHHhcCCCHHHHHHHHHhhhcC
Confidence 998643 3556543 67665 4999999999998887776 46899999999999999
Q ss_pred CCCch-hHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHH
Q 007779 532 EKGPT-YDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKAL 576 (590)
Q Consensus 532 ~~~~~-~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~ 576 (590)
+..+. +|.|++|||++||++| +++|++||+++|+++|+||+||
T Consensus 209 ~~~~~~~d~v~~nAa~~L~~~g--~~~s~~eg~~~a~e~i~sG~Al 252 (252)
T PF00591_consen 209 EEDPAHRDAVLLNAAAALYVAG--KASSLEEGVEKAREAIDSGKAL 252 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHTHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHcCCCC
Confidence 97665 9999999999999986 7899999999999999999997
|
4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1V8G_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 3H5Q_A 1KHD_A 1KGZ_B 1AZY_A 1OTP_A .... |
| >PRK06078 pyrimidine-nucleoside phosphorylase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-54 Score=466.30 Aligned_cols=302 Identities=19% Similarity=0.226 Sum_probs=261.1
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|++.++|+++.+|++||++|++++|+.|+ +|+++|.|++|||||+++||||.+|+++|++||++++.++++++
T Consensus 1 m~~~~iI~k~~~g~~Lt~eE~~~~~~~i~-------~g~~~d~qiaAfL~Al~~kG~t~~Ei~~lt~aM~~sg~~~~~~~ 73 (434)
T PRK06078 1 MRMVDLIQKKRDGKELTTEEINFFIEGYT-------NGTIPDYQMSALAMAIYFKDMTDRERADLTMAMVNSGDTIDLSA 73 (434)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcccCcc
Confidence 56789999999999999999999999999 99999999999999999999999999999999999999888753
Q ss_pred C--CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhcc
Q 007779 293 V--KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (590)
Q Consensus 293 ~--~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g 369 (590)
. +.+|+|||||||.+|||+ +|+++|+||++|+|||||+++|++|| +|+||+| |+++++++++++++|++
T Consensus 74 ~~~~~vD~~gTGGdG~kt~ni----~a~ivAA~Gv~VaKhgnR~lss~~GT--aD~LE~lpG~~~~ls~e~~~~~l~~-- 145 (434)
T PRK06078 74 IEGIKVDKHSTGGVGDTTTLV----LAPLVAAFGVPVAKMSGRGLGHTGGT--IDKLESIKGFHVEISQEDFIKLVNE-- 145 (434)
T ss_pred cCCCeeEecCCCCCCCCchHH----HHHHHHcCCCCeeeeCCCCcCCCcch--HHHHHhCCCCCCCCCHHHHHHHHHH--
Confidence 2 379999999999999994 78899999999999999999999999 9999999 99999999999999999
Q ss_pred CceEeec-chhhChHhHHHHhhhcccCCCC--CCCcchhhhhhhhccCCceEEEEec--------CCcchHHHHHHHHHc
Q 007779 370 IGFAYVS-LREARPSLYSLIGLREHIKKRP--PVATSEKVQQFVRAQGREAIVAGFY--------HEGYEEPLLMLMKRR 438 (590)
Q Consensus 370 ~gf~fl~-a~~~~Pal~~l~~vR~~Lg~Rt--PL~np~k~~~~lnP~~~~~~v~GV~--------h~~~~~~~a~~l~~l 438 (590)
.||+|++ +|.|||+|++++++|++++.-. ||.||.-+.+=+ .++++++|+||+ +++..+.+|++|..+
T Consensus 146 ~G~~fl~~a~~~~PAdk~v~~lR~v~~t~n~lPLi~~SImSKKl-Aag~~~~vldV~~G~gAfm~~~~~a~~lA~~l~~l 224 (434)
T PRK06078 146 NKVAVIGQSGNLTPADKKLYALRDVTATVNSIPLIASSIMSKKI-AAGADAIVLDVKTGAGAFMKTVEDAEELAHAMVRI 224 (434)
T ss_pred hCcEEEccCCCcChhhhhhHHHhccccccChHHhhhhHhhhhhh-hcCCCeEEEeeecCCCCCCCCHHHHHHHHHHHHHH
Confidence 5677787 5999999999999999999533 444441000000 177899999999 999999999999999
Q ss_pred CCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCccCCC
Q 007779 439 GVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRADRS 517 (590)
Q Consensus 439 G~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~ 517 (590)
|.+ .| . +.+++ .++ |++||+. .++
T Consensus 225 G~~-----~g---------~-----------------------~~~a~lt~~-----------~~plG~~-------iGn 249 (434)
T PRK06078 225 GNN-----VG---------R-----------------------NTMAVISDM-----------SQPLGRA-------IGN 249 (434)
T ss_pred HHh-----cC---------C-----------------------eEEEEECCC-----------Ccccccc-------CCC
Confidence 964 12 0 11111 122 6677762 468
Q ss_pred HHHHHHHHHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 518 VSKNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 518 ~~~na~~~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
+.|+++. +++|+|+ +++.+|.+++||+.+|++.| .+.++++|+++|+++|+||+|+++|++|+++|+.
T Consensus 250 a~Ev~Ea-~~vL~G~~~~~~~d~v~~~A~~~L~~~g--~~~~~~eg~~~a~e~l~sGkAl~kf~~~v~aqGg 318 (434)
T PRK06078 250 ALEVLEA-IDTLQGKGPKDLTELVLTLGSQMVVLAG--KAKTLEEAREHLIEVMNNGKALEKFKEFLSAQGG 318 (434)
T ss_pred HHHHHHH-HHHHCCCCcccHHHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHHhccHHHHHHHHHHHHhCC
Confidence 8898887 8999998 45799999999999999986 7889999999999999999999999999999975
|
|
| >KOG1438 consensus Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-54 Score=428.15 Aligned_cols=295 Identities=20% Similarity=0.239 Sum_probs=255.8
Q ss_pred HHHHHHHHHHhcC-C-CHHHHHHHHHhhhhcC----CCCCC-----C-C-CCCceEEccCCCCCCccccchHHHHHHHhc
Q 007779 256 LLSAFLIGQRMNR-E-TDRELKAYCLAFDDEL----GPPPV-----A-D-VKSLTHYGEPYDGNTRFFRSTLFVAAVRSC 322 (590)
Q Consensus 256 qigAFL~alr~Kg-E-T~eElag~~~A~~~~~----~~~~~-----~-~-~~~vD~~GtGgDG~~t~niST~laA~vlAa 322 (590)
+...||++|+... | .+|-|....+|+..+. .+++. + + .+.+|++||||||.||||+||. +|+|+|+
T Consensus 52 ~~~sfl~~L~~Tkae~~~e~l~ea~~al~s~s~~~~~pla~~~m~hpr~~~~~vDIVGTGGDG~NTfNvST~-saIvAag 130 (373)
T KOG1438|consen 52 ETLSFLVDLSETKAESSLEFLLEANEALISASLVLLVPLARAMMKHPRKVEDAVDIVGTGGDGANTFNVSTG-SAIVAAG 130 (373)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhccccchhhhhCcccCCceeEEeccCCCCcceeeecch-HHHHHhc
Confidence 3489999998643 3 5666677777777665 22221 1 1 2479999999999999999999 9999999
Q ss_pred CCCcEEeecCCCCCCCCCCCHHHHHHhcCCC-CCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCC---
Q 007779 323 YGESCLLHGAEWMPPKGGVTEEQMLKFMGAS-TNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRP--- 398 (590)
Q Consensus 323 ~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~-i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~Rt--- 398 (590)
||.+|+||||++.||.+|+ +|+|++||+. ++.+|+.+.+++++ .+|.|+.+|.|||+|+++.++||+||++|
T Consensus 131 ~GlkvcKhGnkaStSasGs--aDll~~lGCd~l~v~p~~i~~~~e~--~~f~Fl~aPm~Hp~mk~V~piRK~LgipTvFN 206 (373)
T KOG1438|consen 131 CGLKVCKHGNKASTSASGS--ADLLEALGCDVLDVGPEGIKRCVEE--GGFGFLMAPMYHPAMKIVGPIRKKLGIPTVFN 206 (373)
T ss_pred ccchhhhcCCccccccCcc--HHHHHhcCceeeccCCccccccccc--CceeEEechhhcccccchhHHHHhcCCccHHH
Confidence 9999999999999999999 9999999987 78999999999999 56666889999999999999999999999
Q ss_pred ---CCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCcccccc
Q 007779 399 ---PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSG 475 (590)
Q Consensus 399 ---PL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~ 475 (590)
||.||+++ .+.|+||||+++.+.||++++++|..+-++|.|..|.||+++.+
T Consensus 207 ilGPlLnP~~v---------~~rivGVy~k~L~~~~AKal~~~g~gs~~~V~g~~GLDE~SP~G---------------- 261 (373)
T KOG1438|consen 207 ILGPLLNPARV---------SYRIVGVYHKDLVVKMAKALQRFGMGSRALVVGSCGLDEMSPLG---------------- 261 (373)
T ss_pred hcccccCcchh---------hhheeeeeHHHHHHHHHHHHHHhCCCceEEEEeccCccccCCCC----------------
Confidence 77777654 58999999999999999999999999899999999999998654
Q ss_pred ccccCcceeEec-CCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCC---CCchhHHHHHHHHHHHHH
Q 007779 476 FRSLNVESTFEG-DGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGE---KGPTYDRIVLNAGMVDHL 550 (590)
Q Consensus 476 ~~~~~~t~v~~~-~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~---~~~~~d~v~lNAa~~L~l 550 (590)
+|++|.. ++++ ..+.|.++|.+||++++++.++ .++|.+||-..+++|+|+ ..|.+|.+++|+|++|++
T Consensus 262 -----~t~vw~v~~se~-k~e~f~~~P~~Fgl~~h~Ls~~asggP~~NAilleevLSg~~hagdPI~Dy~lmNtAall~v 335 (373)
T KOG1438|consen 262 -----GTLVWDVTPSEE-KIEEFSFDPLDFGLPRHTLSDLASGGPDYNAILLEEVLSGESHAGDPIADYLLMNTAALLLV 335 (373)
T ss_pred -----CceEEEecCCce-eeeeeecCHhhcCCCcCchhhhccCCCCccHHHHHHHhcCcccCCChHHHHHHHHHHHHHHH
Confidence 5788865 3333 2346999999999999999886 689999999999999998 357999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 551 LGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 551 ~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
++ .+++++||+..|+|.|.||+|++.|+.|+..++.
T Consensus 336 s~--~~q~l~EGv~~A~esisSG~Alr~L~~fi~~~s~ 371 (373)
T KOG1438|consen 336 SN--RVQTLAEGVTVARESISSGKALRTLDSFINISSL 371 (373)
T ss_pred hh--hhhHHHhhhHHHHHhhcchHHHHHHHHHHhhhhc
Confidence 86 7899999999999999999999999999977653
|
|
| >TIGR02644 Y_phosphoryl pyrimidine-nucleoside phosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=431.06 Aligned_cols=298 Identities=19% Similarity=0.184 Sum_probs=254.9
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC--C
Q 007779 216 VGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD--V 293 (590)
Q Consensus 216 ~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~--~ 293 (590)
.++|+++..|++||+||++++|+.|+ +|+++|.|++|||||+|+||||+||+++|++||+++..+++++. .
T Consensus 2 ~~~i~kk~~g~~Lt~eE~~~~~~~i~-------~G~~~d~QiaAfLmAl~~kGeT~eEi~g~t~Am~~~~~~l~~~~~~~ 74 (405)
T TIGR02644 2 VDIIRKKRDGKKLSDEEINFFINGYT-------NGEIPDYQMSALLMAIYFNGMTDEETAYLTKAMIDSGEVLDLSSLPG 74 (405)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCcccCC
Confidence 46899999999999999999999999 99999999999999999999999999999999999998888764 3
Q ss_pred CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcC-CCCCCCHHHHHHHHHhccCce
Q 007779 294 KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMG-ASTNLSVLQAKELLEDEEIGF 372 (590)
Q Consensus 294 ~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLG-i~i~~s~e~a~~~Le~~g~gf 372 (590)
+.+|+|||||||. |+||+ +|+++|++|+||+|||||+++|++|| +|+||+|| ++++++++++++++++ .||
T Consensus 75 ~~vD~~gTGGdG~---~iSt~-~a~ivAa~Gv~VaKhgnR~lss~~GT--aD~LE~lgG~~v~ls~e~~~~~l~~--~G~ 146 (405)
T TIGR02644 75 PKVDKHSTGGVGD---KVSLV-LGPIVAACGVKVAKMSGRGLGHTGGT--IDKLESIPGFRTELSEAEFIEIVNK--VGL 146 (405)
T ss_pred CeeEEeCCCCCCC---CchHH-HHHHHHhCCCCEEeeCCCCCCCcchH--HHHHHhcCCCCCCCCHHHHHHHHHH--cCe
Confidence 4899999999998 48998 99999999999999999999999999 99999998 9999999999999999 677
Q ss_pred Eeecch-hhChHhHHHHhhhcccCCCC--CCCcchhhhhhhhccCCceEEEEe--------cCCcchHHHHHHHHHcCCc
Q 007779 373 AYVSLR-EARPSLYSLIGLREHIKKRP--PVATSEKVQQFVRAQGREAIVAGF--------YHEGYEEPLLMLMKRRGVH 441 (590)
Q Consensus 373 ~fl~a~-~~~Pal~~l~~vR~~Lg~Rt--PL~np~k~~~~lnP~~~~~~v~GV--------~h~~~~~~~a~~l~~lG~~ 441 (590)
+|++++ ++||++++++++|++++.-. ||.++..+.+=+ +.+++++|++| ++.+....+|+.|..+|.+
T Consensus 147 ~fl~~~~~l~PAdk~l~~lRd~~~Tv~sipLi~aSimSKK~-A~G~~~~vlDVk~G~gAfm~~~e~a~~LA~~~~~~g~~ 225 (405)
T TIGR02644 147 AIIGQTKDLAPADKKLYALRDVTGTVDSIPLIASSIMSKKL-AAGADAIVLDVKVGSGAFMKTLEDAKELAKLMVEIGKG 225 (405)
T ss_pred EEecCccccCcchhHHHHHhhcccccCcHHHHHHHHHHHHH-hcCCCeEEEeecccCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 888899 99999999999999999333 888887543222 24679999999 9999999999999988854
Q ss_pred eEE--EEecCCCccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHH
Q 007779 442 SGL--VVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVS 519 (590)
Q Consensus 442 ~al--VV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~ 519 (590)
.++ ++... +++++ +|.. .+++.
T Consensus 226 ~g~~~~a~~t-~md~p------------------------------------------------lG~~-------iGnal 249 (405)
T TIGR02644 226 AGRKTSALLT-DMNQP------------------------------------------------LGRA-------IGNAL 249 (405)
T ss_pred cCCeEEEEec-CCCcc------------------------------------------------ccCC-------CCChh
Confidence 333 22221 12221 2211 12333
Q ss_pred HHHHHHHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 520 KNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 520 ~na~~~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
| ++...++|+|+ +.+.+|.++.||+.+|++.| ++.++++|+++|+++|+||+|++||++|+++|+.
T Consensus 250 E-v~Eai~~L~g~~p~dl~e~~~~la~~~L~~~g--~a~~~~~g~~~a~~~l~sG~Al~kf~~~v~aQGG 316 (405)
T TIGR02644 250 E-VKEAVEFLKGEGPADLKELTLALAAEMLLLAG--IAKTEKEARALAEDVLESGKALEKFRRFVEAQGG 316 (405)
T ss_pred h-HHHHHHHHCCCCcHHHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHhCC
Confidence 3 33347999998 56799999999999999976 7889999999999999999999999999999974
|
In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. |
| >PRK04350 thymidine phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-49 Score=427.29 Aligned_cols=311 Identities=20% Similarity=0.215 Sum_probs=261.5
Q ss_pred cCCcEEEEEcCCCCcccCCCchhhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCC
Q 007779 190 PEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRE 269 (590)
Q Consensus 190 ~~g~im~~~h~~gvQfHPEs~~~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgE 269 (590)
.+|+...++| ++.+... ++|+++.+|++||++|++++|+.|+ +|+++|.|++|||||+++|||
T Consensus 66 ~~g~~v~v~~-------a~~p~S~---~~I~kk~~G~~Ls~eE~~~~i~~i~-------~g~~sd~qiaAfL~Al~~kG~ 128 (490)
T PRK04350 66 SEGDEVEVSH-------APPPESL---SAIRKKIDGEKLDKEEIEAIIRDIV-------AGRYSDIELSAFLTASAINGL 128 (490)
T ss_pred CCCCeEEEec-------CCCCccH---HHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCC
Confidence 4566666655 6777777 6899999999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHh
Q 007779 270 TDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKF 349 (590)
Q Consensus 270 T~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLea 349 (590)
|.+|++++++||++++.+++++..+.+|+|||||||.+|+ |+. +++++|++|++|+|||||++||++|| +|+||+
T Consensus 129 t~~Ei~~lt~AM~~~g~~l~~~~~~~vDkhgTGGd~g~t~--S~~-~apivAA~Gv~VaKhgnRaiss~sGT--aD~LEa 203 (490)
T PRK04350 129 DMDEIEALTRAMVETGERLDWDRPPVVDKHSIGGVPGNRT--TLI-VVPIVAAAGLTIPKTSSRAITSPAGT--ADTMEV 203 (490)
T ss_pred CHHHHHHHHHHHHHhCCcccCCCCCeEEecCCCCCCCCCE--eHH-HHHHHHhCCCceeeecCCCCCCCCch--HHHHHH
Confidence 9999999999999999998876556899999999988886 555 77788999999999999999999999 999999
Q ss_pred cCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCC-CCCcchhhhhhhh--------------ccC
Q 007779 350 MGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRP-PVATSEKVQQFVR--------------AQG 414 (590)
Q Consensus 350 LGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~Rt-PL~np~k~~~~ln--------------P~~ 414 (590)
|| ++++++++++++++++|++|+|-.+++|||+|++++++|+.++++| |+.... .|| |.+
T Consensus 204 Lg-~v~ls~e~~~~~l~~~G~~flfG~a~~l~PAdk~l~~vR~~l~vds~~li~aS----ImSKKlA~G~~~lvlDVp~G 278 (490)
T PRK04350 204 LA-PVDLSVEEIKRVVEKVGGCLVWGGAVNLSPADDILIRVERPLSIDPRGQLVAS----ILSKKIAAGSTHVVIDIPVG 278 (490)
T ss_pred hh-cCCCCHHHHHHHHHHcCEEEEECCccccCHHHHHHHHHhhhcCCCcHHHHHHH----HhhhHhhcCCCceEEecccC
Confidence 99 9999999999999996555544449999999999999999999999 554332 256 777
Q ss_pred CceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEecCCcEEee
Q 007779 415 REAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQS 494 (590)
Q Consensus 415 ~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~ 494 (590)
...+ |++.+..+.+++.|..+|.+.++.+. ..+| ++..
T Consensus 279 ~ga~---v~~~~~A~~LA~~~~~vg~~~g~~v~-----a~lT-------------------------------d~~q--- 316 (490)
T PRK04350 279 PTAK---VRSVEEARRLARLFEEVGDRLGLRVE-----CAIT-------------------------------DGSQ--- 316 (490)
T ss_pred CCCc---CCCHHHHHHHHHHHHHHHHhcCCeEE-----EEEC-------------------------------CCCe---
Confidence 6666 78888899999999888865555541 1111 1110
Q ss_pred eeEEEecCCCCCCCCCCCccCCCHHHHHHHHHHHHCCC---CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Q 007779 495 FNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGE---KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAID 571 (590)
Q Consensus 495 ~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~~~~vL~G~---~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~ 571 (590)
|-.+ +..++.+++...++|+|+ +.+.++.++.||+.+|++.| .+ +.++|+++|+++|+
T Consensus 317 ------PlG~----------~iGnalEv~e~l~vL~g~~~gp~dl~e~~l~lA~~~L~~~g--~~-~~~~g~~~a~~~L~ 377 (490)
T PRK04350 317 ------PIGR----------GIGPALEARDVLAVLENDPDAPNDLREKSLRLAGILLEMGG--VA-PGGEGYALAREILE 377 (490)
T ss_pred ------ehhc----------cCCchHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHh
Confidence 1111 224778889999999994 45689999999999999976 44 99999999999999
Q ss_pred chHHHHHHHHHHHHhcc
Q 007779 572 SGKALKRLLNYIKISHK 588 (590)
Q Consensus 572 SG~A~~~L~~~~~~~~~ 588 (590)
||+|++||++|+++|+.
T Consensus 378 sG~Al~kf~~ii~aQGG 394 (490)
T PRK04350 378 SGKALEKFQEIIEAQGG 394 (490)
T ss_pred CcHHHHHHHHHHHHcCC
Confidence 99999999999999975
|
|
| >COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-48 Score=371.53 Aligned_cols=158 Identities=20% Similarity=0.263 Sum_probs=142.0
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
++|++.||.|| +||+++|.+++|+|||.++..+.. ...||+||||||||+|. |+|+++++
T Consensus 2 ~~IL~IDNyDSFtyNLv~yl~~lg~~v~V~rnd~~~~~~~~----------~~~pd~iviSPGPG~P~---d~G~~~~~- 67 (191)
T COG0512 2 MMILLIDNYDSFTYNLVQYLRELGAEVTVVRNDDISLELIE----------ALKPDAIVISPGPGTPK---DAGISLEL- 67 (191)
T ss_pred ceEEEEECccchHHHHHHHHHHcCCceEEEECCccCHHHHh----------hcCCCEEEEcCCCCChH---HcchHHHH-
Confidence 46899999999 999999999999999977766422 12479999999999999 99999999
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CC--------ceeEEeccchhccc--cCCCcEEEE
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EG--------ERRAMNTFWPLLMR--ALPPDVIFI 187 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~--------~~~~~~ryHsl~v~--~~p~~l~v~ 187 (590)
|+++.+++|||| |||||+|+++|||+|.|+ +.|+|||+| +| ++|.++|||||+|+ ++|++|+||
T Consensus 68 i~~~~~~~PiLGVCLGHQai~~~fGg~V~~a-~~~~HGK~s~i~h~g~~iF~glp~~f~v~RYHSLvv~~~~lP~~l~vt 146 (191)
T COG0512 68 IRRFAGRIPILGVCLGHQAIAEAFGGKVVRA-KEPMHGKTSIITHDGSGLFAGLPNPFTVTRYHSLVVDPETLPEELEVT 146 (191)
T ss_pred HHHhcCCCCEEEECccHHHHHHHhCCEEEec-CCCcCCeeeeeecCCcccccCCCCCCEEEeeEEEEecCCCCCCceEEE
Confidence 999988999999 999999999999999999 899999998 23 28999999999995 499999999
Q ss_pred e-ecC-CcEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 188 A-DPE-GSIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 188 a-~~~-g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
| ++| |.|||++|+ ||||||||| +.|++ ++|||+.
T Consensus 147 A~~~d~~~IMai~h~~~pi~gvQFHPESilT~~G~~il~Nfl~~ 190 (191)
T COG0512 147 AESEDGGVIMAVRHKKLPIYGVQFHPESILTEYGHRILENFLRL 190 (191)
T ss_pred EEeCCCCEEEEEeeCCCCEEEEecCCccccccchHHHHHHHHhh
Confidence 9 655 599999999 999999999 88888 9999864
|
|
| >PRK05820 deoA thymidine phosphorylase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-45 Score=390.55 Aligned_cols=307 Identities=20% Similarity=0.193 Sum_probs=235.6
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCC-
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA- 291 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~- 291 (590)
|+++++|+++..|++||++|++++|+.|+ +|+++|.|++|||||+|+||||+||+++|++||+++..+++++
T Consensus 2 m~~~~~I~kk~~g~~Lt~eE~~~~~~~i~-------~G~~~d~QiaAfLmAl~~kG~t~eEi~~lt~Am~~sg~~i~~~~ 74 (440)
T PRK05820 2 FLAQEIIRKKRDGGALSDEEIDWFIDGYT-------DGTVSDGQIAALAMAIFFNGMTRPERVALTLAMRDSGEVLDWSS 74 (440)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCcc
Confidence 67899999999999999999999999999 9999999999999999999999999999999999999888764
Q ss_pred ---CCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHh
Q 007779 292 ---DVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLED 367 (590)
Q Consensus 292 ---~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~ 367 (590)
+.+.+|+|||||||+ |+||+ +|+++|++|++|+|||||++++++|| +|+||+| |++++++++++.++|++
T Consensus 75 ~d~~~~~vDkhgTGGdG~---niS~~-~a~ivAa~Gv~VaKhg~R~lss~~GT--aD~LE~LpG~~v~ls~e~~~~~l~~ 148 (440)
T PRK05820 75 LNLNGPIVDKHSTGGVGD---KISLM-LAPMVAACGGYVPMISGRGLGHTGGT--LDKLEAIPGYRAFPSNDRFREILKD 148 (440)
T ss_pred ccCCCCeEEEcCCCCCCc---cHHHH-HHHHHHhCCCCEEeeCCCCCCCcccH--HHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 234799999999998 89998 99999999999999999999999999 9999999 99999999999999999
Q ss_pred ccCceEeecch-hhChHhHHHHhhhcccCCCC--CCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEE
Q 007779 368 EEIGFAYVSLR-EARPSLYSLIGLREHIKKRP--PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGL 444 (590)
Q Consensus 368 ~g~gf~fl~a~-~~~Pal~~l~~vR~~Lg~Rt--PL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~al 444 (590)
.||+|++++ +|||++++++++|+.++.-. ||.... |-+ +++| .|.++.+
T Consensus 149 --~G~~~~~~~~~l~PAdk~l~~lRdvt~tvds~pli~aS-----------------ImS----KK~A-----~G~~~lv 200 (440)
T PRK05820 149 --VGVAIIGQTSDLAPADKRLYALRDVTATVESIPLITAS-----------------ILS----KKLA-----EGLDALV 200 (440)
T ss_pred --cCeEEEcCchhcChHHHHHHHHhcccCCCChHHHHHHH-----------------HHH----HHHH-----cCCCeEE
Confidence 578888898 99999999999999887655 554332 222 2233 4764443
Q ss_pred E-Ee-cCCCccccccccccccccCCCCccccccccccCccee--EecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHH
Q 007779 445 V-VK-GEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVEST--FEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSK 520 (590)
Q Consensus 445 V-V~-G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v--~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~ 520 (590)
+ |+ | .|..--+... ..++ ..+.+ ...-|.- ...--.|+ ..|+.... .+..
T Consensus 201 lDVk~G-~gAfmkt~~~-------------A~~L---a~~mv~ig~~~g~~-----~~a~lTdm---~qPlG~~i-Gnal 254 (440)
T PRK05820 201 LDVKVG-SGAFMKTYEE-------------AREL---ARSMVEVANGAGVR-----TTALLTDM---NQPLASSA-GNAL 254 (440)
T ss_pred EEcCCC-CCCCCCCHHH-------------HHHH---HHHHHHHHHHcCCe-----EEEEEccC---CCcccCcc-chHH
Confidence 3 55 4 3542111000 0000 00111 0111211 11111122 12233322 3444
Q ss_pred HHHHHHHHHCCC--CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 521 NIELGLAALRGE--KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 521 na~~~~~vL~G~--~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
.++...++|+|+ +.+..+.++.-|+.+|++.| .+.+.++|.++++++|+||+|++||.+|+++|+.
T Consensus 255 Ev~Eai~~L~g~~gp~dl~e~~~~la~~ml~~~g--~~~~~~~g~~~~~~~l~sG~Al~kF~~~v~aQGG 322 (440)
T PRK05820 255 EVREAVEFLTGGYRPPRLVEVTMALAAEMLVLAG--LAKDEAEARADLAAVLDSGKAAERFGRMVAAQGG 322 (440)
T ss_pred HHHHHHHHHCCCCCChhHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhCC
Confidence 455577999998 34466777777888988875 7789999999999999999999999999999975
|
|
| >TIGR02645 ARCH_P_rylase putative thymidine phosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=380.84 Aligned_cols=322 Identities=18% Similarity=0.180 Sum_probs=246.5
Q ss_pred cCCcEEEEEcCCCCcccCCCchhhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCC
Q 007779 190 PEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRE 269 (590)
Q Consensus 190 ~~g~im~~~h~~gvQfHPEs~~~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgE 269 (590)
.+|+...++| ++.+..+ ++|+++.+|++||++|++++|+.|+ +|+++|.|++|||+|+++|||
T Consensus 71 ~~g~~v~v~~-------~~~p~S~---~~I~kk~~G~~Lt~eE~~~ii~~i~-------~g~~~d~qiaAfL~Al~~kG~ 133 (493)
T TIGR02645 71 REGDIVTVTP-------AEAPESL---RAIRKKIDGAKLDQHEIASIVGDIV-------DERLSDVEISAFLTASAINGM 133 (493)
T ss_pred CCCCEEEEec-------CCCCchH---HHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCC
Confidence 4566666655 7777777 6899999999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHh
Q 007779 270 TDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKF 349 (590)
Q Consensus 270 T~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLea 349 (590)
|.+|++++++||+++..+++++..+.+|+||||||+.++||++ +++++|++|++|+|||||++||++|| +|+||.
T Consensus 134 t~~Ei~~lt~AM~~sg~~l~~~~~~~vDkhgTGGd~gnk~ni~---~apIvAA~Gv~VaKhsnRaits~sGT--AD~LE~ 208 (493)
T TIGR02645 134 TMDEIEALTIAMADTGEMLEWDREPIMDKHSIGGVPGNKTSLI---VVPIVAAAGLLIPKTSSRAITSAAGT--ADTMEV 208 (493)
T ss_pred CHHHHHHHHHHHHHhCCCccCCCCCeEEEeCCCCCCCCCEeHH---HHHHHHhCCCCeeeeCCCCcCCCccH--HHHHHH
Confidence 9999999999999999998876556899999999999999883 66777999999999999999999999 999999
Q ss_pred cCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCC-CCCcchhhhhhhhccCCceEEEEecCCcch
Q 007779 350 MGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRP-PVATSEKVQQFVRAQGREAIVAGFYHEGYE 428 (590)
Q Consensus 350 LGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~Rt-PL~np~k~~~~lnP~~~~~~v~GV~h~~~~ 428 (590)
|| ++++++++++++++++|++|+|-.+++|||++++++++|+.|++.+ ||.... |-+|+
T Consensus 209 Lg-~v~ls~e~~~~~ve~~G~~fl~G~a~~l~PAdk~i~~vR~~l~vds~~li~aS-----------------ImSKK-- 268 (493)
T TIGR02645 209 LT-RVALSAEEIKRIVEKVGGCLVWGGALNLAPADDVLIRVERPLSIDPRAQMLAS-----------------IMSKK-- 268 (493)
T ss_pred hc-CCCCCHHHHHHHHHHCCEEEEECCCcccCHHHHHHHHHHhhcCCCcHHHHHHH-----------------HHHHH--
Confidence 99 9999999999999996555545449999999999999999999998 776432 22333
Q ss_pred HHHHHHHHHcCCceEEE-EecCCCccccccccccccccCCCCccccccccccCccee--EecCCcEEeeeeEEEecCCCC
Q 007779 429 EPLLMLMKRRGVHSGLV-VKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVEST--FEGDGVSRQSFNLEVNASNYG 505 (590)
Q Consensus 429 ~~~a~~l~~lG~~~alV-V~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v--~~~~g~~~~~~~~~i~P~d~G 505 (590)
+| .|.++.++ |+=-.|..--+... ..+|. .+.+ ...-|...+ ..+ .|.
T Consensus 269 --lA-----~G~~~lvlDvk~G~gAf~~~~~~-------------A~~La---~~~~~vg~~~G~~~~---a~i--Tdm- 319 (493)
T TIGR02645 269 --IA-----AGSTHVLIDIPVGPGAKVRSLQE-------------AERLA---RLFIELGDRLGVRVE---CAI--TYG- 319 (493)
T ss_pred --Hh-----cCCCeEEEeccccCCCcCCCHHH-------------HHHHH---HHHHHHHHHcCCeEE---EEE--CCC-
Confidence 34 37766555 44223431000000 00000 0000 001121110 112 122
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHCCC---CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHH
Q 007779 506 FEPTNTPRADRSVSKNIELGLAALRGE---KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNY 582 (590)
Q Consensus 506 l~~~~~~~~~~~~~~na~~~~~vL~G~---~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~ 582 (590)
..|+.+. ..+.-.++...++|+|+ +.+.++.++.-|+.+|.+.| .+. ..+|+++|++.|+||+|++||++|
T Consensus 320 --~qPlG~~-iGnalEv~Eal~~L~g~~~~p~dL~e~~~~la~~~L~~~g--~~~-~~~g~~~a~~~l~sG~Al~kf~~i 393 (493)
T TIGR02645 320 --SQPIGRG-IGPALEAKEALAVLERSPAAPFSLREKSLLLAGILLEMGG--AAP-RGAGKELARELLDSGKALEKMKEI 393 (493)
T ss_pred --CCccccc-cCcHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhCC--CCC-hHHHHHHHHHHHhCcHHHHHHHHH
Confidence 1233332 24556666688999997 45688999999999999876 454 699999999999999999999999
Q ss_pred HHHhcc
Q 007779 583 IKISHK 588 (590)
Q Consensus 583 ~~~~~~ 588 (590)
+++|+.
T Consensus 394 i~aQGG 399 (493)
T TIGR02645 394 IEAQGG 399 (493)
T ss_pred HHHcCC
Confidence 999975
|
Members of this family are closely related to characterized examples of thymidine phosphorylase (EC 2.4.2.4) and pyrimidine nucleoside phosphorylase (RC 2.4.2.2). Most examples are found in the archaea, but other examples in Legionella pneumophila str. Paris and Rhodopseudomonas palustris CGA009. |
| >TIGR02643 T_phosphoryl thymidine phosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=373.78 Aligned_cols=306 Identities=18% Similarity=0.180 Sum_probs=234.9
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCC--C
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA--D 292 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~--~ 292 (590)
+.++|+++.+|++||++|++++|+.|+ +|+++|.|++|||||+++||||.+|+++|++||+++..+++++ +
T Consensus 3 ~~~~I~kk~~G~~Lt~eE~~~~i~~i~-------~g~i~d~QiaAfLmAl~~kG~t~~Ei~~lt~aM~~sg~~i~~~~~~ 75 (437)
T TIGR02643 3 PQEIIRKKRDGHSLSDAEIAQFINGIT-------DGSVSEGQIAAFAMAVFFNGMNRDERVALTLAMRDSGDVLDWRSLD 75 (437)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcccCcccc
Confidence 357899999999999999999999999 9999999999999999999999999999999999999988775 2
Q ss_pred --CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhcc
Q 007779 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (590)
Q Consensus 293 --~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g 369 (590)
...+|+|||||||. |+||+ +|+++|++|++|+|||||+++|++|| +|+||+| |++++++++++.++|++
T Consensus 76 ~~~~~vDkhgTGGdG~---niSt~-~apivAA~Gv~VaKhgnR~iss~~GT--aD~LEalpG~~v~ls~e~~~~~l~~-- 147 (437)
T TIGR02643 76 LNGPVVDKHSTGGVGD---VVSLM-LGPIVAACGGYVPMISGRGLGHTGGT--LDKLEAIPGYDIFPDPALFRRVVKD-- 147 (437)
T ss_pred cCCCeeEecCCCCCCc---chhHH-HHHHHHhCCCCeeeecCCCcCCCCch--HHHHHhCCCCCCCCCHHHHHHHHHH--
Confidence 34799999999998 79998 99999999999999999999999999 9999999 99999999999999999
Q ss_pred CceEeec-chhhChHhHHHHhhhcccCCCC--CCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEE-
Q 007779 370 IGFAYVS-LREARPSLYSLIGLREHIKKRP--PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLV- 445 (590)
Q Consensus 370 ~gf~fl~-a~~~~Pal~~l~~vR~~Lg~Rt--PL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alV- 445 (590)
.||+|++ ++++||+++.++++|...+.-. ||.... |-+| ++| .|.++.++
T Consensus 148 ~g~~f~gqa~~l~PADk~ly~lRDvt~tVds~pLi~aS-----------------ImSK----KlA-----~g~d~ivlD 201 (437)
T TIGR02643 148 VGVAIIGQTADLAPADKRFYATRDVTATVESIPLITAS-----------------ILSK----KLA-----AGLDALVMD 201 (437)
T ss_pred cCceEEccCCCcCcchhceeeeeeecCCCCcHHHHHHH-----------------HHHH----HHH-----cCCCeEEEE
Confidence 4666676 7999999999999997665443 555432 2222 234 37655544
Q ss_pred EecCCCccccccccccccccCCCCccccccccccCccee--EecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHH
Q 007779 446 VKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVEST--FEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIE 523 (590)
Q Consensus 446 V~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v--~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~ 523 (590)
|+--.|..--+... ..++ ..+.+ ...-|.-.. ..+ .|+ ..|+....+++-| ++
T Consensus 202 Vk~G~gAfmk~~~~-------------A~~L---A~~mv~ig~~~g~~~~---a~i--Tdm---~qPlG~~iGnalE-v~ 256 (437)
T TIGR02643 202 VKVGNGAFMPTYEE-------------SEEL---ARSLVDVANGAGVRTT---ALI--TDM---NQPLASAAGNAVE-VR 256 (437)
T ss_pred cCcCCCCcCCCHHH-------------HHHH---HHHHHHHHHHcCCeEE---EEE--CCC---CCccccccCcHHH-HH
Confidence 55324542111000 0000 00111 011221110 111 122 1233332234444 44
Q ss_pred HHHHHHCCC--CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 524 LGLAALRGE--KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 524 ~~~~vL~G~--~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
...++|+|+ +.+..+.++.-|+.+|.+.| .+.+.++|.+++++.|+||+|++||.+|+++|+.
T Consensus 257 Eai~~L~g~~gp~dl~e~~~~la~~ml~~~g--~~~~~~~~~~~~~~~l~sG~Al~kF~~~v~aQGG 321 (437)
T TIGR02643 257 NAVDFLTGEKRNPRLEDVTMALAAEMLVSGG--LAADEAEARAKLQAVLDSGRAAERFARMVAALGG 321 (437)
T ss_pred HHHHHHCCCCCCccHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHcCC
Confidence 467999997 45688999999999998875 7788999999999999999999999999999974
|
Thymidine phosphorylase (alternate name: pyrimidine phosphorylase), EC 2.4.2.4, is the designation for the enzyme of E. coli and other Proteobacteria involved in (deoxy)nucleotide degradation. It often occurs in an operon with a deoxyribose-phosphate aldolase, phosphopentomutase and a purine nucleoside phosphorylase. In many other lineages, the corresponding enzyme is designated pyrimidine-nucleoside phosphorylase (EC 2.4.2.2); the naming convention imposed by this model represents standard literature practice. |
| >TIGR03327 AMP_phos AMP phosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=369.47 Aligned_cols=322 Identities=14% Similarity=0.150 Sum_probs=244.0
Q ss_pred cCCcEEEEEcCCCCcccCCCchhhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCC
Q 007779 190 PEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRE 269 (590)
Q Consensus 190 ~~g~im~~~h~~gvQfHPEs~~~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgE 269 (590)
.+|+...++| ++.+... ++|+++..|++||++|++++|+.|+ +|+++|.|++|||||+++|||
T Consensus 72 ~~g~~v~v~~-------a~~~~s~---~~I~kk~~G~~Ls~eEi~~ii~~i~-------~g~~~d~QiaAfL~Al~~kG~ 134 (500)
T TIGR03327 72 SEGEVVEVTP-------AEKPESV---EYIKKKMDGEKLTKDEIRAIVADIV-------DDKLSDIEISAFVTASYINGM 134 (500)
T ss_pred CCCCEEEEec-------CCCchHH---HHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCC
Confidence 4577666655 6666666 7899999999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHh
Q 007779 270 TDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKF 349 (590)
Q Consensus 270 T~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLea 349 (590)
|.+|++++++||+++..+++++..+.+|+|||||||.++||++ +++++|+||++|+|||||++||++|| +|+||+
T Consensus 135 t~~Eia~lt~AM~~sg~~l~~~~~~vvDkhgTGGd~gnk~nl~---~apIVAA~Gv~VaKhsnRaits~sGT--aD~LEs 209 (500)
T TIGR03327 135 DMDEIEWLTRAMAETGDMLSFDRHPIMDKHSIGGVPGNKISLL---VVPIVAAAGLTIPKTSSRAITSAAGT--ADVMEV 209 (500)
T ss_pred CHHHHHHHHHHHHHhCCcccCCCCCeEEEeCCCCCCCCCEEHH---HHHHHHhCCCCeeeeCCCCcCCCccH--HHHHHH
Confidence 9999999999999999988886556899999999999999883 56677999999999999999999999 999999
Q ss_pred cCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCC-CCCcchhhhhhhhccCCceEEEEecCCcch
Q 007779 350 MGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRP-PVATSEKVQQFVRAQGREAIVAGFYHEGYE 428 (590)
Q Consensus 350 LGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~Rt-PL~np~k~~~~lnP~~~~~~v~GV~h~~~~ 428 (590)
|+ +++++++++.++++++|++|+|-.+++|||++++++.+|+.+.+.+ ||.... |-+|+
T Consensus 210 L~-~v~ls~e~~~~~v~~~G~~fl~Gqa~~l~PAdk~l~alrdt~tvds~~li~aS-----------------ImSKK-- 269 (500)
T TIGR03327 210 LA-PVEFSADEIKRIVEKTGGCLVWGGATNLAPADDKIIKVERPLSIDPRGQMLAS-----------------VMAKK-- 269 (500)
T ss_pred hh-CCCCCHHHHHHHHHHCCEEEEECCccccCHHHHHHHHhccccCCCcHHHHHHH-----------------HHHHH--
Confidence 95 9999999999999996555555448999999999999999777776 665432 22222
Q ss_pred HHHHHHHHHcCCceEEE-EecCCCccccccccccccccCCCCccccccccccCcceeE--ecCCcEEeeeeEEEecCCCC
Q 007779 429 EPLLMLMKRRGVHSGLV-VKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTF--EGDGVSRQSFNLEVNASNYG 505 (590)
Q Consensus 429 ~~~a~~l~~lG~~~alV-V~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~--~~~g~~~~~~~~~i~P~d~G 505 (590)
+| .|.++.++ |+=-.|..--+... ..+| ..+.+. ..-|.... ..+ .|+
T Consensus 270 --lA-----~G~d~lvlDVk~G~gAfm~~~~~-------------A~~L---A~~mv~vg~~~G~~~~---a~i--Tdm- 320 (500)
T TIGR03327 270 --GA-----IGADHVVIDIPVGKGAKVKTVEE-------------GRKL---ARDFIELGDRLGMNVE---CAI--TYG- 320 (500)
T ss_pred --HH-----cCCCeEEEEcCcCCCCcCCCHHH-------------HHHH---HHHHHHHHHHcCCeEE---EEE--CCC-
Confidence 34 37655554 55223432100000 0000 001110 11121110 112 122
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHCC-C-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHH
Q 007779 506 FEPTNTPRADRSVSKNIELGLAALRG-E-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYI 583 (590)
Q Consensus 506 l~~~~~~~~~~~~~~na~~~~~vL~G-~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~ 583 (590)
..|+.+. ..+.-.++...++|+| + +.+.++.++.-|+.+|.+.| .+. ..+|+++|+++|+||+|++||++|+
T Consensus 321 --~qPlG~~-iGnaLEv~Eal~~L~g~~~p~dL~e~~~~la~~~L~~~g--~~~-~~~g~~~a~~~l~sG~Al~kf~~ii 394 (500)
T TIGR03327 321 --GQPIGRA-IGPALEAKEALKVLEDGEGPNSLIEKSLSLAGILLEMGG--VAP-RGEGKNLALEILESGKALEKFKEII 394 (500)
T ss_pred --CCccccc-cCcHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHhCC--CCC-hHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 1233332 2445556667899999 4 56689999999999999876 555 7999999999999999999999999
Q ss_pred HHhcc
Q 007779 584 KISHK 588 (590)
Q Consensus 584 ~~~~~ 588 (590)
++|+.
T Consensus 395 ~aQGG 399 (500)
T TIGR03327 395 AAQGG 399 (500)
T ss_pred HHcCC
Confidence 99975
|
This enzyme family is found, so far, strictly in the Archaea, and only in those with a type III Rubisco enzyme. Most of the members previously were annotated as thymidine phosphorylase, or DeoA. The AMP metabolized by this enzyme may be produced by ADP-dependent sugar kinases. |
| >KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=311.03 Aligned_cols=157 Identities=13% Similarity=0.137 Sum_probs=142.5
Q ss_pred eeEeeccccH------HHH-HHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 50 RLTVKADLDS------ALI-DQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 50 ~~~~~~~~d~------~~~-~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.|.+.||.|| +|| .|+|+++.|+|||++++++... + +|++++||||||+|. |.|++.+.
T Consensus 20 piv~IDNYDSFT~Nv~qYL~~e~g~~~~VyRNDeiTV~El~~---------~-NP~~LliSPGPG~P~---DsGIs~~~- 85 (223)
T KOG0026|consen 20 PIIVIDNYDSFTYNLCQYLMGELGCHFEVYRNDELTVEELKR---------K-NPRGLLISPGPGTPQ---DSGISLQT- 85 (223)
T ss_pred CEEEEecccchhHHHHHHhhhccCccEEEEecCcccHHHHhh---------c-CCCeEEecCCCCCCc---cccchHHH-
Confidence 6899999999 888 8899999999999999987442 1 568999999999999 99999999
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCC-CCcCcccc----CC-----------ceeEEeccchhcc--ccCC-C
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANA-FPEATQWS----EG-----------ERRAMNTFWPLLM--RALP-P 182 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~-~~~hG~~s----~~-----------~~~~~~ryHsl~v--~~~p-~ 182 (590)
|+++.+++|+|| |+|.|+|.++|||+|.++ + .++|||+| |+ ++|.++|||||+. +++| +
T Consensus 86 i~~f~~~iP~fGvCMGlQCi~e~fGGkv~~a-~~~i~HGK~S~i~~D~~~~~G~f~g~~q~~~V~RYHSLa~~~sSlP~d 164 (223)
T KOG0026|consen 86 VLELGPLVPLFGVCMGLQCIGEAFGGKIVRS-PFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHSLVIEKDSFPSD 164 (223)
T ss_pred HHHhCCCCceeeeehhhhhhhhhhCcEEecc-CcceeeccccccccCCccccccccCCCCCeEEEeeeeeeeecccCCcc
Confidence 999999999999 999999999999999999 7 78999998 33 2899999999999 6899 8
Q ss_pred cEEEEe-ecCCcEEEEEcC-----CCCcccCCC---chhhH-HHHHHHH
Q 007779 183 DVIFIA-DPEGSIMGGGGS-----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 183 ~l~v~a-~~~g~im~~~h~-----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
+|+||| ++||.|||.||+ .|||||||| +.|.. ++|||+-
T Consensus 165 ~L~VTawTEnG~iMgaRHkKY~~ieGVQfHPESIlteeGk~~irNflni 213 (223)
T KOG0026|consen 165 ELEVTAWTEDGLVMAARHRKYKHIQGVQFHPESIITTEGKTIVRNFIKI 213 (223)
T ss_pred ceeeeEeccCcEEEeeeccccccccceeecchhhhhhhhHHHHHHHHHh
Confidence 999999 999999999999 899999999 77776 7888753
|
|
| >PRK08007 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=284.63 Aligned_cols=155 Identities=20% Similarity=0.199 Sum_probs=135.7
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.||.|| +||+++|.++.|+|||+++.++.. ...||+||||||||+|. +.+...++ ++
T Consensus 2 il~idn~Dsft~nl~~~l~~~g~~v~v~~~~~~~~~~~~----------~~~~d~iils~GPg~p~---~~~~~~~~-~~ 67 (187)
T PRK08007 2 ILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADID----------ALKPQKIVISPGPCTPD---EAGISLDV-IR 67 (187)
T ss_pred EEEEECCCccHHHHHHHHHHCCCcEEEEeCCCCCHHHHH----------hcCCCEEEEcCCCCChH---HCCccHHH-HH
Confidence 799999999 889999999999999988765422 11468999999999999 77778888 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccc--cCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMR--ALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~--~~p~~l~v~a- 188 (590)
.+..++|+|| |||||+|+.+|||+|.++ +.++||+++ + ..++.+++|||+.|+ ++|++++++|
T Consensus 68 ~~~~~~PiLGIClG~Q~la~a~Gg~v~~~-~~~~~g~~~~v~~~~~~l~~~~~~~~~v~~~H~~~v~~~~lp~~~~v~a~ 146 (187)
T PRK08007 68 HYAGRLPILGVCLGHQAMAQAFGGKVVRA-AKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFEVTAW 146 (187)
T ss_pred HhcCCCCEEEECHHHHHHHHHcCCEEEeC-CCcccCCceEEEECCCCcccCCCCCcEEEEcchhEEccCCCCCCeEEEEE
Confidence 8888999999 999999999999999999 899999875 1 125899999999995 8999999999
Q ss_pred ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHH
Q 007779 189 DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 189 ~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
++||.|||++|+ ||||||||| +.|+. |++|+.
T Consensus 147 ~~~~~i~a~~~~~~~i~GvQfHPE~~~t~~G~~il~nFl~ 186 (187)
T PRK08007 147 SETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLH 186 (187)
T ss_pred eCCCcEEEEEeCCCCEEEEEeCCcccCCcchHHHHHHHhh
Confidence 889999999998 899999998 66776 888875
|
|
| >PLN02889 oxo-acid-lyase/anthranilate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=334.92 Aligned_cols=167 Identities=17% Similarity=0.151 Sum_probs=141.8
Q ss_pred ceeEeeccccH------HHHHHh-CCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHH
Q 007779 49 IRLTVKADLDS------ALIDQL-GLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDT 121 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~l-g~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~ 121 (590)
+++++.||.|| +||+++ |.++.|+|||+++.+++...... +..||+||||||||+|.+.+++|+++++
T Consensus 82 ~~iLlIDnyDSfTyNL~~~L~~~~g~~~~Vv~nd~~~~~~~~~~~~~-----~~~~d~IVlSPGPG~P~~~~d~Gi~~~~ 156 (918)
T PLN02889 82 VRTLLIDNYDSYTYNIYQELSIVNGVPPVVVRNDEWTWEEVYHYLYE-----EKAFDNIVISPGPGSPTCPADIGICLRL 156 (918)
T ss_pred ceEEEEeCCCchHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHhhhhc-----ccCCCEEEECCCCCCccchHHHHHHHHH
Confidence 58999999999 889998 99999999999877653210000 2357999999999999888899999999
Q ss_pred HHHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CC--------c----eeEEeccchhcc--ccCCC
Q 007779 122 ILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EG--------E----RRAMNTFWPLLM--RALPP 182 (590)
Q Consensus 122 ~i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~--------~----~~~~~ryHsl~v--~~~p~ 182 (590)
|+++ .++|||| |||||+|+++|||+|.++ +.++||+++ ++ . .|.++|||||+| .++|+
T Consensus 157 -i~~~-~~iPILGICLGhQ~i~~~~Gg~V~~~-~~~~HG~~s~I~h~~~~lF~glp~~~~~~f~v~RYHSL~v~~~~lP~ 233 (918)
T PLN02889 157 -LLEC-RDIPILGVCLGHQALGYVHGARIVHA-PEPVHGRLSEIEHNGCRLFDDIPSGRNSGFKVVRYHSLVIDAESLPK 233 (918)
T ss_pred -HHHh-CCCcEEEEcHHHHHHHHhcCceEEeC-CCceeeeeeeEeecCchhhcCCCcCCCCCceEEeCCCcccccCCCCC
Confidence 7765 4699999 999999999999999999 899999987 11 1 499999999999 47999
Q ss_pred cEEEEe-ecC-----------------------------------------------------CcEEEEEcC----CCCc
Q 007779 183 DVIFIA-DPE-----------------------------------------------------GSIMGGGGS----IGPH 204 (590)
Q Consensus 183 ~l~v~a-~~~-----------------------------------------------------g~im~~~h~----~gvQ 204 (590)
+|+++| +++ +.|||++|+ ||||
T Consensus 234 ~L~~~A~t~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viMairH~~~P~~GVQ 313 (918)
T PLN02889 234 ELVPIAWTSSSDTLSFLESQKSGLVPDAYESQIGQSGSSDPFSSKLKNGTSWPSSHSERMQNGKILMGIMHSTRPHYGLQ 313 (918)
T ss_pred ceEEEEEECCCcccccccccccccccccccccccccccccccccccccccccccccccccCCCCeeEEEEECCCceEEEE
Confidence 999999 644 589999999 9999
Q ss_pred ccCCC---chhhH-HHHHHHHhh
Q 007779 205 YSGND---PREMR-LVGALREVL 223 (590)
Q Consensus 205 fHPEs---~~~m~-L~~~L~kl~ 223 (590)
||||| +.|.. |.||++...
T Consensus 314 fHPESi~t~~G~~l~~nF~~~~~ 336 (918)
T PLN02889 314 FHPESIATCYGRQIFKNFREITQ 336 (918)
T ss_pred eCCccccCchhHHHHHHHHHHHH
Confidence 99999 77777 999997654
|
|
| >PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=265.83 Aligned_cols=157 Identities=17% Similarity=0.197 Sum_probs=135.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|+++||.|| .||+++|.++.|+|+|+++.+++. ...+|+||||||||+|. +.+...+. ++
T Consensus 2 il~idn~dsft~nl~~~l~~~g~~v~v~~~~~~~~~~~~----------~~~~d~iIlsgGP~~p~---~~~~~~~~-i~ 67 (195)
T PRK07649 2 ILMIDNYDSFTFNLVQFLGELGQELVVKRNDEVTISDIE----------NMKPDFLMISPGPCSPN---EAGISMEV-IR 67 (195)
T ss_pred EEEEeCCCccHHHHHHHHHHCCCcEEEEeCCCCCHHHHh----------hCCCCEEEECCCCCChH---hCCCchHH-HH
Confidence 799999999 888999999999999987665422 12569999999999999 77777777 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CC--------ceeEEeccchhcc--ccCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EG--------ERRAMNTFWPLLM--RALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~--------~~~~~~ryHsl~v--~~~p~~l~v~a- 188 (590)
.+..++|+|| |||||+|+.++||+|.+. +.++||.+. ++ ..+.+.+|||+.| .++|++++++|
T Consensus 68 ~~~~~~PvLGIClG~Qlla~~lGg~V~~~-~~~~~G~~~~i~~~~~~lf~~~~~~~~v~~~H~~~v~~~~lp~~~~~~a~ 146 (195)
T PRK07649 68 YFAGKIPIFGVCLGHQSIAQVFGGEVVRA-ERLMHGKTSLMHHDGKTIFSDIPNPFTATRYHSLIVKKETLPDCLEVTSW 146 (195)
T ss_pred HhcCCCCEEEEcHHHHHHHHHcCCEEeeC-CCcccCCeEEEEECCChhhcCCCCCCEEEEechheEecccCCCCeEEEEE
Confidence 8888999999 999999999999999999 789999975 22 2589999999999 37999999999
Q ss_pred ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 189 DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 189 ~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
++++.|||++|+ ||||||||| +.|.+ +++|++..
T Consensus 147 s~~~~v~a~~~~~~~i~gvQFHPE~~~t~~g~~il~nfl~~~ 188 (195)
T PRK07649 147 TEEGEIMAIRHKTLPIEGVQFHPESIMTSHGKELLQNFIRKY 188 (195)
T ss_pred cCCCcEEEEEECCCCEEEEEECCCCCCCccHHHHHHHHHHHh
Confidence 889999999998 999999997 46666 89998754
|
|
| >TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=259.92 Aligned_cols=156 Identities=19% Similarity=0.202 Sum_probs=132.2
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.||.|| .|++++|.++.|++||..+.++.. + + .+|+||||||||+|. +.+...++ ++
T Consensus 2 il~id~~dsft~~~~~~l~~~g~~v~v~~~~~~~~~~~~----~-----~-~~d~iilsgGpg~p~---~~~~~~~~-i~ 67 (188)
T TIGR00566 2 VLMIDNYDSFTYNLVQYFCELGAEVVVKRNDSLTLQEIE----A-----L-LPLLIVISPGPCTPN---EAGISLEA-IR 67 (188)
T ss_pred EEEEECCcCHHHHHHHHHHHcCCceEEEECCCCCHHHHH----h-----c-CCCEEEEcCCCCChh---hcchhHHH-HH
Confidence 799999999 788888999999999987665422 1 2 468999999999998 55556777 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CC--------ceeEEeccchhcc--ccCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EG--------ERRAMNTFWPLLM--RALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~--------~~~~~~ryHsl~v--~~~p~~l~v~a- 188 (590)
++..++|+|| |+|||.|+.++||+|.+. +.+.||+++ ++ +++.+.+|||+.| .++|+.++++|
T Consensus 68 ~~~~~~PvLGIC~G~Qll~~~~GG~v~~~-~~~~~g~~~~v~~~~~~~~~~l~~~~~v~~~H~~~v~~~~l~~~~~v~a~ 146 (188)
T TIGR00566 68 HFAGKLPILGVCLGHQAMGQAFGGDVVRA-NTVMHGKTSEIEHNGAGIFRGLFNPLTATRYHSLVVEPETLPTCFPVTAW 146 (188)
T ss_pred HhccCCCEEEECHHHHHHHHHcCCEEeeC-CCccccceEEEEECCCccccCCCCCcEEEEcccceEecccCCCceEEEEE
Confidence 8877899999 999999999999999999 889999774 11 2589999999999 48999999999
Q ss_pred ecC-CcEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 189 DPE-GSIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 189 ~~~-g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
+++ |.|||++|+ ||||||||+ +.|.. +++|+++
T Consensus 147 s~~~~~v~a~~~~~~~i~gvQfHPE~~~t~~G~~il~nfl~~ 188 (188)
T TIGR00566 147 EEENIEIMAIRHRDLPLEGVQFHPESILSEQGHQLLANFLHR 188 (188)
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCccCCcccHHHHHHHHhC
Confidence 665 599999998 999999998 67777 8888753
|
This model describes the glutamine amidotransferase domain or peptide of the tryptophan-biosynthetic pathway enzyme anthranilate synthase or of the folate biosynthetic pathway enzyme para-aminobenzoate synthase. In at least one case, a single polypeptide from Bacillus subtilis was shown to have both functions. This model covers a subset of the sequences described by the pfam model GATase. |
| >COG0213 DeoA Thymidine phosphorylase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-30 Score=267.35 Aligned_cols=309 Identities=19% Similarity=0.211 Sum_probs=230.9
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|+..++|+|..+|+.||.+|..++++.+. +|+++|.|++||+||..++|+|.+|++.++.||++....+++.+
T Consensus 2 ~~~v~iI~KKrdG~~L~~~EI~~~i~~~~-------~~~i~D~Q~sAf~mAi~f~gM~~~E~~~lT~AMv~SGe~ld~~~ 74 (435)
T COG0213 2 MRSVEIIRKKRDGKALSKEEIEFFINGYV-------NGTIPDYQISAFLMAIFFRGMTMDEIAALTMAMVDSGEVLDLSD 74 (435)
T ss_pred CchHHHHHHhcccccCCHHHHHHHHHHHh-------cCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCEEeecc
Confidence 56789999999999999999999999999 99999999999999999999999999999999999998888765
Q ss_pred C--CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhcc
Q 007779 293 V--KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (590)
Q Consensus 293 ~--~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g 369 (590)
. +.+|.|+|||-|.++..+ ++.++|+||++|+|..+|++++.+|+ .|.||.+ |++++++.++..+.+.++|
T Consensus 75 ~~~~~vDKHStGGVgdk~sL~----l~PiVAA~Gl~VpK~SgRgLghtGGT--~DklEsi~g~~~~~~e~~fi~~~~~~g 148 (435)
T COG0213 75 IPGPVVDKHSTGGVGDKTSLI----LVPIVAAAGLPVPKMSGRGLGHTGGT--LDKLESIPGVNLELDEIKFIEQVKDNG 148 (435)
T ss_pred CCCceecccCCCCCCcccchh----HHHHHHhcCCcccccccCccccCccc--hhhhhccCCcccCcCHHHHHHHhhcCC
Confidence 3 479999999999654333 66699999999999999999999999 9999999 9999999999999999843
Q ss_pred CceEeecchhhChHhHHHHhhhcccC-CCC-CCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEE-E
Q 007779 370 IGFAYVSLREARPSLYSLIGLREHIK-KRP-PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLV-V 446 (590)
Q Consensus 370 ~gf~fl~a~~~~Pal~~l~~vR~~Lg-~Rt-PL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alV-V 446 (590)
. ++|--+.++.|+.++++.+|+.++ +.+ ||.... |- ..++| .|.+..++ |
T Consensus 149 ~-aiiGqs~~LaPADkklyalrdvtaTVdsipLiasS-----------------IM----SKKlA-----~G~~~ivlDV 201 (435)
T COG0213 149 V-AIIGQSGNLAPADKKLYALRDVTATVDSIPLIASS-----------------IM----SKKLA-----AGADAIVLDV 201 (435)
T ss_pred e-EEEeCcCCcCcccceeEEeeeccccCCcHHHHHHH-----------------HH----HHHHh-----ccCCcEEEEe
Confidence 2 334434589999999999999998 444 666432 11 12233 36544433 5
Q ss_pred ecCCCccccccccccccccCCCCccccccccccCcceeEe--cCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHH
Q 007779 447 KGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE--GDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIEL 524 (590)
Q Consensus 447 ~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~--~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~ 524 (590)
+=-.|..--+.. .. .+|. ...+-. .-|+... ..+ .|+ ..++.+..++ +-.++.
T Consensus 202 kvG~GAfmkt~~-~a------------~~LA---~~mv~ig~~~g~~t~---a~i--Tdm---~QPLG~aiGn-alEv~E 256 (435)
T COG0213 202 KVGSGAFMKTVE-DA------------RELA---KAMVEIGKGLGRKTT---AVI--TDM---NQPLGRAIGN-ALEVRE 256 (435)
T ss_pred cccCCCccCCHH-HH------------HHHH---HHHHHHHHhcCCeEE---EEE--cCC---CCchhhhhcc-HHHHHH
Confidence 532454211100 00 0000 011100 1122111 112 122 1233332233 444455
Q ss_pred HHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 525 GLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 525 ~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
..++|.|+ +.+..+.++.-|+.+|.+.| .+.+.+||.+++++.|+||+|++||.+|++.|+.
T Consensus 257 al~~L~g~~p~dL~e~~l~la~~mL~~~g--~a~~~~~a~~~~~~vl~sGkA~ekF~~~v~aQGG 319 (435)
T COG0213 257 ALETLKGKGPPDLVELSLALAGEMLEMTG--LAKTGEEAKAKAREVLESGKALEKFKEIVAAQGG 319 (435)
T ss_pred HHHHHhccCCccHHHHHHHHHHHHHHHcC--ccCccHHHHHHHHHHHhCchHHHHHHHHHHHhCC
Confidence 67899996 45689999999999998865 7899999999999999999999999999999974
|
|
| >PRK06774 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=254.43 Aligned_cols=155 Identities=21% Similarity=0.222 Sum_probs=130.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.||.|| +||+++|.+++|++||.++.+++.. + .||+||||||||+|. +.+...++ ++
T Consensus 2 il~id~~dsf~~nl~~~l~~~~~~~~v~~~~~~~~~~~~~---------~-~~~~iilsgGP~~~~---~~~~~~~~-i~ 67 (191)
T PRK06774 2 LLLIDNYDSFTYNLYQYFCELGTEVMVKRNDELQLTDIEQ---------L-APSHLVISPGPCTPN---EAGISLAV-IR 67 (191)
T ss_pred EEEEECCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHh---------c-CCCeEEEcCCCCChH---hCCCchHH-HH
Confidence 799999999 8899999999999999887765321 1 568999999999998 67777787 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----------C--CceeEEeccchhcc--ccCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----------E--GERRAMNTFWPLLM--RALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------~--~~~~~~~ryHsl~v--~~~p~~l~v~a- 188 (590)
.+..++|+|| |+|||.|+.+|||+|.+. +.+.||.++ . ...+.+.+|||+.| .++|++++++|
T Consensus 68 ~~~~~~PiLGIC~G~Qlla~~~GG~v~~~-~~~~~G~~~~~~~~~~~lf~~l~~~~~v~~~Hs~~v~~~~lp~~~~vlA~ 146 (191)
T PRK06774 68 HFADKLPILGVCLGHQALGQAFGARVVRA-RQVMHGKTSAICHSGQGVFRGLNQPLTVTRYHSLVIAADSLPGCFELTAW 146 (191)
T ss_pred HhcCCCCEEEECHHHHHHHHHhCCEEEeC-CcceecceEEEEecCchhhcCCCCCcEEEEeCcceeeccCCCCCeEEEEE
Confidence 8888999999 999999999999999999 678899654 1 13689999999999 47899999999
Q ss_pred ec-CC---cEEEEEcC----CCCcccCCC---chhhH-HHHHHH
Q 007779 189 DP-EG---SIMGGGGS----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 189 ~~-~g---~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
++ ++ .|||++|+ ||||||||+ +.|.+ +++|++
T Consensus 147 s~~d~~~~~i~~~~~~~~~i~GvQfHPE~~~~~~G~~i~~nf~~ 190 (191)
T PRK06774 147 SERGGEMDEIMGIRHRTLPLEGVQFHPESILSEQGHQLLDNFLK 190 (191)
T ss_pred eCCCCCcceEEEEEeCCCCEEEEEECCCcCCCccHHHHHHHHhh
Confidence 55 33 59999997 999999998 55665 777764
|
|
| >PLN02335 anthranilate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=253.60 Aligned_cols=159 Identities=16% Similarity=0.179 Sum_probs=133.9
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.+|+++|+.|| .+|+++|+++.|+|+|.++.++.. ...+|+||||||||+|. |.+..++.
T Consensus 19 ~~ilviD~~dsft~~i~~~L~~~g~~~~v~~~~~~~~~~~~----------~~~~d~iVisgGPg~p~---d~~~~~~~- 84 (222)
T PLN02335 19 GPIIVIDNYDSFTYNLCQYMGELGCHFEVYRNDELTVEELK----------RKNPRGVLISPGPGTPQ---DSGISLQT- 84 (222)
T ss_pred CcEEEEECCCCHHHHHHHHHHHCCCcEEEEECCCCCHHHHH----------hcCCCEEEEcCCCCChh---hccchHHH-
Confidence 37899999999 889999999999999977665321 12468999999999998 77777888
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCC-CcCccccC------C---------ceeEEeccchhccc--cCCCc
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAF-PEATQWSE------G---------ERRAMNTFWPLLMR--ALPPD 183 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~-~~hG~~s~------~---------~~~~~~ryHsl~v~--~~p~~ 183 (590)
++.+..++|+|| |||||+|+.++||+|.++ +. ++||.+.. + ..+.+.+||++.|+ .+|+.
T Consensus 85 ~~~~~~~~PiLGIClG~QlLa~alGg~v~~~-~~~~~~G~~~~v~~~~~~~~~Lf~~l~~~~~v~~~H~~~v~~~~lp~~ 163 (222)
T PLN02335 85 VLELGPLVPLFGVCMGLQCIGEAFGGKIVRS-PFGVMHGKSSPVHYDEKGEEGLFSGLPNPFTAGRYHSLVIEKDTFPSD 163 (222)
T ss_pred HHHhCCCCCEEEecHHHHHHHHHhCCEEEeC-CCccccCceeeeEECCCCCChhhhCCCCCCEEEechhheEecccCCCC
Confidence 788877899999 999999999999999999 54 58988761 1 25889999999994 78886
Q ss_pred -EEEEe-ecCCcEEEEEcC-----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 184 -VIFIA-DPEGSIMGGGGS-----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 184 -l~v~a-~~~g~im~~~h~-----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
++++| ++||.||+++|+ ||||||||+ +.|.. +++|++.+
T Consensus 164 ~~~v~a~~~~~~v~ai~~~~~~~i~GvQfHPE~~~~~~g~~i~~nF~~~~ 213 (222)
T PLN02335 164 ELEVTAWTEDGLIMAARHRKYKHIQGVQFHPESIITTEGKTIVRNFIKII 213 (222)
T ss_pred ceEEEEEcCCCCEEEEEecCCCCEEEEEeCCCCCCChhHHHHHHHHHHHH
Confidence 99999 889999999997 899999998 56666 88888654
|
|
| >CHL00101 trpG anthranilate synthase component 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=247.69 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=131.3
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.||-|| .+|+++|.++.|+++|.++.+... ...+|+||||||||+|. +.+...++ ++
T Consensus 2 iliid~~dsft~~l~~~l~~~g~~~~v~~~~~~~~~~~~----------~~~~dgiiisgGpg~~~---~~~~~~~i-~~ 67 (190)
T CHL00101 2 ILIIDNYDSFTYNLVQSLGELNSDVLVCRNDEIDLSKIK----------NLNIRHIIISPGPGHPR---DSGISLDV-IS 67 (190)
T ss_pred EEEEECCCchHHHHHHHHHhcCCCEEEEECCCCCHHHHh----------hCCCCEEEECCCCCChH---HCcchHHH-HH
Confidence 799999999 778888999999999977664311 12579999999999998 66666666 77
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccc--cCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMR--ALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~--~~p~~l~v~a- 188 (590)
.+..++|+|| |+|||+|+.++||+|.+. +.++||.+. + ...+.+.+||++.|+ ++|++++++|
T Consensus 68 ~~~~~~PiLGIClG~Qlla~~~Gg~V~~~-~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~~~lp~~~~vla~ 146 (190)
T CHL00101 68 SYAPYIPILGVCLGHQSIGYLFGGKIIKA-PKPMHGKTSKIYHNHDDLFQGLPNPFTATRYHSLIIDPLNLPSPLEITAW 146 (190)
T ss_pred HhcCCCcEEEEchhHHHHHHHhCCEEEEC-CCcccCceeeEeeCCcHhhccCCCceEEEcchhheeecccCCCceEEEEE
Confidence 7788899999 999999999999999999 888999875 1 125899999999995 7999999999
Q ss_pred ecCCcEEEEEcC-----CCCcccCCC---chhhH-HHHHHH
Q 007779 189 DPEGSIMGGGGS-----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 189 ~~~g~im~~~h~-----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
+++|.+||++|+ ||||||||+ +.|.. +++|++
T Consensus 147 s~~~~v~a~~~~~~~~i~gvQfHPE~~~~~~g~~l~~nf~~ 187 (190)
T CHL00101 147 TEDGLIMACRHKKYKMLRGIQFHPESLLTTHGQQILRNFLS 187 (190)
T ss_pred cCCCcEEEEEeCCCCCEEEEEeCCccCCChhHHHHHHHHHh
Confidence 889999999996 799999998 45665 777765
|
|
| >PRK05637 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=250.75 Aligned_cols=158 Identities=15% Similarity=0.164 Sum_probs=130.9
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|++.|+.|| ++|+++|..++|+++|. +.++.. ...||+||||||||+|. |++...++ +
T Consensus 3 ~il~iD~~dsf~~nl~~~l~~~g~~~~v~~~~~-~~~~l~----------~~~~~~iIlsgGPg~~~---d~~~~~~l-i 67 (208)
T PRK05637 3 HVVLIDNHDSFVYNLVDAFAVAGYKCTVFRNTV-PVEEIL----------AANPDLICLSPGPGHPR---DAGNMMAL-I 67 (208)
T ss_pred EEEEEECCcCHHHHHHHHHHHCCCcEEEEeCCC-CHHHHH----------hcCCCEEEEeCCCCCHH---HhhHHHHH-H
Confidence 6899999999 78889999999999983 343311 12568999999999998 77777777 7
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc--------------CC--------------ceeEEeccch
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------------EG--------------ERRAMNTFWP 174 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------------~~--------------~~~~~~ryHs 174 (590)
+.+.+++|+|| |||||.|+.++||+|.+. . ++||.+. .+ +++.+++||+
T Consensus 68 ~~~~~~~PiLGIClG~Qlla~alGG~V~~~-~-~~~G~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~V~~~H~ 145 (208)
T PRK05637 68 DRTLGQIPLLGICLGFQALLEHHGGKVEPC-G-PVHGTTDNMILTDAGVQSPVFAGLATDVEPDHPEIPGRKVPIARYHS 145 (208)
T ss_pred HHHhCCCCEEEEcHHHHHHHHHcCCeeccC-C-cccceEEEeEECCCCCCCcccCCCCcccccccccccCCceEEEEech
Confidence 77667899999 999999999999999987 4 5777642 01 2478999999
Q ss_pred hccccCCCcEEEEe-ecC---CcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhc
Q 007779 175 LLMRALPPDVIFIA-DPE---GSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLA 224 (590)
Q Consensus 175 l~v~~~p~~l~v~a-~~~---g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~ 224 (590)
+.|..+|++++++| +++ +.+|+++|+ ||||||||| +.|+. |+|||++++.
T Consensus 146 ~~v~~lp~~~~vlA~s~~~~~~v~~a~~~~~~~~~GvQfHPE~~~T~~G~~il~nfl~~~~~ 207 (208)
T PRK05637 146 LGCVVAPDGMESLGTCSSEIGPVIMAAETTDGKAIGLQFHPESVLSPTGPIILSRCVEQLLA 207 (208)
T ss_pred hhhhcCCCCeEEEEEecCCCCCEEEEEEECCCCEEEEEeCCccCcCCCHHHHHHHHHHHHhc
Confidence 99999999999999 544 368999876 999999999 77887 9999998764
|
|
| >PRK06895 putative anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=244.63 Aligned_cols=155 Identities=15% Similarity=0.131 Sum_probs=132.3
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
++|++.||.|| ++|+++|.++.|+++|..+.++ ++.+|+|||+||||.|. +.+.+.++
T Consensus 2 ~~iliid~~dsf~~~i~~~l~~~g~~~~v~~~~~~~~~~------------l~~~d~iIi~gGp~~~~---~~~~~~~~- 65 (190)
T PRK06895 2 TKLLIINNHDSFTFNLVDLIRKLGVPMQVVNVEDLDLDE------------VENFSHILISPGPDVPR---AYPQLFAM- 65 (190)
T ss_pred cEEEEEeCCCchHHHHHHHHHHcCCcEEEEECCccChhH------------hccCCEEEECCCCCChH---HhhHHHHH-
Confidence 58999999999 8899999999999998643322 45679999999999997 66777777
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----C--------CceeEEeccchhccc--cCCCcEEE
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----E--------GERRAMNTFWPLLMR--ALPPDVIF 186 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~--------~~~~~~~ryHsl~v~--~~p~~l~v 186 (590)
|+.+..++|+|| |||||+|+.++||+|.++ +.+.||++. + .+.+.+.+|||+.+. ++|+.+.+
T Consensus 66 i~~~~~~~PiLGIClG~Qlla~~~Gg~V~~~-~~~~~g~~~~v~~~~~~~l~~~~~~~~~v~~~Hs~~v~~~~lp~~l~~ 144 (190)
T PRK06895 66 LERYHQHKSILGVCLGHQTLCEFFGGELYNL-NNVRHGQQRPLKVRSNSPLFDGLPEEFNIGLYHSWAVSEENFPTPLEI 144 (190)
T ss_pred HHHhcCCCCEEEEcHHHHHHHHHhCCeEeec-CCCccCceEEEEECCCChhhhcCCCceEEEcchhheecccccCCCeEE
Confidence 788878899999 999999999999999998 778999875 1 136789999999995 68999999
Q ss_pred Ee-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHH
Q 007779 187 IA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 187 ~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
++ ++++.+||++|+ ||+|||||+ +.|.. ++||++
T Consensus 145 ~a~~~~~~i~a~~~~~~pi~GvQFHPE~~~~~~g~~il~nf~~ 187 (190)
T PRK06895 145 TAVCDENVVMAMQHKTLPIYGVQFHPESYISEFGEQILRNWLA 187 (190)
T ss_pred EEECCCCcEEEEEECCCCEEEEEeCCCcCCCcchHHHHHHHHh
Confidence 99 778899999997 999999997 56665 888875
|
|
| >PRK08857 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=244.52 Aligned_cols=156 Identities=19% Similarity=0.217 Sum_probs=129.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.||.|| .+|+++|..+.++++|+.+..... . + .+|+||+||||++|. +.+...++ ++
T Consensus 2 il~id~~dsft~~~~~~l~~~g~~~~~~~~~~~~~~~~~----~-----~-~~~~iilsgGp~~~~---~~~~~~~~-i~ 67 (193)
T PRK08857 2 LLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDIDGIE----A-----L-NPTHLVISPGPCTPN---EAGISLQA-IE 67 (193)
T ss_pred EEEEECCCCcHHHHHHHHHHCCCcEEEEECCCCCHHHHh----h-----C-CCCEEEEeCCCCChH---HCcchHHH-HH
Confidence 799999999 778899999999999976543211 0 2 468999999999998 55666777 78
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccc--cCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMR--ALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~--~~p~~l~v~a- 188 (590)
.+..++|+|| |||||.|+.++||+|.+. +.+.||.+. + ...+.+.+|||+.|+ ++|++++++|
T Consensus 68 ~~~~~~PiLGIClG~Qlia~a~Gg~v~~~-~~~~~G~~~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~~~lp~~~~v~a~ 146 (193)
T PRK08857 68 HFAGKLPILGVCLGHQAIAQVFGGQVVRA-RQVMHGKTSPIRHTGRSVFKGLNNPLTVTRYHSLVVKNDTLPECFELTAW 146 (193)
T ss_pred HhcCCCCEEEEcHHHHHHHHHhCCEEEeC-CCceeCceEEEEECCCcccccCCCccEEEEccEEEEEcCCCCCCeEEEEE
Confidence 8888899999 999999999999999999 788999843 1 125889999999985 8999999999
Q ss_pred ec--CC---cEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 189 DP--EG---SIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 189 ~~--~g---~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
++ |+ .|||++|+ ||||||||+ +.|.. +++|+++
T Consensus 147 s~~~~~~~~~i~~~~~~~~pi~gvQfHPE~~~t~~g~~i~~nFl~~ 192 (193)
T PRK08857 147 TELEDGSMDEIMGFQHKTLPIEAVQFHPESIKTEQGHQLLANFLAR 192 (193)
T ss_pred ecCcCCCcceEEEEEeCCCCEEEEeeCCCcCCCcchHHHHHHHHhh
Confidence 54 43 59999998 999999998 56766 8888764
|
|
| >KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=261.10 Aligned_cols=166 Identities=19% Similarity=0.211 Sum_probs=130.8
Q ss_pred ccceeEeeccccH------HHHHHh-CCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHH
Q 007779 47 RRIRLTVKADLDS------ALIDQL-GLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVL 119 (590)
Q Consensus 47 ~~~~~~~~~~~d~------~~~~~l-g~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~ 119 (590)
+|.++++.|+.|| +++.+. |....|++||+-..++....+.. .-++|+||+|||||+|..+++.|++.
T Consensus 13 ~rl~~LlID~YDSyTfNiy~ll~~~~~vp~V~~vh~~~~~~d~~~~l~q-----~~~FDaIVVgPGPG~P~~a~d~gI~~ 87 (767)
T KOG1224|consen 13 PRLRTLLIDNYDSYTFNIYQLLSTINGVPPVVIVHDEWTWEDAYHYLYQ-----DVAFDAIVVGPGPGSPMCAADIGICL 87 (767)
T ss_pred hheeEEEEecccchhhhHHHHHHHhcCCCcEEEEeccccCHHHHHHHhh-----ccccceEEecCCCCCCCcHHHHHHHH
Confidence 3789999999999 444444 77888888886554432211111 22579999999999998889999999
Q ss_pred HHHHHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C----------C--ceeEEeccchhccccCCC
Q 007779 120 DTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E----------G--ERRAMNTFWPLLMRALPP 182 (590)
Q Consensus 120 ~~~i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~----------~--~~~~~~ryHsl~v~~~p~ 182 (590)
++ +.... ++|||| |||||+||.++||.|..+ ..|.||++| + | ..|.++|||||.|+++|-
T Consensus 88 rl-~~~~~-~iPilGICLGfQal~l~hGA~v~~~-n~p~HGrvs~i~~~~~~~f~gi~sg~~~~fK~~RYHSL~in~~pi 164 (767)
T KOG1224|consen 88 RL-LLECR-DIPILGICLGFQALGLVHGAHVVHA-NEPVHGRVSGIEHDGNILFSGIPSGRNSDFKVVRYHSLIINSLPI 164 (767)
T ss_pred HH-HHhcC-CCceeeeehhhHhHhhhcccceecC-CCcccceeeeEEecCcEEEccCCCCCcccceeEEeEEEEecCCch
Confidence 98 87764 899999 999999999999999999 799999998 1 2 279999999999999997
Q ss_pred cE-EEEe-e-cCC--cEEEEEcC----CCCcccCCC---chhhH-HHHHHH
Q 007779 183 DV-IFIA-D-PEG--SIMGGGGS----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 183 ~l-~v~a-~-~~g--~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
++ .+.+ + +|+ .+|++.|+ ||+|||||| +.|.. ++|||.
T Consensus 165 d~l~il~t~~ddng~ilMsi~~~~fPhfG~qyHPES~~s~~g~~lfkNFl~ 215 (767)
T KOG1224|consen 165 DLLPILWTIYDDNGHILMSIMHSSFPHFGLQYHPESIASTYGSQLFKNFLD 215 (767)
T ss_pred hhhcceeEeecCCceEEEEeeccCCCccceeeChHHhhhhhhHHHHHHHHH
Confidence 64 4444 3 333 59999998 999999999 55544 777764
|
|
| >PRK05670 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=230.35 Aligned_cols=156 Identities=19% Similarity=0.233 Sum_probs=129.3
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.|+=|| .+|+++|.++.|+++|..+..... . + .+|+||||||||+|. +++...++ ++
T Consensus 2 iliid~~d~f~~~i~~~l~~~g~~~~v~~~~~~~~~~~~----~-----~-~~dglIlsgGpg~~~---d~~~~~~~-l~ 67 (189)
T PRK05670 2 ILLIDNYDSFTYNLVQYLGELGAEVVVYRNDEITLEEIE----A-----L-NPDAIVLSPGPGTPA---EAGISLEL-IR 67 (189)
T ss_pred EEEEECCCchHHHHHHHHHHCCCcEEEEECCCCCHHHHH----h-----C-CCCEEEEcCCCCChH---HcchHHHH-HH
Confidence 788999998 778888999999999865543311 1 2 369999999999998 77777777 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccc--cCCCcEEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMR--ALPPDVIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~--~~p~~l~v~a- 188 (590)
.+..++|+|| |+|||.|+.++||+|.+. +.+.||.+. . ...+.+.+||++.|. ++|+.++++|
T Consensus 68 ~~~~~~PvLGIClG~Qlla~alGg~v~~~-~~~~~g~~~~v~~~~~~l~~~~~~~~~v~~~H~~~v~~~~lp~~~~~la~ 146 (189)
T PRK05670 68 EFAGKVPILGVCLGHQAIGEAFGGKVVRA-KEIMHGKTSPIEHDGSGIFAGLPNPFTVTRYHSLVVDRESLPDCLEVTAW 146 (189)
T ss_pred HhcCCCCEEEECHHHHHHHHHhCCEEEec-CCcccCceeEEEeCCCchhccCCCCcEEEcchhheeccccCCCceEEEEE
Confidence 8877899999 999999999999999999 788899654 1 125789999999994 5999999999
Q ss_pred ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 189 DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 189 ~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
++++.+||++|+ ||||||||+ +.+.+ +++|++.
T Consensus 147 s~~~~i~a~~~~~~~~~gvQfHPE~~~~~~g~~i~~~F~~~ 187 (189)
T PRK05670 147 TDDGEIMGVRHKELPIYGVQFHPESILTEHGHKLLENFLEL 187 (189)
T ss_pred eCCCcEEEEEECCCCEEEEeeCCCcCCCcchHHHHHHHHHh
Confidence 888999999985 999999998 34555 7777764
|
|
| >PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=256.04 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=117.0
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhcCCCCccc-ccch
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSK 138 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~~~PilG-CLGh 138 (590)
.+|.++|++++|+++|. +.+++. -..+|+||||||||+|. ++....+. ++++.+++|+|| ||||
T Consensus 256 r~L~~~G~~v~VvP~~~-~~~ei~----------~~~pDGIiLSnGPGDP~---~~~~~ie~-ik~l~~~iPIlGICLGh 320 (415)
T PLN02771 256 RRLASYGCKITVVPSTW-PASEAL----------KMKPDGVLFSNGPGDPS---AVPYAVET-VKELLGKVPVFGICMGH 320 (415)
T ss_pred HHHHHcCCeEEEECCCC-CHHHHh----------hcCCCEEEEcCCCCChh---HhhHHHHH-HHHHHhCCCEEEEcHHH
Confidence 56777899999999985 233211 11579999999999998 77888888 888767899999 9999
Q ss_pred HHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhcc--ccCCCcEEEEe-e-cCCcEEEEEcC----CCCc
Q 007779 139 AQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLM--RALPPDVIFIA-D-PEGSIMGGGGS----IGPH 204 (590)
Q Consensus 139 Q~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v--~~~p~~l~v~a-~-~~g~im~~~h~----~gvQ 204 (590)
|+|+.++||+|.|+ ++++||.++ +++...++|||++.| +++|+++++++ + +||+|||++|+ ||||
T Consensus 321 QlLa~AlGGkv~K~-~~Gh~G~n~pV~~~~~~~v~itsqnHg~aVd~~sLp~~~~vt~~nlnDgtvegi~~~~~pi~gVQ 399 (415)
T PLN02771 321 QLLGQALGGKTFKM-KFGHHGGNHPVRNNRTGRVEISAQNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAFPALNVMSLQ 399 (415)
T ss_pred HHHHHhcCCeEEEC-CCCcccceEEEEECCCCCEEEEecCHHHhhccccCCCceEEEEEeCCCCcEEEEEECCCCEEEEE
Confidence 99999999999999 999999987 356778899999999 58999999999 4 79999999999 9999
Q ss_pred ccCCCch
Q 007779 205 YSGNDPR 211 (590)
Q Consensus 205 fHPEs~~ 211 (590)
||||+..
T Consensus 400 FHPEa~p 406 (415)
T PLN02771 400 YHPEASP 406 (415)
T ss_pred cCCCCCC
Confidence 9999843
|
|
| >COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-27 Score=242.24 Aligned_cols=158 Identities=11% Similarity=0.084 Sum_probs=125.4
Q ss_pred ceeEeecc-ccHHHHHHh---CCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 49 IRLTVKAD-LDSALIDQL---GLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 49 ~~~~~~~~-~d~~~~~~l---g~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
.+|.+.|- .-.+.+++| |++++|+.-+. +.+++- + -.||+|+||+|||+|+ .....++. |+
T Consensus 180 ~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~t-~~eeIl----~------~~pDGiflSNGPGDP~---~~~~~i~~-ik 244 (368)
T COG0505 180 KHVVVIDFGVKRNILRELVKRGCRVTVVPADT-SAEEIL----A------LNPDGIFLSNGPGDPA---PLDYAIET-IK 244 (368)
T ss_pred cEEEEEEcCccHHHHHHHHHCCCeEEEEcCCC-CHHHHH----h------hCCCEEEEeCCCCChh---HHHHHHHH-HH
Confidence 35555542 222778887 89999998774 233211 1 2579999999999998 77778888 88
Q ss_pred HhcCCC-Cccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCCcEEEEe--ecCC
Q 007779 125 SAKGDL-KDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPPDVIFIA--DPEG 192 (590)
Q Consensus 125 ~~~~~~-PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~~l~v~a--~~~g 192 (590)
++.+.+ |++| |||||+|+.|+||++.|| +|+|||.+. +|+.+.++++|+++|+ ++++..++|. .+||
T Consensus 245 ~l~~~~iPifGICLGHQllalA~Ga~T~Km-kFGHrG~NhPV~dl~tgrv~ITSQNHGyaVd~~s~~~~~~vth~nlnDg 323 (368)
T COG0505 245 ELLGTKIPIFGICLGHQLLALALGAKTYKM-KFGHRGANHPVKDLDTGRVYITSQNHGYAVDEDSLVETLKVTHVNLNDG 323 (368)
T ss_pred HHhccCCCeEEEcHHHHHHHHhcCCceeec-ccCCCCCCcCcccccCCeEEEEecCCceecChhhcCCCceeEEEeCCCC
Confidence 887765 9999 999999999999999999 999999997 5789999999999994 6776547888 6899
Q ss_pred cEEEEEcC----CCCcccCCC---chhhH--HHHHHHHh
Q 007779 193 SIMGGGGS----IGPHYSGND---PREMR--LVGALREV 222 (590)
Q Consensus 193 ~im~~~h~----~gvQfHPEs---~~~m~--L~~~L~kl 222 (590)
+++|++|+ |+||||||+ |+.-+ +.+|++.+
T Consensus 324 TvEGi~h~~~P~fSVQ~HPEAsPGPhDt~ylFd~Fi~~~ 362 (368)
T COG0505 324 TVEGIRHKDLPAFSVQYHPEASPGPHDTRYLFDEFIELM 362 (368)
T ss_pred CccceecCCCceEEEccCCCCCCCCcccHHHHHHHHHHH
Confidence 99999999 999999998 33222 56666544
|
|
| >PRK07765 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=226.16 Aligned_cols=165 Identities=19% Similarity=0.161 Sum_probs=132.3
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
++|++.|+=|+ .+++++|..+.+++++...... ....++.+|+|||||||++|. +.....++
T Consensus 1 ~~ilv~d~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~--------~~~~~~~~dgliisGGp~~~~---~~~~~~~~- 68 (214)
T PRK07765 1 MRILVVDNYDSFVFNLVQYLGQLGVEAEVWRNDDPRLAD--------EAAVAAQFDGVLLSPGPGTPE---RAGASIDM- 68 (214)
T ss_pred CeEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCcCHHH--------HHHhhcCCCEEEECCCCCChh---hcchHHHH-
Confidence 36788888887 6778889999999998532111 111145689999999999998 56666777
Q ss_pred HHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccc--cCCCcEEE
Q 007779 123 LRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMR--ALPPDVIF 186 (590)
Q Consensus 123 i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~--~~p~~l~v 186 (590)
++.+. .++|+|| |+|||+|+.+|||+|.+. +.++||..+ + .+.+.+.++|++.|. ++|+++++
T Consensus 69 i~~~~~~~~PiLGIC~G~Qlla~a~GG~v~~~-~~~~~g~~~~v~~~~~~~~~~~~~~~~v~~~H~~~v~~~~lp~~~~v 147 (214)
T PRK07765 69 VRACAAAGTPLLGVCLGHQAIGVAFGATVDRA-PELLHGKTSSVHHTGVGVLAGLPDPFTATRYHSLTILPETLPAELEV 147 (214)
T ss_pred HHHHHhCCCCEEEEccCHHHHHHHhCCEEeeC-CCCccCceeEEEECCCccccCCCCccEEEecchheEecccCCCceEE
Confidence 77654 4799999 999999999999999998 888898864 1 236889999999994 89999999
Q ss_pred Ee-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhcCC
Q 007779 187 IA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLAGG 226 (590)
Q Consensus 187 ~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~G~ 226 (590)
+| ++++.+||++|+ ||||||||+ +.|.+ +.+|+..+..-+
T Consensus 148 la~s~~~~vqa~~~~~~~i~gvQfHPE~~~t~~g~~~l~~f~~~~~~~~ 196 (214)
T PRK07765 148 TARTDSGVIMAVRHRELPIHGVQFHPESVLTEGGHRMLANWLTVCGWAP 196 (214)
T ss_pred EEEcCCCcEEEEEeCCCCEEEEeeCCCcccCcchHHHHHHHHHHhcccc
Confidence 99 889999999997 999999996 45666 999996654333
|
|
| >TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-26 Score=240.48 Aligned_cols=158 Identities=11% Similarity=0.074 Sum_probs=124.6
Q ss_pred cceeEeeccccH-----HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 48 RIRLTVKADLDS-----ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 48 ~~~~~~~~~~d~-----~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
+.+|.++|. -. .+|.+.|+.+.|+++|. +.++.. -..+|+||||||||+|. +....+++
T Consensus 173 ~~~i~viD~-G~k~ni~~~L~~~G~~v~vvp~~~-~~~~i~----------~~~pDGIiLSgGPgdp~---~~~~~i~~- 236 (358)
T TIGR01368 173 KKRVVVIDF-GVKQNILRRLVKRGCEVTVVPYDT-DAEEIK----------KYNPDGIFLSNGPGDPA---AVEPAIET- 236 (358)
T ss_pred ccEEEEEeC-CcHHHHHHHHHHCCCEEEEEcCCC-CHHHHH----------hhCCCEEEECCCCCCHH---HHHHHHHH-
Confidence 357887774 33 45677799999999984 333211 01359999999999998 55666777
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCC-CcEEEEe-e-c
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALP-PDVIFIA-D-P 190 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p-~~l~v~a-~-~ 190 (590)
++.+..++|+|| |||||.|+.+|||++.++ ++++||.++ +++.+.+++||++.|+ ++| ++|++++ + +
T Consensus 237 i~~~~~~~PILGIClG~QlLa~a~Gg~v~kl-~~gh~G~nhpV~~~~~~~v~itsqnH~~aV~~~~l~~~~l~vta~~~n 315 (358)
T TIGR01368 237 IRKLLEKIPIFGICLGHQLLALAFGAKTYKM-KFGHRGGNHPVKDLITGRVEITSQNHGYAVDPDSLPAGDLEVTHVNLN 315 (358)
T ss_pred HHHHHcCCCEEEECHHHHHHHHHhCCceecc-CcCcCCCceeeEECCCCcEEEeecCCCcEEcccccCCCceEEEEEECC
Confidence 777666899999 999999999999999999 899999876 3557888899999994 678 6799999 4 7
Q ss_pred CCcEEEEEcC----CCCcccCCCchh----hH-HHHHHHHh
Q 007779 191 EGSIMGGGGS----IGPHYSGNDPRE----MR-LVGALREV 222 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs~~~----m~-L~~~L~kl 222 (590)
||+|||++|+ ||||||||+..+ .. +.+|++.+
T Consensus 316 Dg~Vegi~h~~~pi~gVQfHPE~~~gp~d~~~lF~~F~~~~ 356 (358)
T TIGR01368 316 DGTVEGIRHKDLPVFSVQYHPEASPGPHDTEYLFDEFIDLI 356 (358)
T ss_pred CCcEEEEEECCCCEEEEEECCCCCCCCCChHHHHHHHHHHh
Confidence 8999999998 999999999322 22 66666543
|
This model represents the whole of the small chain of the glutamine-dependent form (EC 6.3.5.5) of carbamoyl phosphate synthase, CPSase II. The C-terminal domain has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (EC 6.3.4.16). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species. |
| >TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=260.86 Aligned_cols=166 Identities=13% Similarity=0.123 Sum_probs=128.8
Q ss_pred ccceeEeeccccH------HHHHHh-C--CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh
Q 007779 47 RRIRLTVKADLDS------ALIDQL-G--LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK 117 (590)
Q Consensus 47 ~~~~~~~~~~~d~------~~~~~l-g--~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~ 117 (590)
++++|++.||.|| +||+++ | .++.|++||....+.. + .++.+|+||||||||+|.++++.+.
T Consensus 4 ~~~~iL~ID~~DSft~nl~~~l~~~~g~~~~v~vv~~d~~~~~~~------~---~l~~~D~VVIspGPG~p~~~~~~~i 74 (742)
T TIGR01823 4 QRLHVLFIDSYDSFTYNVVRLLEQQTDISVHVTTVHSDTFQDQLL------E---LLPLFDAIVVGPGPGNPNNAQDMGI 74 (742)
T ss_pred CCceEEEEeCCcchHHHHHHHHHHhcCCCcEEEEEeCCCCchhhh------h---hhcCCCEEEECCCCCCccchhhhHH
Confidence 3779999999999 788887 3 6789999997542210 1 1446799999999999987777887
Q ss_pred HHHHHHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CCc-------eeEEeccchhccc-cCCCc
Q 007779 118 VLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EGE-------RRAMNTFWPLLMR-ALPPD 183 (590)
Q Consensus 118 ~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~~-------~~~~~ryHsl~v~-~~p~~ 183 (590)
+.++ ++.. ..++|+|| |||||+|+.++||+|.++ +.++||.++ .+. .+.+++|||+.|+ ..|++
T Consensus 75 ~~~i-~~~~~~~~iPvLGIClG~QlLa~a~GG~v~~~-~~~~hG~~~~v~~~~~~lf~gl~~~~v~~~Hs~~v~~~~~~~ 152 (742)
T TIGR01823 75 ISEL-WELANLDEVPVLGICLGFQSLCLAQGADISRL-PTPKHGQVYEMHTNDAAIFCGLFSVKSTRYHSLYANPEGIDT 152 (742)
T ss_pred HHHH-HHhcccCCCcEEEEchhhHHHHhhcCCEEEEC-CCCCcCeEEEEEECCccccCCCCCCceeEEEEEEccCCCCCc
Confidence 7776 6543 23699999 999999999999999999 899999865 111 3789999999995 35555
Q ss_pred --EEEEe-ec-CCcEEEEEcC----CCCcccCCC---chh-hH-HHHHHHHhh
Q 007779 184 --VIFIA-DP-EGSIMGGGGS----IGPHYSGND---PRE-MR-LVGALREVL 223 (590)
Q Consensus 184 --l~v~a-~~-~g~im~~~h~----~gvQfHPEs---~~~-m~-L~~~L~kl~ 223 (590)
+.+++ ++ ++.|||++|+ ||||||||+ +.+ .. +++|++...
T Consensus 153 l~~~~~a~~~~~~~i~ai~h~~~pi~GVQFHPE~~~s~~g~~~Lf~nFl~~~~ 205 (742)
T TIGR01823 153 LLPLCLTEDEEGIILMSAQTKKKPWFGVQYHPESCCSELGSGKLVSNFLKLAF 205 (742)
T ss_pred ceEEEEEEcCCCCeEEEEEEcCCceEEEEeCcccCCCCccHHHHHHHHHHHHH
Confidence 45555 43 3579999998 999999999 343 44 888887654
|
This model represents the fungal clade of a para-aminobenzoate synthesis enzyme, aminodeoxychorismate synthase, which acts on chorismate in a pathway that yields PABA, a precursor of folate. |
| >TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=254.21 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=132.5
Q ss_pred cccceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHH
Q 007779 46 GRRIRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVL 119 (590)
Q Consensus 46 ~~~~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~ 119 (590)
|...+|++.|+-|+ ++|+++|.++.+++++.. .. .+. ...+|+||||||||+|. |.+. .
T Consensus 514 ~~~~~IlVID~gds~~~~l~~~L~~~G~~v~vv~~~~~-~~-----~~~-----~~~~DgLILsgGPGsp~---d~~~-~ 578 (717)
T TIGR01815 514 GEGRRILLVDHEDSFVHTLANYLRQTGASVTTLRHSHA-EA-----AFD-----ERRPDLVVLSPGPGRPA---DFDV-A 578 (717)
T ss_pred CCCCEEEEEECCChhHHHHHHHHHHCCCeEEEEECCCC-hh-----hhh-----hcCCCEEEEcCCCCCch---hccc-H
Confidence 44568999999998 789999999999998842 11 111 23579999999999998 4443 4
Q ss_pred HHHHHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------C-------CceeEEeccchhcc--ccCCCc
Q 007779 120 DTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------E-------GERRAMNTFWPLLM--RALPPD 183 (590)
Q Consensus 120 ~~~i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~-------~~~~~~~ryHsl~v--~~~p~~ 183 (590)
++|-+.+..++|+|| |||||.|+++|||+|.++ +.|+||+++ + +..+.+.+|||+.+ .++|++
T Consensus 579 ~~I~~~~~~~iPvLGICLG~QlLa~a~GG~V~~~-~~p~~G~~~~V~~~~~~~Lf~~lp~~~~v~~~HS~~~~~~~LP~~ 657 (717)
T TIGR01815 579 GTIDAALARGLPVFGVCLGLQGMVEAFGGALDVL-PEPVHGKASRIRVLGPDALFAGLPERLTVGRYHSLFARRDRLPAE 657 (717)
T ss_pred HHHHHHHHCCCCEEEECHHHHHHhhhhCCEEEEC-CCCeeCcceEEEECCCChhhhcCCCCCEEEEECCCCcccccCCCC
Confidence 452334556899999 999999999999999999 899999764 1 23689999999987 579999
Q ss_pred EEEEe-ecCCcEEEEEcC----CCCcccCCC------chhhH-HHHHHHHhhcC
Q 007779 184 VIFIA-DPEGSIMGGGGS----IGPHYSGND------PREMR-LVGALREVLAG 225 (590)
Q Consensus 184 l~v~a-~~~g~im~~~h~----~gvQfHPEs------~~~m~-L~~~L~kl~~G 225 (590)
++++| +++|.+||++|+ ||||||||| ..|+. |+||+..+..+
T Consensus 658 ~~vlA~s~d~~v~Ai~~~~~~i~GVQFHPEsi~T~sg~~G~~ilkNfl~~~~~~ 711 (717)
T TIGR01815 658 LTVTAESADGLIMAIEHRRLPLAAVQFHPESIMTLDGGAGLAMIGNVVDRLAAG 711 (717)
T ss_pred eEEEEEeCCCcEEEEEECCCCEEEEEeCCeeCCccCchhHHHHHHHHHHHHhhc
Confidence 99999 889999999986 999999998 23566 99999888644
|
This model represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium). This enzyme is the first step in the pathway for the biosynthesis of tryprophan from chorismate. |
| >PRK12564 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=236.56 Aligned_cols=157 Identities=10% Similarity=0.065 Sum_probs=124.9
Q ss_pred cceeEeecccc-H---HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 48 RIRLTVKADLD-S---ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 48 ~~~~~~~~~~d-~---~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
..+|.++|.=- . .+|.+.|+.+.|+++|. +.++.. . + .+|+||||||||+|. +....+++ +
T Consensus 177 ~~~I~viD~G~k~nivr~L~~~G~~v~vvp~~~-~~~~i~----~-----~-~~DGIvLSgGPgdp~---~~~~~~~~-i 241 (360)
T PRK12564 177 KYKVVAIDFGVKRNILRELAERGCRVTVVPATT-TAEEIL----A-----L-NPDGVFLSNGPGDPA---ALDYAIEM-I 241 (360)
T ss_pred CCEEEEEeCCcHHHHHHHHHHCCCEEEEEeCCC-CHHHHH----h-----c-CCCEEEEeCCCCChH---HHHHHHHH-H
Confidence 35788888522 1 45667799999999985 333311 0 1 469999999999998 55666777 7
Q ss_pred HHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCCcEEEEe-e-cC
Q 007779 124 RSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPPDVIFIA-D-PE 191 (590)
Q Consensus 124 ~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~~l~v~a-~-~~ 191 (590)
+.+. .++|+|| |||||.|+.++||++.++ ++++||.++ +++.+.+++||++.|+ ++|+++++++ + +|
T Consensus 242 ~~~~~~~~PilGIClG~QlLa~a~Gg~v~kl-~~gh~G~~~pv~~~~~~~~~its~~H~~~V~~~~lp~~l~v~a~~~~D 320 (360)
T PRK12564 242 RELLEKKIPIFGICLGHQLLALALGAKTYKM-KFGHRGANHPVKDLETGKVEITSQNHGFAVDEDSLPANLEVTHVNLND 320 (360)
T ss_pred HHHHHcCCeEEEECHHHHHHHHHhCCcEecc-CCCccCCceeeEECCCCcEEEEecCcccEEcccccCCceEEEEEeCCC
Confidence 7765 4799999 999999999999999999 899999876 3567889999999995 8999999999 5 68
Q ss_pred CcEEEEEcC----CCCcccCCCch----hhH-HHHHHH
Q 007779 192 GSIMGGGGS----IGPHYSGNDPR----EMR-LVGALR 220 (590)
Q Consensus 192 g~im~~~h~----~gvQfHPEs~~----~m~-L~~~L~ 220 (590)
|.|||++|+ ||||||||+.. +.. +.+|++
T Consensus 321 g~iegi~~~~~pi~gVQfHPE~~~gp~d~~~lF~~F~~ 358 (360)
T PRK12564 321 GTVEGLRHKDLPAFSVQYHPEASPGPHDSAYLFDEFVE 358 (360)
T ss_pred CcEEEEEECCCCEEEEEeCCcCCCCCCCHHHHHHHHHH
Confidence 999999997 99999999832 222 666664
|
|
| >CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-25 Score=234.93 Aligned_cols=159 Identities=9% Similarity=0.053 Sum_probs=124.2
Q ss_pred cceeEeeccccH----HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 48 RIRLTVKADLDS----ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 48 ~~~~~~~~~~d~----~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+.+|+++|+=-. .+|+++|+++.|++++. +.++.. . + .+|+||||||||+|. +....++. +
T Consensus 192 ~~~I~viD~g~k~ni~~~L~~~G~~v~vvp~~~-~~~~i~----~-----~-~~dgIilSgGPg~p~---~~~~~i~~-i 256 (382)
T CHL00197 192 QLKIIVIDFGVKYNILRRLKSFGCSITVVPATS-PYQDIL----S-----Y-QPDGILLSNGPGDPS---AIHYGIKT-V 256 (382)
T ss_pred CCEEEEEECCcHHHHHHHHHHCCCeEEEEcCCC-CHHHHh----c-----c-CCCEEEEcCCCCChh---HHHHHHHH-H
Confidence 468999998443 66777899999999984 333211 1 1 579999999999998 66666777 6
Q ss_pred HHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CCceeEEeccchhcc--ccCCC-cEEEEe--ecCC
Q 007779 124 RSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EGERRAMNTFWPLLM--RALPP-DVIFIA--DPEG 192 (590)
Q Consensus 124 ~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~~~~~~~ryHsl~v--~~~p~-~l~v~a--~~~g 192 (590)
+.+ ..++|+|| |||||+|+.++||+|.++ +++++|.+. .++...+.+||++.| +++|. .+++++ .+||
T Consensus 257 ~~~~~~~~PilGIClGhQlLa~a~Gg~v~k~-~~Gh~g~n~pv~~~~~v~itsq~H~~~v~~~sv~~~~~~vt~~~~nDg 335 (382)
T CHL00197 257 KKLLKYNIPIFGICMGHQILSLALEAKTFKL-KFGHRGLNHPSGLNQQVEITSQNHGFAVNLESLAKNKFYITHFNLNDG 335 (382)
T ss_pred HHHHhCCCCEEEEcHHHHHHHHHhCCEEecc-CCCCCCCCEecCCCCceEEeecchheEeeccccCCCCcEEEEEECCCC
Confidence 665 35899999 999999999999999999 899888765 234455569999999 47875 699998 4799
Q ss_pred cEEEEEcC----CCCcccCCC---chhh--HHHHHHHHh
Q 007779 193 SIMGGGGS----IGPHYSGND---PREM--RLVGALREV 222 (590)
Q Consensus 193 ~im~~~h~----~gvQfHPEs---~~~m--~L~~~L~kl 222 (590)
+|||++|+ ||||||||+ +++. -+.+|++.+
T Consensus 336 tvegi~h~~~pi~gVQFHPE~~~gp~d~~~lf~~Fv~~~ 374 (382)
T CHL00197 336 TVAGISHSPKPYFSVQYHPEASPGPHDADYLFEYFIEII 374 (382)
T ss_pred CEEEEEECCCCcEEEeeCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999 999999998 3332 266776654
|
|
| >PRK12838 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=233.74 Aligned_cols=159 Identities=11% Similarity=0.024 Sum_probs=123.6
Q ss_pred ceeEeecc-ccH---HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 49 IRLTVKAD-LDS---ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 49 ~~~~~~~~-~d~---~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
.+|.+.|. +-. .+|.+.|..+.++++|. +.++.. -..+|+||||||||+|. +....++. ++
T Consensus 168 ~~V~viD~G~k~ni~~~L~~~G~~v~vvp~~~-~~~~i~----------~~~~DGIiLsgGPgdp~---~~~~~~~~-i~ 232 (354)
T PRK12838 168 KHVALIDFGYKKSILRSLSKRGCKVTVLPYDT-SLEEIK----------NLNPDGIVLSNGPGDPK---ELQPYLPE-IK 232 (354)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCeEEEEECCC-CHHHHh----------hcCCCEEEEcCCCCChH---HhHHHHHH-HH
Confidence 46777774 112 45667799999999984 232211 01569999999999998 66666777 77
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCC-cEEEEe-e-cCC
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPP-DVIFIA-D-PEG 192 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~-~l~v~a-~-~~g 192 (590)
.+..++|+|| |||||+|+.+|||+|.++ ++++||.++ +++.+.+.+||++.|+ ++|+ .+++++ . +||
T Consensus 233 ~~~~~~PvlGIClG~QlLa~a~Gg~v~kl-~~gh~G~~hpV~~~~~~~~~~ts~~H~~aV~~~sl~~~~l~v~a~~~~Dg 311 (354)
T PRK12838 233 KLISSYPILGICLGHQLIALALGADTEKL-PFGHRGANHPVIDLTTGRVWMTSQNHGYVVDEDSLDGTPLSVRFFNVNDG 311 (354)
T ss_pred HHhcCCCEEEECHHHHHHHHHhCCEEecC-CCCccCCceEEEECCCCeEEEeccchheEecccccCCCCcEEEEEECCCC
Confidence 7655699999 999999999999999999 899999987 2457788899999994 5775 499999 4 799
Q ss_pred cEEEEEcC----CCCcccCCC---ch-hhH-HHHHHHHhh
Q 007779 193 SIMGGGGS----IGPHYSGND---PR-EMR-LVGALREVL 223 (590)
Q Consensus 193 ~im~~~h~----~gvQfHPEs---~~-~m~-L~~~L~kl~ 223 (590)
.|||++|+ ||||||||+ +. +.. +.+|++.+.
T Consensus 312 ~Veai~~~~~pi~gVQfHPE~~~gp~d~~~lF~~F~~~~~ 351 (354)
T PRK12838 312 SIEGLRHKKKPVLSVQFHPEAHPGPHDAEYIFDEFLEMME 351 (354)
T ss_pred eEEEEEECCCCEEEEEeCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999998 999999998 22 333 777776653
|
|
| >cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.4e-25 Score=212.91 Aligned_cols=153 Identities=18% Similarity=0.221 Sum_probs=123.3
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|+++|+.|+ .+++++|+++.++++++..... +. ++.+|+||++||||+|. +......+ ++
T Consensus 1 il~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~-----~~-----~~~~dgvil~gG~~~~~---~~~~~~~i-~~ 66 (184)
T cd01743 1 ILLIDNYDSFTYNLVQYLRELGAEVVVVRNDEITLEE-----LE-----LLNPDAIVISPGPGHPE---DAGISLEI-IR 66 (184)
T ss_pred CEEEeCCCccHHHHHHHHHHcCCceEEEeCCCCCHHH-----Hh-----hcCCCEEEECCCCCCcc---cchhHHHH-HH
Confidence 578888888 7788899999999998643211 01 34679999999999998 33333344 66
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------C------CceeEEeccchhccccCCCc--EEEEe-
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------E------GERRAMNTFWPLLMRALPPD--VIFIA- 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~------~~~~~~~ryHsl~v~~~p~~--l~v~a- 188 (590)
.+..++|+|| |+|||.|+.++||+|.+. +.+.||.+. + +..+.+..+|++.|+.+|.. ++++|
T Consensus 67 ~~~~~~PvlGIC~G~Qlla~~~Gg~v~~~-~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~~~~~~~la~ 145 (184)
T cd01743 67 ALAGKVPILGVCLGHQAIAEAFGGKVVRA-PEPMHGKTSEIHHDGSGLFKGLPQPFTVGRYHSLVVDPDPLPDLLEVTAS 145 (184)
T ss_pred HHhcCCCEEEECHhHHHHHHHhCCEEEeC-CCCCcCceeEEEECCCccccCCCCCcEEEeCcEEEEecCCCCceEEEEEe
Confidence 6667899999 999999999999999999 788888654 1 13678999999999888876 99999
Q ss_pred ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHH
Q 007779 189 DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGA 218 (590)
Q Consensus 189 ~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~ 218 (590)
++++.|||++|+ ||+|||||+ +.|++ |++|
T Consensus 146 ~~~~~v~a~~~~~~~i~gvQfHPE~~~~~~g~~l~~~f 183 (184)
T cd01743 146 TEDGVIMALRHRDLPIYGVQFHPESILTEYGLRLLENF 183 (184)
T ss_pred CCCCeEEEEEeCCCCEEEEeeCCCcCCCcchHHHHHhh
Confidence 888999999987 999999998 66776 6665
|
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the prese |
| >PRK13566 anthranilate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-25 Score=250.74 Aligned_cols=162 Identities=16% Similarity=0.170 Sum_probs=133.8
Q ss_pred cccccceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh
Q 007779 44 LIGRRIRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK 117 (590)
Q Consensus 44 ~~~~~~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~ 117 (590)
..|+..+|++.|+-|+ +||++.|++|+++|++.- .+. +. ...+|+||||||||+|. |.+
T Consensus 522 ~~~~g~~IlvID~~dsf~~~l~~~Lr~~G~~v~vv~~~~~-~~~-----~~-----~~~~DgVVLsgGpgsp~---d~~- 586 (720)
T PRK13566 522 AVGEGKRVLLVDHEDSFVHTLANYFRQTGAEVTTVRYGFA-EEM-----LD-----RVNPDLVVLSPGPGRPS---DFD- 586 (720)
T ss_pred CCCCCCEEEEEECCCchHHHHHHHHHHCCCEEEEEECCCC-hhH-----hh-----hcCCCEEEECCCCCChh---hCC-
Confidence 5666779999999998 889999999999999852 111 11 23579999999999998 544
Q ss_pred HHHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------C-------CceeEEeccchhccc--cC
Q 007779 118 VLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------E-------GERRAMNTFWPLLMR--AL 180 (590)
Q Consensus 118 ~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~-------~~~~~~~ryHsl~v~--~~ 180 (590)
+.++ ++. +..++|||| |||||.|+++|||+|.+. +.++||+++ + ...+.+.+|||+.+. ++
T Consensus 587 ~~~l-I~~a~~~~iPILGIClG~QlLa~alGG~V~~~-~~~~~G~~~~V~v~~~~~Lf~~lp~~~~v~~~Hs~~v~~~~L 664 (720)
T PRK13566 587 CKAT-IDAALARNLPIFGVCLGLQAIVEAFGGELGQL-AYPMHGKPSRIRVRGPGRLFSGLPEEFTVGRYHSLFADPETL 664 (720)
T ss_pred cHHH-HHHHHHCCCcEEEEehhHHHHHHHcCCEEEEC-CCCccCCceEEEECCCCchhhcCCCCCEEEEecceeEeeccC
Confidence 4566 555 455799999 999999999999999999 899999875 1 125789999999884 69
Q ss_pred CCcEEEEe-ecCCcEEEEEcC----CCCcccCCC------chhhH-HHHHHHHh
Q 007779 181 PPDVIFIA-DPEGSIMGGGGS----IGPHYSGND------PREMR-LVGALREV 222 (590)
Q Consensus 181 p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs------~~~m~-L~~~L~kl 222 (590)
|++++++| ++||.|||++|+ ||||||||+ +.|++ |+||++.+
T Consensus 665 p~~~~vlA~s~dg~V~ai~~~~~pi~GVQFHPE~i~t~~~~~G~~ii~nfl~~~ 718 (720)
T PRK13566 665 PDELLVTAETEDGVIMAIEHKTLPVAAVQFHPESIMTLGGDVGLRIIENVVRLL 718 (720)
T ss_pred CCceEEEEEeCCCcEEEEEECCCCEEEEeccCeeCCcCCchhHHHHHHHHHHHh
Confidence 99999999 889999999997 999999999 34776 99998765
|
|
| >cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=207.94 Aligned_cols=135 Identities=10% Similarity=0.056 Sum_probs=111.9
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhcC-CCCccc-ccc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVS 137 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~-~~PilG-CLG 137 (590)
.+++++|..+.++++|. +.++.. .+.+|+|||+||||+|. +.+...++ ++.+.. ++|+|| |+|
T Consensus 14 ~~l~~~G~~~~~~~~~~-~~~~~~----------~~~~dgiil~GG~~~~~---~~~~~~~~-~~~~~~~~~PvlGIC~G 78 (178)
T cd01744 14 RELLKRGCEVTVVPYNT-DAEEIL----------KLDPDGIFLSNGPGDPA---LLDEAIKT-VRKLLGKKIPIFGICLG 78 (178)
T ss_pred HHHHHCCCeEEEEECCC-CHHHHh----------hcCCCEEEECCCCCChh---HhHHHHHH-HHHHHhCCCCEEEECHH
Confidence 67888999999999985 332211 23579999999999998 55667777 776544 599999 999
Q ss_pred hHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCCcEEEEe-e-cCCcEEEEEcC----CCC
Q 007779 138 KAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPPDVIFIA-D-PEGSIMGGGGS----IGP 203 (590)
Q Consensus 138 hQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~~l~v~a-~-~~g~im~~~h~----~gv 203 (590)
||.|+.+|||+|.+. +.++||+++ .++.+.+.+||++.|+ ++|++++++| + +|+.|||++|+ |||
T Consensus 79 ~Q~l~~~~Gg~v~~~-~~~~~g~~~~v~~~~~~~~~~v~~~H~~~v~~~~lp~~~~v~a~s~~~~~i~a~~~~~~~i~Gv 157 (178)
T cd01744 79 HQLLALALGAKTYKM-KFGHRGSNHPVKDLITGRVYITSQNHGYAVDPDSLPGGLEVTHVNLNDGTVEGIRHKDLPVFSV 157 (178)
T ss_pred HHHHHHHcCCceecC-CCCCCCCceeeEEcCCCCcEEEEcCceEEEcccccCCceEEEEEECCCCcEEEEEECCCCeEEE
Confidence 999999999999998 788999875 2346778899999994 7999999999 5 57899999996 999
Q ss_pred cccCCCc
Q 007779 204 HYSGNDP 210 (590)
Q Consensus 204 QfHPEs~ 210 (590)
|||||+.
T Consensus 158 QfHPE~~ 164 (178)
T cd01744 158 QFHPEAS 164 (178)
T ss_pred eeCCCCC
Confidence 9999983
|
This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is |
| >PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-24 Score=207.91 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=125.7
Q ss_pred EeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHH
Q 007779 52 TVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRS 125 (590)
Q Consensus 52 ~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~ 125 (590)
++.|+=|| +.++++|.+++|++++.- ..... + .++.+|+|||||||++|. +.....++ ++.
T Consensus 1 lviD~~~~~~~~l~~~l~~~~~~~~v~~~~~~-~~~~~-----~---~~~~~d~iii~Gg~~~~~---d~~~~~~~-i~~ 67 (192)
T PF00117_consen 1 LVIDNGDSFTHSLVRALRELGIDVEVVRVDSD-FEEPL-----E---DLDDYDGIIISGGPGSPY---DIEGLIEL-IRE 67 (192)
T ss_dssp EEEESSHTTHHHHHHHHHHTTEEEEEEETTGG-HHHHH-----H---HTTTSSEEEEECESSSTT---SHHHHHHH-HHH
T ss_pred CEEeCCHHHHHHHHHHHHHCCCeEEEEECCCc-hhhhh-----h---hhcCCCEEEECCcCCccc---cccccccc-ccc
Confidence 35566666 778889999999999852 11110 0 145789999999999999 67777887 777
Q ss_pred hcC-CCCccc-ccchHHHHhHhCceeeccCC-CCcCcccc----C-------C--ceeEEeccchhcccc---CCCcEEE
Q 007779 126 AKG-DLKDEE-EVSKAQLGAFFSAMTIRANA-FPEATQWS----E-------G--ERRAMNTFWPLLMRA---LPPDVIF 186 (590)
Q Consensus 126 ~~~-~~PilG-CLGhQ~i~~~~G~~v~~~~~-~~~hG~~s----~-------~--~~~~~~ryHsl~v~~---~p~~l~v 186 (590)
+.. ++|+|| |+|||.|+.++|++|.+. + .++||.+. + + +.+.+.+||++.|.. +|+++++
T Consensus 68 ~~~~~~PilGIC~G~Q~la~~~G~~v~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~v~~~~~~p~~~~~ 146 (192)
T PF00117_consen 68 ARERKIPILGICLGHQILAHALGGKVVPS-PEKPHHGGNIPISETPEDPLFYGLPESFKAYQYHSDAVNPDDLLPEGFEV 146 (192)
T ss_dssp HHHTTSEEEEETHHHHHHHHHTTHEEEEE-ESEEEEEEEEEEEEEEEHGGGTTSTSEEEEEEEECEEEEEGHHHHTTEEE
T ss_pred ccccceEEEEEeehhhhhHHhcCCccccc-ccccccccccccccccccccccccccccccccccceeeeccccccccccc
Confidence 655 899999 999999999999999998 5 78888664 1 2 489999999999987 9999999
Q ss_pred Ee-ecCC-cEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 187 IA-DPEG-SIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 187 ~a-~~~g-~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
+| ++++ .+||++|+ ||+|||||. +.++. |++++.|
T Consensus 147 la~s~~~~~~~~~~~~~~~i~g~QfHPE~~~~~~~~~~l~nf~~~ 191 (192)
T PF00117_consen 147 LASSSDGCPIQAIRHKDNPIYGVQFHPEFSSSPGGPQLLKNFFLK 191 (192)
T ss_dssp EEEETTTTEEEEEEECTTSEEEESSBTTSTTSTTHHHHHHHHHHH
T ss_pred ccccccccccccccccccEEEEEecCCcCCCCCCcchhhhheeEe
Confidence 99 7666 89999998 999999998 44455 8888765
|
The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B .... |
| >PRK00758 GMP synthase subunit A; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=202.50 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=119.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCC-CeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQ-AKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~-~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
|++.|+.|+ ++++++|.++.+++++. +.++ ++.. |+|||++|| .+. ......+. +
T Consensus 2 i~iid~~~~~~~~i~~~l~~~g~~~~~~~~~~-~~~~------------l~~~~dgivi~Gg~-~~~---~~~~~~~~-l 63 (184)
T PRK00758 2 IVVVDNGGQYNHLIHRTLRYLGVDAKIIPNTT-PVEE------------IKAFEDGLILSGGP-DIE---RAGNCPEY-L 63 (184)
T ss_pred EEEEECCCchHHHHHHHHHHcCCcEEEEECCC-CHHH------------HhhcCCEEEECCCC-Chh---hccccHHH-H
Confidence 678888877 56778899999999874 2222 3345 899999999 333 45555666 5
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEe-e
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA-D 189 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a-~ 189 (590)
+. .++|+|| |+|||.|+.++||+|.+. +.++||... + .+++.+.++|++.|.++|+.++++| +
T Consensus 64 ~~--~~~PilGIC~G~Q~L~~a~Gg~v~~~-~~~~~g~~~i~~~~~~~l~~~~~~~~~~~~~H~~~v~~l~~~~~~la~~ 140 (184)
T PRK00758 64 KE--LDVPILGICLGHQLIAKAFGGEVGRG-EYGEYALVEVEILDEDDILKGLPPEIRVWASHADEVKELPDGFEILARS 140 (184)
T ss_pred Hh--CCCCEEEEeHHHHHHHHhcCcEEecC-CCceeeeEEEEEcCCChhhhCCCCCcEEEeehhhhhhhCCCCCEEEEEC
Confidence 53 3799999 999999999999999998 788888753 1 2368899999999999999999999 8
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHH
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR-LVGALRE 221 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k 221 (590)
+++.|+|++|+ ||+|||||+ +.|.. +++|++.
T Consensus 141 ~~~~v~a~~~~~~~~~g~QfHPE~~~~~~g~~l~~~f~~~ 180 (184)
T PRK00758 141 DICEVEAMKHKEKPIYGVQFHPEVAHTEYGEEIFKNFLEI 180 (184)
T ss_pred CCCCEEEEEECCCCEEEEEcCCccCCCchHHHHHHHHHHH
Confidence 88999999985 999999997 35665 8888754
|
|
| >PLN02347 GMP synthetase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=225.30 Aligned_cols=167 Identities=13% Similarity=0.017 Sum_probs=129.3
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|+++|+-|+ .+++++|..+.++++|. +.++.. . . .+|+||||+||++|.+.+ .+...+.++
T Consensus 12 ~IlIID~G~~~t~~I~r~lrelgv~~~v~p~~~-~~~~i~----~-----~-~~dgIILsGGP~sv~~~~-~p~~~~~i~ 79 (536)
T PLN02347 12 VVLILDYGSQYTHLITRRVRELGVYSLLLSGTA-SLDRIA----S-----L-NPRVVILSGGPHSVHVEG-APTVPEGFF 79 (536)
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCeEEEEECCC-CHHHHh----c-----C-CCCEEEECCCCCcccccC-CchhhHHHH
Confidence 5899998887 56899999999999983 444321 1 1 468999999999987322 222222224
Q ss_pred HHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C------C--c--eeEEeccchhccccCCCcEEEE
Q 007779 124 RSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E------G--E--RRAMNTFWPLLMRALPPDVIFI 187 (590)
Q Consensus 124 ~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~------~--~--~~~~~ryHsl~v~~~p~~l~v~ 187 (590)
+.+ ..++|+|| |+|||.|+.+|||+|.+. +.++||... . + . .+.++.+||+.|.++|++++++
T Consensus 80 ~~~~~~~iPILGIClG~QlLa~alGG~V~~~-~~~e~G~~~v~i~~~~~Lf~~l~~~~~~~v~~~Hsd~V~~lP~g~~vl 158 (536)
T PLN02347 80 DYCRERGVPVLGICYGMQLIVQKLGGEVKPG-EKQEYGRMEIRVVCGSQLFGDLPSGETQTVWMSHGDEAVKLPEGFEVV 158 (536)
T ss_pred HHHHhcCCcEEEECHHHHHHHHHcCCEEEec-CCcccceEEEEEcCCChhhhcCCCCceEEEEEEEEEEeeeCCCCCEEE
Confidence 443 24799999 999999999999999998 778888775 1 1 1 2788999999999999999999
Q ss_pred e-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhcC-CCCC
Q 007779 188 A-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLAG-GHLG 229 (590)
Q Consensus 188 a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~G-~~Lt 229 (590)
| ++++.|||++|+ ||||||||+ +.|+. |+||+.++..= .+.+
T Consensus 159 A~s~~~~iaai~~~~~~i~GvQFHPE~~~t~~G~~iL~NFl~~ic~~~~~~~ 210 (536)
T PLN02347 159 AKSVQGAVVAIENRERRIYGLQYHPEVTHSPKGMETLRHFLFDVCGVTADWK 210 (536)
T ss_pred EEeCCCcEEEEEECCCCEEEEEccCCCCccchHHHHHHHHHHHHhCcCCCcC
Confidence 9 889999999986 999999998 56777 99999776543 3444
|
|
| >cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=194.87 Aligned_cols=152 Identities=11% Similarity=0.015 Sum_probs=116.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|++.|+=|+ .+|+++|.++.+++++.- .++ + .++.+|+|||++||+++.+.+ .....+.+++
T Consensus 1 i~~iD~g~~~~~~~~~~l~~~G~~~~~~~~~~~-~~~-------~---~~~~~dgvIl~Gg~~~~~~~~-~~~~~~~~~~ 68 (181)
T cd01742 1 ILILDFGSQYTHLIARRVRELGVYSEILPNTTP-LEE-------I---KLKNPKGIILSGGPSSVYEED-APRVDPEIFE 68 (181)
T ss_pred CEEEECCCchHHHHHHHHHhcCceEEEecCCCC-hhh-------h---cccCCCEEEECCCcccccccc-cchhhHHHHh
Confidence 356676666 668888999999999841 110 0 155679999999999987432 2222233122
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEe-ec
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA-DP 190 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a-~~ 190 (590)
.++|+|| |+|||+|+.++||+|.+. +.+++|... . ...+.+..+|++.|..+|++++++| ++
T Consensus 69 ---~~~PilGIC~G~Qll~~~~gg~v~~~-~~~~~G~~~v~~~~~~~l~~~~~~~~~~~~~H~~~v~~l~~~~~~la~~~ 144 (181)
T cd01742 69 ---LGVPVLGICYGMQLIAKALGGKVERG-DKREYGKAEIEIDDSSPLFEGLPDEQTVWMSHGDEVVKLPEGFKVIASSD 144 (181)
T ss_pred ---cCCCEEEEcHHHHHHHHhcCCeEEeC-CCCcceEEEEEecCCChhhcCCCCceEEEcchhhhhhhcCCCcEEEEeCC
Confidence 3799999 999999999999999998 788888554 1 1257888999999999999999999 77
Q ss_pred CCcEEEEEcC----CCCcccCCC---chhhH-HHHH
Q 007779 191 EGSIMGGGGS----IGPHYSGND---PREMR-LVGA 218 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~ 218 (590)
++.|+|++|+ ||+|||||. +.|++ |++|
T Consensus 145 ~~~i~a~~~~~~~~~g~QfHPE~~~~~~g~~ll~~f 180 (181)
T cd01742 145 NCPVAAIANEEKKIYGVQFHPEVTHTEKGKEILKNF 180 (181)
T ss_pred CCCEEEEEeCCCcEEEEEcCCccccCcChHHHHHhh
Confidence 8999999986 999999998 36676 6655
|
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophospahte to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-22 Score=192.48 Aligned_cols=155 Identities=10% Similarity=-0.012 Sum_probs=120.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|+++|+=|+ +.++++|+++.+++++. +.++.. . .+ +|+|||++||+++.+.. ..+. ++
T Consensus 1 i~iiD~g~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~~~----~-----~~-~~glii~Gg~~~~~~~~----~~~~-i~ 64 (188)
T TIGR00888 1 ILVLDFGSQYTQLIARRLRELGVYSELVPNTT-PLEEIR----E-----KN-PKGIILSGGPSSVYAEN----APRA-DE 64 (188)
T ss_pred CEEEECCchHHHHHHHHHHHcCCEEEEEeCCC-CHHHHh----h-----cC-CCEEEECCCCCCcCcCC----chHH-HH
Confidence 356677676 55888999999999985 222211 1 22 46999999999987432 2344 44
Q ss_pred H-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----C-------CceeEEeccchhccccCCCcEEEEe-e
Q 007779 125 S-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----E-------GERRAMNTFWPLLMRALPPDVIFIA-D 189 (590)
Q Consensus 125 ~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~-------~~~~~~~ryHsl~v~~~p~~l~v~a-~ 189 (590)
. +..++|+|| |+|||+|+.++||+|.+. +.+++|... . ++.+.+..+|++.|.++|+.++++| +
T Consensus 65 ~~~~~~~PilGIC~G~Qll~~~lgg~v~~~-~~~~~g~~~v~~~~~~~l~~~~~~~~~~~~~H~~~v~~l~~~~~vla~~ 143 (188)
T TIGR00888 65 KIFELGVPVLGICYGMQLMAKQLGGEVGRA-EKREYGKAELEILDEDDLFRGLPDESTVWMSHGDKVKELPEGFKVLATS 143 (188)
T ss_pred HHHhCCCCEEEECHHHHHHHHhcCceEecC-CCccceeEEEEEecCCHhhcCCCCCcEEEeEccceeecCCCCCEEEEEC
Confidence 4 445799999 999999999999999998 788888643 1 2368888999999999999999999 7
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
+++.++|++++ ||+|||||. +.|++ |++|+..+
T Consensus 144 ~~~~v~a~~~~~~~~~g~QfHPE~~~~~~g~~i~~~f~~~~ 184 (188)
T TIGR00888 144 DNCPVAAMAHEEKPIYGVQFHPEVTHTEYGNELLENFVYDV 184 (188)
T ss_pred CCCCeEEEEECCCCEEEEeeCCccCCChhhHHHHHHHHHHh
Confidence 78899999987 999999998 35777 88888743
|
separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. |
| >PRK06490 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=190.50 Aligned_cols=159 Identities=12% Similarity=0.015 Sum_probs=117.1
Q ss_pred cceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh-hhHH
Q 007779 48 RIRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA-FKVL 119 (590)
Q Consensus 48 ~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~-g~~~ 119 (590)
+++|+++.+.++ .++++.|.++++++++.=.. .+. .++.+|+|||++||+++.+..+. ....
T Consensus 7 ~~~vlvi~h~~~~~~g~l~~~l~~~g~~~~v~~~~~~~~------~p~----~l~~~dgvii~Ggp~~~~d~~~wi~~~~ 76 (239)
T PRK06490 7 KRPVLIVLHQERSTPGRVGQLLQERGYPLDIRRPRLGDP------LPD----TLEDHAGAVIFGGPMSANDPDDFIRREI 76 (239)
T ss_pred CceEEEEecCCCCCChHHHHHHHHCCCceEEEeccCCCC------CCC----cccccCEEEEECCCCCCCCCchHHHHHH
Confidence 568999988886 77888899999998752100 111 15678999999999998754332 2245
Q ss_pred HHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCc-Ccccc------CC-----ceeEEeccchhccccCCCcEE
Q 007779 120 DTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPE-ATQWS------EG-----ERRAMNTFWPLLMRALPPDVI 185 (590)
Q Consensus 120 ~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~-hG~~s------~~-----~~~~~~ryHsl~v~~~p~~l~ 185 (590)
++ |+. +..++|+|| |+|||+|+.++||+|.+. +.+. +-++. ++ .+..+..+|+.. ..+|++++
T Consensus 77 ~~-i~~~~~~~~PvLGIC~G~Qlla~alGG~V~~~-~~G~~e~G~~~i~~~~~~~~~~~~~~~~~~~H~d~-~~lP~~~~ 153 (239)
T PRK06490 77 DW-ISVPLKENKPFLGICLGAQMLARHLGARVAPH-PDGRVEIGYYPLRPTEAGRALMHWPEMVYHWHREG-FDLPAGAE 153 (239)
T ss_pred HH-HHHHHHCCCCEEEECHhHHHHHHHcCCEeecC-CCCCCccceEEeEECCCcccccCCCCEEEEECCcc-ccCCCCCE
Confidence 66 554 456799999 999999999999999998 5432 22222 12 134566679988 68999999
Q ss_pred EEe-ecCCcEEEEEcC---CCCcccCCCchhhHHHHHHH
Q 007779 186 FIA-DPEGSIMGGGGS---IGPHYSGNDPREMRLVGALR 220 (590)
Q Consensus 186 v~a-~~~g~im~~~h~---~gvQfHPEs~~~m~L~~~L~ 220 (590)
++| ++++.+||+++. ||+|||||....+ +.+++.
T Consensus 154 ~LA~s~~~~~qa~~~~~~v~g~QfHPE~~~~~-~~~~i~ 191 (239)
T PRK06490 154 LLATGDDFPNQAFRYGDNAWGLQFHPEVTRAM-MHRWVV 191 (239)
T ss_pred EEEeCCCCCeEEEEeCCCEEEEeeCccCCHHH-HHHHHH
Confidence 999 788999999987 9999999997544 344443
|
|
| >PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-20 Score=183.98 Aligned_cols=149 Identities=13% Similarity=0.140 Sum_probs=106.7
Q ss_pred ceeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHH
Q 007779 49 IRLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVL 119 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~ 119 (590)
++|.+.| |+|| ++|+++|+++.++||++ + ++..|+||| ||||+|...-+. ....
T Consensus 1 m~i~iid~g~gn~~s~~~~l~~~g~~~~~v~~~~----~------------~~~~d~iIl-PG~G~~~~~~~~l~~~~l~ 63 (196)
T PRK13170 1 MNVVIIDTGCANLSSVKFAIERLGYEPVVSRDPD----V------------ILAADKLFL-PGVGTAQAAMDQLRERELI 63 (196)
T ss_pred CeEEEEeCCCchHHHHHHHHHHCCCeEEEECCHH----H------------hCCCCEEEE-CCCCchHHHHHHHHHcChH
Confidence 4688999 9999 89999999999998862 1 334588998 999999822111 2345
Q ss_pred HHHHHHhcCCCCccc-ccchHHHHhHh---C---------ceeeccC----CCCcCcccc----C--------CceeEEe
Q 007779 120 DTILRSAKGDLKDEE-EVSKAQLGAFF---S---------AMTIRAN----AFPEATQWS----E--------GERRAMN 170 (590)
Q Consensus 120 ~~~i~~~~~~~PilG-CLGhQ~i~~~~---G---------~~v~~~~----~~~~hG~~s----~--------~~~~~~~ 170 (590)
+. ++++ ++|||| |+|||.|+.++ | ++|.|.+ +.|+.|-.. + .+.+.+.
T Consensus 64 ~~-i~~~--~~PilGIClG~Qll~~~~~~~~~~~~lg~~~g~v~~~~~~~~~~p~~G~~~v~~~~~~~l~~~l~~~~~v~ 140 (196)
T PRK13170 64 DL-IKAC--TQPVLGICLGMQLLGERSEESGGVDCLGIIDGPVKKMTDFGLPLPHMGWNQVTPQAGHPLFQGIEDGSYFY 140 (196)
T ss_pred HH-HHHc--CCCEEEECHHHHHHhhhcccCCCCCCcccccEEEEECCCCCCCCCccccceeEeCCCChhhhCCCcCCEEE
Confidence 55 5544 599999 99999999998 3 4666641 234444321 1 2368999
Q ss_pred ccchhccccCCCcEEEEe-ecCCcEEEEEcC----CCCcccCCC--chhhH-HHHHHH
Q 007779 171 TFWPLLMRALPPDVIFIA-DPEGSIMGGGGS----IGPHYSGND--PREMR-LVGALR 220 (590)
Q Consensus 171 ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs--~~~m~-L~~~L~ 220 (590)
+|||+. +|++..++| ++.|..|...+. ||+|||||+ +.|+. |+|||+
T Consensus 141 ~~Hs~~---lp~~~~~la~s~~~~~~~~~~~~~~i~G~QFHPE~~~~~G~~~l~nfl~ 195 (196)
T PRK13170 141 FVHSYA---MPVNEYTIAQCNYGEPFSAAIQKDNFFGVQFHPERSGAAGAQLLKNFLE 195 (196)
T ss_pred EECeee---cCCCCcEEEEecCCCeEEEEEEcCCEEEEECCCCCcccccHHHHHHHhh
Confidence 999985 466666778 666776655553 999999998 66776 888764
|
|
| >CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-20 Score=185.92 Aligned_cols=148 Identities=9% Similarity=-0.072 Sum_probs=100.5
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc----hhhhhHHHHHHHHhcCC
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE----DEAFKVLDTILRSAKGD 129 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~----~~~g~~~~~~i~~~~~~ 129 (590)
|+-| ++++.+|.++.++++++ + ++.+|+|| +||||+|... .+.+.. +.|.+.+..+
T Consensus 13 N~~sl~~al~~~g~~v~vv~~~~----~------------l~~~d~iI-lPG~g~~~~~~~~l~~~gl~-~~i~~~~~~~ 74 (210)
T CHL00188 13 NLHSVSRAIQQAGQQPCIINSES----E------------LAQVHALV-LPGVGSFDLAMKKLEKKGLI-TPIKKWIAEG 74 (210)
T ss_pred cHHHHHHHHHHcCCcEEEEcCHH----H------------hhhCCEEE-ECCCCchHHHHHHHHHCCHH-HHHHHHHHcC
Confidence 5555 88999999999998752 1 22347666 7999998611 011333 3425556678
Q ss_pred CCccc-ccchHHHHhH-----------hCceeeccC-----CCCcCcccc----------------C--CceeEEeccch
Q 007779 130 LKDEE-EVSKAQLGAF-----------FSAMTIRAN-----AFPEATQWS----------------E--GERRAMNTFWP 174 (590)
Q Consensus 130 ~PilG-CLGhQ~i~~~-----------~G~~v~~~~-----~~~~hG~~s----------------~--~~~~~~~ryHs 174 (590)
+|+|| |||||.|++. +.|+|.+++ +.|+.|-+. . .+.+.+.+|||
T Consensus 75 ~pvlGIClG~Qll~~~~~~~~~~glg~~~G~v~~~~~~~~~~~p~~Gw~~v~~~~~~~~~~~~~lf~~l~~~~~v~~~HS 154 (210)
T CHL00188 75 NPFIGICLGLHLLFETSEEGKEEGLGIYKGQVKRLKHSPVKVIPHMGWNRLECQNSECQNSEWVNWKAWPLNPWAYFVHS 154 (210)
T ss_pred CCEEEECHHHHHHhhccccCCcCCccceeEEEEECCCCCCCccCccCCccceecCCcccccCChhhcCCCCCCEEEEeCc
Confidence 99999 9999999987 456666662 234445110 1 23678999999
Q ss_pred hccc-cCCCcEEEEe-e-cCCcEEEEEcC--CCCcccCCC--chhhH-HHHHHHH
Q 007779 175 LLMR-ALPPDVIFIA-D-PEGSIMGGGGS--IGPHYSGND--PREMR-LVGALRE 221 (590)
Q Consensus 175 l~v~-~~p~~l~v~a-~-~~g~im~~~h~--~gvQfHPEs--~~~m~-L~~~L~k 221 (590)
+.|. .-+..+..++ . .++.+|++++. ||||||||+ +.|.. |+|||+|
T Consensus 155 ~~v~p~~~~~l~~t~~~~~~~~v~a~~~~~i~GvQFHPE~s~~~G~~il~nfl~~ 209 (210)
T CHL00188 155 YGVMPKSQACATTTTFYGKQQMVAAIEYDNIFAMQFHPEKSGEFGLWLLREFMKK 209 (210)
T ss_pred cEecCCCCceEEEEEecCCcceEEEEecCCEEEEecCCccccHhHHHHHHHHHhh
Confidence 9884 1123344444 3 36779999987 999999998 55666 9999876
|
|
| >cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=177.56 Aligned_cols=139 Identities=10% Similarity=0.062 Sum_probs=100.5
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCch---hhhhHHHHHHHH-hcCCCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRED---EAFKVLDTILRS-AKGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~---~~g~~~~~~i~~-~~~~~PilG- 134 (590)
++|+++|.++.+++|+. + ++.+|+||| ||||.|.... ......+. +++ ....+|+||
T Consensus 16 ~~l~~~g~~v~v~~~~~----~------------l~~~d~iii-pG~~~~~~~~~~~~~~~~~~~-i~~~~~~~~pilGi 77 (198)
T cd01748 16 NALERLGAEVIITSDPE----E------------ILSADKLIL-PGVGAFGDAMANLRERGLIEA-LKEAIASGKPFLGI 77 (198)
T ss_pred HHHHHCCCeEEEEcChH----H------------hccCCEEEE-CCCCcHHHHHHHHHHcChHHH-HHHHHHCCCcEEEE
Confidence 78899999999998753 1 334688999 9999886210 00124666 555 446799999
Q ss_pred ccchHHHHhH------------hCceeeccCCC------CcCcccc----C------C--ceeEEeccchhccccCCCcE
Q 007779 135 EVSKAQLGAF------------FSAMTIRANAF------PEATQWS----E------G--ERRAMNTFWPLLMRALPPDV 184 (590)
Q Consensus 135 CLGhQ~i~~~------------~G~~v~~~~~~------~~hG~~s----~------~--~~~~~~ryHsl~v~~~p~~l 184 (590)
|+|+|.|+.+ ||++|.+. +. +++|..+ + + ..+.+.+|||+.|.. |+.+
T Consensus 78 C~G~q~l~~~~~~g~~~~~lg~~~g~v~~~-~~~~~~~~~~~G~~~v~~~~~~~lf~~l~~~~~v~~~Hs~~v~~-~~~~ 155 (198)
T cd01748 78 CLGMQLLFESSEEGGGTKGLGLIPGKVVRF-PASEGLKVPHMGWNQLEITKESPLFKGIPDGSYFYFVHSYYAPP-DDPD 155 (198)
T ss_pred CHHHHHhccccccCCCCCCCCCcceEEEEC-CCCCCceEEEeccceEEECCCChhhhCCCCCCeEEEEeEEEEec-CCcc
Confidence 9999999998 88999998 54 4778664 1 1 268899999999964 4457
Q ss_pred EEEe-ecCCcEEEEEcC----CCCcccCCC--chhhH-HHHH
Q 007779 185 IFIA-DPEGSIMGGGGS----IGPHYSGND--PREMR-LVGA 218 (590)
Q Consensus 185 ~v~a-~~~g~im~~~h~----~gvQfHPEs--~~~m~-L~~~ 218 (590)
.++| ++++..|...+. ||||||||+ +.|.. ++||
T Consensus 156 ~~la~s~~~~~~~~~~~~~~i~GvQFHPE~~~~~g~~~~~nf 197 (198)
T cd01748 156 YILATTDYGGKFPAAVEKDNIFGTQFHPEKSGKAGLKLLKNF 197 (198)
T ss_pred eEEEEecCCCeEEEEEEcCCEEEEECCCccccHhHHHHHHhh
Confidence 7888 666655554443 999999999 34443 5554
|
Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-19 Score=173.82 Aligned_cols=133 Identities=12% Similarity=0.020 Sum_probs=101.2
Q ss_pred eccccH---HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC--------------chhhh
Q 007779 54 KADLDS---ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR--------------EDEAF 116 (590)
Q Consensus 54 ~~~~d~---~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~--------------~~~~g 116 (590)
.|.|+. .+|+++|..+.+++++.- .++.. ..++.+|+|||++||..... .....
T Consensus 17 ~~~~~~~~~~~l~~~G~~~~iv~~~~~-~~~~~--------~~l~~~dglvl~GG~~~~~~~~~~~~~~~~~~~~~~r~~ 87 (189)
T cd01745 17 RDYLNQYYVDAVRKAGGLPVLLPPVDD-EEDLE--------QYLELLDGLLLTGGGDVDPPLYGEEPHPELGPIDPERDA 87 (189)
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCCCC-hHHHH--------HHHhhCCEEEECCCCCCChhhcCCCCCcccCCCChhHHH
Confidence 455565 456667999999988742 11100 11456799999999976321 01112
Q ss_pred hHHHHHHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCccccCCceeEEeccchhccccCCCcEEEEe-ecCCc
Q 007779 117 KVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIA-DPEGS 193 (590)
Q Consensus 117 ~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s~~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~ 193 (590)
...++ ++.+ ..++|+|| |+|||.|+.++||+|.+. + .+.+||++.|..+|++++++| ++||.
T Consensus 88 ~~~~~-~~~~~~~~~PilgiC~G~Q~l~~~~Gg~v~~~-~-------------~v~~~H~~~v~~~~~~~~vla~~~d~~ 152 (189)
T cd01745 88 FELAL-LRAALERGKPILGICRGMQLLNVALGGTLYQD-I-------------RVNSLHHQAIKRLADGLRVEARAPDGV 152 (189)
T ss_pred HHHHH-HHHHHHCCCCEEEEcchHHHHHHHhCCeEEcC-C-------------ceechHHHHHhhcCCCCEEEEECCCCc
Confidence 34566 6664 46799999 999999999999999988 4 678999999999999999999 88999
Q ss_pred EEEEEcC-----CCCcccCCCc
Q 007779 194 IMGGGGS-----IGPHYSGNDP 210 (590)
Q Consensus 194 im~~~h~-----~gvQfHPEs~ 210 (590)
|||++|+ ||||||||..
T Consensus 153 vea~~~~~~~~~~gvQfHPE~~ 174 (189)
T cd01745 153 IEAIESPDRPFVLGVQWHPEWL 174 (189)
T ss_pred EEEEEeCCCCeEEEEecCCCcC
Confidence 9999985 9999999983
|
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.6e-19 Score=174.08 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=101.2
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhH------HHHHHHH-h
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKV------LDTILRS-A 126 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~------~~~~i~~-~ 126 (590)
|+-| ++|+.+|.++.++||++ + ++.+|+||| ||||+|. ++... .+.|++. +
T Consensus 11 n~~~v~~~l~~~g~~~~~~~~~~----~------------l~~~d~lil-PG~g~~~---~~~~~l~~~~~~~~l~~~~~ 70 (201)
T PRK13152 11 NLNSVAKAFEKIGAINFIAKNPK----D------------LQKADKLLL-PGVGSFK---EAMKNLKELGFIEALKEQVL 70 (201)
T ss_pred cHHHHHHHHHHCCCeEEEECCHH----H------------HcCCCEEEE-CCCCchH---HHHHHHHHcCcHHHHHHHHH
Confidence 5555 88999999999998874 1 234589999 9999997 44221 3452443 3
Q ss_pred cCCCCccc-ccchHHHHhH------------hCceeeccCC-----CCcCccccC-------------CceeEEeccchh
Q 007779 127 KGDLKDEE-EVSKAQLGAF------------FSAMTIRANA-----FPEATQWSE-------------GERRAMNTFWPL 175 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~------------~G~~v~~~~~-----~~~hG~~s~-------------~~~~~~~ryHsl 175 (590)
..++|+|| |+|+|.|+.+ ++++|.|. + .+.|++|.+ ++.+.+.+|||+
T Consensus 71 ~~~~pvlGiC~G~Q~l~~~~~~~~~~~~lg~~~g~v~~~-~~~~~~~~~~~g~~~v~~~~~~~l~~~l~~~~~~~~vHS~ 149 (201)
T PRK13152 71 VQKKPILGICLGMQLFLERGYEGGVCEGLGFIEGEVVKF-EEDLNLKIPHMGWNELEILKQSPLYQGIPEKSDFYFVHSF 149 (201)
T ss_pred hCCCcEEEECHhHHHHhhcccccCCcCCcccccEEEEEC-CCCCCCcCCccCeEEEEECCCChhhhCCCCCCeEEEEccc
Confidence 56899999 9999999997 23788876 3 235766641 236789999999
Q ss_pred ccccCCCcEEEEe-ecCC--cEEEEEcC--CCCcccCCC--chhhH-HHHHHH
Q 007779 176 LMRALPPDVIFIA-DPEG--SIMGGGGS--IGPHYSGND--PREMR-LVGALR 220 (590)
Q Consensus 176 ~v~~~p~~l~v~a-~~~g--~im~~~h~--~gvQfHPEs--~~~m~-L~~~L~ 220 (590)
.+..++ ..+++ ++++ .++++++. ||||||||+ +.|.. +++|++
T Consensus 150 ~v~~~~--~~v~a~~~~g~~~~~a~~~~~i~GvQFHPE~~~~~g~~ll~~Fl~ 200 (201)
T PRK13152 150 YVKCKD--EFVSAKAQYGHKFVASLQKDNIFATQFHPEKSQNLGLKLLENFAR 200 (201)
T ss_pred EeecCC--CcEEEEECCCCEEEEEEecCCEEEEeCCCeecChhhHHHHHHHHh
Confidence 997654 45666 5655 45677766 999999998 44555 777764
|
|
| >PRK09065 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=175.79 Aligned_cols=138 Identities=12% Similarity=-0.024 Sum_probs=103.0
Q ss_pred HHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh-hhhHHHHHHHH-hcCCCCccc-ccc
Q 007779 61 LIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE-AFKVLDTILRS-AKGDLKDEE-EVS 137 (590)
Q Consensus 61 ~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~-~g~~~~~~i~~-~~~~~PilG-CLG 137 (590)
++++.|.++.+++...-.. .+. ++.+|+|||++||.+..+... .....++ |+. +..++|+|| |+|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~------~p~-----~~~~dgvvi~Gg~~~~~d~~~w~~~~~~~-i~~~~~~~~PvlGIC~G 97 (237)
T PRK09065 30 ALGLAEQPVVVVRVFAGEP------LPA-----PDDFAGVIITGSWAMVTDRLDWSERTADW-LRQAAAAGMPLLGICYG 97 (237)
T ss_pred HhccCCceEEEEeccCCCC------CCC-----hhhcCEEEEeCCCcccCCCchhHHHHHHH-HHHHHHCCCCEEEEChh
Confidence 4445578888887763211 111 456899999999988653211 2334566 555 445799999 999
Q ss_pred hHHHHhHhCceeeccCCCC-cCcccc-----C----------CceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC
Q 007779 138 KAQLGAFFSAMTIRANAFP-EATQWS-----E----------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS 200 (590)
Q Consensus 138 hQ~i~~~~G~~v~~~~~~~-~hG~~s-----~----------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~ 200 (590)
||+|+.++||+|.+. +.+ ++|... . ++.+.+..||++.|.++|++++++| ++++.++|++++
T Consensus 98 ~Qlla~alGg~V~~~-~~g~e~G~~~v~~~~~~~~~~l~~~~~~~~~v~~~H~d~v~~lp~~~~~la~s~~~~iqa~~~~ 176 (237)
T PRK09065 98 HQLLAHALGGEVGYN-PAGRESGTVTVELHPAAADDPLFAGLPAQFPAHLTHLQSVLRLPPGAVVLARSAQDPHQAFRYG 176 (237)
T ss_pred HHHHHHHcCCccccC-CCCCccceEEEEEccccccChhhhcCCccCcEeeehhhhhhhCCCCCEEEEcCCCCCeeEEEeC
Confidence 999999999999987 553 445332 1 2368889999999999999999999 778899999997
Q ss_pred ---CCCcccCCCch
Q 007779 201 ---IGPHYSGNDPR 211 (590)
Q Consensus 201 ---~gvQfHPEs~~ 211 (590)
||+|||||-..
T Consensus 177 ~~i~gvQfHPE~~~ 190 (237)
T PRK09065 177 PHAWGVQFHPEFTA 190 (237)
T ss_pred CCEEEEEeCCcCCH
Confidence 99999999743
|
|
| >PRK07567 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-18 Score=172.05 Aligned_cols=142 Identities=13% Similarity=0.039 Sum_probs=102.6
Q ss_pred HHHHHhCCc---eEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc--hhhhh---HH----HHHHHH-h
Q 007779 60 ALIDQLGLK---ESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE--DEAFK---VL----DTILRS-A 126 (590)
Q Consensus 60 ~~~~~lg~~---~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~--~~~g~---~~----~~~i~~-~ 126 (590)
.++++.|.. +.++|.+.-... .+. ++.+|+|||++||.+|.+. ++..- .. ++ ++. .
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~dgvIi~Gg~~~~~d~~~~~~pw~~~~~~~i~~~-i~~~~ 90 (242)
T PRK07567 22 AFLRYTGLDPAELRRIRLDREPLP-------DLD---LDDYSGVIVGGSPFNVSDPAESKSPWQRRVEAELSGL-LDEVV 90 (242)
T ss_pred HHHHhcCCCccceEEEecccCCCC-------CCC---HhhccEEEEcCCCCcCCCCCCccchHHHHHHHHHHHH-HHHHH
Confidence 778888865 777777653211 111 5678999999999999753 11111 12 22 222 2
Q ss_pred cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----C----------CceeEEeccchhccccCCCcEEEEe-e
Q 007779 127 KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----E----------GERRAMNTFWPLLMRALPPDVIFIA-D 189 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~----------~~~~~~~ryHsl~v~~~p~~l~v~a-~ 189 (590)
..++|+|| |+|||.|+.++||+|.+. ....-|... . +..+.+.++|++.|.++|++++++| +
T Consensus 91 ~~~~PvLGIC~G~Qlla~a~GG~V~~~-~g~e~G~~~v~l~~~g~~~~l~~~~~~~~~~~~~H~d~V~~lp~~~~vlA~s 169 (242)
T PRK07567 91 ARDFPFLGACYGVGTLGHHQGGVVDRT-YGEPVGAVTVSLTDAGRADPLLAGLPDTFTAFVGHKEAVSALPPGAVLLATS 169 (242)
T ss_pred hcCCCEEEEchhHHHHHHHcCCEEecC-CCCcCccEEEEECCccCCChhhcCCCCceEEEeehhhhhhhCCCCCEEEEeC
Confidence 46799999 999999999999999984 322222211 0 2368888999999999999999999 7
Q ss_pred cCCcEEEEEcC---CCCcccCCCchhh
Q 007779 190 PEGSIMGGGGS---IGPHYSGNDPREM 213 (590)
Q Consensus 190 ~~g~im~~~h~---~gvQfHPEs~~~m 213 (590)
+++.+||+++. ||+|||||-...+
T Consensus 170 ~~~~vqa~~~~~~~~gvQfHPE~~~~~ 196 (242)
T PRK07567 170 PTCPVQMFRVGENVYATQFHPELDADG 196 (242)
T ss_pred CCCCEEEEEeCCCEEEEEeCCcCCHHH
Confidence 78899999986 9999999975443
|
|
| >PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.5e-19 Score=172.43 Aligned_cols=150 Identities=12% Similarity=0.059 Sum_probs=106.1
Q ss_pred eEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc----hhhhhHHH
Q 007779 51 LTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE----DEAFKVLD 120 (590)
Q Consensus 51 ~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~----~~~g~~~~ 120 (590)
|++.| |+|| .+++.+|+++.++++++ + ++.+|+||+ ||||+|... .+.+ ..+
T Consensus 2 i~vid~g~gn~~~~~~~l~~~g~~v~~~~~~~----~------------l~~~d~lil-pG~g~~~~~~~~l~~~~-~~~ 63 (199)
T PRK13181 2 IAIIDYGAGNLRSVANALKRLGVEAVVSSDPE----E------------IAGADKVIL-PGVGAFGQAMRSLRESG-LDE 63 (199)
T ss_pred EEEEeCCCChHHHHHHHHHHCCCcEEEEcChH----H------------hccCCEEEE-CCCCCHHHHHHHHHHCC-hHH
Confidence 67888 9999 89999999999986632 1 334588875 999988521 1123 345
Q ss_pred HHHHHhcCCCCccc-ccchHHHHhH-----------hCceeeccCCC-----CcCcccc----C--------CceeEEec
Q 007779 121 TILRSAKGDLKDEE-EVSKAQLGAF-----------FSAMTIRANAF-----PEATQWS----E--------GERRAMNT 171 (590)
Q Consensus 121 ~~i~~~~~~~PilG-CLGhQ~i~~~-----------~G~~v~~~~~~-----~~hG~~s----~--------~~~~~~~r 171 (590)
.|.+....++|+|| |+|||.|+.+ +|++|.|. +. +++|..+ . ++.+.+.+
T Consensus 64 ~i~~~~~~~~PvlGiC~G~Qll~~~~~~~~~~glg~l~~~v~~~-~~~~~~~~~~G~~~v~~~~~~~lf~~l~~~~~~~~ 142 (199)
T PRK13181 64 ALKEHVEKKQPVLGICLGMQLLFESSEEGNVKGLGLIPGDVKRF-RSEPLKVPQMGWNSVKPLKESPLFKGIEEGSYFYF 142 (199)
T ss_pred HHHHHHHCCCCEEEECHhHHHhhhhcccCCcCCcceEEEEEEEc-CCCCCCCCccCccccccCCCChhHcCCCCCCEEEE
Confidence 52444556799999 9999999999 88999997 43 4666543 1 23678899
Q ss_pred cchhccccCCCcEEEEe-ecCCcEE--EEEcC--CCCcccCCC--chhhH-HHHHHH
Q 007779 172 FWPLLMRALPPDVIFIA-DPEGSIM--GGGGS--IGPHYSGND--PREMR-LVGALR 220 (590)
Q Consensus 172 yHsl~v~~~p~~l~v~a-~~~g~im--~~~h~--~gvQfHPEs--~~~m~-L~~~L~ 220 (590)
|||+.+...|. ..++| +++|..| +++++ ||||||||+ +.+.. +++|++
T Consensus 143 ~Hs~~v~~~~~-~~~lA~s~~~~~~~~~~~~~~i~GvQFHPE~~~~~g~~ll~nfl~ 198 (199)
T PRK13181 143 VHSYYVPCEDP-EDVLATTEYGVPFCSAVAKDNIYAVQFHPEKSGKAGLKLLKNFAE 198 (199)
T ss_pred eCeeEeccCCc-ccEEEEEcCCCEEEEEEECCCEEEEECCCccCCHHHHHHHHHHHh
Confidence 99999865553 56788 6656654 44444 999999998 44444 777653
|
|
| >PRK00074 guaA GMP synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=191.42 Aligned_cols=164 Identities=12% Similarity=0.043 Sum_probs=123.3
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|+++|.=+. ..++++|..+.++..+. +.++.. . . .+|+||||+||.++.+.+ +....+.++
T Consensus 5 ~i~vlD~Gsq~~~li~r~lrelg~~~~v~p~~~-~~~~l~----~-----~-~~dgIIlsGGp~sv~~~~-~p~~~~~i~ 72 (511)
T PRK00074 5 KILILDFGSQYTQLIARRVRELGVYSEIVPYDI-SAEEIR----A-----F-NPKGIILSGGPASVYEEG-APRADPEIF 72 (511)
T ss_pred EEEEEECCCCcHHHHHHHHHHCCCeEEEEECCC-CHHHHh----c-----c-CCCEEEECCCCcccccCC-CccccHHHH
Confidence 4677776443 56888999999998763 222211 0 1 358999999999876422 223333313
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEe-e
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA-D 189 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a-~ 189 (590)
..++|+|| |+|||.|+.++||+|.+. +.+++|... + ++.+.++.+|++.|..+|++++++| +
T Consensus 73 ---~~~~PvLGIC~G~QlLa~~lGG~V~~~-~~~e~G~~~i~i~~~~~Lf~~l~~~~~v~~~H~d~V~~lp~g~~vlA~s 148 (511)
T PRK00074 73 ---ELGVPVLGICYGMQLMAHQLGGKVERA-GKREYGRAELEVDNDSPLFKGLPEEQDVWMSHGDKVTELPEGFKVIAST 148 (511)
T ss_pred ---hCCCCEEEECHHHHHHHHHhCCeEEec-CCcccceEEEEEcCCChhhhcCCCceEEEEECCeEEEecCCCcEEEEEe
Confidence 34799999 999999999999999998 777888553 1 2357889999999999999999999 8
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhh-cCCCCC
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVL-AGGHLG 229 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~-~G~~Lt 229 (590)
+++.++|++|+ ||||||||. +.|+. |++|+.++. .-++.+
T Consensus 149 ~~~~v~ai~~~~~~i~GvQFHPE~~~t~~G~~il~nFl~~i~~~~~~~~ 197 (511)
T PRK00074 149 ENCPIAAIANEERKFYGVQFHPEVTHTPQGKKLLENFVFDICGCKGDWT 197 (511)
T ss_pred CCCCEEEEEeCCCCEEEEeCCCCcCCchhHHHHHHHHHHHhcCCCCCcc
Confidence 88999999985 999999998 56777 999996653 445555
|
|
| >KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-18 Score=194.37 Aligned_cols=160 Identities=13% Similarity=0.059 Sum_probs=121.1
Q ss_pred cccceeEeecc-ccHHHHHHh---CCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHH
Q 007779 46 GRRIRLTVKAD-LDSALIDQL---GLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDT 121 (590)
Q Consensus 46 ~~~~~~~~~~~-~d~~~~~~l---g~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~ 121 (590)
|+..+|...|- +--+.++-| |++++|+.+|-. +. -+.||||+||+|||+|+ -.....+.
T Consensus 170 Gk~~~I~aiDcG~K~N~IRcL~~RGa~vtVvPw~~~-i~-------------~~~yDGlflSNGPGdPe---~~~~~v~~ 232 (1435)
T KOG0370|consen 170 GKSLRILAIDCGLKYNQIRCLVKRGAEVTVVPWDYP-IA-------------KEEYDGLFLSNGPGDPE---LCPLLVQN 232 (1435)
T ss_pred CcccEEEEcccCchHHHHHHHHHhCceEEEecCCcc-cc-------------ccccceEEEeCCCCCch---hhHHHHHH
Confidence 33445544432 222556655 999999988732 11 12579999999999999 55555555
Q ss_pred HHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCCcEEEEe--e
Q 007779 122 ILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPPDVIFIA--D 189 (590)
Q Consensus 122 ~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~~l~v~a--~ 189 (590)
++++ ..++|++| |||||.++.+.|++++++ +++.||++. +|+.+.++++|+|+|+ ++|.++..+. .
T Consensus 233 -vr~lL~~~~PvfGIClGHQllA~AaGakT~Km-KyGNRGhNiP~~~~~tGrc~ITSQNHGYAVD~~tLp~gWk~lFvN~ 310 (1435)
T KOG0370|consen 233 -VRELLESNVPVFGICLGHQLLALAAGAKTYKM-KYGNRGHNIPCTCRATGRCFITSQNHGYAVDPATLPAGWKPLFVNA 310 (1435)
T ss_pred -HHHHHhCCCCeEEEehhhHHHHHhhCCceEEe-eccccCCCccceeccCceEEEEecCCceeeccccccCCCchheeec
Confidence 4443 33599999 999999999999999999 999999996 5889999999999994 8999998888 6
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH--HHHHHHHhhc
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR--LVGALREVLA 224 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~--L~~~L~kl~~ 224 (590)
+||+-.|+.|. +.||||||+ +.... +..|+..+..
T Consensus 311 NDgSNEGI~Hss~P~fSvQFHPEat~GP~DTeyLFDiFi~lvkk 354 (1435)
T KOG0370|consen 311 NDGSNEGIMHSSKPFFSVQFHPEATPGPHDTEYLFDVFIELVKK 354 (1435)
T ss_pred ccCCCceEecCCCCceeeecCCcCCCCCcchHHHHHHHHHHHHH
Confidence 78999999997 999999998 33332 4555544433
|
|
| >cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-18 Score=166.06 Aligned_cols=136 Identities=11% Similarity=0.023 Sum_probs=105.8
Q ss_pred HHHHHhC---CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCC-CCc-hhhhhHHHHHHHHh-cCCCCcc
Q 007779 60 ALIDQLG---LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRP-LRE-DEAFKVLDTILRSA-KGDLKDE 133 (590)
Q Consensus 60 ~~~~~lg---~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P-~~~-~~~g~~~~~~i~~~-~~~~Pil 133 (590)
.+++++| .++++++.+.-.. ...++.+|+|||++||.++ .+. .......++ ++.+ ...+|++
T Consensus 18 ~~l~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~dgvil~Gg~~~~~~~~~~~~~~~~~~-i~~~~~~~~pil 85 (188)
T cd01741 18 DLLREAGAETIEIDVVDVYAGEL-----------LPDLDDYDGLVILGGPMSVDEDDYPWLKKLKEL-IRQALAAGKPVL 85 (188)
T ss_pred HHHHhcCCCCceEEEEecCCCCC-----------CCCcccCCEEEECCCCccCCccCChHHHHHHHH-HHHHHHCCCCEE
Confidence 7888888 6888888875221 0115678999999999988 211 112345666 6654 4569999
Q ss_pred c-ccchHHHHhHhCceeeccCCCCcCcccc------C----------CceeEEeccchhccccCCCcEEEEe-ecCCcEE
Q 007779 134 E-EVSKAQLGAFFSAMTIRANAFPEATQWS------E----------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIM 195 (590)
Q Consensus 134 G-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~----------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im 195 (590)
| |+|||.|+.++||+|.+. +...|..+. + .+.+.+.++|++.|..+|++++++| ++++.++
T Consensus 86 giC~G~q~l~~~lGG~v~~~-~~~~~~g~~~v~~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~lp~~~~~la~~~~~~v~ 164 (188)
T cd01741 86 GICLGHQLLARALGGKVGRN-PKGWEIGWFPVTLTEAGKADPLFAGLPDEFPVFHWHGDTVVELPPGAVLLASSEACPNQ 164 (188)
T ss_pred EECccHHHHHHHhCCEEecC-CCcceeEEEEEEeccccccCchhhcCCCcceEEEEeccChhhCCCCCEEeecCCCCCcc
Confidence 9 999999999999999998 665444433 1 1368899999999999999999999 7889999
Q ss_pred EEEcC---CCCcccCC
Q 007779 196 GGGGS---IGPHYSGN 208 (590)
Q Consensus 196 ~~~h~---~gvQfHPE 208 (590)
|++++ ||+|||||
T Consensus 165 ~~~~~~~~~g~QfHPE 180 (188)
T cd01741 165 AFRYGDRALGLQFHPE 180 (188)
T ss_pred eEEecCCEEEEccCch
Confidence 99986 99999999
|
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-18 Score=169.29 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=101.6
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHHHHHHHH-hcCCCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVLDTILRS-AKGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~-~~~~~PilG- 134 (590)
.+|+++|+++.++|++. + ++.+|+||| ||+|.+.+..+. -...+. |++ ...++|+||
T Consensus 17 ~~l~~~G~~v~~~~~~~----~------------l~~~d~iii-pG~~~~~~~~~~~~~~~~~~~-i~~~~~~~~pvlGI 78 (205)
T PRK13141 17 KALERLGAEAVITSDPE----E------------ILAADGVIL-PGVGAFPDAMANLRERGLDEV-IKEAVASGKPLLGI 78 (205)
T ss_pred HHHHHCCCeEEEECCHH----H------------hccCCEEEE-CCCCchHHHHHHHHHcChHHH-HHHHHHCCCcEEEE
Confidence 67888999999998752 1 345689998 888876521100 123556 444 456799999
Q ss_pred ccchHHHHhH------------hCceeeccCC------CCcCcccc----C--------CceeEEeccchhccccCCCcE
Q 007779 135 EVSKAQLGAF------------FSAMTIRANA------FPEATQWS----E--------GERRAMNTFWPLLMRALPPDV 184 (590)
Q Consensus 135 CLGhQ~i~~~------------~G~~v~~~~~------~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l 184 (590)
|+|||.|+.+ +|++|.+. + .++.|... + ...+.+.+|||+.+. +|+.+
T Consensus 79 C~G~Qll~~~~~~~~~~~~lg~l~g~v~~~-~~~~~~~~~~~g~~~i~~~~~~~l~~~l~~~~~v~~~Hs~~v~-~~~~~ 156 (205)
T PRK13141 79 CLGMQLLFESSEEFGETEGLGLLPGRVRRF-PPEEGLKVPHMGWNQLELKKESPLLKGIPDGAYVYFVHSYYAD-PCDEE 156 (205)
T ss_pred CHHHHHhhhccccCCCCCccceEEEEEEEc-CCCCCCcccEecCccceeCCCChhhhCCCCCCEEEEECeeEec-cCCcC
Confidence 9999999997 78999988 5 22333322 1 125688899999994 66778
Q ss_pred EEEe-ecCC-cEEEEEcC---CCCcccCCC--chhhH-HHHHHHHh
Q 007779 185 IFIA-DPEG-SIMGGGGS---IGPHYSGND--PREMR-LVGALREV 222 (590)
Q Consensus 185 ~v~a-~~~g-~im~~~h~---~gvQfHPEs--~~~m~-L~~~L~kl 222 (590)
.++| ++++ .++++++. ||||||||+ +.+.. +++|++.+
T Consensus 157 ~v~a~~~~~~~~~a~~~~~~i~GvQfHPE~~~~~g~~l~~~fl~~~ 202 (205)
T PRK13141 157 YVAATTDYGVEFPAAVGKDNVFGAQFHPEKSGDVGLKILKNFVEMV 202 (205)
T ss_pred eEEEEEeCCcEEEEEEecCCEEEEeCCCccchHHHHHHHHHHHHHh
Confidence 8888 6655 68888665 999999998 44544 78887654
|
|
| >COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.2e-18 Score=165.53 Aligned_cols=149 Identities=10% Similarity=0.022 Sum_probs=108.7
Q ss_pred HHHHHhC-CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh--hhhHHHHHHHHh-cCCCCccc-
Q 007779 60 ALIDQLG-LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE--AFKVLDTILRSA-KGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg-~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~--~g~~~~~~i~~~-~~~~PilG- 134 (590)
..++++| .-..++.++. +..++. .+++|+||||.||-+.. +++ ++...+. |+.+ ...+|+||
T Consensus 19 r~~re~g~v~~e~~~~~~-~~~~~~----------~~~~~giIlsGgp~sv~-~~~~w~~~~~~~-i~~~~~p~~pvLGI 85 (198)
T COG0518 19 RRLRELGYVYSEIVPYTG-DAEELP----------LDSPDGIIISGGPMSVY-DEDPWLPREKDL-IKDAGVPGKPVLGI 85 (198)
T ss_pred HHHHHcCCceEEEEeCCC-Cccccc----------ccCCCEEEEcCCCCCCc-cccccchhHHHH-HHHhCCCCCCEEEE
Confidence 4467788 5555555553 233211 33569999999997664 334 7778888 5544 34567999
Q ss_pred ccchHHHHhHhCceeeccCCCCcCcccc---C--------C--cee-EEeccchhccccCCCcEEEEe-ecCCcEEEEEc
Q 007779 135 EVSKAQLGAFFSAMTIRANAFPEATQWS---E--------G--ERR-AMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGG 199 (590)
Q Consensus 135 CLGhQ~i~~~~G~~v~~~~~~~~hG~~s---~--------~--~~~-~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h 199 (590)
|+|||.|+.++||+|.+. +..+-|... . | ..+ .++..|+..|..+|+.++++| ++.+.+.|+++
T Consensus 86 C~G~Ql~A~~lGg~V~~~-~~~E~G~~~v~~~~~~~~l~~gl~~~~~~v~~sH~D~v~~lP~g~~vlA~s~~cp~qa~~~ 164 (198)
T COG0518 86 CLGHQLLAKALGGKVERG-PKREIGWTPVELTEGDDPLFAGLPDLFTTVFMSHGDTVVELPEGAVVLASSETCPNQAFRY 164 (198)
T ss_pred ChhHHHHHHHhCCEEecc-CCCccceEEEEEecCccccccCCccccCccccchhCccccCCCCCEEEecCCCChhhheec
Confidence 999999999999999998 555666553 1 2 245 489999999999999999999 77778888888
Q ss_pred C---CCCcccCCCc--hhhH-HHHHHHHh
Q 007779 200 S---IGPHYSGNDP--REMR-LVGALREV 222 (590)
Q Consensus 200 ~---~gvQfHPEs~--~~m~-L~~~L~kl 222 (590)
. ||||||||-. .+.+ ++++..++
T Consensus 165 ~~~~~gvQFHpEv~~~~~~~~l~nf~~~i 193 (198)
T COG0518 165 GKRAYGVQFHPEVTHEYGEALLENFAHEI 193 (198)
T ss_pred CCcEEEEeeeeEEeHHHHHHHHHHhhhhh
Confidence 6 9999999984 4444 66665433
|
|
| >TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.4e-18 Score=166.00 Aligned_cols=142 Identities=10% Similarity=0.039 Sum_probs=97.3
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCch-hhhhH-HHHHHH-HhcCCCCccc-c
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRED-EAFKV-LDTILR-SAKGDLKDEE-E 135 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~-~~g~~-~~~~i~-~~~~~~PilG-C 135 (590)
++++++|.+++|+||+. + ++.+|+||+ ||||.|.+.. ..... .+.+++ .+..++|+|| |
T Consensus 16 ~~l~~~g~~v~v~~~~~----~------------l~~~d~lii-~G~~~~~~~~~~l~~~~~~~l~~~~~~~~~pvlGiC 78 (196)
T TIGR01855 16 RALKRVGAEPVVVKDSK----E------------AELADKLIL-PGVGAFGAAMARLRENGLDLFVELVVRLGKPVLGIC 78 (196)
T ss_pred HHHHHCCCcEEEEcCHH----H------------hccCCEEEE-CCCCCHHHHHHHHHHcCcHHHHHHHHhCCCCEEEEC
Confidence 77889999999999862 1 335688887 9999886210 01111 344235 3556799999 9
Q ss_pred cchHHHHhH------------hCceeeccC--CCCcCcccc----------C--CceeEEeccchhccccCCCcEEEEe-
Q 007779 136 VSKAQLGAF------------FSAMTIRAN--AFPEATQWS----------E--GERRAMNTFWPLLMRALPPDVIFIA- 188 (590)
Q Consensus 136 LGhQ~i~~~------------~G~~v~~~~--~~~~hG~~s----------~--~~~~~~~ryHsl~v~~~p~~l~v~a- 188 (590)
+|+|.|+.+ +|++|.|.+ +.+++|... . ++.+.+.+|||+.|...| .. +++
T Consensus 79 ~G~Qll~~~~~~~~~~~glg~~~~~v~~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~~~v~~~Hs~~v~~~~-~~-~~a~ 156 (196)
T TIGR01855 79 LGMQLLFERSEEGGGVPGLGLIKGNVVKLEARKVPHMGWNEVHPVKESPLLNGIDEGAYFYFVHSYYAVCEE-EA-VLAY 156 (196)
T ss_pred HHHHHhhhccccCCCCCCcceeeEEEEECCCCCCCcccCeeeeeCCCChHHhCCCCCCEEEEECeeEecCCC-Cc-EEEE
Confidence 999999999 799999872 234666432 1 236889999999996444 44 555
Q ss_pred ecCCcEEEEEcC----CCCcccCCCc--hhhH-HHHHHH
Q 007779 189 DPEGSIMGGGGS----IGPHYSGNDP--REMR-LVGALR 220 (590)
Q Consensus 189 ~~~g~im~~~h~----~gvQfHPEs~--~~m~-L~~~L~ 220 (590)
+++|..|...++ ||+|||||+. .+.. +++|++
T Consensus 157 ~~~g~~~~~~~~~~~i~GvQFHPE~~~~~g~~ll~~f~~ 195 (196)
T TIGR01855 157 ADYGEKFPAAVQKGNIFGTQFHPEKSGKTGLKLLENFLE 195 (196)
T ss_pred EcCCcEEEEEEecCCEEEEECCCccCcHhHHHHHHHHHh
Confidence 667665544444 9999999983 3444 666654
|
This model represents the glutamine amidotransferase subunit (or domain, in eukaryotic systems) of imidazole glycerol phosphate synthase. This subunit catalyzes step 5 of histidine biosynthesis from PRPP. The other subunit, the cyclase, catalyzes step 6. |
| >PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-17 Score=170.69 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=93.8
Q ss_pred ccCCCeEEECCCCCC--CC------Cchh--h---hhHHHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccC----C
Q 007779 94 LEAQAKVCTGPTQTR--PL------REDE--A---FKVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRAN----A 154 (590)
Q Consensus 94 ~~~~~~ivlspGPg~--P~------~~~~--~---g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~----~ 154 (590)
++.+|||||+.||.+ |. +... . -..+++ ++. +..++|+|| |+|||.|+.+|||++.+.. .
T Consensus 59 l~~~DGlil~GG~~dv~P~~yg~~~~~~~~~~~rD~~e~~l-i~~a~~~~~PILGICrG~Qllnva~GGtl~~~~~~~~~ 137 (254)
T PRK11366 59 LPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAL-INAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPE 137 (254)
T ss_pred HHhCCEEEeCCCCCCcCHhhcCCCCCCCCCChhHHHHHHHH-HHHHHHCCCCEEEECHhHHHHHHHhCCeEeeccccccc
Confidence 556799999999864 31 0000 0 123455 665 556899999 9999999999999999741 1
Q ss_pred CCcCcc------------cc-----C--------C--ceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC-----C
Q 007779 155 FPEATQ------------WS-----E--------G--ERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS-----I 201 (590)
Q Consensus 155 ~~~hG~------------~s-----~--------~--~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~-----~ 201 (590)
...|++ ++ . + +.+.|.+||+..|+.+|++++++| ++||.|||++|+ +
T Consensus 138 ~~~h~~~~~~~~~~~~~~~h~v~~~~~s~l~~i~~~~~~~~Vns~H~q~V~~l~~gl~v~A~s~dg~ieAie~~~~~~~~ 217 (254)
T PRK11366 138 LLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFAL 217 (254)
T ss_pred ccccccCCccccccccCCceEEEECCCCcHHHhcCCCceEEeehHHHHHHhhcccceEEEEEcCCCcEEEEEeCCCCCEE
Confidence 113443 11 0 1 257899999999999999999999 899999999986 7
Q ss_pred CCcccCCC---chh--hH-HHHHHHHh
Q 007779 202 GPHYSGND---PRE--MR-LVGALREV 222 (590)
Q Consensus 202 gvQfHPEs---~~~--m~-L~~~L~kl 222 (590)
|||||||+ +.+ .. +++|++..
T Consensus 218 GVQwHPE~~~~~~~~~~~lf~~fv~~~ 244 (254)
T PRK11366 218 GVQWHPEWNSSEYALSRILFEGFITAC 244 (254)
T ss_pred EEEeCCCcCCCCCchHHHHHHHHHHHH
Confidence 99999998 233 33 77777655
|
|
| >PRK07053 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-17 Score=163.05 Aligned_cols=141 Identities=8% Similarity=-0.003 Sum_probs=105.9
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHHHHHHHH-hcCCCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVLDTILRS-AKGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~-~~~~~PilG- 134 (590)
+++++.|.+++|+|++.-.. +.++ ++.+|+|||++||.++.+.++. ....++ |+. +..++|+||
T Consensus 21 ~~L~~~g~~~~v~~~~~~~~-------~~~~---~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~-i~~~~~~~~PvlGI 89 (234)
T PRK07053 21 QVLGARGYRVRYVDVGVDDL-------ETLD---ALEPDLLVVLGGPIGVYDDELYPFLAPEIAL-LRQRLAAGLPTLGI 89 (234)
T ss_pred HHHHHCCCeEEEEecCCCcc-------CCCC---ccCCCEEEECCCCCCCCCCCcCCcHHHHHHH-HHHHHHCCCCEEEE
Confidence 78888999999999864211 1111 4567999999999887643222 235566 555 445799999
Q ss_pred ccchHHHHhHhCceeeccCCCCcCcccc-----CC---------ceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEc
Q 007779 135 EVSKAQLGAFFSAMTIRANAFPEATQWS-----EG---------ERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGG 199 (590)
Q Consensus 135 CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~~---------~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h 199 (590)
|+|||+|+.++||+|.+. +..+.|-.. .+ ..+.+.++|+..+ ++|+..+++| ++.+.++|++.
T Consensus 90 C~G~Qlla~alGg~V~~~-~~~e~G~~~i~~t~~g~~~pl~~~~~~~~~~~~H~d~~-~lP~ga~~La~s~~~~~qaf~~ 167 (234)
T PRK07053 90 CLGAQLIARALGARVYPG-GQKEIGWAPLTLTDAGRASPLRHLGAGTPVLHWHGDTF-DLPEGATLLASTPACRHQAFAW 167 (234)
T ss_pred CccHHHHHHHcCCcEecC-CCCeEeEEEEEEeccccCChhhcCCCcceEEEEeCCEE-ecCCCCEEEEcCCCCCeeEEEe
Confidence 999999999999999986 554545332 11 2578889999987 6999999999 77778999987
Q ss_pred C---CCCcccCCCchhh
Q 007779 200 S---IGPHYSGNDPREM 213 (590)
Q Consensus 200 ~---~gvQfHPEs~~~m 213 (590)
. ||+|||||-...+
T Consensus 168 g~~~~g~QfHpE~~~~~ 184 (234)
T PRK07053 168 GNHVLALQFHPEAREDR 184 (234)
T ss_pred CCCEEEEeeCccCCHHH
Confidence 4 9999999985543
|
|
| >PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-17 Score=164.64 Aligned_cols=144 Identities=8% Similarity=-0.034 Sum_probs=98.6
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh-------hhHHHHHHHHh
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA-------FKVLDTILRSA 126 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~-------g~~~~~~i~~~ 126 (590)
|+.| +-++.++.++..+++.+ + ++.+|+|| +||||+|. ++ |.. +.|.+.+
T Consensus 11 Nl~s~~~al~~~~~~~~~~~~~~----~------------l~~~d~iI-lPG~g~~~---~~~~~l~~~gl~-~~i~~~~ 69 (210)
T PRK14004 11 NIHSCLKAVSLYTKDFVFTSDPE----T------------IENSKALI-LPGDGHFD---KAMENLNSTGLR-STIDKHV 69 (210)
T ss_pred hHHHHHHHHHHcCCeEEEECCHH----H------------hccCCEEE-ECCCCchH---HHHHHHHHcCcH-HHHHHHH
Confidence 7877 77888888777775532 1 23447765 99999986 43 443 4436667
Q ss_pred cCCCCccc-ccchHHHHhHhC------------------ceeeccC----CCCcCcccc------C--------CceeEE
Q 007779 127 KGDLKDEE-EVSKAQLGAFFS------------------AMTIRAN----AFPEATQWS------E--------GERRAM 169 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~~G------------------~~v~~~~----~~~~hG~~s------~--------~~~~~~ 169 (590)
..++|+|| |||+|.|+++++ ++|.+.+ +.|+-|=+. + .+.+.+
T Consensus 70 ~~~~pilGiC~G~Q~l~~~~~e~~~~~~~~~~~Glg~~~~~v~~~~~~~~~~ph~Gw~~v~~~~~~~~~lf~~l~~~~~v 149 (210)
T PRK14004 70 ESGKPLFGICIGFQILFESSEETNQGTKKEQIEGLGYIKGKIKKFEGKDFKVPHIGWNRLQIRRKDKSKLLKGIGDQSFF 149 (210)
T ss_pred HcCCCEEEECHhHHHHHHhcccccCCCcCcccCCcceeEEEEEEcCCCCCcCCccCcccceeccCCCCccccCCCCCCEE
Confidence 77899999 999999999875 6666641 223333221 0 125789
Q ss_pred eccchhccccCCCcEEEEe-ecC-Cc-EEEEEcC---CCCcccCCC--chhhH-HHHHHHH
Q 007779 170 NTFWPLLMRALPPDVIFIA-DPE-GS-IMGGGGS---IGPHYSGND--PREMR-LVGALRE 221 (590)
Q Consensus 170 ~ryHsl~v~~~p~~l~v~a-~~~-g~-im~~~h~---~gvQfHPEs--~~~m~-L~~~L~k 221 (590)
.+|||+.++. +..+.+++ ++. |. +|++..+ ||+|||||+ +.|.. |+|||+.
T Consensus 150 ~~~HS~~~~~-~~~l~~sa~~~~~g~~~~a~~~~~~i~GvQFHPE~s~~~G~~iL~nfl~~ 209 (210)
T PRK14004 150 YFIHSYRPTG-AEGNAITGLCDYYQEKFPAVVEKENIFGTQFHPEKSHTHGLKLLENFIEF 209 (210)
T ss_pred EEeceeecCC-CCcceEEEeeeECCEEEEEEEecCCEEEEeCCcccCchhHHHHHHHHHhh
Confidence 9999997633 45577777 554 66 4455544 999999998 67777 8898874
|
|
| >PRK13527 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-17 Score=161.02 Aligned_cols=157 Identities=11% Similarity=0.019 Sum_probs=108.6
Q ss_pred ceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc--hhhhhHH
Q 007779 49 IRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE--DEAFKVL 119 (590)
Q Consensus 49 ~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~--~~~g~~~ 119 (590)
+.|++....+- +.++++|.++.+++-+.. .. ++.+|+|||++||+.+.+. .+.+ ..
T Consensus 3 i~vl~~~~~~~e~~~~~~~~l~~~g~~~~~~~~~~~--~~------------l~~~d~iii~GG~~~~~~~~~~~~~-~~ 67 (200)
T PRK13527 3 IGVLALQGDVEEHIDALKRALDELGIDGEVVEVRRP--GD------------LPDCDALIIPGGESTTIGRLMKREG-IL 67 (200)
T ss_pred EEEEEECCccHHHHHHHHHHHHhcCCCeEEEEeCCh--HH------------hccCCEEEECCCcHHHHHHHHhhcc-HH
Confidence 45556655554 455667888877765421 11 4467999999999886311 1222 46
Q ss_pred HHHHHHhcCCCCccc-ccchHHHHhHhCce-eeccCCCCcCcccc---------------------C--CceeEEeccch
Q 007779 120 DTILRSAKGDLKDEE-EVSKAQLGAFFSAM-TIRANAFPEATQWS---------------------E--GERRAMNTFWP 174 (590)
Q Consensus 120 ~~~i~~~~~~~PilG-CLGhQ~i~~~~G~~-v~~~~~~~~hG~~s---------------------~--~~~~~~~ryHs 174 (590)
+.|.+.+..++|+|| |+|||.|+.++|+. +.+. +.+++|... . ++++.+.+||+
T Consensus 68 ~~i~~~~~~~~pilGIC~G~Qll~~~~gg~~v~~~-~~~~lG~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~H~ 146 (200)
T PRK13527 68 DEIKEKIEEGLPILGTCAGLILLAKEVGDDRVTKT-EQPLLGLMDVTVKRNAFGRQRDSFEAEIDLSGLDGPFHAVFIRA 146 (200)
T ss_pred HHHHHHHHCCCeEEEECHHHHHHHhhhcCCccCCC-CCceeeeeEEEEeeccccCccccEEEeEeccccCCcceEEEEcc
Confidence 662333556799999 99999999999984 4343 444444221 1 23788999999
Q ss_pred hccccCCCcEEEEe-ecCCcEEEEEcC--CCCcccCCCchhhH-HHHHHHHh
Q 007779 175 LLMRALPPDVIFIA-DPEGSIMGGGGS--IGPHYSGNDPREMR-LVGALREV 222 (590)
Q Consensus 175 l~v~~~p~~l~v~a-~~~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl 222 (590)
+.|..+|++++++| ++|+ +||++.. ||+|||||-....+ +++||..+
T Consensus 147 ~~v~~lp~~~~~la~~~~~-~~a~~~~~~~g~QfHPE~~~~~~l~~~f~~~~ 197 (200)
T PRK13527 147 PAITKVGGDVEVLAKLDDR-IVAVEQGNVLATAFHPELTDDTRIHEYFLKKV 197 (200)
T ss_pred ccccccCCCeEEEEEECCE-EEEEEECCEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 99999999999999 6655 6788766 99999999744455 77777654
|
|
| >PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-17 Score=163.03 Aligned_cols=154 Identities=10% Similarity=0.051 Sum_probs=102.8
Q ss_pred ceeEeec----cccH--HHHHHhCC--ceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc----hhhh
Q 007779 49 IRLTVKA----DLDS--ALIDQLGL--KESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE----DEAF 116 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg~--~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~----~~~g 116 (590)
++|.+.| |+=| ++|+++|. ++.++++. ++ ++.+|+||| ||.|..... ...+
T Consensus 2 ~~~~iid~g~gn~~s~~~al~~~g~~~~v~~~~~~----~~------------l~~~d~lIl-pG~~~~~~~~~~l~~~~ 64 (209)
T PRK13146 2 MTVAIIDYGSGNLRSAAKALERAGAGADVVVTADP----DA------------VAAADRVVL-PGVGAFADCMRGLRAVG 64 (209)
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCCccEEEECCH----HH------------hcCCCEEEE-CCCCcHHHHHHHHHHCC
Confidence 3556666 3444 89999999 55555432 21 456799999 886654310 1112
Q ss_pred hHHHHHHHHh-cCCCCccc-ccchHHHHhH------------hCceeeccC------CCCcCcccc----C------C--
Q 007779 117 KVLDTILRSA-KGDLKDEE-EVSKAQLGAF------------FSAMTIRAN------AFPEATQWS----E------G-- 164 (590)
Q Consensus 117 ~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~------------~G~~v~~~~------~~~~hG~~s----~------~-- 164 (590)
....+ ++.. ...+|+|| |+|+|.|+.+ ++++|.+.+ +.|+.|-.. + +
T Consensus 65 ~~~~~-~~~~~~~~~PvlGiC~G~q~l~~~~~e~~~~~glg~l~g~v~~~~~~~~~~~~p~~G~~~v~~~~~~~lf~~~~ 143 (209)
T PRK13146 65 LGEAV-IEAVLAAGRPFLGICVGMQLLFERGLEHGDTPGLGLIPGEVVRFQPDGPALKVPHMGWNTVDQTRDHPLFAGIP 143 (209)
T ss_pred cHHHH-HHHHHhCCCcEEEECHHHHHHhhcccccCCCCCcceEeEEEEEcCCCCCCCccCccChHHeeeCCCChhccCCC
Confidence 22333 6654 36799999 9999999999 899999861 234555332 1 1
Q ss_pred ceeEEeccchhccccCCCcEEEEe-ecCC-cEEEEEcC---CCCcccCCC--chhhH-HHHHHHH
Q 007779 165 ERRAMNTFWPLLMRALPPDVIFIA-DPEG-SIMGGGGS---IGPHYSGND--PREMR-LVGALRE 221 (590)
Q Consensus 165 ~~~~~~ryHsl~v~~~p~~l~v~a-~~~g-~im~~~h~---~gvQfHPEs--~~~m~-L~~~L~k 221 (590)
+.+.+.+|||+.|...| ...++| ++++ .+++++.+ ||||||||+ +.|.. ++||++.
T Consensus 144 ~~~~v~~~Hs~~v~~~~-~~~~la~s~~~~~~~a~~~~~~i~GvQFHPE~s~~~G~~ll~nfl~~ 207 (209)
T PRK13146 144 DGARFYFVHSYYAQPAN-PADVVAWTDYGGPFTAAVARDNLFATQFHPEKSQDAGLALLRNFLAW 207 (209)
T ss_pred CCCEEEEEeEEEEEcCC-CCcEEEEEcCCCEEEEEEecCCEEEEEcCCcccHHHHHHHHHHHHhh
Confidence 35899999999997555 457777 6655 46776655 999999999 44555 7787754
|
|
| >cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.2e-17 Score=163.46 Aligned_cols=145 Identities=10% Similarity=-0.029 Sum_probs=103.5
Q ss_pred eeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHH-
Q 007779 53 VKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRS- 125 (590)
Q Consensus 53 ~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~- 125 (590)
+.|+.|| ++..+++.++.++++|.-+..... . ...++.+|+||++|||+.|. ..+ ..++ ++.
T Consensus 12 ~~day~s~~~~L~~a~~~~~~~v~~~~i~~~~~~~~~----~--~~~l~~~dgivl~GG~~~~~---~~~-~~~~-i~~~ 80 (235)
T cd01746 12 LPDAYLSVLEALKHAGIALGVKLEIKWIDSEDLEEEN----A--EEALKGADGILVPGGFGIRG---VEG-KILA-IKYA 80 (235)
T ss_pred CHHHHHHHHHHHHHHHHHcCCeeEEEEeChhhcCccc----h--hhhhccCCEEEECCCCCCcc---hhh-HHHH-HHHH
Confidence 3455666 556667889999888754433210 0 01256789999999999998 333 3455 444
Q ss_pred hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----------------------------------C-------
Q 007779 126 AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----------------------------------E------- 163 (590)
Q Consensus 126 ~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------------------------------~------- 163 (590)
+..++|+|| |+|+|.|+.+||+.+.++ +...|.... .
T Consensus 81 ~~~~~PvlGIClG~Q~l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~h~v~i~~~s~l~~~ 159 (235)
T cd01746 81 RENNIPFLGICLGMQLAVIEFARNVLGL-PDANSTEFDPDTPHPVVDLMPEQKGVKDLGGTMRLGAYPVILKPGTLAHKY 159 (235)
T ss_pred HHCCceEEEEEhHHHHHHHHHHHHhcCC-ccCCccccCCCCCCCEEEECcccccccccCcccccCceEEEECCCChHHHH
Confidence 456899999 999999999999999987 554322110 0
Q ss_pred -Cc-eeEEeccchhccc-----cC-CCcEEEEe-ec-CCcEEEEEcC----C-CCcccCCC
Q 007779 164 -GE-RRAMNTFWPLLMR-----AL-PPDVIFIA-DP-EGSIMGGGGS----I-GPHYSGND 209 (590)
Q Consensus 164 -~~-~~~~~ryHsl~v~-----~~-p~~l~v~a-~~-~g~im~~~h~----~-gvQfHPEs 209 (590)
|+ ...+..+|.+.|+ .+ .+.|++++ +. ||.|+|++++ | |||||||-
T Consensus 160 ~g~~~~~~n~~H~~~v~~~~~~~~~~~~l~v~a~~~ddg~ieaie~~~~pf~lgvQ~HPE~ 220 (235)
T cd01746 160 YGKDEVEERHRHRYEVNPEYVDELEEAGLRFSGTDPDGGLVEIVELPDHPFFVGTQFHPEF 220 (235)
T ss_pred hCCCEEEEecCcccccCHHHHHHHhhCCeEEEEEeCCCCeEEEEEcCCCCcEEEEECCCCC
Confidence 11 4677888999883 33 67899999 66 8999999987 4 99999996
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to th |
| >PRK05665 amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=154.55 Aligned_cols=143 Identities=12% Similarity=-0.060 Sum_probs=106.9
Q ss_pred ccCCCeEEECCCCCCCCCchh-hhhHHHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCC-cCcccc-----C-
Q 007779 94 LEAQAKVCTGPTQTRPLREDE-AFKVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFP-EATQWS-----E- 163 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~-~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~-~hG~~s-----~- 163 (590)
++.+|+|||+.||.++.+... .....++ |+. +..++|+|| |+|||.|+.++||+|.+. +.+ ..|... +
T Consensus 55 ~~~~dgiiitGs~~~v~~~~pwi~~l~~~-i~~~~~~~~PilGIC~GhQlla~AlGG~V~~~-~~G~e~G~~~~~~~~~~ 132 (240)
T PRK05665 55 DEKFDAYLVTGSKADSFGTDPWIQTLKTY-LLKLYERGDKLLGVCFGHQLLALLLGGKAERA-SQGWGVGIHRYQLAAHA 132 (240)
T ss_pred cccCCEEEECCCCCCccccchHHHHHHHH-HHHHHhcCCCEEEEeHHHHHHHHHhCCEEEeC-CCCcccceEEEEecCCC
Confidence 557899999999999764322 2345566 555 445799999 999999999999999998 543 334321 1
Q ss_pred ------CceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC---CCCcccCCCchhhHHHHHHHHhhcCCCCCHHHH
Q 007779 164 ------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS---IGPHYSGNDPREMRLVGALREVLAGGHLGYEEV 233 (590)
Q Consensus 164 ------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~---~gvQfHPEs~~~m~L~~~L~kl~~G~~Lt~eEa 233 (590)
.+.+.+..+|+..|..||++.+++| ++.+.++|++.. ||+|||||-...+ ++.+|+.- .+.++.+++
T Consensus 133 ~~~~~~~~~~~~~~~H~D~V~~LP~ga~~La~s~~~~~q~~~~~~~~~g~QfHPE~~~~~-~~~~l~~~--~~~~~~~~~ 209 (240)
T PRK05665 133 PWMSPAVTELTLLISHQDQVTALPEGATVIASSDFCPFAAYHIGDQVLCFQGHPEFVHDY-SRALLDLR--QEHLGEEVY 209 (240)
T ss_pred ccccCCCCceEEEEEcCCeeeeCCCCcEEEEeCCCCcEEEEEeCCCEEEEecCCcCcHHH-HHHHHHHh--hhhcCHHHH
Confidence 2468888999999999999999999 777889999876 9999999975443 23333321 235788888
Q ss_pred HHHHHHhc
Q 007779 234 QGVLRDVL 241 (590)
Q Consensus 234 ~~a~~~Il 241 (590)
.+.+..+.
T Consensus 210 ~~~~~~l~ 217 (240)
T PRK05665 210 SKGVASLA 217 (240)
T ss_pred HHHHHHcC
Confidence 88887776
|
|
| >PRK08250 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-16 Score=159.15 Aligned_cols=140 Identities=13% Similarity=-0.008 Sum_probs=103.8
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhhh-----hHHHHHHHHh-cCCCCc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEAF-----KVLDTILRSA-KGDLKD 132 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~g-----~~~~~~i~~~-~~~~Pi 132 (590)
.++++-|.++++++-.. .+ ..+. .++.+|+|||+.||.+|.+. ++.. ...++ |+.+ ..++|+
T Consensus 19 ~~~~~~g~~~~~~~~~~---g~---~~p~----~~~~~d~vii~GGp~~~~~~~~~~p~~~~~~~~~~-i~~~~~~~~Pv 87 (235)
T PRK08250 19 KWAENRGYDISYSRVYA---GE---ALPE----NADGFDLLIVMGGPQSPRTTREECPYFDSKAEQRL-INQAIKAGKAV 87 (235)
T ss_pred HHHHHCCCeEEEEEccC---CC---CCCC----CccccCEEEECCCCCChhhccccccccchHHHHHH-HHHHHHcCCCE
Confidence 66777888888865321 10 1111 14568999999999998631 1221 23556 6654 457999
Q ss_pred cc-ccchHHHHhHhCceeeccCCCCcCcccc-----CC----------ceeEEeccchhccccCCCcEEEEe-ecCCcEE
Q 007779 133 EE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----EG----------ERRAMNTFWPLLMRALPPDVIFIA-DPEGSIM 195 (590)
Q Consensus 133 lG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~~----------~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im 195 (590)
|| |+|||.|+.+|||+|.+. +..++|... .| ..+.+.++|+..+ .+|++.+++| ++.+.++
T Consensus 88 lGIC~G~Qlla~alGg~V~~~-~~~e~G~~~v~lt~~g~~d~l~~~~~~~~~v~~~H~d~~-~lP~~a~~LA~s~~~~~q 165 (235)
T PRK08250 88 IGVCLGAQLIGEALGAKYEHS-PEKEIGYFPITLTEAGLKDPLLSHFGSTLTVGHWHNDMP-GLTDQAKVLATSEGCPRQ 165 (235)
T ss_pred EEEChhHHHHHHHhCceeccC-CCCceeEEEEEEccccccCchhhcCCCCcEEEEEeccee-cCCCCCEEEECCCCCCce
Confidence 99 999999999999999998 667777653 11 3688899999875 6999999999 7778899
Q ss_pred EEEcC---CCCcccCCCchh
Q 007779 196 GGGGS---IGPHYSGNDPRE 212 (590)
Q Consensus 196 ~~~h~---~gvQfHPEs~~~ 212 (590)
|++.. ||+|||||-...
T Consensus 166 a~~~~~~~~g~QfHPE~~~~ 185 (235)
T PRK08250 166 IVQYSNLVYGFQCHMEFTVE 185 (235)
T ss_pred EEEeCCCEEEEeecCcCCHH
Confidence 99986 999999997444
|
|
| >PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-16 Score=155.06 Aligned_cols=152 Identities=9% Similarity=0.016 Sum_probs=101.4
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC-chhhhhHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR-EDEAFKVLDTI 122 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~-~~~~g~~~~~~ 122 (590)
++.++|+=+. .+++++|.++.+++++ .+ ++.+|+||| ||+|.|.+ .+......+.
T Consensus 2 ~~~v~~~~~~~~~~~~~~l~~~G~~~~~~~~~----~~------------~~~~d~iii-~G~~~~~~~~~~~~~~~~~- 63 (200)
T PRK13143 2 MIVIIDYGVGNLRSVSKALERAGAEVVITSDP----EE------------ILDADGIVL-PGVGAFGAAMENLSPLRDV- 63 (200)
T ss_pred eEEEEECCCccHHHHHHHHHHCCCeEEEECCH----HH------------HccCCEEEE-CCCCCHHHHHHHHHHHHHH-
Confidence 5667776655 6788899999988653 11 345699999 78776652 1222345666
Q ss_pred HHHh-cCCCCccc-ccchHHHHhH------------hCceeeccCCC----CcCcccc----CC-------ceeEEeccc
Q 007779 123 LRSA-KGDLKDEE-EVSKAQLGAF------------FSAMTIRANAF----PEATQWS----EG-------ERRAMNTFW 173 (590)
Q Consensus 123 i~~~-~~~~PilG-CLGhQ~i~~~------------~G~~v~~~~~~----~~hG~~s----~~-------~~~~~~ryH 173 (590)
++++ ..++|+|| |+|||.|+.+ +|++|.+. +. ++.|-.+ .+ ..+.+.+||
T Consensus 64 i~~~~~~~~PilgIC~G~q~l~~~~~~g~~~~~lg~~~g~v~~~-~~~~~~~~~g~~~v~~~~~~~l~~~l~~~~~~~~H 142 (200)
T PRK13143 64 ILEAARSGKPFLGICLGMQLLFESSEEGGGVRGLGLFPGRVVRF-PAGVKVPHMGWNTVKVVKDCPLFEGIDGEYVYFVH 142 (200)
T ss_pred HHHHHHcCCCEEEECHHHHHHhhhhccCCCCCCcceeeEEEEEc-CCCCCCCeecceEEEEcCCChhhccCCCcEEEEEe
Confidence 5654 45699999 9999999986 79999876 32 2223221 11 123467899
Q ss_pred hhccccCCCcEEEEe-ecCCcE-EEE-EcC--CCCcccCCC--chhhH-HHHHHHH
Q 007779 174 PLLMRALPPDVIFIA-DPEGSI-MGG-GGS--IGPHYSGND--PREMR-LVGALRE 221 (590)
Q Consensus 174 sl~v~~~p~~l~v~a-~~~g~i-m~~-~h~--~gvQfHPEs--~~~m~-L~~~L~k 221 (590)
|+.+. +|+.+++++ ++++.. ++. .+. ||+|||||. +.+.+ +++|++.
T Consensus 143 s~~~~-~~~~~~~la~~~~~~~~~~~~~~~~~~gvQfHPE~~~~~g~~i~~~f~~~ 197 (200)
T PRK13143 143 SYYAY-PDDEDYVVATTDYGIEFPAAVCNDNVFGTQFHPEKSGETGLKILENFVEL 197 (200)
T ss_pred eeeeC-CCCcceEEEEEcCCCEEEEEEEcCCEEEEeCCCccchHHHHHHHHHHHHH
Confidence 99885 455688888 666643 333 333 999999998 44545 7777754
|
|
| >PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-16 Score=129.36 Aligned_cols=64 Identities=27% Similarity=0.456 Sum_probs=54.3
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcC
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEL 285 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~ 285 (590)
++++|+++.+|++||++|++++|+.|+ +|+++|.|+||||+++|+||||++||+||++||++++
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i~-------~g~~s~~qiaAfL~al~~kget~~Eiag~~~am~~~a 65 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAIL-------DGEVSDAQIAAFLMALRMKGETPEEIAGFAKAMREHA 65 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHHH-------TTSS-HHHHHHHHHHHHHH---HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999 9999999999999999999999999999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A .... |
| >cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.6e-15 Score=153.06 Aligned_cols=139 Identities=10% Similarity=0.007 Sum_probs=91.3
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhc-----C-CCCcc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-----G-DLKDE 133 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~-----~-~~Pil 133 (590)
.++++.|..|..++.|.- .++.. ..++..||||+..||-+.. ..+.......|++.+. | .+|++
T Consensus 27 ~~l~~aG~~vvpi~~~~~-~~~l~--------~~l~~~dG~l~~Gg~~~~~-~~~~~~~~~~l~~~a~~~~~~g~~~Pv~ 96 (273)
T cd01747 27 KFLESAGARVVPIWINES-EEYYD--------KLFKSINGILFPGGAVDID-TSGYARTAKIIYNLALERNDAGDYFPVW 96 (273)
T ss_pred HHHHHCCCeEEEEEeCCc-HHHHH--------HHHhhCCEEEECCCCCcCC-ccccchHHHHHHHHHHHhhhcCCCCcEE
Confidence 455666999998888731 22111 1255679999955553332 1122222222244432 1 38999
Q ss_pred c-ccchHHHHhHhCceeec-cCCCCcCcccc------CC------------------ceeEEeccchhccc--cCC----
Q 007779 134 E-EVSKAQLGAFFSAMTIR-ANAFPEATQWS------EG------------------ERRAMNTFWPLLMR--ALP---- 181 (590)
Q Consensus 134 G-CLGhQ~i~~~~G~~v~~-~~~~~~hG~~s------~~------------------~~~~~~ryHsl~v~--~~p---- 181 (590)
| |||+|.|+.++||++.. . +...||.+. ++ +...+.+|||+.|+ ++|
T Consensus 97 GiClG~QlL~~~~gg~~~~~~-~~~~~~~~~~l~~t~~~~~s~lF~~~p~~l~~~l~~~~~~~~~Hs~~v~~~~~~~~~~ 175 (273)
T cd01747 97 GTCLGFELLTYLTSGETLLLE-ATEATNSALPLNFTEDALQSRLFKRFPPDLLKSLATEPLTMNNHRYGISPENFTENGL 175 (273)
T ss_pred EEcHHHHHHHHHhCCCccccC-CCccccceEEEEEccccccChhhhcCCHHHHHHHhcccHHHhhcccccCHhhcccccc
Confidence 9 99999999999998554 5 677888753 11 13356799999993 555
Q ss_pred --CcEEEEe-ecC--Cc--EEEEEcC----CCCcccCCC
Q 007779 182 --PDVIFIA-DPE--GS--IMGGGGS----IGPHYSGND 209 (590)
Q Consensus 182 --~~l~v~a-~~~--g~--im~~~h~----~gvQfHPEs 209 (590)
..+.+++ +.| |. ||+++|+ ||||||||.
T Consensus 176 l~~~~~vla~~~d~~g~~fis~ie~~~~pi~gvQFHPEk 214 (273)
T cd01747 176 LSDFFNVLTTNDDWNGVEFISTVEAYKYPIYGVQWHPEK 214 (273)
T ss_pred cccceEEEEEEecCCCceEEEEEEecCCceEEEecCCCc
Confidence 4578888 433 43 7999998 999999997
|
Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >PRK13525 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-14 Score=139.45 Aligned_cols=150 Identities=16% Similarity=0.185 Sum_probs=103.0
Q ss_pred ccccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhhhhHHHHHHHHh-cCCC
Q 007779 55 ADLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEAFKVLDTILRSA-KGDL 130 (590)
Q Consensus 55 ~~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~g~~~~~~i~~~-~~~~ 130 (590)
-|++| ..++.+|.++..+.++ .. ++.+|+|||+.||+.-.+. .+.-...+. ++.+ ...+
T Consensus 11 g~~~~~~~~l~~~g~~~~~~~~~----~~------------l~~~dgiii~GG~~~~~~~~~~~~~~~~~-i~~~~~~g~ 73 (189)
T PRK13525 11 GAVREHLAALEALGAEAVEVRRP----ED------------LDEIDGLILPGGESTTMGKLLRDFGLLEP-LREFIASGL 73 (189)
T ss_pred cCHHHHHHHHHHCCCEEEEeCCh----hH------------hccCCEEEECCCChHHHHHHHHhccHHHH-HHHHHHCCC
Confidence 34444 4466778888777542 11 4567999999998653210 011123456 5554 4569
Q ss_pred Cccc-ccchHHHHhHhCc-----------eeeccCCCC-cCcccc-----C--CceeEEeccchhccccCCCcEEEEeec
Q 007779 131 KDEE-EVSKAQLGAFFSA-----------MTIRANAFP-EATQWS-----E--GERRAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 131 PilG-CLGhQ~i~~~~G~-----------~v~~~~~~~-~hG~~s-----~--~~~~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
|++| |.|+|.|+.++|+ +|.+. +.+ ..|... + ++.+.+...|+..|..+|++++++|.+
T Consensus 74 PilGIC~G~QlL~~~~gg~~~~~lg~~~~~v~~~-~~g~~~g~~~~~~~~~~~~~~~~~~~~H~d~v~~lp~~~~vlA~~ 152 (189)
T PRK13525 74 PVFGTCAGMILLAKEIEGYEQEHLGLLDITVRRN-AFGRQVDSFEAELDIKGLGEPFPAVFIRAPYIEEVGPGVEVLATV 152 (189)
T ss_pred eEEEECHHHHHHHhhcccCCCCceeeEEEEEEEc-cCCCceeeEEecccccCCCCCeEEEEEeCceeeccCCCcEEEEEc
Confidence 9999 9999999999999 67665 332 333221 1 237899999999999999999999944
Q ss_pred CCcEEEEEcC--CCCcccCCCchhhH-HHHHHHHh
Q 007779 191 EGSIMGGGGS--IGPHYSGNDPREMR-LVGALREV 222 (590)
Q Consensus 191 ~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl 222 (590)
++.+.+++.+ ||+|||||-....+ +++|++.+
T Consensus 153 ~~~~~~~~~~~~~g~QfHPE~~~~~~~~~~f~~~~ 187 (189)
T PRK13525 153 GGRIVAVRQGNILATSFHPELTDDTRVHRYFLEMV 187 (189)
T ss_pred CCEEEEEEeCCEEEEEeCCccCCCchHHHHHHHHh
Confidence 4555567766 99999999866666 78887543
|
|
| >PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.9e-14 Score=137.53 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=93.8
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh------HHHHHHHHhc
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK------VLDTILRSAK 127 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~------~~~~~i~~~~ 127 (590)
|+-| ++|+.+|.++.++++++ + ++.+|+| |.||+|+|. ++.. ..+. |++ .
T Consensus 11 N~~s~~~al~~~g~~~~~v~~~~----~------------l~~~D~l-IlPG~g~~~---~~~~~L~~~gl~~~-i~~-~ 68 (192)
T PRK13142 11 NISNVKRAIEHLGYEVVVSNTSK----I------------IDQAETI-ILPGVGHFK---DAMSEIKRLNLNAI-LAK-N 68 (192)
T ss_pred cHHHHHHHHHHcCCCEEEEeCHH----H------------hccCCEE-EECCCCCHH---HHHHHHHHCCcHHH-HHH-h
Confidence 6666 78999999999998762 1 2345778 669999987 4432 3566 665 4
Q ss_pred CCCCccc-ccchHHHHhHh--C---------ceeeccC---CCCcCccccCC-cee-----EEeccchhccccCCCcEEE
Q 007779 128 GDLKDEE-EVSKAQLGAFF--S---------AMTIRAN---AFPEATQWSEG-ERR-----AMNTFWPLLMRALPPDVIF 186 (590)
Q Consensus 128 ~~~PilG-CLGhQ~i~~~~--G---------~~v~~~~---~~~~hG~~s~~-~~~-----~~~ryHsl~v~~~p~~l~v 186 (590)
.++|+|| |+|||.|++.- | ++|.|.+ +.|+-| |..- ... .+...||+.+. .++...+
T Consensus 69 ~g~PvlGIClGmQlL~~~~~eg~~~GLgll~~~V~rf~~~~~vph~G-Wn~~~~~~~l~~~~~yFVhSy~v~-~~~~v~~ 146 (192)
T PRK13142 69 TDKKMIGICLGMQLMYEHSDEGDASGLGFIPGNISRIQTEYPVPHLG-WNNLVSKHPMLNQDVYFVHSYQAP-MSENVIA 146 (192)
T ss_pred CCCeEEEECHHHHHHhhhcccCCcCccCceeEEEEECCCCCCCCccc-ccccCCCCcccccEEEEECCCeEC-CCCCEEE
Confidence 5799999 99999999887 3 4455552 112222 2210 122 26778999994 3455555
Q ss_pred EeecCC-cEEEEEcC--CCCcccCCC--chhhH-HHHHHH
Q 007779 187 IADPEG-SIMGGGGS--IGPHYSGND--PREMR-LVGALR 220 (590)
Q Consensus 187 ~a~~~g-~im~~~h~--~gvQfHPEs--~~~m~-L~~~L~ 220 (590)
++.-++ .+-++++. ||+|||||- ..|.. |++|+.
T Consensus 147 ~~~yg~~~~~~v~~~n~~g~QFHPEkS~~~G~~ll~nf~~ 186 (192)
T PRK13142 147 YAQYGADIPAIVQFNNYIGIQFHPEKSGTYGLQILRQAIQ 186 (192)
T ss_pred EEECCCeEEEEEEcCCEEEEecCcccCcHhHHHHHHHHHh
Confidence 553334 46666655 999999997 67777 777764
|
|
| >PLN02617 imidazole glycerol phosphate synthase hisHF | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-13 Score=151.66 Aligned_cols=157 Identities=12% Similarity=0.034 Sum_probs=105.7
Q ss_pred cceeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc----hhhhh
Q 007779 48 RIRLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE----DEAFK 117 (590)
Q Consensus 48 ~~~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~----~~~g~ 117 (590)
..+|.+.| |+-| +.++.+|.++.+++++. + ++.+|+||| ||+|++... .+.+
T Consensus 6 ~~~i~iiDyG~GN~~sl~~al~~~G~~v~~v~~~~----~------------l~~~D~lIl-pG~gs~~~~m~~L~~~g- 67 (538)
T PLN02617 6 DSEVTLLDYGAGNVRSVRNAIRHLGFTIKDVQTPE----D------------ILNADRLIF-PGVGAFGSAMDVLNNRG- 67 (538)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHCCCeEEEECChh----h------------hccCCEEEE-CCCCCHHHHHHHHHHcC-
Confidence 44678888 6777 88999999998886421 1 345688988 999987621 0011
Q ss_pred HHHHHHHH-hcCCCCccc-ccchHHHHhHh---------C---ceeeccC-----CCCcCcccc----CC-------cee
Q 007779 118 VLDTILRS-AKGDLKDEE-EVSKAQLGAFF---------S---AMTIRAN-----AFPEATQWS----EG-------ERR 167 (590)
Q Consensus 118 ~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~---------G---~~v~~~~-----~~~~hG~~s----~~-------~~~ 167 (590)
..+. |+. +...+|+|| |+|+|.|+.++ | |.|.+.+ +.|++|-+. .+ ..+
T Consensus 68 l~~~-i~~~i~~g~PvLGIC~G~QlLa~~~~E~g~~~glg~l~G~v~~~~~~~~~~vp~iGw~~V~~~~~spL~~~l~~~ 146 (538)
T PLN02617 68 MAEA-LREYIQNDRPFLGICLGLQLLFESSEENGPVEGLGVIPGVVGRFDSSNGLRVPHIGWNALQITKDSELLDGVGGR 146 (538)
T ss_pred HHHH-HHHHHHcCCCEEEECHHHHHHhhhhhhcCCccCcccccceEEECCccCCCCCCeecceEEEecCCChhHhcCCCc
Confidence 3445 444 445799999 99999999874 2 5665531 345666443 11 134
Q ss_pred EEeccchhccccCCCc-EEEEe---ecCCcEEEEEcC--CCCcccCCC--chhhH-HHHHHHHhh
Q 007779 168 AMNTFWPLLMRALPPD-VIFIA---DPEGSIMGGGGS--IGPHYSGND--PREMR-LVGALREVL 223 (590)
Q Consensus 168 ~~~ryHsl~v~~~p~~-l~v~a---~~~g~im~~~h~--~gvQfHPEs--~~~m~-L~~~L~kl~ 223 (590)
.+.++||+.+..+|.. ..+.+ ..++.|+|+++. ||+|||||. +.|.+ +++|++.+.
T Consensus 147 ~vy~vHSy~v~~~p~~~~~v~a~~~~g~~~IaAI~~gnI~GVQFHPE~s~~~G~~L~~nFl~~~~ 211 (538)
T PLN02617 147 HVYFVHSYRATPSDENKDWVLATCNYGGEFIASVRKGNVHAVQFHPEKSGATGLSILRRFLEPKS 211 (538)
T ss_pred EEEEEeEEEEEecCCCCcEEEEEEccCCCcEEEEEeCCEEEEEcCCccCchhHHHHHHHHHHhhh
Confidence 5778999998666543 22333 235689999998 999999997 45655 788877664
|
|
| >TIGR00337 PyrG CTP synthase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-13 Score=149.79 Aligned_cols=110 Identities=8% Similarity=-0.030 Sum_probs=82.8
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc---------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------- 162 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------- 162 (590)
++.+|+|+++||||+|. ..|. ++. ++.+. .++|+|| |||||.|+.+||+.|.++ +..+|....
T Consensus 341 L~~~dGIiLpGG~G~~~---~~g~-i~a-i~~a~e~~iP~LGIClG~Qll~i~~grnv~gl-~~A~s~Ef~~~~~~pVi~ 414 (525)
T TIGR00337 341 LKGVDGILVPGGFGERG---VEGK-ILA-IKYARENNIPFLGICLGMQLAVIEFARNVLGL-KGANSTEFDPETKYPVVD 414 (525)
T ss_pred hcCCCEEEeCCCCCChh---hcCh-HHH-HHHHHHcCCCEEEEcHHHHHHHHHHHHHhcCC-CCCCccccCCCCCCCeee
Confidence 66789999999999997 4454 345 56544 6799999 999999999999999998 666662211
Q ss_pred --C-------------------------------Cc-eeEEeccchhcccc-----C-CCcEEEEe-ecC-CcEEEEEcC
Q 007779 163 --E-------------------------------GE-RRAMNTFWPLLMRA-----L-PPDVIFIA-DPE-GSIMGGGGS 200 (590)
Q Consensus 163 --~-------------------------------~~-~~~~~ryHsl~v~~-----~-p~~l~v~a-~~~-g~im~~~h~ 200 (590)
+ |+ .+...+.|.+.|++ + .+.|+++| ++| |.|+|++++
T Consensus 415 l~~~~~~~~~~GGTmRLG~h~v~i~~gS~L~~iyG~~~i~erhrHry~VNs~h~q~l~~~GL~vsa~s~Dgg~VEaIE~~ 494 (525)
T TIGR00337 415 LLPEQKDISDLGGTMRLGLYPCILKPGTLAFKLYGKEEVYERHRHRYEVNNEYREQLENKGLIVSGTSPDGRLVEIIELP 494 (525)
T ss_pred ccCcccccccCCceeeccceEEEECCCChHHHHhCCCceeecccceEEECHHHHHhhhhCCeEEEEEECCCCEEEEEEEC
Confidence 0 00 22445678888842 2 36799999 777 589999976
Q ss_pred -----CCCcccCCC
Q 007779 201 -----IGPHYSGND 209 (590)
Q Consensus 201 -----~gvQfHPEs 209 (590)
.|||||||-
T Consensus 495 ~hpfflGVQwHPE~ 508 (525)
T TIGR00337 495 DHPFFVACQFHPEF 508 (525)
T ss_pred CCCeEEEEecCCCC
Confidence 599999996
|
CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5' upstream of enolase in both beta (Nitrosomonas europaea) and gamma (E.coli) subdivisions of proteobacterium (FEMS Microbiol Lett 1998 Aug 1;165(1):153-7). |
| >cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-12 Score=126.99 Aligned_cols=140 Identities=13% Similarity=0.168 Sum_probs=98.0
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc--hhhhhHHHHHHHHhcCCCCccc-cc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE--DEAFKVLDTILRSAKGDLKDEE-EV 136 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~--~~~g~~~~~~i~~~~~~~PilG-CL 136 (590)
..++++|+++.+++... . ++.+|+||++.|+-.-.+. .+. ...+.|.+.+...+|+|| |.
T Consensus 15 ~~l~~~g~~v~~v~~~~----~------------l~~~dgiii~Gg~~~~~~~~~~~~-~~~~~i~~~~~~g~PvlGiC~ 77 (183)
T cd01749 15 RALERLGVEVIEVRTPE----D------------LEGIDGLIIPGGESTTIGKLLRRT-GLLDPLREFIRAGKPVFGTCA 77 (183)
T ss_pred HHHHHCCCeEEEECCHH----H------------hccCCEEEECCchHHHHHHHHHhC-CHHHHHHHHHHcCCeEEEECH
Confidence 67889999999887631 1 4466999999987532210 011 234552334456799999 99
Q ss_pred chHHHHhHhCc------------eeeccCCCC-cCccc----c---CC-ceeEEeccchhccccCCCcEEEEeecCCcEE
Q 007779 137 SKAQLGAFFSA------------MTIRANAFP-EATQW----S---EG-ERRAMNTFWPLLMRALPPDVIFIADPEGSIM 195 (590)
Q Consensus 137 GhQ~i~~~~G~------------~v~~~~~~~-~hG~~----s---~~-~~~~~~ryHsl~v~~~p~~l~v~a~~~g~im 195 (590)
|+|.|+.++|+ +|.|. +++ .-|.. . .+ +++.+...|...|..+|++++++|..|+.+.
T Consensus 78 G~qlL~~~~~~~~~~~glG~~~~~v~~~-~~g~~~g~~~~~l~~~~~~~~~~~~~~~h~~~v~~~p~~~~~la~~~~~~~ 156 (183)
T cd01749 78 GLILLAKEVEDQGGQPLLGLLDITVRRN-AFGRQVDSFEADLDIPGLGLGPFPAVFIRAPVIEEVGPGVEVLAEYDGKIV 156 (183)
T ss_pred HHHHHHHHhcccCCCCccCceeEEEEee-ccccccceEEEcCCCCcCCCCccEEEEEECcEEEEcCCCcEEEEecCCEEE
Confidence 99999999998 78775 332 11211 1 12 4788899999999999999999995456656
Q ss_pred EEEcC--CCCcccCCCchhhHHHH
Q 007779 196 GGGGS--IGPHYSGNDPREMRLVG 217 (590)
Q Consensus 196 ~~~h~--~gvQfHPEs~~~m~L~~ 217 (590)
+++.+ ||+|||||-....++.+
T Consensus 157 a~~~~~~~g~qfHPE~~~~~~~~~ 180 (183)
T cd01749 157 AVRQGNVLATSFHPELTDDTRIHE 180 (183)
T ss_pred EEEECCEEEEEcCCccCCCcchhh
Confidence 78776 99999999765555433
|
Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis. Glutamine amidotransferase (GATase) activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. This group contains proteins like Bacillus subtilus YaaE and Plasmodium falciparum Pdx2 which are members of the triad glutamine aminotransferase family and function in a pathway for the biosynthesis of vitamin B6. |
| >TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.2e-12 Score=125.90 Aligned_cols=138 Identities=12% Similarity=0.119 Sum_probs=95.2
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC-chhhhhHHHHHHHH-hcCCCCccc-cc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR-EDEAFKVLDTILRS-AKGDLKDEE-EV 136 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~-~~~~g~~~~~~i~~-~~~~~PilG-CL 136 (590)
+.|+++|.++.+++.++ + ++.+|+|||..|++.-.. ..+.-...+. |++ ....+|++| |.
T Consensus 16 ~~l~~~g~~~~~v~~~~----~------------l~~~d~liipGG~~~~~~~l~~~~~l~~~-i~~~~~~g~pilGIC~ 78 (184)
T TIGR03800 16 RALEALGVEGVEVKRPE----Q------------LDEIDGLIIPGGESTTLSRLLDKYGMFEP-LRNFILSGLPVFGTCA 78 (184)
T ss_pred HHHHHCCCEEEEECChH----H------------hccCCEEEECCCCHHHHHHHHHhccHHHH-HHHHHHcCCcEEEECH
Confidence 67889999998886632 1 345689999988765421 0011123455 554 455799999 99
Q ss_pred chHHHHhHh-----------CceeeccCCCCc-----CccccC-C--c-eeEEeccchhccccCCCcEEEEeecCCcEEE
Q 007779 137 SKAQLGAFF-----------SAMTIRANAFPE-----ATQWSE-G--E-RRAMNTFWPLLMRALPPDVIFIADPEGSIMG 196 (590)
Q Consensus 137 GhQ~i~~~~-----------G~~v~~~~~~~~-----hG~~s~-~--~-~~~~~ryHsl~v~~~p~~l~v~a~~~g~im~ 196 (590)
|+|.|++.+ +++|.|. ++.. |-.+.. + + ++.+.-.|.-.|..+|++++++|..++.+.|
T Consensus 79 G~qlL~~~~~~~~~~~lg~~~~~v~~~-~~g~~~~s~~~~l~~~~~~~~~~~~~~~h~~~v~~lp~~~~vla~~~~~~~a 157 (184)
T TIGR03800 79 GLIMLAKEIIGQKEGYLGLLDMTVERN-AYGRQVDSFEAEVDIKGVGDDPITGVFIRAPKIVSVGNGVEILAKVGNRIVA 157 (184)
T ss_pred HHHHHHhhhccCCCCccCcEEEEEEee-ccCCccccEEEEeecccCCCCcceEEEEcCCCcccCCCCeEEEEEeCCeeEE
Confidence 999999998 2577665 4321 111111 1 1 4677778999998999999999955567778
Q ss_pred EEcC--CCCcccCCCchhhHH
Q 007779 197 GGGS--IGPHYSGNDPREMRL 215 (590)
Q Consensus 197 ~~h~--~gvQfHPEs~~~m~L 215 (590)
++.+ ||+|||||-....++
T Consensus 158 ~~~~~~~gvQfHPE~~~~~~~ 178 (184)
T TIGR03800 158 VRQGNILVSSFHPELTDDHRV 178 (184)
T ss_pred EEeCCEEEEEeCCccCCCchH
Confidence 8877 999999997555553
|
Pyridoxal 5'-phosphate (PLP) is synthesized by the PdxA/PdxJ pathway in some species (mostly within the gamma subdivision of the proteobacteria) and by the Pdx1/Pdx2 pathway in most other organisms. This family describes Pdx2, the glutaminase subunit of the PLP synthase. |
| >PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-12 Score=129.29 Aligned_cols=139 Identities=19% Similarity=0.169 Sum_probs=87.6
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCC--C-------CCc----hhhhh--HHHHHHH
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTR--P-------LRE----DEAFK--VLDTILR 124 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~--P-------~~~----~~~g~--~~~~~i~ 124 (590)
.++++.|..+..+..+. +.++.. ..++..|||+|+.|+-+ | ... +..-. -+.+ ++
T Consensus 31 ~~i~~aG~~pv~ip~~~-~~~~~~--------~~l~~idGlll~GG~~Di~P~~y~~~~~~~~~~~~~~rd~~e~~l-~~ 100 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDA-DDEELD--------ELLDRIDGLLLPGGGSDIDPALYGEEPSPESGYIDPERDIFELAL-IR 100 (217)
T ss_dssp HHHHHTT-EEEEE-SS---HHHHH--------HHHHCSSEEEE---SS-T-GGGGT---BTTSHHHHHHHHHHHHHH-HH
T ss_pred HHHHHcCCEEEEEccCC-CHHHHH--------HHHhhcCEEEEcCCccchhHhhcCCcccccCCCcCHHHHHHHHHH-HH
Confidence 45666799888888874 222211 23666799999999841 1 100 00011 1223 44
Q ss_pred Hh-cCCCCccc-ccchHHHHhHhCceeeccCCC----CcCcc---c--c------C--------C-ceeEEeccchhccc
Q 007779 125 SA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAF----PEATQ---W--S------E--------G-ERRAMNTFWPLLMR 178 (590)
Q Consensus 125 ~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~----~~hG~---~--s------~--------~-~~~~~~ryHsl~v~ 178 (590)
.. ...+|||| |.|+|.|..+|||++..-.+. ..|-+ . + . + +.+.+..||...|+
T Consensus 101 ~a~~~~~PilGICrG~Q~lnv~~GGtl~q~~~~~~~~~~~~~~~~~~~~h~v~i~~~s~l~~~~~~~~~~vns~Hhq~v~ 180 (217)
T PF07722_consen 101 NALGRGKPILGICRGMQLLNVAFGGTLYQDIPDQPGFPDHRQHPQDFPSHPVRIVPGSLLAKILGSEEIEVNSFHHQAVK 180 (217)
T ss_dssp HHCCTT--EEEETHHHHHHHHHCCSSEESCCCCSS-EEECEE-S-TS--EEEEEETTSTCCCTSHHCTEEEEEEECEEEC
T ss_pred HHHhcCCCEEEEcHHHHHHHHHhCCCceeecccCcCcccccccccccccccceeccCchHHHHhCcCcceeecchhhhhh
Confidence 43 34699999 999999999999999864222 11211 0 0 1 1 37889999999999
Q ss_pred cCCCcEEEEe-ecCCcEEEEEcC------CCCcccCC
Q 007779 179 ALPPDVIFIA-DPEGSIMGGGGS------IGPHYSGN 208 (590)
Q Consensus 179 ~~p~~l~v~a-~~~g~im~~~h~------~gvQfHPE 208 (590)
.+.+.|+++| +.||.|+|+.+. +|||||||
T Consensus 181 ~l~~~l~v~A~s~Dg~iEaie~~~~~~~~~GvQwHPE 217 (217)
T PF07722_consen 181 PLGEGLRVTARSPDGVIEAIESPEHKYPILGVQWHPE 217 (217)
T ss_dssp CHHCCEEEEEEECTSSEEEEEECCESS-EEEESS-CC
T ss_pred ccCCCceEEEEecCCcEEEEEEcCCCCCEEEEEeCCC
Confidence 9999999999 889999999886 99999999
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D. |
| >PRK05380 pyrG CTP synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=136.27 Aligned_cols=148 Identities=12% Similarity=0.029 Sum_probs=93.2
Q ss_pred hCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHh-cCCCCccc-ccchHHHH
Q 007779 65 LGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLG 142 (590)
Q Consensus 65 lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~-~~~~PilG-CLGhQ~i~ 142 (590)
++.++.+...|+..++..+ ....++.+|+||+++|||.+. ..| .+++ ++.+ ..++|+|| |+|+|.|+
T Consensus 318 ~~~~v~i~wIdse~l~~~~------~~~~L~~~DGIIlpGGfG~~~---~~g-~i~~-i~~a~e~~iPiLGIClGmQll~ 386 (533)
T PRK05380 318 NDVKVNIKWIDSEDLEEEN------VAELLKGVDGILVPGGFGERG---IEG-KILA-IRYARENNIPFLGICLGMQLAV 386 (533)
T ss_pred cCCeeEEEEEChhhccCcc------hhhHhhcCCEEEecCCCCccc---ccc-HHHH-HHHHHHCCCcEEEEchHHHHHH
Confidence 4678888888865554210 012266789999999999976 334 3455 5554 45799999 99999999
Q ss_pred hHhCceeec---cC--CCC-----------cC-------ccc-----c-----C--------Cc-eeEEeccchhcccc-
Q 007779 143 AFFSAMTIR---AN--AFP-----------EA-------TQW-----S-----E--------GE-RRAMNTFWPLLMRA- 179 (590)
Q Consensus 143 ~~~G~~v~~---~~--~~~-----------~h-------G~~-----s-----~--------~~-~~~~~ryHsl~v~~- 179 (590)
.+||+.+.. ++ .+. .| |.+ . . |+ .+.-..-|.+.|++
T Consensus 387 va~Ggnv~g~qda~s~E~~~~t~~pvI~~~~~q~~~~~~ggtmrlg~h~v~i~~gS~l~~iyg~~~i~ErhrHryeVNs~ 466 (533)
T PRK05380 387 IEFARNVLGLEDANSTEFDPDTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEIYGKEEIYERHRHRYEVNNK 466 (533)
T ss_pred HHhcccccCcccCcccccCCCCCCCeEeeccccccccccCCcccccceeEEECCCChHHHHhCCCceeeecccceecCHH
Confidence 999999842 21 000 01 100 0 0 11 12222345666632
Q ss_pred ----C-CCcEEEEe-ecC-CcEEEEEcC-----CCCcccCCC---c-hhhH-HHHHHHHhh
Q 007779 180 ----L-PPDVIFIA-DPE-GSIMGGGGS-----IGPHYSGND---P-REMR-LVGALREVL 223 (590)
Q Consensus 180 ----~-p~~l~v~a-~~~-g~im~~~h~-----~gvQfHPEs---~-~~m~-L~~~L~kl~ 223 (590)
+ ...|+++| ++| |.|+|+.++ .|||||||- + .... +..|++...
T Consensus 467 h~qal~~~GL~vsa~s~DgglVEaIEl~~hpfflGVQwHPE~~s~p~~~~pLF~~FV~Aa~ 527 (533)
T PRK05380 467 YREQLEKAGLVFSGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAAL 527 (533)
T ss_pred HHHHHhhcCeEEEEEcCCCCcEEEEEeCCCCEEEEEeCCCCCCCCCCchHHHHHHHHHHHH
Confidence 3 23799999 766 489999976 599999995 2 2223 677766553
|
|
| >COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.6e-11 Score=119.64 Aligned_cols=149 Identities=12% Similarity=0.092 Sum_probs=92.4
Q ss_pred ccccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCC-Cchhhh--hHHHHHHHHhcCC
Q 007779 55 ADLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPL-REDEAF--KVLDTILRSAKGD 129 (590)
Q Consensus 55 ~~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~-~~~~~g--~~~~~~i~~~~~~ 129 (590)
.||-| .-|+.+|.++.|.++.+. ++..|+||+ ||=|+=. ..+... ...+.|.+....+
T Consensus 12 GNL~Sv~~Aler~G~~~~vs~d~~~----------------i~~AD~liL-PGVGaf~~am~~L~~~gl~~~i~~~~~~~ 74 (204)
T COG0118 12 GNLRSVKKALERLGAEVVVSRDPEE----------------ILKADKLIL-PGVGAFGAAMANLRERGLIEAIKEAVESG 74 (204)
T ss_pred chHHHHHHHHHHcCCeeEEecCHHH----------------HhhCCEEEe-cCCCCHHHHHHHHHhcchHHHHHHHHhcC
Confidence 36666 678999999988877532 223377766 8988833 111111 2355623334456
Q ss_pred CCccc-ccchHHHHhH------------hCceeeccCC----CCcCcccc----C------C----ceeEEeccchhccc
Q 007779 130 LKDEE-EVSKAQLGAF------------FSAMTIRANA----FPEATQWS----E------G----ERRAMNTFWPLLMR 178 (590)
Q Consensus 130 ~PilG-CLGhQ~i~~~------------~G~~v~~~~~----~~~hG~~s----~------~----~~~~~~ryHsl~v~ 178 (590)
+|+|| |||+|+|.+. +.|+|.|.++ .||-|=++ + | ..|- --|||.+.
T Consensus 75 kP~LGIClGMQlLfe~SeE~~~~~GLg~i~G~V~r~~~~~~kvPHMGWN~l~~~~~~~l~~gi~~~~~~Y--FVHSY~~~ 152 (204)
T COG0118 75 KPFLGICLGMQLLFERSEEGGGVKGLGLIPGKVVRFPAEDLKVPHMGWNQVEFVRGHPLFKGIPDGAYFY--FVHSYYVP 152 (204)
T ss_pred CCEEEEeHhHHhhhhcccccCCCCCcceecceEEEcCCCCCCCCccccceeeccCCChhhcCCCCCCEEE--EEEEEeec
Confidence 99999 9999999763 3467887742 35555332 1 1 2333 34999997
Q ss_pred cCCCcEEEEeecCC-cEEEEEcC---CCCcccCCC--chhhH-HHHHHHHh
Q 007779 179 ALPPDVIFIADPEG-SIMGGGGS---IGPHYSGND--PREMR-LVGALREV 222 (590)
Q Consensus 179 ~~p~~l~v~a~~~g-~im~~~h~---~gvQfHPEs--~~~m~-L~~~L~kl 222 (590)
...++-.+..++=| .+-|+-.+ +|+|||||- ..|++ |+||++.+
T Consensus 153 ~~~~~~v~~~~~YG~~f~AaV~k~N~~g~QFHPEKSg~~Gl~lL~NFl~~~ 203 (204)
T COG0118 153 PGNPETVVATTDYGEPFPAAVAKDNVFGTQFHPEKSGKAGLKLLKNFLEWI 203 (204)
T ss_pred CCCCceEEEeccCCCeeEEEEEeCCEEEEecCcccchHHHHHHHHHHHhhc
Confidence 54444433333333 44444443 999999995 77888 99998753
|
|
| >KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.4e-11 Score=127.11 Aligned_cols=164 Identities=12% Similarity=0.076 Sum_probs=113.5
Q ss_pred CCCeEEECCCCCCCCCchhhhhHHHHHHHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------------
Q 007779 96 AQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------------ 162 (590)
Q Consensus 96 ~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------------ 162 (590)
.|-+||||.||-.-- ++||...-..|++ + .+|+|| |-|+|.|+..|||.|.+- ..-.-|...
T Consensus 59 ~~rgiIiSGGP~SVy-a~dAP~~dp~if~-~--~vpvLGICYGmQ~i~~~~Gg~V~~~-~~RE~G~~eI~v~~~~~lF~~ 133 (552)
T KOG1622|consen 59 GPRGIIISGGPNSVY-AEDAPSFDPAIFE-L--GVPVLGICYGMQLINKLNGGTVVKG-MVREDGEDEIEVDDSVDLFSG 133 (552)
T ss_pred CceEEEEeCCCCccc-cCcCCCCChhHhc-c--CCcceeehhHHHHHHHHhCCccccc-cccCCCCceEEcCchhhhhhh
Confidence 568999999997632 2245443333132 2 699999 999999999999999986 444556543
Q ss_pred --CCceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhcC-CCCC-
Q 007779 163 --EGERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLAG-GHLG- 229 (590)
Q Consensus 163 --~~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~G-~~Lt- 229 (590)
..+...|+--||+.+..+|.+|+|.+ +.+..+-|+.|. ||+|||||. +.|+. ++||+-++..+ .+.|
T Consensus 134 ~~~~~~~~VlltHgdsl~~v~~g~kv~a~s~n~~va~i~~e~kkiyglqfhpEV~~t~~g~~ll~nFl~~vc~~~~n~tm 213 (552)
T KOG1622|consen 134 LHKTEFMTVLLTHGDSLSKVPEGFKVVAFSGNKPVAGILNELKKIYGLQFHPEVTLTPNGKELLKNFLFDVCGCSGNFTM 213 (552)
T ss_pred hcccceeeeeeccccchhhccccceeEEeecCcceeeehhhhhhhhcCCCCCcccccCchhHHHHHHHHHHcCCccCcch
Confidence 12244688899999999999999999 555558888887 999999997 67777 99999777655 3555
Q ss_pred ----HHHHHHHHHHhcCCcc-CCCCCCCCHHHHHHHHHHH
Q 007779 230 ----YEEVQGVLRDVLPLQV-DNKAPGVSESLLSAFLIGQ 264 (590)
Q Consensus 230 ----~eEa~~a~~~Il~~~~-~~~~g~~sd~qigAFL~al 264 (590)
.++.++.-+.+-+-.+ ---+|.++-.-.+++|...
T Consensus 214 enre~e~I~~i~k~vG~~~Vl~~vSGgvdStV~a~Ll~~a 253 (552)
T KOG1622|consen 214 ENREEECINEIRKWVGDYKVLVAVSGGVDSTVCAALLRRA 253 (552)
T ss_pred hhhhHHHHHHHHHHhcccceEEEecCCchHHHHHHHHHHh
Confidence 3444444443321000 0015777777777766544
|
|
| >KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=112.03 Aligned_cols=158 Identities=11% Similarity=0.020 Sum_probs=108.2
Q ss_pred ccCCCeEEECCCCCCCCCchh-hhhHHHHHHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCc--ccc------
Q 007779 94 LEAQAKVCTGPTQTRPLREDE-AFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEAT--QWS------ 162 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~-~g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG--~~s------ 162 (590)
++.|+|+|||.-+-+--.+.+ .-+..++ ++.+ .-++||+| |.|||+|+.+-|++|.|+++-|.-| .+.
T Consensus 57 l~ky~gfvIsGS~~dAf~d~dWI~KLcs~-~kkld~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~~lg~itivk~~~ 135 (245)
T KOG3179|consen 57 LEKYDGFVISGSKHDAFSDADWIKKLCSF-VKKLDFMKKKVLGICFGHQIIARAKGGKVGRAPKGPDLGLGSITIVKDAE 135 (245)
T ss_pred hhhhceEEEeCCcccccccchHHHHHHHH-HHHHHhhccceEEEeccHHHHHHhhCCccccCCCCCcccccceEEEEecc
Confidence 778999999966544322222 2344555 4443 23699999 9999999999999999994443323 221
Q ss_pred C-----C---ceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC---CCCcccCCCchhhHHHHHHHHhhcCCCCCH
Q 007779 163 E-----G---ERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS---IGPHYSGNDPREMRLVGALREVLAGGHLGY 230 (590)
Q Consensus 163 ~-----~---~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~---~gvQfHPEs~~~m~L~~~L~kl~~G~~Lt~ 230 (590)
. | +.+....-|+..|-.+|+..+++| +++.+++.+.-. +++|=|||=..+. +-+.+.++...+..++
T Consensus 136 ~~~~yFG~~~~~l~IikcHqDevle~PE~a~llasSe~ceve~fs~~~~~l~fQGHPEyn~ei-l~~ivdrv~~~k~~~e 214 (245)
T KOG3179|consen 136 KPEKYFGEIPKSLNIIKCHQDEVLELPEGAELLASSEKCEVEMFSIEDHLLCFQGHPEYNKEI-LFEIVDRVLGTKLVEE 214 (245)
T ss_pred cchhhcccchhhhhHHhhcccceecCCchhhhhccccccceEEEEecceEEEecCCchhhHHH-HHHHHHHHhcchhhHH
Confidence 1 3 257778899999989999999999 888888877655 9999999953332 4456666666565555
Q ss_pred HHHHHHHHHhcCCccCCCCCCCCHHHHHHHH
Q 007779 231 EEVQGVLRDVLPLQVDNKAPGVSESLLSAFL 261 (590)
Q Consensus 231 eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL 261 (590)
+-++.+-..+ ....++.|++--+
T Consensus 215 ef~~~ak~~~--------En~~~d~~~~~~i 237 (245)
T KOG3179|consen 215 EFAEKAKKTM--------ENPEPDRQLAVSI 237 (245)
T ss_pred HHHHHHHHhh--------hCCCccHHHHHHH
Confidence 5555555444 3555666765444
|
|
| >COG2071 Predicted glutamine amidotransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.5e-11 Score=118.76 Aligned_cols=113 Identities=17% Similarity=0.207 Sum_probs=83.1
Q ss_pred ccCCCeEEECCCCCC--C-------C------C-chhhhhHHHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCC-
Q 007779 94 LEAQAKVCTGPTQTR--P-------L------R-EDEAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANA- 154 (590)
Q Consensus 94 ~~~~~~ivlspGPg~--P-------~------~-~~~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~- 154 (590)
++.-|+|||+.| .+ | . + +.|+ -.+.+ ||. +..++|||| |=|.|.|.-+|||.+++=-+
T Consensus 58 l~~iDgliltGg-~nV~P~~YGee~~~~~~~~~p~RD~-~E~aL-i~~ALe~~iPILgICRG~QllNVa~GGtL~q~i~~ 134 (243)
T COG2071 58 LDLIDGLILTGG-SNVDPSLYGEEPSEKDGPYDPERDA-FELAL-IRAALERGIPILGICRGLQLLNVALGGTLYQDISE 134 (243)
T ss_pred HhhccEEEecCC-CcCCHHHcCCCCCcccCCCCccccH-HHHHH-HHHHHHcCCCEEEEccchHHHHHHhcCeeehhhhc
Confidence 455699999998 22 2 1 0 0122 23556 554 566899999 99999999999999975311
Q ss_pred CC---cCcccc------------C--------Cce-eEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC-----CCCc
Q 007779 155 FP---EATQWS------------E--------GER-RAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS-----IGPH 204 (590)
Q Consensus 155 ~~---~hG~~s------------~--------~~~-~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~-----~gvQ 204 (590)
.+ -|=+.. . |+. +.+..||--.++.|-++|+|+| ++||.|+|+.++ .|||
T Consensus 135 ~~~~~~H~~~~~~~~~~H~V~i~~~s~La~i~g~~~~~VNS~HhQaIk~La~~L~V~A~a~DG~VEAie~~~~~fvlGVQ 214 (243)
T COG2071 135 QPGHIDHRQPNPVHIESHEVHIEPGSKLAKILGESEFMVNSFHHQAIKKLAPGLVVEARAPDGTVEAVEVKNDAFVLGVQ 214 (243)
T ss_pred ccccccccCCCCcccceeEEEecCCccHHHhcCccceeecchHHHHHHHhCCCcEEEEECCCCcEEEEEecCCceEEEEe
Confidence 11 222111 1 334 8889999999999999999999 899999999998 8999
Q ss_pred ccCCC
Q 007779 205 YSGND 209 (590)
Q Consensus 205 fHPEs 209 (590)
||||-
T Consensus 215 WHPE~ 219 (243)
T COG2071 215 WHPEY 219 (243)
T ss_pred cChhh
Confidence 99996
|
|
| >PLN02327 CTP synthase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=129.31 Aligned_cols=124 Identities=10% Similarity=0.049 Sum_probs=83.4
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc---------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------- 162 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------- 162 (590)
+..+|+||+++|||++. ..|.. .. ++.+ ..++|+|| |||||.++..||..|... +.-.+....
T Consensus 360 L~~~DGIvvpGGfG~~~---~~G~i-~a-i~~are~~iP~LGIClGmQl~viefaRnvlG~-~dAnS~Efdp~t~~pvI~ 433 (557)
T PLN02327 360 LKGADGILVPGGFGDRG---VEGKI-LA-AKYARENKVPYLGICLGMQIAVIEFARSVLGL-KDANSTEFDPETPNPCVI 433 (557)
T ss_pred hccCCEEEeCCCCCCcc---cccHH-HH-HHHHHHcCCCEEEEcHHHHHHHHHHHHhhcCC-cCCCccccCCCCCCCEEE
Confidence 66789999999999987 45553 44 4544 35799999 999999999999987664 322222110
Q ss_pred --------C-------------------------Cce--eEEeccchhccc-----cC-CCcEEEEe-ecCC-cEEEEEc
Q 007779 163 --------E-------------------------GER--RAMNTFWPLLMR-----AL-PPDVIFIA-DPEG-SIMGGGG 199 (590)
Q Consensus 163 --------~-------------------------~~~--~~~~ryHsl~v~-----~~-p~~l~v~a-~~~g-~im~~~h 199 (590)
+ |+. +...+-|.|.|+ .+ -++|.+++ ++|| .|+++.+
T Consensus 434 ~m~e~~~~~~GGtMRLG~~~~~~~~~~S~l~~iYg~~~~VnerHrHRYeVN~q~v~~le~~gL~vsa~s~dg~~IEaiE~ 513 (557)
T PLN02327 434 FMPEGSKTHMGGTMRLGSRRTYFQTPDCKSAKLYGNVSFVDERHRHRYEVNPEMVPRLEKAGLSFVGKDETGRRMEIVEL 513 (557)
T ss_pred EehhcccccCCceEECCCcccccCCCCCHHHHHhCCccceeeeeccccccCHHHHHHHhhcCcEEEEEcCCCCEEEEEEe
Confidence 0 011 233445577773 34 36799999 7776 6899976
Q ss_pred C-----CCCcccCCC---chh-hH-HHHHHHHhh
Q 007779 200 S-----IGPHYSGND---PRE-MR-LVGALREVL 223 (590)
Q Consensus 200 ~-----~gvQfHPEs---~~~-m~-L~~~L~kl~ 223 (590)
+ .|||||||- +.. .. +..|++...
T Consensus 514 ~~~pffvGVQfHPE~~s~p~~~~pLF~~Fv~Aa~ 547 (557)
T PLN02327 514 PSHPFFVGVQFHPEFKSRPGKPSPLFLGLIAAAS 547 (557)
T ss_pred CCCCEEEEEEcCCCCCCCCCCchHHHHHHHHHHH
Confidence 6 499999996 222 22 666766553
|
|
| >PRK06186 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.3e-09 Score=105.11 Aligned_cols=123 Identities=12% Similarity=0.039 Sum_probs=75.2
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcC-------------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEA------------- 158 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~h------------- 158 (590)
|+.+|||++-||=|.=- -.|+ +.. ++.++ .++|+|| |||+|.+.-.|+-.+... +.-.+
T Consensus 51 l~~~dgilvpgGfg~rg---~~Gk-i~a-i~~Are~~iP~LGIClGmQ~avIe~arnv~g~-~dA~s~E~~~~~~~pvi~ 124 (229)
T PRK06186 51 LAGFDGIWCVPGSPYRN---DDGA-LTA-IRFARENGIPFLGTCGGFQHALLEYARNVLGW-ADAAHAETDPEGDRPVIA 124 (229)
T ss_pred HhhCCeeEeCCCCCccc---HhHH-HHH-HHHHHHcCCCeEeechhhHHHHHHHHhhhcCC-cCCCcCCCCCCCCCCEEE
Confidence 66789999999976533 3343 445 66654 3699999 999998666666555322 11111
Q ss_pred ---------cc-cc--C--------CceeEEecc-chhccc-----cC-CCcEEEEe-ecCCcEEEEEcC-----CCCcc
Q 007779 159 ---------TQ-WS--E--------GERRAMNTF-WPLLMR-----AL-PPDVIFIA-DPEGSIMGGGGS-----IGPHY 205 (590)
Q Consensus 159 ---------G~-~s--~--------~~~~~~~ry-Hsl~v~-----~~-p~~l~v~a-~~~g~im~~~h~-----~gvQf 205 (590)
|. +. . |+....-|+ |.+.|+ .+ .++|+++| ++||.|+++..+ .||||
T Consensus 125 ~~~~~~~~~~h~v~l~~~S~l~~iyg~~~i~erhrHryeVNs~h~q~i~~~GL~vsa~s~DG~iEaiE~~~hpf~lGVQw 204 (229)
T PRK06186 125 PLSCSLVEKTGDIRLRPGSLIARAYGTLEIEEGYHCRYGVNPEFVAALESGDLRVTGWDEDGDVRAVELPGHPFFVATLF 204 (229)
T ss_pred ECccccccCceEEEECCCCHHHHHhCCCeeeeeccccEEECHHHHHHHhcCCeEEEEEcCCCCEEEEEeCCCCcEEEEeC
Confidence 10 00 1 222222222 344453 12 56899999 899999999954 89999
Q ss_pred cCCC---chh-hH-HHHHHHHh
Q 007779 206 SGND---PRE-MR-LVGALREV 222 (590)
Q Consensus 206 HPEs---~~~-m~-L~~~L~kl 222 (590)
|||- +.. .. +..|++..
T Consensus 205 HPE~~s~~~~~~~LF~~Fv~aa 226 (229)
T PRK06186 205 QPERAALAGRPPPLVRAFLRAA 226 (229)
T ss_pred CCCccCCCCCCCHHHHHHHHHH
Confidence 9994 211 22 66666554
|
|
| >TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I | Back alignment and domain information |
|---|
Probab=98.83 E-value=1e-08 Score=103.26 Aligned_cols=144 Identities=14% Similarity=0.063 Sum_probs=87.8
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-----hhhhhHHHHHHHH-hcCCCCcc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-----DEAFKVLDTILRS-AKGDLKDE 133 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-----~~~g~~~~~~i~~-~~~~~Pil 133 (590)
..|++.|.++.++..+... ++.+|+|||+.|+..-+.. .+.....+. ++. ....+|++
T Consensus 19 ~al~~~G~~~~~i~~~~~~---------------l~~~d~lilpGG~~~~d~~~~~~~~~~~~~~~~-l~~~~~~g~pvl 82 (227)
T TIGR01737 19 YALRLLGVDAEIVWYEDGS---------------LPDYDGVVLPGGFSYGDYLRAGAIAAASPIMQE-VREFAEKGVPVL 82 (227)
T ss_pred HHHHHCCCeEEEEecCCCC---------------CCCCCEEEECCCCcccccccccchhcchHHHHH-HHHHHHcCCEEE
Confidence 5677789988877543211 3456899999997432100 011224566 544 44569999
Q ss_pred c-ccchHHHHhH--hCceeeccCCCCcCcc-c-c---------------CCc--eeEEeccch-hccc-----cCCCcEE
Q 007779 134 E-EVSKAQLGAF--FSAMTIRANAFPEATQ-W-S---------------EGE--RRAMNTFWP-LLMR-----ALPPDVI 185 (590)
Q Consensus 134 G-CLGhQ~i~~~--~G~~v~~~~~~~~hG~-~-s---------------~~~--~~~~~ryHs-l~v~-----~~p~~l~ 185 (590)
| |.|+|.|+.+ ++|.+.+- ...+++. | . .|. .++++..++ +.++ .|.....
T Consensus 83 gIC~G~QlLa~~GlL~G~l~~n-~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~~~~pi~H~eG~y~~~~~~l~~l~~~~~ 161 (227)
T TIGR01737 83 GICNGFQILVEAGLLPGALLPN-DSLRFICRWVYLRVENADTIFTKNYKKGEVIRIPIAHGEGRYYADDETLARLESNDQ 161 (227)
T ss_pred EECHHHHHHHHcCCCCCceeec-CCCceEEEeEEEEECCCCChhhccCCCCCEEEEEeEcCCcCeEcCHHHHHHHHHCCc
Confidence 9 9999999996 88888876 5555543 1 1 133 233343333 2332 3433323
Q ss_pred EE--e-e----------cCC---cEEEEEcC----CCCcccCCC--------chhhH-HHHHHH
Q 007779 186 FI--A-D----------PEG---SIMGGGGS----IGPHYSGND--------PREMR-LVGALR 220 (590)
Q Consensus 186 v~--a-~----------~~g---~im~~~h~----~gvQfHPEs--------~~~m~-L~~~L~ 220 (590)
|. . + ++| .|||+.|+ +|+|||||+ +.|+. ++++++
T Consensus 162 i~~~y~d~~g~~~~~~npngs~~~i~~i~~~~~~~~g~~~HpE~~~~~~~~~~~g~~~~~~~~~ 225 (227)
T TIGR01737 162 VVFRYCDEDGDVAEEANPNGSVGNIAGIVNERGNVLGMMPHPERASEKLLGGDDGLKLFESLVE 225 (227)
T ss_pred EEEEEECCCCCCCCCCCCCCCHHHHcccCCCCCCEEEEecCchhhcccccCCcccHHHHHHHHh
Confidence 22 2 3 344 59999998 999999998 35665 666653
|
In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain. This model describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea. |
| >PRK05368 homoserine O-succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=98.26 Aligned_cols=183 Identities=9% Similarity=-0.035 Sum_probs=106.3
Q ss_pred ccccccccceeEeecccc------HHHHHHhCC-----ceEEEeCCCCCc-----cccccCCCCCcccc-ccCCCeEEEC
Q 007779 41 GNRLIGRRIRLTVKADLD------SALIDQLGL-----KESDIINPAISS-----SYRSSKLPKPNQTL-LEAQAKVCTG 103 (590)
Q Consensus 41 ~~~~~~~~~~~~~~~~~d------~~~~~~lg~-----~~~v~rnd~~~~-----~~~~~~~~~~~~~~-~~~~~~ivls 103 (590)
.+|-| |+++|.++...= -|+++.|+. +++.++-+.-.. +..+. .-++...+ -+.+||+||.
T Consensus 29 ~~qdi-rpl~i~ilNlMp~k~~TE~q~~rll~~~~~qv~v~~~~~~~h~~~~~~~~hl~~-~y~~~~~i~~~~~DG~IIT 106 (302)
T PRK05368 29 AHQDI-RPLKILILNLMPKKIETETQFLRLLGNTPLQVDIHLLRIDSHESKNTPAEHLEN-FYCTFEDIKDEKFDGLIIT 106 (302)
T ss_pred ccccC-CCccEEEEeCCCCCchHHHHHHHHhcCCCceEEEEEEecCCcCCCCCCHHHHHH-hccCHHHhccCCCCEEEEc
Confidence 44555 446887776542 288888874 344444433111 00000 00111011 2368999999
Q ss_pred CCCCC--CCCchh-hhhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----------CC--c
Q 007779 104 PTQTR--PLREDE-AFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----------EG--E 165 (590)
Q Consensus 104 pGPg~--P~~~~~-~g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----------~~--~ 165 (590)
..|-. +-+..+ ...+.++ ++... ..+|+|| |.|||+++.++||......+.-..|... .| +
T Consensus 107 GAp~e~~~fedv~YW~El~~i-~~w~~~~~~s~LgICwGaQa~a~algGi~k~~~~~K~~Gv~~~~~~~~~~pL~~g~~d 185 (302)
T PRK05368 107 GAPVEQLPFEDVDYWDELKEI-LDWAKTHVTSTLFICWAAQAALYHLYGIPKYTLPEKLSGVFEHRVLDPHHPLLRGFDD 185 (302)
T ss_pred CCCCCCccCCCCchHHHHHHH-HHHHHHcCCCEEEEcHHHHHHHHHcCCCccCCCCCceeEEEEEEEcCCCChhhcCCCC
Confidence 88866 432222 1123333 44332 2599999 9999999999999622110111233211 11 2
Q ss_pred eeEEeccchhccc----cCCCcEEEEe-ecCCcEEEEEc---C-CCCcccCCCchhhHHHHHHHHhhcCC
Q 007779 166 RRAMNTFWPLLMR----ALPPDVIFIA-DPEGSIMGGGG---S-IGPHYSGNDPREMRLVGALREVLAGG 226 (590)
Q Consensus 166 ~~~~~ryHsl~v~----~~p~~l~v~a-~~~g~im~~~h---~-~gvQfHPEs~~~m~L~~~L~kl~~G~ 226 (590)
.|.+-..|-..|+ ..|++++|+| +++.-+.+++- + ++||||||=....-..++.|.+.+|.
T Consensus 186 ~F~~phSr~~~V~~~~i~~~~~l~vLA~S~~~gv~~~~~~~~r~~~vQgHPEYd~~tL~~EY~RD~~~~~ 255 (302)
T PRK05368 186 SFLVPHSRYTEVREEDIRAATGLEILAESEEAGVYLFASKDKREVFVTGHPEYDADTLAQEYFRDLGAGL 255 (302)
T ss_pred ccccceeehhhccHHHhccCCCCEEEecCCCCCeEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 4666545544552 3688999999 66666777754 3 99999999766666778888888875
|
|
| >PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.5e-07 Score=92.42 Aligned_cols=67 Identities=15% Similarity=0.102 Sum_probs=43.8
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhh---hHHHHHHHHh-cCCCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAF---KVLDTILRSA-KGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g---~~~~~~i~~~-~~~~PilG- 134 (590)
+.|+.+|.++.++++.+ + ++..|+|||.. |-+....... ...+. |+++ ...+|+||
T Consensus 18 ~aL~~lG~ev~~v~~~~----~------------L~~~DgLILPG--Gfs~~~~~L~~~~gl~~~-I~~~v~~g~PvLGi 78 (248)
T PLN02832 18 AALRRLGVEAVEVRKPE----Q------------LEGVSGLIIPG--GESTTMAKLAERHNLFPA-LREFVKSGKPVWGT 78 (248)
T ss_pred HHHHHCCCcEEEeCCHH----H------------hccCCEEEeCC--CHHHHHHHHHhhcchHHH-HHHHHHcCCCEEEE
Confidence 77888999998887742 1 33458888855 3343111111 24555 5554 35799999
Q ss_pred ccchHHHHhHh
Q 007779 135 EVSKAQLGAFF 145 (590)
Q Consensus 135 CLGhQ~i~~~~ 145 (590)
|+|+|.|++.-
T Consensus 79 C~GmqlLa~~~ 89 (248)
T PLN02832 79 CAGLIFLAERA 89 (248)
T ss_pred ChhHHHHHHHh
Confidence 99999998864
|
|
| >PRK13526 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.7e-07 Score=87.36 Aligned_cols=141 Identities=6% Similarity=0.015 Sum_probs=92.5
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCC--CCchhhhhHHHHHHHHhcCCCCccc-cc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRP--LREDEAFKVLDTILRSAKGDLKDEE-EV 136 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P--~~~~~~g~~~~~~i~~~~~~~PilG-CL 136 (590)
+.|+.+|.++.++|+.+ + ++.+|+|||-.|+++. ...++. .+.+. |+++..+.|++| |+
T Consensus 19 ~al~~lG~~v~~v~~~~----~------------l~~~D~LILPGG~~t~~~~ll~~~-~l~~~-Ik~~~~~kpilGICa 80 (179)
T PRK13526 19 DMFKSLGVEVKLVKFNN----D------------FDSIDRLVIPGGESTTLLNLLNKH-QIFDK-LYNFCSSKPVFGTCA 80 (179)
T ss_pred HHHHHcCCcEEEECCHH----H------------HhCCCEEEECCChHHHHHHHhhhc-CcHHH-HHHHHcCCcEEEEcH
Confidence 67888999988887642 1 3456889996676654 212222 36777 777654679999 99
Q ss_pred chHHHHh---HhC---ceeeccCCCCcCc-ccc-----CCceeEEeccchhccccCCCcEEEEeecCCcEEEEEcC--CC
Q 007779 137 SKAQLGA---FFS---AMTIRANAFPEAT-QWS-----EGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGS--IG 202 (590)
Q Consensus 137 GhQ~i~~---~~G---~~v~~~~~~~~hG-~~s-----~~~~~~~~ryHsl~v~~~p~~l~v~a~~~g~im~~~h~--~g 202 (590)
|.|.|+. -+| ++|.|. .+...= .+. .+.+|.+.-.---.|.++.++++|+|+-+|.+.++|.. .+
T Consensus 81 G~qlL~~~s~~Lg~idg~V~Rn-~~Grq~~sf~~~~~~~~~~~~~vFiRAP~i~~~~~~v~vla~~~~~~v~v~q~~~l~ 159 (179)
T PRK13526 81 GSIILSKGEGYLNLLDLEVQRN-AYGRQVDSFVADISFNDKNITGVFIRAPKFIVVGNQVDILSKYQNSPVLLRQANILV 159 (179)
T ss_pred HHHHHHccCCCCCCccEEEEEc-CCCCccceeeeecCcCCceEEEEEEcCceEeEcCCCcEEEEEECCEEEEEEECCEEE
Confidence 9999998 455 677776 444210 111 12233333222223346778899999656788888887 99
Q ss_pred CcccCCCchhhHHHHHH
Q 007779 203 PHYSGNDPREMRLVGAL 219 (590)
Q Consensus 203 vQfHPEs~~~m~L~~~L 219 (590)
.-||||=....++.+|.
T Consensus 160 ~~FHPElt~d~r~h~~f 176 (179)
T PRK13526 160 SSFHPELTQDPTVHEYF 176 (179)
T ss_pred EEeCCccCCCchHHHHH
Confidence 99999987666665553
|
|
| >PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.8e-06 Score=81.37 Aligned_cols=133 Identities=12% Similarity=0.024 Sum_probs=79.2
Q ss_pred HHHH-HhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC-----chhhhhHHHHHHHH-hcCCCCc
Q 007779 60 ALID-QLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR-----EDEAFKVLDTILRS-AKGDLKD 132 (590)
Q Consensus 60 ~~~~-~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~-----~~~~g~~~~~~i~~-~~~~~Pi 132 (590)
..|+ ..|.++..+..++.+ ++.+|+|||+.|++.-+. ........+. +++ +....|+
T Consensus 19 ~a~~~~~G~~~~~v~~~~~~---------------l~~~D~lvipGG~~~~d~l~~~~~~~~~~~~~~-l~~~~~~g~~i 82 (219)
T PRK03619 19 RALRDLLGAEPEYVWHKETD---------------LDGVDAVVLPGGFSYGDYLRCGAIAAFSPIMKA-VKEFAEKGKPV 82 (219)
T ss_pred HHHHhcCCCeEEEEecCcCC---------------CCCCCEEEECCCCchhhhhccchhhhchHHHHH-HHHHHHCCCEE
Confidence 4566 788887766443211 446689999988753110 0111335566 544 4456999
Q ss_pred cc-ccchHHHHhH--hCceeeccCCCCcCc-ccc----------------CCceeEEeccc---hhcc-----ccCCC-c
Q 007779 133 EE-EVSKAQLGAF--FSAMTIRANAFPEAT-QWS----------------EGERRAMNTFW---PLLM-----RALPP-D 183 (590)
Q Consensus 133 lG-CLGhQ~i~~~--~G~~v~~~~~~~~hG-~~s----------------~~~~~~~~ryH---sl~v-----~~~p~-~ 183 (590)
+| |.|+|.|+++ +++++.+- +..++. +|. .|..+.+.--| -|.+ +.+.+ .
T Consensus 83 lgIC~G~qlLa~~GLL~g~l~~n-~~~~~~~~~v~v~i~~~~~~~~~~~~~g~~~~~~~aH~~~r~~~~~~~~~~l~~~~ 161 (219)
T PRK03619 83 LGICNGFQILTEAGLLPGALTRN-ASLKFICRDVHLRVENNDTPFTSGYEKGEVIRIPIAHGEGNYYADEETLKRLEGNG 161 (219)
T ss_pred EEECHHHHHHHHcCCCCCeEEEc-CCCcEEEEEEEEEECCCCChhhcCCCCCCEEEEEEEcCcccEEECHHHHHHHHhCC
Confidence 99 9999999997 88888775 555442 111 23344331122 2222 24433 3
Q ss_pred EEEEe-e---cCC---cEEEEEcC----CCCcccCCC
Q 007779 184 VIFIA-D---PEG---SIMGGGGS----IGPHYSGND 209 (590)
Q Consensus 184 l~v~a-~---~~g---~im~~~h~----~gvQfHPEs 209 (590)
+.+.. + ++| .|.++... +|+|||||.
T Consensus 162 ~~~~~~~~~npngs~~~ia~i~~~~~~~~g~~~HPE~ 198 (219)
T PRK03619 162 QVVFRYCDENPNGSVNDIAGIVNEKGNVLGMMPHPER 198 (219)
T ss_pred cEEEEEcCCCCCCCHHHhcccCCCCCCEEEEeCCCCc
Confidence 44443 3 566 47888763 999999997
|
|
| >COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00012 Score=79.94 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=74.0
Q ss_pred CCeEEECCCCCCCCCchhhhhHHHHHHHHhcC-CCCccc-ccchHHHHhHhCceeeccCCCCcC------ccc-------
Q 007779 97 QAKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEA------TQW------- 161 (590)
Q Consensus 97 ~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~-~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~h------G~~------- 161 (590)
.|||++-+|=|.=- -.|+. .. ++.++. ++|+|| |||+|...-.|.-.|..+ +.-.. ++.
T Consensus 344 ~dgIlVPGGFG~RG---~eGkI-~A-i~yAREn~iP~lGIClGmQ~aviE~ARnv~Gl-~~AnS~Efdp~t~~pVv~l~~ 417 (533)
T COG0504 344 VDGILVPGGFGYRG---VEGKI-AA-IRYARENNIPFLGICLGMQLAVIEFARNVLGL-EGANSTEFDPDTKYPVVDLMP 417 (533)
T ss_pred CCEEEeCCCCCcCc---hHHHH-HH-HHHHHhcCCCEEEEchhHHHHHHHHHHHhcCC-ccCcccccCCCCCCceEEecc
Confidence 69999999988654 34543 34 565554 599999 999999988886555443 11100 100
Q ss_pred ---c------------------CC---------ceeEEeccchhccc-----cC-CCcEEEEe-ecCC-cEEEEEcC---
Q 007779 162 ---S------------------EG---------ERRAMNTFWPLLMR-----AL-PPDVIFIA-DPEG-SIMGGGGS--- 200 (590)
Q Consensus 162 ---s------------------~~---------~~~~~~ryHsl~v~-----~~-p~~l~v~a-~~~g-~im~~~h~--- 200 (590)
. .| +...--.-|-|.|+ .+ -..|++.+ ++|| .++.+...
T Consensus 418 eq~~~~~lGGTmRLG~y~~~l~~gT~a~~lY~~~~v~ERHRHRYEvN~~y~~~le~~Gl~~sg~s~d~~lvEivE~~~hp 497 (533)
T COG0504 418 EQKDVVDLGGTMRLGAYPCRLKPGTLAAKLYGKDEIYERHRHRYEVNNDYRDQLEKAGLVFSGTSPDGGLVEIVELPDHP 497 (533)
T ss_pred ccccCCcCCceeeccceeeecCCCcHHHHHhCCCeeeeeccchhhcCHHHHHHHHhCCeEEEEEcCCCCeEEEEEcCCCc
Confidence 0 01 02222344666663 23 23699999 7776 46666655
Q ss_pred --CCCcccCCC---ch-hhH-HHHHHHHhh
Q 007779 201 --IGPHYSGND---PR-EMR-LVGALREVL 223 (590)
Q Consensus 201 --~gvQfHPEs---~~-~m~-L~~~L~kl~ 223 (590)
.|+|||||= +. ... +..|++...
T Consensus 498 fFv~~QfHPEf~SrP~~phPlf~~fv~Aa~ 527 (533)
T COG0504 498 FFVATQFHPEFKSRPLRPHPLFVGFVKAAL 527 (533)
T ss_pred eEEEEcccccccCCCCCCCccHHHHHHHHH
Confidence 899999993 22 222 667776554
|
|
| >KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00024 Score=74.21 Aligned_cols=159 Identities=16% Similarity=0.133 Sum_probs=90.9
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCC--CCC--chhhhhHHHHHHHHh-cC
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTR--PLR--EDEAFKVLDTILRSA-KG 128 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~--P~~--~~~~g~~~~~~i~~~-~~ 128 (590)
|+-| +-++.||..+..++|+.- +. .-|++ |=||=|+ |.. .-..| ..+- ++++ ..
T Consensus 13 n~~si~nal~hlg~~i~~v~~P~D-I~---------------~a~rL-IfPGVGnfg~~~D~L~~~G-f~ep-lr~Yies 73 (541)
T KOG0623|consen 13 NVRSIRNALRHLGFSIKDVQTPGD-IL---------------NADRL-IFPGVGNFGPAMDVLNRTG-FAEP-LRKYIES 73 (541)
T ss_pred cHHHHHHHHHhcCceeeeccCchh-hc---------------cCceE-eecCcccchHHHHHHhhhh-hHHH-HHHHHhc
Confidence 3444 889999999999998731 11 11344 4577776 321 01122 2344 4443 44
Q ss_pred CCCccc-ccchHHHHhHhCceeeccC-------------------CCCcCcccc-----CCc------eeEEeccchhcc
Q 007779 129 DLKDEE-EVSKAQLGAFFSAMTIRAN-------------------AFPEATQWS-----EGE------RRAMNTFWPLLM 177 (590)
Q Consensus 129 ~~PilG-CLGhQ~i~~~~G~~v~~~~-------------------~~~~hG~~s-----~~~------~~~~~ryHsl~v 177 (590)
..|++| |+|.|+| |-+.+..-+ ..|+-|-+| +.+ ...+---||+..
T Consensus 74 gkPfmgicvGlQaL---F~gSvE~p~skGLgvipg~v~RFD~s~k~VPhIGWNsc~v~sd~effg~~p~~~~YFVHSyl~ 150 (541)
T KOG0623|consen 74 GKPFMGICVGLQAL---FDGSVENPPSKGLGVIPGIVGRFDASAKIVPHIGWNSCQVGSDSEFFGDVPNRHVYFVHSYLN 150 (541)
T ss_pred CCCeEeehhhHHHH---hcccccCCCcCcccccccceecccCCCCcCCcccccccccCCcccccccCCCceEEEEeeecc
Confidence 699999 9999997 444443220 112223222 111 122233488866
Q ss_pred c----cCCC-cEEEEeecCC---cEEEEEcC--CCCcccCCC--chhhH-HHHHHHHhhcCCCCCHHHHHHHHH
Q 007779 178 R----ALPP-DVIFIADPEG---SIMGGGGS--IGPHYSGND--PREMR-LVGALREVLAGGHLGYEEVQGVLR 238 (590)
Q Consensus 178 ~----~~p~-~l~v~a~~~g---~im~~~h~--~gvQfHPEs--~~~m~-L~~~L~kl~~G~~Lt~eEa~~a~~ 238 (590)
. ++++ ++++.-+.-| -|-+++.. +.+|||||- +.|.+ |++||. ..-+++...|++.+|+
T Consensus 151 ~ek~~~len~~wkiat~kYG~E~Fi~ai~knN~~AtQFHPEKSG~aGL~vl~~FL~--~~~ppips~e~~kl~e 222 (541)
T KOG0623|consen 151 REKPKSLENKDWKIATCKYGSESFISAIRKNNVHATQFHPEKSGEAGLSVLRRFLH--QQSPPIPSAETQKLME 222 (541)
T ss_pred cccccCCCCCCceEeeeccCcHHHHHHHhcCceeeEecccccccchhHHHHHHHHh--ccCCCCCchhhhhhhh
Confidence 3 4544 4665544333 36666655 999999996 77887 888887 3345665556655543
|
|
| >PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0052 Score=60.14 Aligned_cols=144 Identities=13% Similarity=0.177 Sum_probs=78.7
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCC-C-chhhhhHHHHHHHHh-cC-CCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPL-R-EDEAFKVLDTILRSA-KG-DLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~-~-~~~~g~~~~~~i~~~-~~-~~PilG- 134 (590)
++|+++|.+...+|..+ + ++.-|++||-.|=.+=- . ..+. .+.+- |+++ .. ++|++|
T Consensus 13 ~~l~~lg~~~~~Vr~~~----d------------L~~~dgLIiPGGESTti~~ll~~~-gL~~~-l~~~~~~g~~Pv~GT 74 (188)
T PF01174_consen 13 RMLERLGAEVVEVRTPE----D------------LEGLDGLIIPGGESTTIGKLLRRY-GLFEP-LREFIRSGSKPVWGT 74 (188)
T ss_dssp HHHHHTTSEEEEE-SGG----G------------GTT-SEEEE-SS-HHHHHHHHHHT-THHHH-HHHHHHTT--EEEEE
T ss_pred HHHHHcCCCeEEeCCHH----H------------HccCCEEEECCCcHHHHHHHHHHc-CCHHH-HHHHHHcCCCceeeh
Confidence 67999999888777642 1 44558999965522100 0 0011 23444 4443 33 499999
Q ss_pred ccchHHHHh--------HhCceeeccCCCCcCccc-c--------C--CceeEEeccchhccccC--CCcEEEEeecCCc
Q 007779 135 EVSKAQLGA--------FFSAMTIRANAFPEATQW-S--------E--GERRAMNTFWPLLMRAL--PPDVIFIADPEGS 193 (590)
Q Consensus 135 CLGhQ~i~~--------~~G~~v~~~~~~~~hG~~-s--------~--~~~~~~~ryHsl~v~~~--p~~l~v~a~~~g~ 193 (590)
|=|.-.|+. .+|+.=+.. .+=..|.. . . +++|.+.-..--.|.++ |+..+|.+..+|.
T Consensus 75 CAGlIlLa~~v~~~~q~~Lg~ldi~V-~RNafGrQ~~SFe~~l~i~~~~~~~~avFIRAP~I~~v~~~~~v~vla~~~g~ 153 (188)
T PF01174_consen 75 CAGLILLAKEVEGQGQPLLGLLDITV-RRNAFGRQLDSFEADLDIPGLGEPFPAVFIRAPVIEEVGSPEGVEVLAELDGK 153 (188)
T ss_dssp THHHHHHEEEECSSCCTSS--EEEEE-ETTTTCSSSCEEEEEEEETTTESEEEEEESS--EEEEE--TTTEEEEEEETTE
T ss_pred hHHHHHhhhhhhhcccccccceeEEE-EccccccchhcEEEEEEeecCCCcEEEEEcCCcEEEEeecccccccccccccc
Confidence 999999987 344433322 11122322 1 1 23555554444444444 3679999965678
Q ss_pred EEEEEcC--CCCcccCCCchh-hHHHH-HHHHh
Q 007779 194 IMGGGGS--IGPHYSGNDPRE-MRLVG-ALREV 222 (590)
Q Consensus 194 im~~~h~--~gvQfHPEs~~~-m~L~~-~L~kl 222 (590)
|.|++.. .+.-||||=... .++.+ ||+++
T Consensus 154 iVav~qgn~latsFHPELT~D~~r~H~yFl~~v 186 (188)
T PF01174_consen 154 IVAVRQGNILATSFHPELTDDDTRIHEYFLEMV 186 (188)
T ss_dssp EEEEEETTEEEESS-GGGSSTHCHHHHHHHHHH
T ss_pred eEEEEecCEEEEEeCCcccCchhHHHHHHHHHh
Confidence 8888866 999999997554 66444 44443
|
The regulation of cellular growth and proliferation in response to environmental cues is critical for development and the maintenance of viability in all organisms. In unicellular organisms, such as the budding yeast Saccharomyces cerevisiae (Baker's yeast), growth and proliferation are regulated by nutrient availability. Pyridoxal 5'-phosphate (PLP) is synthesized by the PdxA/PdxJ pathway in some species (mostly within the gamma subdivision of the proteobacteria) and by the Pdx1/Pdx2 pathway in most other organisms. This family describes PdxT, the glutaminase subunit of the PLP synthase. It is involved in the hydrolysis of glutamine to glutamate and ammonia, channeling an ammonia molecule to PdxS. ; PDB: 2ISS_D 4ADS_J 2ABW_B 2YWD_A 2NV0_A 2NV2_N 1R9G_A 1Q7R_A 2YWJ_A. |
| >cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0028 Score=64.44 Aligned_cols=82 Identities=10% Similarity=-0.016 Sum_probs=54.1
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh-----hhh-HHHHHHHHh-cCCCCc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE-----AFK-VLDTILRSA-KGDLKD 132 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~-----~g~-~~~~~i~~~-~~~~Pi 132 (590)
..|++.|.++.++..+.. ... . ..++.+|+|||..|+..-+.... ... ..++ ++.+ ...+|+
T Consensus 17 ~al~~aG~~v~~v~~~~~-~~~------~---~~l~~~d~liipGG~~~~d~l~~~~~~~~~~~~~~~-l~~~~~~g~pv 85 (238)
T cd01740 17 YAFELAGFEAEDVWHNDL-LAG------R---KDLDDYDGVVLPGGFSYGDYLRAGAIAAASPLLMEE-VKEFAERGGLV 85 (238)
T ss_pred HHHHHcCCCEEEEeccCC-ccc------c---CCHhhCCEEEECCCCCcccccccccccccChhHHHH-HHHHHhCCCeE
Confidence 456778999888876542 111 0 01557899999999864331110 111 5566 6654 456999
Q ss_pred cc-ccchHHHHhH--hCceeecc
Q 007779 133 EE-EVSKAQLGAF--FSAMTIRA 152 (590)
Q Consensus 133 lG-CLGhQ~i~~~--~G~~v~~~ 152 (590)
+| |.|+|.|+++ .++++.+-
T Consensus 86 lGIC~G~QlL~~~gll~g~~~~~ 108 (238)
T cd01740 86 LGICNGFQILVELGLLPGALIRN 108 (238)
T ss_pred EEECcHHHHHHHcCCCccccccC
Confidence 99 9999999998 88877654
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site |
| >KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0046 Score=66.94 Aligned_cols=49 Identities=8% Similarity=-0.118 Sum_probs=33.7
Q ss_pred CCeEEECCCCCCCCCchhhhhHHHHHHHHhcC-CCCccc-ccchHHHHhHhCceee
Q 007779 97 QAKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVSKAQLGAFFSAMTI 150 (590)
Q Consensus 97 ~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~-~~PilG-CLGhQ~i~~~~G~~v~ 150 (590)
-|||++-.|=|.=- -.|.++ . ++.++. ++|.|| |||+|.-.-.|.-.|.
T Consensus 364 adGilvPGGFG~RG---veG~i~-A-ak~ARen~iP~LGiCLGmQ~AvIEfaRnvL 414 (585)
T KOG2387|consen 364 ADGILVPGGFGDRG---VEGKIL-A-AKWARENKIPFLGICLGMQLAVIEFARNVL 414 (585)
T ss_pred CCeEEeCCcccccc---hhHHHH-H-HHHHHhcCCCeEeeehhhhHHHHHHHHHhh
Confidence 58999988777654 334433 3 444443 599999 9999998877754443
|
|
| >COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.017 Score=56.38 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=86.8
Q ss_pred HHHHHhC-CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC--chhhhhHHHHHHHHhcCCCCccc-c
Q 007779 60 ALIDQLG-LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR--EDEAFKVLDTILRSAKGDLKDEE-E 135 (590)
Q Consensus 60 ~~~~~lg-~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~--~~~~g~~~~~~i~~~~~~~PilG-C 135 (590)
+.+++++ .++..+|+.+ + ++.-|++||-.|=.+--. ..+.|. .+-|.+.....+|++| |
T Consensus 17 ~~l~~~~~~e~~~Vk~~~----d------------L~~~d~LIiPGGESTTi~rL~~~~gl-~e~l~~~~~~G~Pv~GTC 79 (194)
T COG0311 17 EALEKAGGAEVVEVKRPE----D------------LEGVDGLIIPGGESTTIGRLLKRYGL-LEPLREFIADGLPVFGTC 79 (194)
T ss_pred HHHHhhcCCceEEEcCHH----H------------hccCcEEEecCccHHHHHHHHHHcCc-HHHHHHHHHcCCceEEec
Confidence 5678884 8888777642 1 445588999776433100 112233 3342455566799999 9
Q ss_pred cchHHHHh-HhCc-e----------eeccCCCCcCcccc---C--------Cce--eEEeccchhccccCCCcEEEEeec
Q 007779 136 VSKAQLGA-FFSA-M----------TIRANAFPEATQWS---E--------GER--RAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 136 LGhQ~i~~-~~G~-~----------v~~~~~~~~hG~~s---~--------~~~--~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
=|.-.|+. .-++ . |.| |.| |... + +.+ +.++---.-+|..+-+..++.|+-
T Consensus 80 AGlIlLakei~~~~~~~~Lg~mdi~V~R-NAf---GRQ~dSFe~~~di~~~~~~~~~~avFIRAP~I~~vg~~V~vLa~l 155 (194)
T COG0311 80 AGLILLAKEILDGPEQPLLGLLDVTVRR-NAF---GRQVDSFETELDIEGFGLPFPFPAVFIRAPVIEEVGDGVEVLATL 155 (194)
T ss_pred hhhhhhhhhhcCCCCCcccceEEEEEEc-ccc---ccccccceeeEEeecccCCCcceEEEEEcceeehhcCcceEeeee
Confidence 99999984 3321 1 111 122 3221 1 111 322322333344444479999966
Q ss_pred CCcEEEEEcC--CCCcccCCCchhhHHHHHHHHhhcC
Q 007779 191 EGSIMGGGGS--IGPHYSGNDPREMRLVGALREVLAG 225 (590)
Q Consensus 191 ~g~im~~~h~--~gvQfHPEs~~~m~L~~~L~kl~~G 225 (590)
|+.|.|++.. .+.-||||=....++.+|..++..+
T Consensus 156 ~~~iVav~qgn~LatsFHPELT~D~r~Heyf~~~v~~ 192 (194)
T COG0311 156 DGRIVAVKQGNILATSFHPELTDDTRLHEYFLDMVLG 192 (194)
T ss_pred CCEEEEEEeCCEEEEecCccccCCccHHHHHHHHhhc
Confidence 7788888877 9999999987766877777666543
|
|
| >cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0064 Score=59.85 Aligned_cols=75 Identities=9% Similarity=0.039 Sum_probs=48.5
Q ss_pred ccccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh--hhhHHHHHHHH-hcCC
Q 007779 55 ADLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE--AFKVLDTILRS-AKGD 129 (590)
Q Consensus 55 ~~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~--~g~~~~~~i~~-~~~~ 129 (590)
.|+.+ +.+++.|+++.+++.++= ++.+|+|||..|+-....... .....+. |++ ....
T Consensus 10 gN~~~l~~~~~~~G~~~~~~~~~~~----------------~~~~d~lilpGg~~~~~~~~~~~~~~~~~~-i~~~~~~g 72 (194)
T cd01750 10 SNFTDLDPLAREPGVDVRYVEVPEG----------------LGDADLIILPGSKDTIQDLAWLRKRGLAEA-IKNYARAG 72 (194)
T ss_pred cCHHHHHHHHhcCCceEEEEeCCCC----------------CCCCCEEEECCCcchHHHHHHHHHcCHHHH-HHHHHHCC
Confidence 45555 667788999998876431 224588999766633221000 1124555 444 4457
Q ss_pred CCccc-ccchHHHHhHhC
Q 007779 130 LKDEE-EVSKAQLGAFFS 146 (590)
Q Consensus 130 ~PilG-CLGhQ~i~~~~G 146 (590)
+|++| |+|.|.|++.+.
T Consensus 73 ~pvlgiC~G~qlL~~~~~ 90 (194)
T cd01750 73 GPVLGICGGYQMLGKYIV 90 (194)
T ss_pred CcEEEECHHHHHhhhhcc
Confidence 99999 999999999984
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ. |
| >PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.013 Score=60.70 Aligned_cols=74 Identities=5% Similarity=-0.027 Sum_probs=45.7
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCC--CCCCch-----hh-hhHHHHHHHH-hcCCC
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQT--RPLRED-----EA-FKVLDTILRS-AKGDL 130 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg--~P~~~~-----~~-g~~~~~~i~~-~~~~~ 130 (590)
..|++.|.++.++.-...... . ..++.+|+|||..|.+ ++.... .. ..+.+. |++ +...+
T Consensus 22 ~Al~~aG~~v~~v~~~~~~~~-------~---~~l~~~DgLvipGGfs~gD~l~~g~~~~~~l~~~l~~~-Ik~f~~~gk 90 (261)
T PRK01175 22 KAFRRLGVEPEYVHINDLAAE-------R---KSVSDYDCLVIPGGFSAGDYIRAGAIFAARLKAVLRKD-IEEFIDEGY 90 (261)
T ss_pred HHHHHCCCcEEEEeecccccc-------c---cchhhCCEEEECCCCCcccccccchhhHHHHHHHHHHH-HHHHHHCCC
Confidence 667788998887754321110 0 1156789999988864 332111 00 113355 555 44569
Q ss_pred Cccc-ccchHHHHhH
Q 007779 131 KDEE-EVSKAQLGAF 144 (590)
Q Consensus 131 PilG-CLGhQ~i~~~ 144 (590)
|+|| |.|+|.|+++
T Consensus 91 pVLGICnG~QlLa~~ 105 (261)
T PRK01175 91 PIIGICNGFQVLVEL 105 (261)
T ss_pred eEEEECHHHHHHHHC
Confidence 9999 9999999984
|
|
| >cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.094 Score=51.82 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=45.9
Q ss_pred EeeccccHHHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC-chhh---hhHHHHHHHHh-
Q 007779 52 TVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR-EDEA---FKVLDTILRSA- 126 (590)
Q Consensus 52 ~~~~~~d~~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~-~~~~---g~~~~~~i~~~- 126 (590)
|..+++| .|+++|+++.+++... .++ +..+|+|||.. |.|.. .+.. ....+. |+++
T Consensus 12 ~y~e~~~--~l~~~G~~v~~~s~~~--~~~------------l~~~D~lilPG--G~~~~~~~~L~~~~~~~~~-i~~~~ 72 (198)
T cd03130 12 YYPENLE--LLEAAGAELVPFSPLK--DEE------------LPDADGLYLGG--GYPELFAEELSANQSMRES-IRAFA 72 (198)
T ss_pred ccHHHHH--HHHHCCCEEEEECCCC--CCC------------CCCCCEEEECC--CchHHHHHHHHhhHHHHHH-HHHHH
Confidence 5555554 4778999888876521 010 22357787755 45531 1111 124566 5554
Q ss_pred cCCCCccc-ccchHHHHhHh
Q 007779 127 KGDLKDEE-EVSKAQLGAFF 145 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~~ 145 (590)
...+|++| |.|.|.|++..
T Consensus 73 ~~g~pilgICgG~qlL~~~~ 92 (198)
T cd03130 73 ESGGPIYAECGGLMYLGESL 92 (198)
T ss_pred HcCCCEEEEcccHHHHHHHh
Confidence 34689999 99999999877
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase. CobB plays a role in cobalamin biosythesis catalyzing the conversion of cobyrinic acid to cobyrinic acid a,c-diamide. CobB belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobB. |
| >cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.15 Score=40.37 Aligned_cols=73 Identities=8% Similarity=-0.075 Sum_probs=48.2
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhcCCCCccc-ccch
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSK 138 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~~~PilG-CLGh 138 (590)
..+++.+.++.++......... ......+|+||+..|+..+...+.....++.+.+.+..+.|++| |.|.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~ 89 (92)
T cd03128 19 DALREAGAEVDVVSPDGGPVES---------DVDLDDYDGLILPGGPGTPDDLAWDEALLALLREAAAAGKPVLGICLGA 89 (92)
T ss_pred HHHHhCCCEEEEEeCCCCcccc---------cCCcccCCEEEECCCCcchhhhccCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 6677778888877665432211 01144679999999999886322225566663555655799999 9999
Q ss_pred HHH
Q 007779 139 AQL 141 (590)
Q Consensus 139 Q~i 141 (590)
|.+
T Consensus 90 ~~~ 92 (92)
T cd03128 90 QLL 92 (92)
T ss_pred ccC
Confidence 863
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamin |
| >cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.3 Score=40.49 Aligned_cols=72 Identities=11% Similarity=-0.027 Sum_probs=47.1
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHH-hcCCCCccc-ccc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRS-AKGDLKDEE-EVS 137 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~-~~~~~PilG-CLG 137 (590)
..+++.+.++.++.-....... ......+|+|++..|+..+.........++. +++ ...+.|++| |.|
T Consensus 19 ~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~lii~g~~~~~~~~~~~~~~~~~-i~~~~~~~~~i~~~c~g 88 (115)
T cd01653 19 DALREAGAEVDVVSPDGGPVES---------DVDLDDYDGLILPGGPGTPDDLARDEALLAL-LREAAAAGKPILGICLG 88 (115)
T ss_pred HHHHHCCCeEEEEcCCCCceec---------cCChhccCEEEECCCCCchhhhccCHHHHHH-HHHHHHcCCEEEEECch
Confidence 5677778888888665432211 0113457899999999887622112455666 444 444689999 999
Q ss_pred hHHH
Q 007779 138 KAQL 141 (590)
Q Consensus 138 hQ~i 141 (590)
.|.+
T Consensus 89 ~~~l 92 (115)
T cd01653 89 AQLL 92 (115)
T ss_pred hHhH
Confidence 9999
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-depende |
| >KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.13 Score=52.13 Aligned_cols=74 Identities=16% Similarity=0.066 Sum_probs=41.8
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH----HHHh-cC-CCCcc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI----LRSA-KG-DLKDE 133 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~----i~~~-~~-~~Pil 133 (590)
.|.+.-|+.|.-++-|+. +++.. ..++-..||++-.|=-.-. +...+.+.| +++. +| ..|+-
T Consensus 84 K~aEsgGARViPli~nep--Ee~lf-------qklelvNGviftGGwak~~---dY~~vvkkifnk~le~nDaGehFPvy 151 (340)
T KOG1559|consen 84 KLAESGGARVIPLIYNEP--EEILF-------QKLELVNGVIFTGGWAKRG---DYFEVVKKIFNKVLERNDAGEHFPVY 151 (340)
T ss_pred HHHHcCCceEEEEecCCc--HHHHH-------HHHHHhceeEecCcccccc---cHHHHHHHHHHHHHhccCCccccchh
Confidence 445555898887776653 22110 1144446898877732222 443333332 3332 22 48999
Q ss_pred c-ccchHHHHhHh
Q 007779 134 E-EVSKAQLGAFF 145 (590)
Q Consensus 134 G-CLGhQ~i~~~~ 145 (590)
| |||+..|...-
T Consensus 152 g~CLGFE~lsmiI 164 (340)
T KOG1559|consen 152 GICLGFELLSMII 164 (340)
T ss_pred hhhhhHHHHHHHH
Confidence 9 99999887644
|
|
| >COG2313 IndA Uncharacterized enzyme involved in pigment biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=91.26 E-value=2.1 Score=43.91 Aligned_cols=189 Identities=20% Similarity=0.207 Sum_probs=98.1
Q ss_pred cEEEEEcC---CCCcccCCCchhhHHHHHHHHh---------hcCC---CCCHHHHHHHHHHhcCCccCCCCCCCCHHHH
Q 007779 193 SIMGGGGS---IGPHYSGNDPREMRLVGALREV---------LAGG---HLGYEEVQGVLRDVLPLQVDNKAPGVSESLL 257 (590)
Q Consensus 193 ~im~~~h~---~gvQfHPEs~~~m~L~~~L~kl---------~~G~---~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qi 257 (590)
.|.|+... +|.+|--+-+.-.+..++++.- ..|+ -|+.+|...+++.=- .-++|-..+
T Consensus 26 PvVaLESTIisHGMPypqn~ema~~ve~iiR~~GavpAtIaii~G~i~iGLs~eelE~la~~~~-------a~KvsrrDl 98 (310)
T COG2313 26 PVVALESTIISHGMPYPQNVEMAREVEEIIRDQGAVPATIAIIGGKIKIGLSKEELELLAREGN-------AMKVSRRDL 98 (310)
T ss_pred CEEEEeeeeeecCCCCCcHHHHHHHHHHHHHhcCCcceeEEEeccEEEeecCHHHHHHHhhcCc-------cceeeccch
Confidence 47787665 6666632223333355555552 2233 466666655554331 224444444
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCCCCceEEccCCCCCC---ccccchHHHHHHHhcCCCcEEeecCCC
Q 007779 258 SAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNT---RFFRSTLFVAAVRSCYGESCLLHGAEW 334 (590)
Q Consensus 258 gAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~~~vD~~GtGgDG~~---t~niST~laA~vlAa~Gv~V~kHGnr~ 334 (590)
+|.+|.+-.|-|-=--.=++-++. ...++-+=|+||..++ ||-+|.=|- =+|..++-|+--|..+
T Consensus 99 -~~vvA~~~~gaTTVAaTMi~A~~a---------GI~vfaTGGiGGVHrGAe~t~DISaDL~--ELa~T~v~vV~AGaKs 166 (310)
T COG2313 99 -PFVVAEGKNGATTVAATMILAALA---------GIKVFATGGIGGVHRGAEHTFDISADLT--ELARTNVTVVCAGAKS 166 (310)
T ss_pred -HHHHhcCcCCcchHHHHHHHHHHc---------CceEEEecCcccccCCcccccccchhHH--HHhcCCeEEEecCchh
Confidence 566666666654211111111111 1122334455555555 566655322 3456666666666666
Q ss_pred CCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCCCC--Ccchhhhhhhhc
Q 007779 335 MPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPV--ATSEKVQQFVRA 412 (590)
Q Consensus 335 vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL--~np~k~~~~lnP 412 (590)
+=.-.-+ -++||..|+++ +|| ..+-.|++.. |+-|++.|| .+|+
T Consensus 167 ILDi~~T--lE~LET~gVPv---------------vg~----~t~~fPaF~s-----R~Sg~~~pl~l~~pe-------- 212 (310)
T COG2313 167 ILDIGLT--LEVLETQGVPV---------------VGY----QTNEFPAFFS-----RESGFRVPLRLESPE-------- 212 (310)
T ss_pred hhccHHH--HHHHHhcCcce---------------eec----CCCcccchhc-----ccCCCcCccccCCHH--------
Confidence 5554333 56666666665 233 4555677653 456777764 4444
Q ss_pred cCCceEEEEecCCcchHHHHHHHHHcCCceEEEEec
Q 007779 413 QGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKG 448 (590)
Q Consensus 413 ~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G 448 (590)
....+.....++|.+.+++|-.
T Consensus 213 --------------~ia~~~~t~~~lglegg~lVaN 234 (310)
T COG2313 213 --------------EIARILATKWQLGLEGGLLVAN 234 (310)
T ss_pred --------------HHHHHHHHHHHhCCCCceEEec
Confidence 3344556677888877777764
|
|
| >cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) | Back alignment and domain information |
|---|
Probab=88.89 E-value=0.48 Score=46.24 Aligned_cols=65 Identities=8% Similarity=-0.137 Sum_probs=41.1
Q ss_pred ccCCCeEEECCCCCCCCCchhh---hhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCcee-eccCCCCcCcc
Q 007779 94 LEAQAKVCTGPTQTRPLREDEA---FKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMT-IRANAFPEATQ 160 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v-~~~~~~~~hG~ 160 (590)
...+||+||..-|=.=.+.++. ..+.++ ++-.+ ...|+|| |.|+|+...++||.. ..+ +.-.+|.
T Consensus 60 ~~~yDGlIITGApve~~~fe~v~Yw~El~~i-~dwa~~~v~stl~iCWgaqaal~~~yGi~k~~~-~~K~~Gv 130 (175)
T cd03131 60 DAKFDGLIVTGAPVEHLPFEQVDYWEELTEI-LDWAKTHVTSTLFSCWAAMAALYYFYGIKKHQL-PEKIFGV 130 (175)
T ss_pred ccCCCEEEEeCCCcccCCccccchHHHHHHH-HHHHHHhCcchHHHHHHHHHHHHHHcCcccccC-CCceEEE
Confidence 3468999999777542211221 112222 33332 2489999 999999999999986 455 5655564
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti |
| >PRK06278 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=88.40 E-value=0.59 Score=52.49 Aligned_cols=47 Identities=4% Similarity=-0.171 Sum_probs=27.8
Q ss_pred ccCCCeEEECCCCCCCCCchhh-hhHHHHHHHHhcCCCCccc-ccchHHHHhHh
Q 007779 94 LEAQAKVCTGPTQTRPLREDEA-FKVLDTILRSAKGDLKDEE-EVSKAQLGAFF 145 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~-g~~~~~~i~~~~~~~PilG-CLGhQ~i~~~~ 145 (590)
++.+|+|||..| .=....+. -...+. |+++ ..|+|| |.|+|.|++..
T Consensus 34 l~~~D~lILPGG--~~~~~~~l~~~l~~~-i~~~--g~pvlGICgG~QmLg~~~ 82 (476)
T PRK06278 34 IKDLDGLIIPGG--SLVESGSLTDELKKE-ILNF--DGYIIGICSGFQILSEKI 82 (476)
T ss_pred hccCCEEEECCC--chhhcchHHHHHHHH-HHHc--CCeEEEEcHHHHhccccc
Confidence 445578887544 21100011 112344 4444 699999 99999999876
|
|
| >PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=88.20 E-value=3.2 Score=34.67 Aligned_cols=56 Identities=21% Similarity=0.230 Sum_probs=50.8
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHh
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLA 280 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A 280 (590)
|+++|+++-+|+ +.++.+.-|...+ +.+|+.+++..=-.|=-.|.+++|+..+|+.
T Consensus 2 LK~ii~~Lh~G~--~~e~vk~~F~~~~--------~~Vs~~EI~~~Eq~Li~eG~~~eeiq~LCdv 57 (71)
T PF04282_consen 2 LKEIIKRLHEGE--DPEEVKEEFKKLF--------SDVSASEISAAEQELIQEGMPVEEIQKLCDV 57 (71)
T ss_pred HHHHHHHHhCCC--CHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCCHHHHHHHhHH
Confidence 689999999997 7899999999999 7899999999988887799999999999863
|
|
| >TIGR01382 PfpI intracellular protease, PfpI family | Back alignment and domain information |
|---|
Probab=87.48 E-value=1.6 Score=41.15 Aligned_cols=47 Identities=9% Similarity=-0.110 Sum_probs=33.8
Q ss_pred CCCeEEECCCCCCCCCchhhhhHHHHHHHHh-cCCCCccc-ccchHHHHhH
Q 007779 96 AQAKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 96 ~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~ 144 (590)
.+|.|++..|++ +....+.....+. ++++ ....|+.+ |-|.+.|+.+
T Consensus 60 ~~D~vvv~Gg~~-~~~~~~~~~l~~~-l~~~~~~~~~i~~ic~G~~~La~a 108 (166)
T TIGR01382 60 EYDALVIPGGRA-PEYLRLNNKAVRL-VREFVEKGKPVAAICHGPQLLISA 108 (166)
T ss_pred HCcEEEECCCCC-HHHhccCHHHHHH-HHHHHHcCCEEEEEChHHHHHHhc
Confidence 479999988877 4422223456777 6664 45689999 9999999974
|
The member of this family from Pyrococcus horikoshii has been solved to 2 Angstrom resolution. It is an ATP-independent intracellular protease that crystallizes as a hexameric ring. Cys-101 is proposed as the active site residue in a catalytic triad with the adjacent His-102 and a Glu residue from an adjacent monomer. A member of this family from Bacillus subtilis, GSP18, has been shown to be expressed in response to several forms of stress. A role in the degradation of small peptides has been suggested. A closely related family consists of the thiamine biosynthesis protein ThiJ and its homologs. |
| >PRK00784 cobyric acid synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.45 E-value=0.7 Score=51.98 Aligned_cols=71 Identities=13% Similarity=-0.012 Sum_probs=45.9
Q ss_pred cc-cHHHHHH-hCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCch-h---hhhHHHHHHHH-hcC
Q 007779 56 DL-DSALIDQ-LGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRED-E---AFKVLDTILRS-AKG 128 (590)
Q Consensus 56 ~~-d~~~~~~-lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~-~---~g~~~~~~i~~-~~~ 128 (590)
|| |...|++ .|+++..++..+ + +...|+|+|..|. |.... + ...+.+. |++ ...
T Consensus 264 ~f~nl~~l~~~~g~~v~~~s~~~----~------------l~~~d~lilpGg~--~~~~~~~~~~~~~l~~~-i~~~~~~ 324 (488)
T PRK00784 264 NFTDFDPLRAEPGVDVRYVRPGE----P------------LPDADLVILPGSK--NTIADLAWLRESGWDEA-IRAHARR 324 (488)
T ss_pred CccChHHHhhcCCCeEEEECCcc----c------------cccCCEEEECCcc--chHHHHHHHHHcCHHHH-HHHHHHc
Confidence 45 3366776 898888885532 1 3345889998887 43211 1 1114455 554 445
Q ss_pred CCCccc-ccchHHHHhHh
Q 007779 129 DLKDEE-EVSKAQLGAFF 145 (590)
Q Consensus 129 ~~PilG-CLGhQ~i~~~~ 145 (590)
..|++| |.|+|.|+...
T Consensus 325 g~pilg~C~G~~~L~~~~ 342 (488)
T PRK00784 325 GGPVLGICGGYQMLGRRI 342 (488)
T ss_pred CCeEEEECHHHHHHhhhc
Confidence 699999 99999999987
|
|
| >cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=87.05 E-value=1.6 Score=41.90 Aligned_cols=47 Identities=15% Similarity=-0.035 Sum_probs=33.1
Q ss_pred CCCeEEECCCCCCCCCchhhhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 96 AQAKVCTGPTQTRPLREDEAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 96 ~~~~ivlspGPg~P~~~~~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
.+|.|++..||+. ..........++ +++ +....||.| |-|.+.|+.+
T Consensus 76 ~~D~liv~GG~~~-~~~~~~~~~~~~-l~~~~~~~k~i~~ic~G~~~La~a 124 (180)
T cd03169 76 DYDALVIPGGRAP-EYLRLDEKVLAI-VRHFAEANKPVAAICHGPQILAAA 124 (180)
T ss_pred HCCEEEEcCCCCh-hhhccCHHHHHH-HHHHHHcCCEEEEECcHHHHHHHc
Confidence 4699999888753 211122446677 655 555689999 9999999986
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated | Back alignment and domain information |
|---|
Probab=86.77 E-value=14 Score=41.06 Aligned_cols=157 Identities=12% Similarity=0.039 Sum_probs=93.7
Q ss_pred HHHHHHHhhcCC---CCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHH--HHHHHHHhhhhcCCCCC
Q 007779 215 LVGALREVLAGG---HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDR--ELKAYCLAFDDELGPPP 289 (590)
Q Consensus 215 L~~~L~kl~~G~---~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~e--Elag~~~A~~~~~~~~~ 289 (590)
+++.|.....+. ....+..+.+.+.++ .-.+++.-+-.++-.++-+....+ -...+.+.+.+.....+
T Consensus 142 lk~~l~~~~~~~~~~~~~~~~~~~~~~~L~-------~~gv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~ 214 (424)
T PRK05703 142 LKNLLEDQLSGLRQVERIPPEFAELYKRLK-------RSGLSPEIAEKLLKLLLEHMPPRERTAWRYLLELLANMIPVRV 214 (424)
T ss_pred HHHHHHHHHhhhcccccchHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCccc
Confidence 777777666543 223445566667777 788999888888888876655444 34455555554332211
Q ss_pred ---CCCCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHH----HhcCCCC--CCCHHH
Q 007779 290 ---VADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQML----KFMGAST--NLSVLQ 360 (590)
Q Consensus 290 ---~~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvL----eaLGi~i--~~s~e~ 360 (590)
......+-.+|++|.|+.|+-...+ +.+.+...|.+|+.-..+. -+.|. .+-| +.+|+++ ..++++
T Consensus 215 ~~~~~~~~~i~~vGptGvGKTTt~~kLA-~~~~~~~~g~~V~li~~D~--~r~~a--~eqL~~~a~~~~vp~~~~~~~~~ 289 (424)
T PRK05703 215 EDILKQGGVVALVGPTGVGKTTTLAKLA-ARYALLYGKKKVALITLDT--YRIGA--VEQLKTYAKIMGIPVEVVYDPKE 289 (424)
T ss_pred cccccCCcEEEEECCCCCCHHHHHHHHH-HHHHHhcCCCeEEEEECCc--cHHHH--HHHHHHHHHHhCCceEccCCHHh
Confidence 1112367789999999876544332 2222124567777654433 23333 3333 3477764 467777
Q ss_pred HHHHHHhc-cCceEeecchhhChH
Q 007779 361 AKELLEDE-EIGFAYVSLREARPS 383 (590)
Q Consensus 361 a~~~Le~~-g~gf~fl~a~~~~Pa 383 (590)
..+.|++. +.-+++++.+-+.|.
T Consensus 290 l~~~l~~~~~~DlVlIDt~G~~~~ 313 (424)
T PRK05703 290 LAKALEQLRDCDVILIDTAGRSQR 313 (424)
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCC
Confidence 77777653 467888888877665
|
|
| >cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=83.66 E-value=3.3 Score=38.87 Aligned_cols=92 Identities=8% Similarity=-0.022 Sum_probs=53.1
Q ss_pred ceeEeeccccH-------HHHHHhCCceEEEeCC---CCCccccccC-CCCCcccc----ccCCCeEEECCCCCCCCCch
Q 007779 49 IRLTVKADLDS-------ALIDQLGLKESDIINP---AISSSYRSSK-LPKPNQTL----LEAQAKVCTGPTQTRPLRED 113 (590)
Q Consensus 49 ~~~~~~~~~d~-------~~~~~lg~~~~v~rnd---~~~~~~~~~~-~~~~~~~~----~~~~~~ivlspGPg~P~~~~ 113 (590)
+.+++.+.|+- ..|++.|.++.++--+ .+..+. .. ...++... ...+|.|++--||+ +....
T Consensus 2 v~il~~~gf~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~--g~~~i~~d~~~~~~~~~~~D~lvvpGG~~-~~~~~ 78 (165)
T cd03134 2 VAILAADGFEDVELTYPLYRLREAGAEVVVAGPEAGGEIQGKH--GYDTVTVDLTIADVDADDYDALVIPGGTN-PDKLR 78 (165)
T ss_pred EEEEcCCCchHHHHHHHHHHHHHCCCEEEEEccCCCcccccCc--CceeecCCCChHHCCHHHCCEEEECCCCC-hhhhc
Confidence 45667777766 3456668888877544 222111 00 01111111 12469999988884 33221
Q ss_pred hhhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 114 EAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 114 ~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
+....++. |++ +....|+.+ |-|-+.|+++
T Consensus 79 ~~~~~~~~-l~~~~~~~~~i~~ic~G~~~La~a 110 (165)
T cd03134 79 RDPDAVAF-VRAFAEAGKPVAAICHGPWVLISA 110 (165)
T ss_pred cCHHHHHH-HHHHHHcCCeEEEEchHHHHHHhc
Confidence 23456777 554 556699999 9999999874
|
A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 590 | |||
| 1vqu_A | 374 | Anthranilate phosphoribosyltransferase 2; 17130499 | 4e-11 | |
| 3qr9_A | 377 | Anthranilate phosphoribosyltransferase; anthranili | 9e-11 | |
| 1o17_A | 345 | Anthranilate PRT, anthranilate phosphoribosyltrans | 3e-08 | |
| 1khd_A | 345 | Anthranilate phosphoribosyltransferase; type 3 PRT | 9e-08 | |
| 2elc_A | 329 | Trp D, anthranilate phosphoribosyltransferase; str | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Length = 374 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-11
Identities = 72/409 (17%), Positives = 126/409 (30%), Gaps = 106/409 (25%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAY 277
L++++ G L + +++ L + V L A L + EL
Sbjct: 30 LLQQLIDGESLSRSQAAELMQGWL-------SEAVPPELSGAILTALNFKGVSADELTGM 82
Query: 278 CLAFDDELGPPPVADVKSLTHYGEPY----------DGNTRFFRSTL--FVAAVRSCYGE 325
+ + L P+ DG++ F ST FVAA
Sbjct: 83 AEVLQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAA------- 135
Query: 326 SCLL----HGAEWMPPKGG---VTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLR 378
+ + HG G V E +G + S + + L++ I F +
Sbjct: 136 AYGVPVAKHGNRSASSLTGSADVLEA-----LGVNLGASPEKVQAALQEVGITFLF---- 186
Query: 379 EAR---PSLYSLIGLREHIKKR-------P---PVATSEKVQQFVRAQGREAIVAGFYHE 425
A P+L ++ LR ++ R P P+ Q V G +
Sbjct: 187 -APGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLR--------PTGQ-----VVGLFTP 232
Query: 426 GYEEPLLMLMKRRGVHSGLVVKGEEG----ALSMTTRLRSVNASKGLPVNYCSGFRSLNV 481
+ + G +V+ G E L T L ++
Sbjct: 233 KLLTTVAQALDNLGKQKAIVLHGRERLDEAGLGDLTDLAVLS------------------ 274
Query: 482 ESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD---RSVSKNIELGLAALRGE-KGPTY 537
DG + + +N G P P V +N E+ A L+G+
Sbjct: 275 ------DGELQLT---TINPQEVGVTPA--PIGALRGGDVQENAEILKAVLQGKGTQAQQ 323
Query: 538 DRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKIS 586
D + LNA + + G D + + A+E + +G A +L +
Sbjct: 324 DAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFL 372
|
| >3qr9_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, magnesium binding, phosphoribosyl pyrophosphate transferase; 1.87A {Mycobacterium tuberculosis} PDB: 1zvw_A* 2bpq_A Length = 377 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 48/190 (25%)
Query: 416 EAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG----ALSMTTRLRSVNASKGLPVN 471
A + G E + + R LVV G++G + T+ + V
Sbjct: 214 RAGLIGCAFADLAEVMAGVFAARRSS-VLVVHGDDGLDELTTTTTSTIWRVA-------- 264
Query: 472 YCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADR------SVSKNIELG 525
G + + + +GF RA N
Sbjct: 265 ----------------AGSVDKL---TFDPAGFGF-----ARAQLDQLAGGDAQANAAAV 300
Query: 526 LAALRGEKGPTYDRIVLNAGMVDHLLGC-----DGAEDVSVAMDRAREAIDSGKALKRLL 580
A L G +GP D +VLNA + + RA AID+G A + L
Sbjct: 301 RAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLA 360
Query: 581 NYIKISHKLK 590
+++ ++
Sbjct: 361 RWVRFGRQIL 370
|
| >1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Length = 345 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-08
Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 40/179 (22%)
Query: 419 VAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG----ALSMTTRLRSVNASKGLPVNYCS 474
+ G + + + + L + ++V GE G + T ++ V+
Sbjct: 189 LMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVS----------- 237
Query: 475 GFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD---RSVSKNIELGLAALRG 531
+ ++N +++G P P S + + A G
Sbjct: 238 -------------KRGIEEV---KLNVTDFGISPI--PIEKLIVNSAEDSAIKIVRAFLG 279
Query: 532 EKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
+ + I +N + L D D + A I+ +L +L I ++ +
Sbjct: 280 KDEHVAEFIKINTAVA--LFALDRVGDFREGYEYADHLIEK--SLDKLNEIISMNGDVT 334
|
| >1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Length = 345 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 9e-08
Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 39/171 (22%)
Query: 416 EAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGE---EGALSMTTRLRSVNASKGLPVNY 472
+ G Y P+ +K G + VV G E A+ T++ +N
Sbjct: 200 PKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELN--------- 250
Query: 473 CSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRAD---RSVSKNIELGLAAL 529
+G +++ ++G + + +N ++ L
Sbjct: 251 ---------------NGEIESY---QLSPQDFGLQSY--SLNALQGGTPEENRDILARLL 290
Query: 530 RGEKGPTYDRIV-LNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRL 579
+G+ + R V N + LL G +++ A E I SG A +R+
Sbjct: 291 QGKGDAAHARQVAANVAL---LLKLFGQDNLRHNAQLALETIRSGTAFERV 338
|
| >2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Length = 329 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 1e-07
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 521 NIELGLAALRG-EKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRL 579
N L L+G EKGP D + L AG + + ARE + SG+A L
Sbjct: 263 NAALARRLLKGEEKGPLADAVALAAGAG--FYAAGKTPSLKEGVALAREVLASGEAYLLL 320
Query: 580 LNYIKIS 586
Y+
Sbjct: 321 ERYVAFL 327
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 5e-06
Identities = 53/387 (13%), Positives = 105/387 (27%), Gaps = 120/387 (31%)
Query: 227 HLGYE--EVQGVLRDVLPLQVDN-----KAPGVSESLLSAFLIGQRMNRETDRELKAYCL 279
H+ +E E Q +D+L + D V + S + E
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL---------SKEE------ 50
Query: 280 AFDDELG-PPPVADVK----SLTHYGEPYDGNTRFFRSTL-----FVAA----------- 318
D + V+ +L E + +F L F+ +
Sbjct: 51 -IDHIIMSKDAVSGTLRLFWTLLSKQE--EMVQKFVEEVLRINYKFLMSPIKTEQRQPSM 107
Query: 319 VRSCYGESCL--LHGAEWMPPKGGVT-EEQMLKFMGASTNL----------------SVL 359
+ Y L+ + K V+ + LK A L + +
Sbjct: 108 MTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166
Query: 360 QAKELLEDEEI------GFAYVSLREA-RP--------SLYSLIGL----REHIKKRPPV 400
A ++ ++ +++L+ P L I R +
Sbjct: 167 -ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 401 ATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALS------ 454
+Q +R + YE LL+L V + A +
Sbjct: 226 RI-HSIQAELRRL--------LKSKPYENCLLVL---LNVQNAKAWN----AFNLSCKIL 269
Query: 455 MTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVS-RQSFNLEVNASNYGFEPTNTPR 513
+TTR + V ++ S + ++ ++ + + P + PR
Sbjct: 270 LTTRFKQV-------TDFLSAATTTHISLDHHSMTLTPDEV--KSLLLKYLDCRPQDLPR 320
Query: 514 ADRSVSKNIELGLAALRGEKGP-TYDR 539
+ + L + A G T+D
Sbjct: 321 EVLTTNP-RRLSIIAESIRDGLATWDN 346
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 59/400 (14%), Positives = 112/400 (28%), Gaps = 147/400 (36%)
Query: 54 KADLDSALIDQ-----LGLKESDII---NPAISSSYR--SSKLPKPNQT----------- 92
+ D + L +E D I A+S + R + L K +
Sbjct: 30 VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI 89
Query: 93 ----LLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAM 148
L+ P+ + ++ ++ + AK ++ + K
Sbjct: 90 NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--------- 140
Query: 149 TIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGG-SIGPHYSG 207
R+A L+ P + I +G + G G +
Sbjct: 141 -----------------RQA-------LLELRPAKNVLI---DG--VLGSGKTW------ 165
Query: 208 NDPREMRLVG-ALR-----EVLAGG----HLG-YEEVQGVLRDV--LPLQVDNKAPGVSE 254
+ + +L + VL + L Q+D P +
Sbjct: 166 -------VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---PNWTS 215
Query: 255 SLLSAFLIGQRMN--RETDREL---KAY--CL-AFDDELGPPPVADVKSLTHYGEPYDGN 306
+ I R++ + R L K Y CL + V + K+ ++ +
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNAKAW----NAFNLS 265
Query: 307 ------TRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQ 360
TRF + T F++A L H +T +++ L
Sbjct: 266 CKILLTTRFKQVTDFLSAAT--TTHISLDH------HSMTLTPDEVKS----------LL 307
Query: 361 AKELLEDEEIGFAYVSL-REAR---PSLYSLIG--LREHI 394
K L + L RE P S+I +R+ +
Sbjct: 308 LKYLDCRPQ------DLPREVLTTNPRRLSIIAESIRDGL 341
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 63/462 (13%), Positives = 125/462 (27%), Gaps = 125/462 (27%)
Query: 2 NTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADL-DSA 60
N + S ++ I + RRL S+ + N L+ V ++ ++
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAEL---RRLLKSKPYE----NCLL-------VLLNVQNAK 257
Query: 61 LIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLD 120
+ L I+ +++ ++ L A + + L DE +L
Sbjct: 258 AWNAFNLS-CKIL---LTTRFKQV-----TDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 121 TILRSAKGDLKDEEEVSK------AQLGAFFSAMTIRANAFPEATQWSEGE--RRAMNTF 172
L DL EV + + + + ++N
Sbjct: 309 KYLDCRPQDLP--REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 173 WPLLMRAL-------PPDV-IFIADPEG--SIMGGGGSIGPHYSGNDPREMRLVGALREV 222
P R + PP I P S++ +D + + +
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHI----PTILLSLIWFDV------IKSDVMVV-VNKLHKYS 415
Query: 223 LAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFD 282
L +E + + ++ K +E L ++ + K +
Sbjct: 416 LVEKQ--PKESTISIPS---IYLELKVKLENEYALHRSIV------DHYNIPKTFDS--- 461
Query: 283 DELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLH--GAEWMPPKGG 340
D+L PP + D Y F+ + + H E
Sbjct: 462 DDLIPPYL-D-----QY---------FYS---HIG-----H------HLKNIE------- 485
Query: 341 VTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPV 400
E+M F + L+ K + D A+ + +L L + +I P
Sbjct: 486 -HPERMTLFRMVFLDFRFLEQK-IRHD---STAWNASGSILNTLQQLKFYKPYICDNDPK 540
Query: 401 ATS--EKVQQFVRAQGREAIVA--------GFYHEG---YEE 429
+ F+ I + E +EE
Sbjct: 541 YERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEE 582
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| 4hkm_A | 346 | Anthranilate phosphoribosyltransferase; structural | 100.0 | |
| 1vqu_A | 374 | Anthranilate phosphoribosyltransferase 2; 17130499 | 100.0 | |
| 3r88_A | 377 | Anthranilate phosphoribosyltransferase; anthranili | 100.0 | |
| 1khd_A | 345 | Anthranilate phosphoribosyltransferase; type 3 PRT | 100.0 | |
| 2elc_A | 329 | Trp D, anthranilate phosphoribosyltransferase; str | 100.0 | |
| 1o17_A | 345 | Anthranilate PRT, anthranilate phosphoribosyltrans | 100.0 | |
| 3h5q_A | 436 | PYNP, pyrimidine-nucleoside phosphorylase; structu | 100.0 | |
| 1brw_A | 433 | PYNP, protein (pyrimidine nucleoside phosphorylase | 100.0 | |
| 1uou_A | 474 | Thymidine phosphorylase; transferase, glycosyltran | 100.0 | |
| 2tpt_A | 440 | Thymidine phosphorylase; transferase, salvage path | 100.0 | |
| 2dsj_A | 423 | Pyrimidine-nucleoside (thymidine) phosphorylase; p | 100.0 | |
| 1qdl_B | 195 | Protein (anthranilate synthase (TRPG-SUBUNIT)); tr | 99.94 | |
| 1i1q_B | 192 | Anthranilate synthase component II; tryptophan bio | 99.94 | |
| 3r75_A | 645 | Anthranilate/para-aminobenzoate synthases compone; | 99.92 | |
| 1a9x_B | 379 | Carbamoyl phosphate synthetase (small chain); amid | 99.91 | |
| 2a9v_A | 212 | GMP synthase; structural genomics, joint center fo | 99.88 | |
| 1wl8_A | 189 | GMP synthase [glutamine-hydrolyzing] subunit A; tr | 99.88 | |
| 2vpi_A | 218 | GMP synthase; guanine monophosphate synthetase, ph | 99.84 | |
| 4gud_A | 211 | Imidazole glycerol phosphate synthase subunit His; | 99.84 | |
| 1o1y_A | 239 | Conserved hypothetical protein TM1158; flavodoxin- | 99.84 | |
| 3uow_A | 556 | GMP synthetase; structural genomics consortium, SG | 99.84 | |
| 3m3p_A | 250 | Glutamine amido transferase; structural genomics, | 99.84 | |
| 3l7n_A | 236 | Putative uncharacterized protein; glutamine amidot | 99.82 | |
| 3tqi_A | 527 | GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 | 99.82 | |
| 2ywj_A | 186 | Glutamine amidotransferase subunit PDXT; uncharact | 99.82 | |
| 2ywb_A | 503 | GMP synthase [glutamine-hydrolyzing]; GMP syntheta | 99.82 | |
| 1gpm_A | 525 | GMP synthetase, XMP aminase; class I glutamine ami | 99.82 | |
| 1gpw_B | 201 | Amidotransferase HISH; lyase/transferase, complex | 99.81 | |
| 2vxo_A | 697 | GMP synthase [glutamine-hydrolyzing]; proto-oncoge | 99.81 | |
| 1ka9_H | 200 | Imidazole glycerol phosphtate synthase; riken stru | 99.79 | |
| 2w7t_A | 273 | CTP synthetase, putative cytidine triphosphate syn | 99.78 | |
| 1l9x_A | 315 | Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO | 99.76 | |
| 3fij_A | 254 | LIN1909 protein; 11172J, uncharacterized protein, | 99.76 | |
| 1vco_A | 550 | CTP synthetase; tetramer, riken structural genomic | 99.73 | |
| 2ywd_A | 191 | Glutamine amidotransferase subunit PDXT; pyridoxin | 99.73 | |
| 2nv0_A | 196 | Glutamine amidotransferase subunit PDXT; 3-layer(A | 99.71 | |
| 1q7r_A | 219 | Predicted amidotransferase; structural genomics, Y | 99.7 | |
| 1s1m_A | 545 | CTP synthase; CTP synthetase, UTP:ammonia ligase ( | 99.69 | |
| 2iss_D | 208 | Glutamine amidotransferase subunit PDXT; (beta/alp | 99.66 | |
| 2v4u_A | 289 | CTP synthase 2; pyrimidine biosynthesis, glutamine | 99.63 | |
| 3nva_A | 535 | CTP synthase; rossman fold, nucleotide binding, LI | 99.6 | |
| 3d54_D | 213 | Phosphoribosylformylglycinamidine synthase 1; alph | 99.6 | |
| 1jvn_A | 555 | Glutamine, bifunctional histidine biosynthesis pro | 99.59 | |
| 2abw_A | 227 | PDX2 protein, glutaminase; PLP-synthase, vitamin B | 99.38 | |
| 2vdj_A | 301 | Homoserine O-succinyltransferase; methionine biosy | 98.98 | |
| 2h2w_A | 312 | Homoserine O-succinyltransferase; TM0881, (EC 2.3. | 98.84 | |
| 1oi4_A | 193 | Hypothetical protein YHBO; PFPI/THIJ family, compl | 94.37 | |
| 3l4e_A | 206 | Uncharacterized peptidase LMO0363; hypothetical pr | 93.9 | |
| 3ugj_A | 1303 | Phosphoribosylformylglycinamidine synthase; amidot | 91.33 | |
| 1fy2_A | 229 | Aspartyl dipeptidase; serine protease, catalytic t | 91.06 | |
| 3l18_A | 168 | Intracellular protease I; gatase1_PFPI_LIKE, hydro | 89.6 | |
| 2rk3_A | 197 | Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha | 85.88 | |
| 2vrn_A | 190 | Protease I, DR1199; cysteine sulfenic acid, DJ-1/T | 85.17 |
| >4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=641.60 Aligned_cols=336 Identities=21% Similarity=0.296 Sum_probs=291.1
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|..+++|+|+.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+||++||++||++++.++++++
T Consensus 4 ~~~~e~l~~~~~~~~Lt~eEa~~~~~~il-------~G~~~d~QiaAfL~alr~kget~eEi~g~~~am~~~~~~v~~~~ 76 (346)
T 4hkm_A 4 ITPQQALQRTIEHREIFHDEMVDLMRQIM-------RGEVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTD 76 (346)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCSC
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCCCCCC
Confidence 34788999999999999999999999999 99999999999999999999999999999999999998887654
Q ss_pred -CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCc
Q 007779 293 -VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIG 371 (590)
Q Consensus 293 -~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~g 371 (590)
.+.||+|||||||.+|||+||+ +|+|+|++|+||+|||||+++|++|| +|+||+||+++++++++++++|++ .|
T Consensus 77 ~~~~vD~~gTGGdg~~t~niSt~-~a~v~Aa~G~~V~khG~r~~ss~~Gs--aD~LeaLG~~~~ls~~~~~~~l~~--~g 151 (346)
T 4hkm_A 77 RRHMVDIVGTGGDGSHTFNISTC-AMFVAAAGGAKVAKHGNRSVSSKSGS--ADALEALGAVIELQPEQVAASLAQ--TG 151 (346)
T ss_dssp CTTEEEEECC------CCCHHHH-HHHHHHHTTCEEEEEC---------C--HHHHHTTTCCCCCCHHHHHHHHHH--HS
T ss_pred CccceeecCCCCCCccccCcHHH-HHHHHHhcCCCeeecCCCCCCCCcCH--HHHHHHcCCCcccCHHHHHHHHHh--cC
Confidence 3479999999999999999998 99999999999999999999999999 999999999999999999999999 56
Q ss_pred eEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCC
Q 007779 372 FAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG 451 (590)
Q Consensus 372 f~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG 451 (590)
|+|+++|.|||+|++++++|++||+||++++...+ +||+++++||+||||++|.++++++++.+|.++++||||.||
T Consensus 152 ~~fl~a~~~~Pa~k~l~~~R~~lg~rT~fn~lgpL---~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~a~vv~g~~G 228 (346)
T 4hkm_A 152 IGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPL---TNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVWGRDG 228 (346)
T ss_dssp EEEECHHHHCGGGGGTHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSTHHHHHHHHHHHHTTCSEEEEEEETTT
T ss_pred cchhchhhhChhHHHHhhheeccCCCchhhhcccc---cCCCCCcceEeeccCHHHhHHHHHHHHHcCCCeEEEEecCCC
Confidence 77788999999999999999999999988876653 789999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHH
Q 007779 452 ALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAAL 529 (590)
Q Consensus 452 ~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL 529 (590)
+||+++.. +|.+++ .+|++.+ ++++|+|||++..+.+.+ ++++.+|+++++++|
T Consensus 229 ~dEis~~~---------------------~t~v~~~~~g~i~~---~~i~P~d~Gl~~~~~~~~~~g~~~e~a~~~~~vl 284 (346)
T 4hkm_A 229 MDELSLGA---------------------GTLVGELRDGQVHE---YEVHPEDFGIAMSASRNLKVADAAESRAMLLQVL 284 (346)
T ss_dssp BSSCCSSS---------------------CEEEEEEETTEEEE---EEECGGGGTCCCCC---------CCHHHHHHHHH
T ss_pred chhhhhcc---------------------CceEEEEeCCceeE---ecCCHHHcCCccCcccccCCCCHHHHHHHHHHHH
Confidence 99998643 355654 5787754 999999999998877765 679999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhccC
Q 007779 530 RGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589 (590)
Q Consensus 530 ~G~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~~ 589 (590)
+|++++.+|.|++|||++||++| ++.|++||+++|+++|+||+|+++|++|+++++++
T Consensus 285 ~g~~~~~~d~v~lnaa~~L~~~g--~a~sl~eg~~~A~~~l~sG~A~~~l~~~i~~s~~~ 342 (346)
T 4hkm_A 285 DNVPGPALDIVALNAGAALYVAG--VADSIADGIVRARQVLADGSARACLDAYVAFTQQA 342 (346)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 78999999999999999999999999999999864
|
| >1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-78 Score=639.60 Aligned_cols=340 Identities=19% Similarity=0.262 Sum_probs=300.8
Q ss_pred CCC--chhhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhc
Q 007779 207 GND--PREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (590)
Q Consensus 207 PEs--~~~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~ 284 (590)
|.| +..|+++++|+++.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||+++
T Consensus 17 ~~~~~~~~~~~~~~i~kl~~G~~Lt~eEa~~~~~~il-------~G~~~~~QiaAfL~Alr~kGet~eEiag~~~am~~~ 89 (374)
T 1vqu_A 17 PTSTQESSTSWYLLLQQLIDGESLSRSQAAELMQGWL-------SEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQ 89 (374)
T ss_dssp --------CCTHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTT
T ss_pred CCCCCCccCCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 555 44566899999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCC--------CCCC--CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCC
Q 007779 285 LGPP--------PVAD--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGAST 354 (590)
Q Consensus 285 ~~~~--------~~~~--~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i 354 (590)
+.++ +++. .+.||+|||||||.+|||+||+ +|+|+|++|+||+|||||++||++|| +|+||+||+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~Gv~VaKHGnR~~ss~~Gs--aDvLEaLGv~~ 166 (374)
T 1vqu_A 90 SKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTA-VAFVAAAYGVPVAKHGNRSASSLTGS--ADVLEALGVNL 166 (374)
T ss_dssp CCC-----------CCSSSCCEEEEECC---CCBCCHHHH-HHHHHHHTTCCEEEEEECC--CTTCH--HHHHHHTTCCT
T ss_pred CCccccccccccCccccCCCeeEEeCCCCCCCCccchHHH-HHHHHHhCCCCEEEECCCCCCCCCCH--HHHHHhCCCCC
Confidence 9877 5542 3579999999999999999998 99999999999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHhccCceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHH
Q 007779 355 NLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLML 434 (590)
Q Consensus 355 ~~s~e~a~~~Le~~g~gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~ 434 (590)
++++++++++|++ .||+|+++|.|||+|++++++|++||+||+++.... ++||+++++||+||||++|.++|+++
T Consensus 167 ~~~~e~~~~~l~~--~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgp---L~NPa~~~~qv~GV~~~~~~~~~a~~ 241 (374)
T 1vqu_A 167 GASPEKVQAALQE--VGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGP---LVNPLRPTGQVVGLFTPKLLTTVAQA 241 (374)
T ss_dssp TCCHHHHHHHHHH--TSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGG---GCCTTCCSEEEEECSCGGGHHHHHHH
T ss_pred CCCHHHHHHHHHH--CCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHH---hcCCCCCCceEEeecCHHHHHHHHHH
Confidence 9999999999999 566667799999999999999999999997777544 36788889999999999999999999
Q ss_pred HHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCc
Q 007779 435 MKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPR 513 (590)
Q Consensus 435 l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~ 513 (590)
++.+|.++++||||.||+||+++.. +|.|++ .+|+++ .|+|+|++||++..++.+
T Consensus 242 l~~lG~~~alVv~G~~G~dE~s~~~---------------------~t~v~~~~~g~~~---~~~i~p~d~Gl~~~~~~~ 297 (374)
T 1vqu_A 242 LDNLGKQKAIVLHGRERLDEAGLGD---------------------LTDLAVLSDGELQ---LTTINPQEVGVTPAPIGA 297 (374)
T ss_dssp HHHTTCSEEEEEEETTTBSSCCSSS---------------------CEEEEEEETTEEE---EEEECGGGGTCCCCCGGG
T ss_pred HHHcCCCeEEEEECCCCccccccCC---------------------ceEEEEEeCCEEE---EEEECHHHCCCccccccc
Confidence 9999999999999999999998643 356664 477765 499999999999887766
Q ss_pred c-CCCHHHHHHHHHHHHCCCCCchhH-HHHHHHHHHHHHhcCCCCC--CHHHHHHHHHHHHHchHHHHHHHHHHHHhc
Q 007779 514 A-DRSVSKNIELGLAALRGEKGPTYD-RIVLNAGMVDHLLGCDGAE--DVSVAMDRAREAIDSGKALKRLLNYIKISH 587 (590)
Q Consensus 514 ~-~~~~~~na~~~~~vL~G~~~~~~d-~v~lNAa~~L~l~g~g~a~--s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~ 587 (590)
+ ++++++|+++++++|+|+.++.+| .|++|||++||+.| +++ ++++|+++|+++|+||+|+++|++|+++++
T Consensus 298 l~~g~~~e~a~~~~~vL~G~~~~~~d~~v~~naa~~L~~~g--~~~~~~~~eg~~~A~~~i~sG~A~~~l~~~v~~~~ 373 (374)
T 1vqu_A 298 LRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAG--AVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLG 373 (374)
T ss_dssp GBCCSHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHT--SSCTTCHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 5 679999999999999999788999 99999999999986 778 999999999999999999999999999886
|
| >3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-77 Score=638.36 Aligned_cols=337 Identities=19% Similarity=0.239 Sum_probs=309.5
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC-
Q 007779 214 RLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD- 292 (590)
Q Consensus 214 ~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~- 292 (590)
.+.++|+++.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||++++.+++++.
T Consensus 25 t~~~il~~l~~g~~Ls~eEa~~~~~~i~-------~G~~~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~~~v~~~~~ 97 (377)
T 3r88_A 25 SWPQILGRLTDNRDLARGQAAWAMDQIM-------TGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTV 97 (377)
T ss_dssp CHHHHHHHHHTTCCCCTTHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCTTCS
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhCCcCCCccC
Confidence 4899999999999999999999999999 99999999999999999999999999999999999998877643
Q ss_pred -CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCc
Q 007779 293 -VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIG 371 (590)
Q Consensus 293 -~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~g 371 (590)
.+.||+|||||||++|||+||+ +|+|+|++|+||+|||||++||++|| +|+||+||+++++++++++++|++ .|
T Consensus 98 ~~~~vD~~gTGGdg~~T~niSt~-~A~v~Aa~Gv~VaKHGnR~~ss~~Gs--aDvLEaLGv~~~l~~e~~~~~l~~--~g 172 (377)
T 3r88_A 98 PDDAVDVVGTGGDGVNTVNLSTM-AAIVVAAAGVPVVKHGNRAASSLSGG--ADTLEALGVRIDLGPDLVARSLAE--VG 172 (377)
T ss_dssp CTTCEEEEECCCCSCCBCCHHHH-HHHHHHHTTCCEEEEECCCSSSSCCH--HHHHHHTTCCCCCCHHHHHHHHHH--HS
T ss_pred CCCCeEEeCCCCCCcCccccHHH-HHHHHHhcCCeEEeECCCCCCCcccH--HHHHHHcCCCcccchHHHHHHHHH--hc
Confidence 3579999999999999999998 99999999999999999999999999 999999999999999999999999 56
Q ss_pred eEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCC
Q 007779 372 FAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEG 451 (590)
Q Consensus 372 f~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG 451 (590)
|+|+++|.|||+|++++++|++||+||+++....+ +||+++++||+||||++|.++|+++++.+| ++++||||.||
T Consensus 173 i~fl~a~~~hPa~k~l~~vR~~Lg~rTifN~lgpL---~NPa~~~~~liGv~~~~l~~~~a~~l~~~~-~~a~vv~G~dG 248 (377)
T 3r88_A 173 IGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPL---TNPARPRAGLIGCAFADLAEVMAGVFAARR-SSVLVVHGDDG 248 (377)
T ss_dssp EEEEEHHHHCGGGHHHHHHHHHHCSCCGGGGHHHH---CCTTCCSEEEEECSCTTTHHHHHHHHHHTT-CEEEEEEETTS
T ss_pred cccccchhhCHHHHHHHHHHHHhccCchhhhHHHh---cCcccccccccCCCCHHHhHHHHHHHHhcC-CeeEEecCCCC
Confidence 66677999999999999999999999998886654 789999999999999999999999999998 69999999999
Q ss_pred ccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHH
Q 007779 452 ALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAAL 529 (590)
Q Consensus 452 ~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL 529 (590)
+||++... +|.+++ .+|++++ ++++|+|||++..+++++ ++++++|+++++++|
T Consensus 249 lDEis~~~---------------------~t~v~~~~~g~i~~---~~i~P~d~Gl~~~~~~~l~gg~~~ena~~~~~vL 304 (377)
T 3r88_A 249 LDELTTTT---------------------TSTIWRVAAGSVDK---LTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVL 304 (377)
T ss_dssp CSSCCSSS---------------------CEEEEEEETTEEEE---EEECGGGGTCCCCCGGGGBCCSHHHHHHHHHHHH
T ss_pred Cceeeccc---------------------ccceEEEeeceeEE---EeccccccCCCcCCHHhccCCCHHHHHHHHHHHH
Confidence 99998543 356664 5777754 999999999999988876 789999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhccCC
Q 007779 530 RGEKGPTYDRIVLNAGMVDHLLGC-----DGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590 (590)
Q Consensus 530 ~G~~~~~~d~v~lNAa~~L~l~g~-----g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~~~ 590 (590)
+|++++.+|.|++|||++||+.|. +.+.|++||+++|+++|+||+|+++|++|+++|++++
T Consensus 305 ~G~~~~~~d~v~lNaa~~l~~~g~~~~~~~~~~sl~eG~~~A~e~l~sG~A~~kl~~~i~~s~~~~ 370 (377)
T 3r88_A 305 GGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQIL 370 (377)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHTC-
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998761 1234799999999999999999999999999999874
|
| >1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-77 Score=633.01 Aligned_cols=331 Identities=18% Similarity=0.256 Sum_probs=296.6
Q ss_pred hhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCC
Q 007779 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA 291 (590)
Q Consensus 212 ~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~ 291 (590)
.|+++++|+++.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||++++.+++++
T Consensus 10 ~~~~~~~i~kl~~g~~Lt~eEa~~~~~~il-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~ 82 (345)
T 1khd_A 10 IFTHQPILEKLFKSQSMTQEESHQLFAAIV-------RGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRP 82 (345)
T ss_dssp --CCHHHHHHHHTTCCCCHHHHHHHHHHHT-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCCC
T ss_pred ccCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCCC
Confidence 356889999999999999999999999999 9999999999999999999999999999999999999887764
Q ss_pred CCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCC-CCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccC
Q 007779 292 DVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP-KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370 (590)
Q Consensus 292 ~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vts-k~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~ 370 (590)
..+.||+|||||||.+|||+||+ +|+|+|++|+||+|||||++|| ++|| +|+||+||+++++++++++++|++ .
T Consensus 83 ~~~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~Gv~VakHGnr~~ss~~~Gs--aDvLeaLGv~~~~~~~~~~~~l~~--~ 157 (345)
T 1khd_A 83 DYDFADIVGTGGDGTNSINISTA-SAFVAASCGAKVAKHGNRSVCQPLAGS--CDLLQAFGIRLDMSAEDSRQALDD--L 157 (345)
T ss_dssp SSCCEEEEECCCCSSCBCCCHHH-HHHHHHHHTCCEEEEECC-----------CHHHHHTTCCTTCCHHHHHHHHHH--H
T ss_pred CCCeeeecCCCCCCCCccchHHH-HHHHHHhCCCcEEEeCCCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--C
Confidence 33589999999999999999998 9999999999999999999999 9999 899999999999999999999999 5
Q ss_pred ceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCC
Q 007779 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450 (590)
Q Consensus 371 gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~e 450 (590)
||+|+++|.|||+|++++++|++||+||+++....+ +||+++++||+||||++|.++|+++++.+|.++++|||| |
T Consensus 158 gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL---~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~G-d 233 (345)
T 1khd_A 158 NVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPL---INPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG-G 233 (345)
T ss_dssp SEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEEE-T
T ss_pred CEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEeC-C
Confidence 666677999999999999999999999988885543 788899999999999999999999999999999999999 9
Q ss_pred CccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHH
Q 007779 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAA 528 (590)
Q Consensus 451 G~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~v 528 (590)
|+||+++.+ +|.+++ .+|++++ |+|+|++||++..+++++ ++++++|+++++++
T Consensus 234 G~dEis~~~---------------------~t~v~~~~~g~i~~---~~i~p~~~G~~~~~~~~l~~g~~~e~a~~~~~v 289 (345)
T 1khd_A 234 GMDEVAIHT---------------------PTQVAELNNGEIES---YQLSPQDFGLQSYSLNALQGGTPEENRDILARL 289 (345)
T ss_dssp TBSSCCSSS---------------------CEEEEEEETTEEEE---EEECGGGGTCCCBCGGGGBCCSHHHHHHHHHHH
T ss_pred CcceecCCC---------------------ceEEEEEeCCEEEE---EEECHHHcCCCcCCccccCCCCHHHHHHHHHHH
Confidence 999998653 356664 4777654 999999999999888775 68999999999999
Q ss_pred HCCCCC-chhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHH
Q 007779 529 LRGEKG-PTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKI 585 (590)
Q Consensus 529 L~G~~~-~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~ 585 (590)
|+|+.+ +.+|.|++|||++||+.| + +|+++|+++|+++|+||+|+++|++|++.
T Consensus 290 L~G~~~~~~~d~v~~naa~~L~~~g--~-~~~~eg~~~A~~~i~sG~A~~~l~~~~~a 344 (345)
T 1khd_A 290 LQGKGDAAHARQVAANVALLLKLFG--Q-DNLRHNAQLALETIRSGTAFERVTALAAR 344 (345)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHTTT--C-CCHHHHHHHHHHHHHHTHHHHHHHHHHTC
T ss_pred HCCCCCccHHHHHHHHHHHHHHHcC--C-CCHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 999966 899999999999999986 7 89999999999999999999999999863
|
| >2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-77 Score=623.18 Aligned_cols=324 Identities=24% Similarity=0.333 Sum_probs=297.7
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCCCCc
Q 007779 217 GALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL 296 (590)
Q Consensus 217 ~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~~~v 296 (590)
++|+++.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||++++.+++++..+.|
T Consensus 2 ~~l~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~~Eiag~~~am~~~~~~~~~~~~~~v 74 (329)
T 2elc_A 2 DAVKKAILGEVLEEEEAYEVMRALM-------AGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLL 74 (329)
T ss_dssp CHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCCCSSEE
T ss_pred hHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCee
Confidence 4789999999999999999999999 999999999999999999999999999999999999988876433579
Q ss_pred eEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceEeec
Q 007779 297 THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVS 376 (590)
Q Consensus 297 D~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~fl~ 376 (590)
|+|||||||.+|||+||+ +|+|+|++|+||+|||||++||++|| +|+||+||+++++++++++++|++ .||+|++
T Consensus 75 D~~gTGGdg~~tfNiSt~-~a~v~Aa~Gv~V~kHGnr~~ss~~Gs--aDvLeaLG~~~~~~~~~~~~~l~~--~g~~fl~ 149 (329)
T 2elc_A 75 DIVGTGGDGKGLMNLSTL-AALVAAAGGVAVAKHGNRAASSRAGS--ADLLEALGVDLEAPPERVGEAIEE--LGFGFLF 149 (329)
T ss_dssp EEEECCCCSSCCCCCHHH-HHHHHHHTTCEEEEEECCCTTTTCSH--HHHHHHTTCCTTCCHHHHHHHHHH--HSEEEEE
T ss_pred EEcCCCCCCCCccccHHH-HHHHHHhCCCCEEEeCCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--CCEEEEE
Confidence 999999999999999999 99999999999999999999999999 999999999999999999999999 5666677
Q ss_pred chhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCccccc
Q 007779 377 LREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMT 456 (590)
Q Consensus 377 a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~els 456 (590)
+|.|||+|++++++|++||+||+++.... ++||+++++||+||||+.|.++++++++.+| ++++|||| ||+||++
T Consensus 150 a~~~hPa~k~~~~~R~~lg~rTvfn~lgp---L~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lG-~~alVv~G-~G~dE~~ 224 (329)
T 2elc_A 150 ARVFHPAMRHVAPVRAELGVRTVFNLLGP---LTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHG-EGADELV 224 (329)
T ss_dssp HHHHCGGGGGTHHHHHHHCSCCHHHHHTT---TCCTTCCCEEEEECSSGGGHHHHHHHHHHTT-CEEEEEEE-TTBSSCC
T ss_pred hHHhCHHHHHHHHHHHHhCCCCHHHHHHH---hcCccCCceeEEeeeCHHHHHHHHHHHHHcC-CCEEEEeC-CChhhhc
Confidence 99999999999999999999996666443 2567777899999999999999999999999 99999999 9999987
Q ss_pred cccccccccCCCCccccccccccCcceeEec-CCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCCCC-
Q 007779 457 TRLRSVNASKGLPVNYCSGFRSLNVESTFEG-DGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRGEK- 533 (590)
Q Consensus 457 ~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~-~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G~~- 533 (590)
.. +|.|++. +|+ |+++|++||++..+++++ ++++++|+++++++|+|+.
T Consensus 225 -~~---------------------~t~v~~~~~g~------~~i~p~~~G~~~~~~~~l~~g~~~e~a~~~~~vL~G~~~ 276 (329)
T 2elc_A 225 -LG---------------------ENRVVEVGKGA------YALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEK 276 (329)
T ss_dssp -SS---------------------CEEEEETTTEE------EEECGGGGTCCCCCGGGGCCCSHHHHHHHHHHHHTTCCC
T ss_pred -cC---------------------CeEEEEEECCE------EEECHHHcCCccCCcccCCCCCHHHHHHHHHHHHCCCCC
Confidence 53 3566654 442 789999999998887764 6899999999999999986
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhc
Q 007779 534 GPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISH 587 (590)
Q Consensus 534 ~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~ 587 (590)
++.+|.|++|||++||+.| +++|+++|+++|+++|+||+|+++|++|+++++
T Consensus 277 ~~~~d~v~~naa~~L~~~g--~~~~~~~g~~~A~~~i~sG~A~~~l~~~~~~~~ 328 (329)
T 2elc_A 277 GPLADAVALAAGAGFYAAG--KTPSLKEGVALAREVLASGEAYLLLERYVAFLR 328 (329)
T ss_dssp SHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 8899999999999999986 789999999999999999999999999999886
|
| >1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-76 Score=623.81 Aligned_cols=330 Identities=18% Similarity=0.220 Sum_probs=302.4
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|+++++|+++.+|++||+||++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||++++.+++++
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~- 72 (345)
T 1o17_A 1 MNINEILKKLINKSDLEINEAEELAKAII-------RGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVP- 72 (345)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCT-
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCC-
Confidence 56889999999999999999999999999 9999999999999999999999999999999999999887664
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCce
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf 372 (590)
+.||+|||||||.+|||+||+ +|+|+|++ +||+|||||++||++|| +|+||+||+++++++++++++|++ .||
T Consensus 73 -~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~-v~VaKHGnR~~ss~~Gs--aDvLEaLGv~~~~~~e~~~~~l~~--~gi 145 (345)
T 1o17_A 73 -NAIDTAGTGGDGLGTVNVSTA-SAILLSLV-NPVAKHGNRAVSGKSGS--ADVLEALGYNIIVPPERAKELVNK--TNF 145 (345)
T ss_dssp -TCEECCC----CCCBCCHHHH-HHHHHTTT-SCEEEEECCCSSSSCSH--HHHHHHHTBCCCCCHHHHHHHHHH--HSE
T ss_pred -CceeeCCCCCCCCCccchHHH-HHHHHHHc-CCEEEECCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--cCE
Confidence 589999999999999999999 99999999 99999999999999999 999999999999999999999999 566
Q ss_pred EeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCc
Q 007779 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA 452 (590)
Q Consensus 373 ~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~ 452 (590)
+|+++|.|||+|++++++|++||+||++|....+ +||+++++||+||||+.|.++++++++.+|.++++||||.+|+
T Consensus 146 ~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL---~nPa~~~~ql~Gv~~~~~~~~~A~~l~~lG~~~alVv~G~~G~ 222 (345)
T 1o17_A 146 VFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPL---TNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGI 222 (345)
T ss_dssp EEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGG---CCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEETTTB
T ss_pred EEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHh---cCccCCCeEEEEeeCHHHHHHHHHHHHHcCCCeEEEEECCCCH
Confidence 6677999999999999999999999988885543 7888889999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHC
Q 007779 453 LSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALR 530 (590)
Q Consensus 453 ~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~ 530 (590)
||+++.. +|.+++ .+|.+++ ++|+|+|||+++.+++++ ++++++|+++++++|+
T Consensus 223 dE~s~~~---------------------~t~v~~~~~g~~~~---~~i~p~d~Gl~~~~~~~l~~g~~~e~a~~~~~vL~ 278 (345)
T 1o17_A 223 DEVSPIG---------------------NTFMKIVSKRGIEE---VKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFL 278 (345)
T ss_dssp SSCCSSS---------------------EEEEEEEETTEEEE---EEEEGGGGTCCCCCGGGTBCSSHHHHHHHHHHHHH
T ss_pred HHhcccC---------------------CcEEEEEeCCeEEE---EEEChhhcCCCCCChhccCCCCHHHHHHHHHHHHC
Confidence 9998653 356654 4776654 999999999999888874 6899999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 531 GEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 531 G~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
|+.++.+|.|++|||++||+.| +++|+++|+++|+++|+ +|+++|++|+++|+.
T Consensus 279 G~~~~~~d~v~~naa~~L~~~g--~~~~~~eg~~~A~~~i~--~A~~~l~~~~~~~~~ 332 (345)
T 1o17_A 279 GKDEHVAEFIKINTAVALFALD--RVGDFREGYEYADHLIE--KSLDKLNEIISMNGD 332 (345)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHT--THHHHHHHHHHHSBC
T ss_pred CCCchHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHH--HHHHHHHHHHHHhCC
Confidence 9878899999999999999986 78999999999999999 999999999999875
|
| >3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-58 Score=494.90 Aligned_cols=297 Identities=19% Similarity=0.177 Sum_probs=264.3
Q ss_pred hhHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCC
Q 007779 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA 291 (590)
Q Consensus 212 ~m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~ 291 (590)
.|+++++|+++.+|++||++|++++|+.|| +|+++|+|+||||||+|+||||+|||+||++||+++..+++++
T Consensus 3 ~m~~~~~I~kl~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~ 75 (436)
T 3h5q_A 3 AMRMIDIIEKKRDGHTLTTEEINFFIGGYV-------KGDIPDYQASSLAMAIYFQDMNDDERVALTMAMVNSGDMIDLS 75 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCT
T ss_pred CCCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCcc
Confidence 478999999999999999999999999999 9999999999999999999999999999999999999888765
Q ss_pred C--CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhc
Q 007779 292 D--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDE 368 (590)
Q Consensus 292 ~--~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~ 368 (590)
. .+.+|+|||||||.+| ||+ +|+|+|++|+||+|||||++||++|| +|+||+| |+++++++++++++|++
T Consensus 76 ~~~~~~vD~~gTGGdG~~t---St~-~A~vvAa~Gv~VaKHGnRa~ss~~Gs--aDvLEaLpGi~~~ls~e~~~~~l~~- 148 (436)
T 3h5q_A 76 DIKGVKVDKHSTGGVGDTT---TLV-LAPLVAAVDVPVAKMSGRGLGHTGGT--IDKLEAIDGFHVEIDEATFVKLVNE- 148 (436)
T ss_dssp TSCSCCEEEEECCCTTCCH---HHH-HHHHHHHTTCCEEEECCCCSSSSCCH--HHHHTTSTTCCCCCCHHHHHHHHHH-
T ss_pred ccCCCceeecCCCCCCCCh---HHH-HHHHHHhCCCCEEeECCCCCCCcccH--HHHHHhCcCCCCCCCHHHHHHHHHH-
Confidence 3 3589999999999986 776 99999999999999999999999999 9999999 99999999999999999
Q ss_pred cCceEeec-chhhChHhHHHHhhhcccCCCCCCCcchhhhhhhh--------ccCCceEEEEec--------CCcchHHH
Q 007779 369 EIGFAYVS-LREARPSLYSLIGLREHIKKRPPVATSEKVQQFVR--------AQGREAIVAGFY--------HEGYEEPL 431 (590)
Q Consensus 369 g~gf~fl~-a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~ln--------P~~~~~~v~GV~--------h~~~~~~~ 431 (590)
.||+|++ +|.|||+|++++++|++ +||-.+.| ++| |++++++|+||| +++..+.+
T Consensus 149 -~g~~fl~~a~~~~Pa~~~l~~lR~~--~~TvfniP-----LinaSimSKKlpag~~~~vlgV~~G~gaf~~~~~~a~~l 220 (436)
T 3h5q_A 149 -NKVAVVGQSGNLTPADKKLYALRDV--TGTVNSIP-----LIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEAL 220 (436)
T ss_dssp -HSEEEECCCSSSCHHHHHHHHHHHT--TTCSSCHH-----HHHHHHHHHHHHTTCSEEEEEEEESTTSSBCSHHHHHHH
T ss_pred -cCCEEEccccccCHHHHHHHHHHhc--cCCcCChh-----hhccchhccccccCCCeEEEeeecCccccCCCHHHHHHH
Confidence 5677776 69999999999999999 67855432 478 889999999999 99999999
Q ss_pred HHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCC
Q 007779 432 LMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTN 510 (590)
Q Consensus 432 a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~ 510 (590)
+++|..+|.++ | +|.+++ .+|. +| ||+.
T Consensus 221 A~~l~~lG~~~-----G--------------------------------~~~v~~lt~~~---------~P--lG~~--- 249 (436)
T 3h5q_A 221 AHAMVRIGNNV-----G--------------------------------RNTMAIISDMN---------QP--LGRA--- 249 (436)
T ss_dssp HHHHHHHHHHH-----T--------------------------------CCEEEEEEECS---------SC--SSSE---
T ss_pred HHHHHHhhhhc-----C--------------------------------CeEEEEEcCCC---------CC--CCCC---
Confidence 99999998643 2 122222 2331 35 7764
Q ss_pred CCccCCCHHHHHHHHHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 511 TPRADRSVSKNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 511 ~~~~~~~~~~na~~~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
++++.||++ ++++|+|+ +++.+|.|++|||++||+.| .++++++|+++|+++|+||+|+++|++|+++|+.
T Consensus 250 ----~G~~~E~ae-~~~vL~G~~~~~~~d~vl~nAa~~L~~ag--~a~~~~eg~~~A~~~i~sG~A~~~l~~~v~~qGg 321 (436)
T 3h5q_A 250 ----IGNALELQE-AIDTLKGQGPKDLTELVLTLGSQMVVLAN--KAETLEEARALLIEAINSGAALEKFKTFIKNQGG 321 (436)
T ss_dssp ----EESHHHHHH-HHHHHTTCSCHHHHHHHHHHHHHHHHHTT--SCSSHHHHHHHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred ----CCCHHHHHH-HHHHHCCCCCccHHHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhCcHHHHHHHHHHHHhCC
Confidence 468999999 99999998 66799999999999999986 7889999999999999999999999999999874
|
| >1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-57 Score=489.30 Aligned_cols=293 Identities=17% Similarity=0.197 Sum_probs=253.4
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|+++++|+++..|++||+||++++|+.|| +|+++|+|+||||||+|+||||.|||+||++||++++.++++++
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~a~AM~~~~~~v~~~~ 73 (433)
T 1brw_A 1 MRMVDLIAKKRDGKALTKEEIEWIVRGYT-------NGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEMLDLSS 73 (433)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 56889999999999999999999999999 99999999999999999999999999999999999998887754
Q ss_pred --CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhcc
Q 007779 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (590)
Q Consensus 293 --~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g 369 (590)
.+.+|+|||||||.+ +||+ +|+++|++|+||+|||||++||++|| +|+||+| |+++++++++++++|++
T Consensus 74 ~~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnRa~ss~~Gs--aDvLEaL~Gv~i~ls~e~~~~~l~~-- 145 (433)
T 1brw_A 74 IRGVKVDKHSTGGVGDT---TTLV-LGPLVASVGVPVAKMSGRGLGHTGGT--IDKLESVPGFHVEISKDEFIRLVNE-- 145 (433)
T ss_dssp SCSCCEEEEECCCSSCC---HHHH-HHHHHHTTTCCEEEEECCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--
T ss_pred ccCCceeeCCCCCCCcc---hHHH-HHHHHHhCCCcEEEECCCCCCCCCCH--HHHHHHCcCceecCCHHHHHHHHHH--
Confidence 258999999999986 7887 99999999999999999999999998 8999999 99999999999999999
Q ss_pred CceEeecc-hhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhc--------cCCceEEEEe------c------CCcch
Q 007779 370 IGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--------QGREAIVAGF------Y------HEGYE 428 (590)
Q Consensus 370 ~gf~fl~a-~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP--------~~~~~~v~GV------~------h~~~~ 428 (590)
.||+|+++ +.|||+|++++++|++| ||.++.| ++|| .+++++|+|| | ++.+.
T Consensus 146 ~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNiP-----Lin~s~lskklA~G~~~~VlgVk~G~gaf~~~~de~~~l~ 218 (433)
T 1brw_A 146 NGIAIIGQTGDLTPADKKLYALRDVT--ATVNSIP-----LIASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEARRLA 218 (433)
T ss_dssp HSEEEEECCTTSCHHHHHHHHHHHHH--TCCCCHH-----HHHHHHHHHHHHHCCSEEEEEEEESTTSSCCSHHHHHHHH
T ss_pred cCeeEecCchhhCHHHHHHHHHHHhh--CCccChh-----hcCcHhhHHHHhcCCCEEEEEeecccccccCCHHHHHHHH
Confidence 56666778 59999999999999999 8866653 3566 5667778877 6 56666
Q ss_pred HHHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCC
Q 007779 429 EPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEP 508 (590)
Q Consensus 429 ~~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~ 508 (590)
+.+.++++.+|.++.+++++. + +++|+
T Consensus 219 ~~~v~~~~~~G~~~~~~i~~~---~------------------------------------------------~plg~-- 245 (433)
T 1brw_A 219 RVMVDIGKRVGRRTMAVISDM---S------------------------------------------------QPLGY-- 245 (433)
T ss_dssp HHHHHHHHHTTCEEEEEEEEC---S------------------------------------------------SCSSS--
T ss_pred HHHHHHHHHcCCEEEEEEcCC---C------------------------------------------------Ccccc--
Confidence 667777766776666666641 0 01221
Q ss_pred CCCCccCCCHHHHHHHHHHHHCCCC-CchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhc
Q 007779 509 TNTPRADRSVSKNIELGLAALRGEK-GPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISH 587 (590)
Q Consensus 509 ~~~~~~~~~~~~na~~~~~vL~G~~-~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~ 587 (590)
.++++.+|++. +++|+|+. .+.+|.|++|||++||+.| ++.++++|+++|+++|+||+|+++|++|+++|+
T Consensus 246 -----~~G~a~E~a~~-~~vL~G~g~~~~~d~vl~nAa~~L~~~g--~a~~~~eg~~~A~~~i~sG~A~~kl~~~i~~~~ 317 (433)
T 1brw_A 246 -----AVGNALEVKEA-IETLKGNGPHDLTELCLTLGSHMVYLAE--KAPSLDEARRLLEEAIRSGAAIAAFKTFLAAQG 317 (433)
T ss_dssp -----EESSHHHHHHH-HHHHTTCSCHHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred -----cCCCHHHHHHH-HHHHCCCCChhHHHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhC
Confidence 24689999965 89999983 2479999999999999986 789999999999999999999999999999987
Q ss_pred c
Q 007779 588 K 588 (590)
Q Consensus 588 ~ 588 (590)
.
T Consensus 318 g 318 (433)
T 1brw_A 318 G 318 (433)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-57 Score=489.55 Aligned_cols=291 Identities=17% Similarity=0.170 Sum_probs=256.4
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCCC-
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADV- 293 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~~- 293 (590)
++++|+++..|++||+||++++|+.|| +|+++|+|+||||||+|+||||.|||+||++||++++.+++++..
T Consensus 30 ~~~iI~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfLmAlr~kGeT~eEiag~a~AMr~~~~~v~~~~~~ 102 (474)
T 1uou_A 30 LPELIRMKRDGGRLSEADIRGFVAAVV-------NGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAW 102 (474)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCCGGG
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccccc
Confidence 789999999999999999999999999 999999999999999999999999999999999999988877542
Q ss_pred --CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhccC
Q 007779 294 --KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEI 370 (590)
Q Consensus 294 --~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g~ 370 (590)
+.||+|||||||.+ +||+ +|+|+|++|++|+|||||++||++|| +|+||+| |+++++++++++++|++ .
T Consensus 103 ~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnRa~ss~~GS--aDvLEaLpGv~i~ls~e~~~~~l~~--~ 174 (474)
T 1uou_A 103 RQQLVDKHSTGGVGDK---VSLV-LAPALAACGCKVPMISGRGLGHTGGT--LDKLESIPGFNVIQSPEQMQVLLDQ--A 174 (474)
T ss_dssp GGGBEEEEESCCTTCC---HHHH-HHHHHHTTTCBEEEECCCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--H
T ss_pred CCCeeEeCCCCCCCce---eHHH-HHHHHHhCCCCEEEECCCCCCCCCCH--HHHHHhCCCCCCCCCHHHHHHHHHH--c
Confidence 48999999999987 8887 99999999999999999999999999 9999999 99999999999999999 5
Q ss_pred ceEeecc-hhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhc--------cCCceEEEEe------c------CCcchH
Q 007779 371 GFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--------QGREAIVAGF------Y------HEGYEE 429 (590)
Q Consensus 371 gf~fl~a-~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP--------~~~~~~v~GV------~------h~~~~~ 429 (590)
||+|+++ +.|||+|++++++|+++ ||.++.| ++|| .+.+++|+|| | ++.+.+
T Consensus 175 Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNiP-----Linpsi~skklA~g~~~~VlgVk~G~gafm~~lde~~~la~ 247 (474)
T 1uou_A 175 GCCIVGQSEQLVPADGILYAARDVT--ATVDSLP-----LITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAK 247 (474)
T ss_dssp SEEEECCCSSSSHHHHHHHHHHHHT--TCSSCHH-----HHHHHHHHHHHHTTCSEEEEEEEEC--CCCCSHHHHHHHHH
T ss_pred CeEEecCchhhCHHHHHHHHHHhhh--CCccchh-----hcCcHHHHHHHhhcCCeEEEEeccccccccCCHHHHHHHHH
Confidence 6666778 69999999999999995 8866653 3566 5678888888 6 667777
Q ss_pred HHHHHHHHcCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCC
Q 007779 430 PLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPT 509 (590)
Q Consensus 430 ~~a~~l~~lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~ 509 (590)
.+.++++.+|.++.+++++.+ . .+|.
T Consensus 248 ~~v~~~~~~G~~~~~vitd~~---~------------------------------------------------plg~--- 273 (474)
T 1uou_A 248 TLVGVGASLGLRVAAALTAMD---K------------------------------------------------PLGR--- 273 (474)
T ss_dssp HHHHHHHHTTCCEEEEEEECS---S------------------------------------------------CSTT---
T ss_pred HHHHHHHHCCCEEEEEEecCC---C------------------------------------------------cccc---
Confidence 788888888888888887521 0 0111
Q ss_pred CCCccCCCHHHHHHHHHHHHCCCC-CchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 510 NTPRADRSVSKNIELGLAALRGEK-GPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 510 ~~~~~~~~~~~na~~~~~vL~G~~-~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
.++++.+|++.+ ++|+|+. .+.+|.|++|||++||+.| ++.++++|+++|+++|+||+|+++|++|+++|+.
T Consensus 274 ----~~G~a~E~ae~~-~vL~G~g~~~~~d~vl~nAa~~L~~aG--~a~~~~eg~~~A~e~i~sG~A~~kl~~li~~~~g 346 (474)
T 1uou_A 274 ----CVGHALEVEEAL-LCMDGAGPPDLRDLVTTLGGALLWLSG--HAGTQAQGAARVAAALDDGSALGRFERMLAAQGV 346 (474)
T ss_dssp ----EESSHHHHHHHH-HHHTTCSCHHHHHHHHHHHHHHHHHHT--SCSSHHHHHHHHHHHHHSSHHHHHHHHHHHHTTC
T ss_pred ----cCCCHHHHHHHH-HHHCCCCchhHHHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhCC
Confidence 146899999755 9999983 5679999999999999986 7899999999999999999999999999999864
|
| >2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-57 Score=489.56 Aligned_cols=304 Identities=15% Similarity=0.113 Sum_probs=250.4
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|+++++|+++.+|++||++|++++|+.|| +|+++|+|+||||||+|+||||.|||+||++||++++.+++++.
T Consensus 2 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~~ 74 (440)
T 2tpt_A 2 FLAQEIIRKKRDGHALSDEEIRFFINGIR-------DNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKS 74 (440)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCcc
Confidence 56889999999999999999999999999 99999999999999999999999999999999999998887754
Q ss_pred --C--CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHh
Q 007779 293 --V--KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLED 367 (590)
Q Consensus 293 --~--~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~ 367 (590)
. +.||+|||||||.+ +||+ +|+++|++|+||+|||||++||++|| +|+||+| |+++++++++++++|++
T Consensus 75 ~~~~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnR~~ss~~Gs--aDvLEaL~Gv~~~ls~e~~~~~l~~ 148 (440)
T 2tpt_A 75 LHLNGPIVDKHSTGGVGDV---TSLM-LGPMVAACGGYIPMISGRGLGHTGGT--LDKLESIPGFDIFPDDNRFREIIKD 148 (440)
T ss_dssp TTCSSCBEEEEECCCSSCC---HHHH-HHHHHHHTTCBEEEEECCCCTTSCCH--HHHHTTSTTCCSCCCHHHHHHHHHH
T ss_pred cccCCCeeeeCCCCCCCcc---HHHH-HHHHHHhCCCcEEEECCCCCCCcccH--HHHHHhCcCCCCCCCHHHHHHHHHH
Confidence 2 58999999999987 7887 99999999999999999999999999 9999999 99999999999999999
Q ss_pred ccCceEeecc-hhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEE
Q 007779 368 EEIGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVV 446 (590)
Q Consensus 368 ~g~gf~fl~a-~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV 446 (590)
.||+|+++ |.|||+|++++++|++| ||.++.| ++|| +.+.+++|. |.+ ++|+
T Consensus 149 --~G~~fl~a~~~~hPA~k~l~~lR~~l--rTvfNiP-----Lin~------------s~lskk~A~-----G~~-alVv 201 (440)
T 2tpt_A 149 --VGVAIIGQTSSLAPADKRFYATRDIT--ATVDSIP-----LITA------------SILAKKLAE-----GLD-ALVM 201 (440)
T ss_dssp --TSEEEEECCTTBSHHHHHHHHHHHHT--TCCCCHH-----HHHH------------HHHHHHHTT-----CCS-EEEE
T ss_pred --cCEEEEcCchhhCHHHHHHHHHHHhh--CCccChh-----hcCC------------HHHHHHHhc-----CCC-eEEE
Confidence 66777778 79999999999999999 8977763 2454 234444443 765 7776
Q ss_pred ---ecC----CCccccccccccccccCCCCccccccccccCcceeEe--cCCcEEeeeeEEEecCCCCCCCCCCCccCCC
Q 007779 447 ---KGE----EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE--GDGVSRQSFNLEVNASNYGFEPTNTPRADRS 517 (590)
Q Consensus 447 ---~G~----eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~--~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~ 517 (590)
||. +|++|++...+ +.+++ .-|..+ ...++ +. . .++...+++
T Consensus 202 dVk~G~gaf~~~~de~~~la~---------------------t~v~~~~~~G~~~---~a~it--d~-~--~plg~~~G~ 252 (440)
T 2tpt_A 202 DVKVGSGAFMPTYELSEALAE---------------------AIVGVANGAGVRT---TALLT--DM-N--QVLASSAGN 252 (440)
T ss_dssp EEEESTTSSSSSHHHHHHHHH---------------------HHHHHHHHTTCEE---EEEEE--EC-S--SCSSSCEES
T ss_pred EeccCCccccCCHHHHHHHHH---------------------HHHHHHHHcCCce---EEEec--CC-C--CchhhcCCC
Confidence 775 35566553321 11111 111111 02222 11 1 334444579
Q ss_pred HHHHHHHHHHHHCCCCC--chhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 518 VSKNIELGLAALRGEKG--PTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 518 ~~~na~~~~~vL~G~~~--~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
+.+|++. +++|+|+.. +.+|.|++|||++||+.| ++.++++|+++|+++|+||+|+++|++|+++|+.
T Consensus 253 a~E~ae~-~~vL~G~g~~~~~~d~vl~nAa~~L~~ag--~a~~~~eg~~~A~~~i~sG~A~~kl~~~v~~~~g 322 (440)
T 2tpt_A 253 AVEVREA-VQFLTGEYRNPRLFDVTMALCVEMLISGK--LAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKG 322 (440)
T ss_dssp HHHHHHH-HHHHHTSCCCHHHHHHHHHHHHHHHHHTT--SCSSHHHHHHHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred HHHHHHH-HHHHCCCCCchHHHHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhCC
Confidence 9999987 999999832 379999999999999986 7899999999999999999999999999999864
|
| >2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-56 Score=475.53 Aligned_cols=294 Identities=19% Similarity=0.165 Sum_probs=250.2
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~~~~ 292 (590)
|+++++|+++..|++||+||++++|+.|| +|++||+|+||||||+|+||||.|||+||++||++++.+++++.
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~~d~QiaAfL~Al~~kGet~eEiag~a~aM~~~~~~l~~~~ 73 (423)
T 2dsj_A 1 MNPVAFIREKREGKKHRREDLEAFLLGYL-------RDEVPDYQVSAWLMAAFLRGLDPEETLWLTETMARSGKVLDLSG 73 (423)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 56789999999999999999999999999 99999999999999999999999999999999999998887753
Q ss_pred C-CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhccC
Q 007779 293 V-KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEI 370 (590)
Q Consensus 293 ~-~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g~ 370 (590)
. ..+|+|||||||. |+||+ +|+|+|+||+||+|||||++||++|| +|+||+| |+++++++++++++|++ .
T Consensus 74 ~~~~vD~~gTGGdG~---niSt~-~a~vvAa~Gv~VaKhGnR~~ss~~Gs--aDvLEaL~Gv~i~l~~e~~~~~l~~--~ 145 (423)
T 2dsj_A 74 LPHPVDKHSSGGVGD---KVSLV-VGPILAASGCTFAKMSGRGLAHTGGT--IDKLESVPGWRGEMTEAEFLERARR--V 145 (423)
T ss_dssp SSSBEEEEEESSSCC---STHHH-HHHHHHTTTCBEEEECCCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--T
T ss_pred cCCceeEecCCCCCc---cHHHH-HHHHHHhCCCcEEEECCCCCCCCccH--HHHHHhCCCCCCCCCHHHHHHHHHH--c
Confidence 2 2799999999998 79998 99999999999999999999999999 9999999 99999999999999999 5
Q ss_pred ceEeecc-hhhChHhHHHHhhhcccC-CCCCCCcchhhhhhhh---ccCCceEEE------Eec--CCcchHHHHHHHHH
Q 007779 371 GFAYVSL-REARPSLYSLIGLREHIK-KRPPVATSEKVQQFVR---AQGREAIVA------GFY--HEGYEEPLLMLMKR 437 (590)
Q Consensus 371 gf~fl~a-~~~~Pal~~l~~vR~~Lg-~RtPL~np~k~~~~ln---P~~~~~~v~------GV~--h~~~~~~~a~~l~~ 437 (590)
||+|+++ +.|||+|++++++|++|| +||-.+-... .+| |+++++||+ |+| ++++.+.++++|..
T Consensus 146 Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgp---l~nkK~pag~~~~vldV~~G~Gaf~~~~~~~~~lA~~l~~ 222 (423)
T 2dsj_A 146 GLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASS---IMSKKLAAGARSIVLDVKVGRGAFMKTLEEARLLAKTMVA 222 (423)
T ss_dssp SEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHH---HHHHHHHHTCSEEEEEEEESSSTTCBCHHHHHHHHHHHHH
T ss_pred CEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHH---HhcCccCCCCCeEEEEeccCCCcccCCHHHHHHHHHHHHH
Confidence 5555556 899999999999999999 7982222211 256 788899999 679 88899999999999
Q ss_pred cCCceEEEEecCCCccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCccCC
Q 007779 438 RGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRADR 516 (590)
Q Consensus 438 lG~~~alVV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~ 516 (590)
+|.+. | . +.+.+ .||. +.+|+ .++
T Consensus 223 lg~~~-----G---------~-----------------------~~v~~l~dg~-----------~plg~-------~~G 247 (423)
T 2dsj_A 223 IGQGA-----G---------R-----------------------RVRALLTSME-----------APLGR-------AVG 247 (423)
T ss_dssp HHHHT-----T---------C-----------------------EEEEEEEECS-----------SCSSS-------EEE
T ss_pred HHHHc-----C---------C-----------------------eEEEEEcCCC-----------Ccccc-------cCC
Confidence 88532 1 0 11111 1221 12333 247
Q ss_pred CHHHHHHHHHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 517 SVSKNIELGLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 517 ~~~~na~~~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
++.+|++++ ++|+|+ +.+.+|.|++|||++||+.| . ++ ++|+++|+||+|+++|++|+++|+.
T Consensus 248 ~a~E~ae~i-~vL~G~g~~~~~d~vl~nAa~~L~~ag--~--~l----~~A~~~l~sG~A~~kl~~li~~~~g 311 (423)
T 2dsj_A 248 NAIEVREAI-EALKGEGPGDLLEVALALAEEALRLEG--L--DP----ALARKALEGGAALEKFRAFLEAQGG 311 (423)
T ss_dssp SHHHHHHHH-HHHTTCSCHHHHHHHHHHHHHHHHHTT--C--CT----HHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHH-HHHCCCCchhHHHHHHHHHHHHHHHcC--C--CH----HHHHHHHhcCcHHHHHHHHHHHhCC
Confidence 999999988 499998 33479999999999999986 3 55 9999999999999999999999863
|
| >1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=229.66 Aligned_cols=158 Identities=16% Similarity=0.143 Sum_probs=131.8
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|+++||.|| ++|+++|.++.++++++.+.++.. -..+|+|||+||||.|.+..+.+...++ ++
T Consensus 4 i~iid~~~s~~~~~~~~l~~~G~~~~v~~~~~~~~~~~~----------~~~~dglil~gG~~~~~~~~~~~~~~~~-i~ 72 (195)
T 1qdl_B 4 TLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIE----------RIDPDRLIISPGPGTPEKREDIGVSLDV-IK 72 (195)
T ss_dssp EEEEECSCSSHHHHHHHHHHTTCEEEEEETTTSCHHHHH----------HHCCSEEEECCCSSCTTSHHHHTTHHHH-HH
T ss_pred EEEEECCCchHHHHHHHHHhCCCEEEEEeCCCCCHHHHh----------hCCCCEEEECCCCCChhhhhhhhHHHHH-HH
Confidence 889999998 789999999999999865443311 0146999999999999855456666788 88
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----CC----------ceeEEeccchhccccCCCcEEEEe
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----EG----------ERRAMNTFWPLLMRALPPDVIFIA 188 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----~~----------~~~~~~ryHsl~v~~~p~~l~v~a 188 (590)
.+..++|+|| |+|||.|+.++||+|.+. +.+.||++. ++ +.+.+.+||++.|+.+|++++++|
T Consensus 73 ~~~~~~PvLGIC~G~QlL~~~~gg~v~~~-~~~~~g~~~~v~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~l~~~~~vla 151 (195)
T 1qdl_B 73 YLGKRTPILGVCLGHQAIGYAFGAKIRRA-RKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDA 151 (195)
T ss_dssp HHTTTSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEEECCSSCCSTTTTCCSEEEEEEEEEEEEECCCTTEEEEE
T ss_pred HhcCCCcEEEEehHHHHHHHHhCCEEecc-CCCcCCCceEEEECCCCHhHHHhcCCCceEEeccccchhhhCCCCcEEEE
Confidence 7777899999 999999999999999998 778899764 12 268899999999999999999999
Q ss_pred -e-cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHH
Q 007779 189 -D-PEGSIMGGGGS----IGPHYSGND---PREMR-LVGALR 220 (590)
Q Consensus 189 -~-~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~ 220 (590)
+ ++|.++|++|+ ||||||||. +.+.+ +++|++
T Consensus 152 ~s~~~g~i~a~~~~~~~~~gvQfHPE~~~~~~g~~l~~~f~~ 193 (195)
T 1qdl_B 152 ISAEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLN 193 (195)
T ss_dssp EESSSCCEEEEEESSSSEEEESSBTTSTTCTTHHHHHHHHHH
T ss_pred EECCCCcEEEEEeCCCCEEEEecCCCCCCCccHHHHHHHHHh
Confidence 7 78999999996 999999997 44666 778876
|
| >1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-27 Score=226.72 Aligned_cols=162 Identities=14% Similarity=0.119 Sum_probs=124.7
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|.++||+|| ++|+++|.++.+++++. +.++..+.+.. . ..+++|||||||+|. +.+...++ +
T Consensus 2 ~i~iiDn~~s~~~~i~~~l~~~G~~~~v~~~~~-~~~~i~~~l~~-----~-~~~~iil~gGpg~~~---~~~~~~~l-~ 70 (192)
T 1i1q_B 2 DILLLDNIDSFTWNLADQLRTNGHNVVIYRNHI-PAQTLIDRLAT-----M-KNPVLMLSPGPGVPS---EAGCMPEL-L 70 (192)
T ss_dssp EEEEEECSCSSHHHHHHHHHHTTCEEEEEETTS-CSHHHHHHHTT-----C-SSEEEEECCCSSCGG---GSTTHHHH-H
T ss_pred cEEEEECCccHHHHHHHHHHHCCCeEEEEECCC-CHHHHHHHhhh-----c-cCCeEEECCCCcCch---hCchHHHH-H
Confidence 6899999998 67888899999999983 22221100000 1 134699999999998 66777777 8
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEeec
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
+.+..++|+|| |+|||.|+.++||++.+. +.+.||.+. . ++.+.+.+|||+.|..+|++++++|+.
T Consensus 71 ~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~-~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~lp~~~~v~a~~ 149 (192)
T 1i1q_B 71 TRLRGKLPIIGICLGHQAIVEAYGGYVGQA-GEILHGKATSIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHF 149 (192)
T ss_dssp HHHBTTBCEEEETHHHHHHHHHTSCCCCC----CCSSEEEEEEECCCGGGTTSCSSEEEEECCC---CCCCTTCEEEEEE
T ss_pred HHHhcCCCEEEECcChHHHHHHhCCEEEeC-CCcEecceeEEecCCChHHhcCCCCcEEEechhhHhhhCCCccEEEECC
Confidence 88777899999 999999999999999988 678899764 1 236899999999999999999999966
Q ss_pred CCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhh
Q 007779 191 EGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVL 223 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~ 223 (590)
|+.+||++|+ ||||||||+ +.|.+ +++|++.+.
T Consensus 150 ~~~~~ai~~~~~~~~gvQfHPE~~~~~~g~~il~nf~~~~~ 190 (192)
T 1i1q_B 150 NGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAWAQ 190 (192)
T ss_dssp TTEEEEEEETTTTEEEESSBTTSTTCTTHHHHHHHHHHHHT
T ss_pred CCcEEEEEECCCCEEEEEccCcccCCcccHHHHHHHHHHHh
Confidence 7899999985 999999997 46776 888887653
|
| >3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=250.41 Aligned_cols=161 Identities=16% Similarity=0.126 Sum_probs=131.2
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh--hhhHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE--AFKVLD 120 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~--~g~~~~ 120 (590)
.+|+++|+-|| ++++++|.++.|+++|.. .. ...+|+||||||||+|.+..+ ...+.+
T Consensus 447 k~IlviD~gdsf~~~l~~~l~~~G~~v~Vv~~d~~-~~-------------~~~~DgIIlsGGPg~p~d~~~p~i~~~~~ 512 (645)
T 3r75_A 447 CRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDA-VD-------------LARYDVVVMGPGPGDPSDAGDPRIARLYA 512 (645)
T ss_dssp CEEEEEESSCTHHHHHHHHHHHTTCEEEEEETTCC-CC-------------GGGCSEEEECCCSSCTTCTTSHHHHHHHH
T ss_pred CEEEEEECCccHHHHHHHHHHHCCCEEEEEECCCc-cc-------------ccCCCEEEECCCCCChhhhhhhhHHHHHH
Confidence 47999999998 788999999999999862 10 335699999999999984322 113556
Q ss_pred HHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----CCceeEEeccchhcc--------ccCCCcEEE
Q 007779 121 TILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EGERRAMNTFWPLLM--------RALPPDVIF 186 (590)
Q Consensus 121 ~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~~~~~~~~ryHsl~v--------~~~p~~l~v 186 (590)
+ |+. +..++|+|| |||||+|+.+|||+|.+. +.++||+++ .+.++....||++.| ..+|+++++
T Consensus 513 l-I~~a~~~~iPiLGIClG~QlLa~alGG~V~~~-~~~~~G~~~~i~~~~~~l~~~~~~~~~v~~~h~~~~~~lp~g~~v 590 (645)
T 3r75_A 513 W-LRHLIDEGKPFMAVCLSHQILNAILGIPLVRR-EVPNQGIQVEIDLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAI 590 (645)
T ss_dssp H-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEEEEETTEEEEEEEEEEEEEBCSCSEEEETTTEEEEE
T ss_pred H-HHHHHHCCCCEEEECHHHHHHHHHhCCEEEcC-CCcccccceEEeeecCcceecCCCcEEEEEehhhccccCCCCeEE
Confidence 6 665 456899999 999999999999999999 899999876 355566666776666 358899999
Q ss_pred Ee-ecCCcEEEEEcC--CCCcccCCC---chhhH-HHHHHHHhhcC
Q 007779 187 IA-DPEGSIMGGGGS--IGPHYSGND---PREMR-LVGALREVLAG 225 (590)
Q Consensus 187 ~a-~~~g~im~~~h~--~gvQfHPEs---~~~m~-L~~~L~kl~~G 225 (590)
+| ++||.|||++|+ ||||||||+ +.|.. |+|||+.+...
T Consensus 591 ~A~s~dg~i~Ai~~~~~~GVQFHPE~~~t~~G~~Ll~nFl~~~~~~ 636 (645)
T 3r75_A 591 SRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIRR 636 (645)
T ss_dssp EECTTTCBEEEEEETTEEEESSBTTSTTCTTHHHHHHHHHHHHTTT
T ss_pred EEEcCCCcEEEEEcCCEEEEEeCCeecCCcchHHHHHHHHHHHHhc
Confidence 99 889999999999 999999998 56777 99999888654
|
| >1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=231.02 Aligned_cols=159 Identities=8% Similarity=-0.007 Sum_probs=125.9
Q ss_pred cceeEeecccc-H---HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 48 RIRLTVKADLD-S---ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 48 ~~~~~~~~~~d-~---~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+.+|.+.|.=- . .+|.+.|+.+.|++++. +.+++. ...+|+||||+|||+|. +....+++ +
T Consensus 190 ~~~V~viD~G~k~ni~r~L~~~G~~v~vvp~~~-~~e~i~----------~~~~DGliLsGGPgdp~---~~~~~~~~-I 254 (379)
T 1a9x_B 190 PFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQT-SAEDVL----------KMNPDGIFLSNGPGDPA---PCDYAITA-I 254 (379)
T ss_dssp CEEEEEEESSCCHHHHHHHHHTTEEEEEEETTC-CHHHHH----------TTCCSEEEECCCSBCST---TCHHHHHH-H
T ss_pred CCEEEEEECCChHHHHHHHHHCCCEEEEEeccC-CHHHHh----------hcCCCEEEEeCCCCChH---HHHHHHHH-H
Confidence 35788888621 1 45677799999999884 233211 11469999999999998 55567777 7
Q ss_pred HHhcC-CCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhccc--cCCCcEEEEe-e-cC
Q 007779 124 RSAKG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLMR--ALPPDVIFIA-D-PE 191 (590)
Q Consensus 124 ~~~~~-~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v~--~~p~~l~v~a-~-~~ 191 (590)
+.+.. ++|+|| |||||.|+.++||+|.++ ++++||.++ +++.+.+++||++.|+ ++|+++++++ + +|
T Consensus 255 r~~~~~~~PILGIClG~QLLa~A~GG~v~k~-~~gh~g~n~pv~~~~~g~v~its~~H~~aV~~~~Lp~~~~v~a~s~~D 333 (379)
T 1a9x_B 255 QKFLETDIPVFGICLGHQLLALASGAKTVKM-KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD 333 (379)
T ss_dssp HHHTTSCCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEEEEETTTTEEEEEEEEEEEEECSTTCCTTEEEEEEETTT
T ss_pred HHHHHcCCCEEEECchHHHHHHHhCcEEEec-ccccccCceeeEecCCCcEEEEecCccceEecccCCCCeEEEEEeCCC
Confidence 77655 699999 999999999999999999 899999775 3456777899999996 5999999999 5 78
Q ss_pred CcEEEEEcC----CCCcccCCCc----hhhH-HHHHHHHh
Q 007779 192 GSIMGGGGS----IGPHYSGNDP----REMR-LVGALREV 222 (590)
Q Consensus 192 g~im~~~h~----~gvQfHPEs~----~~m~-L~~~L~kl 222 (590)
|.|||++|+ ||||||||+. .+.. +.+|++.+
T Consensus 334 g~ieai~~~~~pi~gVQFHPE~~~~p~d~~~Lf~~Fl~~~ 373 (379)
T 1a9x_B 334 GTLQGIHRTDKPAFSFQGNPEASPGPHDAAPLFDHFIELI 373 (379)
T ss_dssp CCEEEEEESSSSEEEESSCTTCSSSCSTTTHHHHHHHHHH
T ss_pred CcEEEEEECCCCEEEEEeCCcCCCCcccHHHHHHHHHHHH
Confidence 999999995 9999999982 2334 78888765
|
| >2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-23 Score=204.50 Aligned_cols=157 Identities=13% Similarity=0.063 Sum_probs=125.8
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCC-CCCCCCchhhhhHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPT-QTRPLREDEAFKVLDT 121 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspG-Pg~P~~~~~~g~~~~~ 121 (590)
+++++.|+.|+ ++|+++|.++.+++++. +.++ ++.+|+|||++| |++|.+..+...+.+.
T Consensus 14 ~~i~~id~~~~~~~~~~~~l~~~G~~~~vv~~~~-~~~~------------l~~~DglIl~GG~p~~~~~~~~~~~l~~~ 80 (212)
T 2a9v_A 14 LKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDI-DSSE------------LDGLDGLVLSGGAPNIDEELDKLGSVGKY 80 (212)
T ss_dssp CBEEEEEESCCTTCHHHHHHHHTTCBCCEEETTS-CGGG------------GTTCSEEEEEEECSCGGGTGGGHHHHHHH
T ss_pred ceEEEEeCCCccHHHHHHHHHHCCCEEEEEeCCC-CHHH------------HhCCCEEEECCCCCCCCcccccchhHHHH
Confidence 47899999998 67888899999999875 2322 345799999999 9998754234444555
Q ss_pred HHHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEe
Q 007779 122 ILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA 188 (590)
Q Consensus 122 ~i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a 188 (590)
+. ..++|+|| |+|||.|+.++||+|.+. +.+++|... . ++.+.+..+|++.|+.+|++++++|
T Consensus 81 -~~--~~~~PiLGIC~G~Qll~~~lGg~v~~~-~~~~~G~~~v~~~~~~~l~~~~~~~~~v~~~H~~~v~~l~~~~~vlA 156 (212)
T 2a9v_A 81 -ID--DHNYPILGICVGAQFIALHFGASVVKA-KHPEFGKTKVSVMHSENIFGGLPSEITVWENHNDEIINLPDDFTLAA 156 (212)
T ss_dssp -HH--HCCSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEESCCCGGGTTCCSEEEEEEEEEEEEESCCTTEEEEE
T ss_pred -HH--hCCCCEEEEChHHHHHHHHhCCEEEcC-CCcccCceeeEECCCChhHhcCCCceEEEeEhhhhHhhCCCCcEEEE
Confidence 32 35799999 999999999999999998 778888643 1 2367888999999999999999999
Q ss_pred -ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 189 -DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 189 -~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
++||.|+|++++ +|||||||. +.+.+ +++|++.+
T Consensus 157 ~s~d~~i~ai~~~~~~i~gvQfHPE~~~~~~g~~l~~~F~~~~ 199 (212)
T 2a9v_A 157 SSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGIC 199 (212)
T ss_dssp ECSSCSCSEEEESSSSEEEESSCTTSTTSTTHHHHHHHHHHHH
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCCCCccHHHHHHHHHHHH
Confidence 888999999985 999999997 34555 88888754
|
| >1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=196.26 Aligned_cols=155 Identities=11% Similarity=0.035 Sum_probs=121.1
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|.++|+.|+ ++|++.|.++.++++++ +.++.. -+.+|+|||++|| +|. +.+...++ ++
T Consensus 3 i~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~-~~~~~~----------~~~~dglil~Gg~-~~~---~~~~~~~~-i~ 66 (189)
T 1wl8_A 3 IVIMDNGGQYVHRIWRTLRYLGVETKIIPNTT-PLEEIK----------AMNPKGIIFSGGP-SLE---NTGNCEKV-LE 66 (189)
T ss_dssp EEEEECSCTTHHHHHHHHHHTTCEEEEEETTC-CHHHHH----------HTCCSEEEECCCS-CTT---CCTTHHHH-HH
T ss_pred EEEEECCCchHHHHHHHHHHCCCeEEEEECCC-ChHHhc----------ccCCCEEEECCCC-Chh---hhhhHHHH-HH
Confidence 788888885 67888899999999876 232211 1246999999999 887 56667788 77
Q ss_pred Hh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEe-e
Q 007779 125 SA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA-D 189 (590)
Q Consensus 125 ~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a-~ 189 (590)
.+ ..++|+|| |+|||.|+.++||++.++ +.++||.+. + ++.+.+..+|...+.++|++++++| +
T Consensus 67 ~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~-~~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~h~~~v~~l~~~~~vla~s 145 (189)
T 1wl8_A 67 HYDEFNVPILGICLGHQLIAKFFGGKVGRG-EKAEYSLVEIEIIDEXEIFKGLPKRLKVWESHMDEVKELPPKFKILARS 145 (189)
T ss_dssp TGGGTCSCEEEETHHHHHHHHHHTCEEEEC-SCCSCEEEEEEESCC--CCTTSCSEEEEEECCSEEEEECCTTEEEEEEE
T ss_pred HHhhCCCeEEEEcHHHHHHHHHhCCceecC-CCcccCceeEEEecCchHHhCCCCceEEEEEeeeehhhCCCCcEEEEEc
Confidence 76 67899999 999999999999999998 788899754 1 1246664444445568999999999 8
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
+||.++|++|+ +|||||||+ +.+.. +++|++..
T Consensus 146 ~~g~i~a~~~~~~~~~gvQfHPE~~~~~~g~~l~~~f~~~~ 186 (189)
T 1wl8_A 146 ETCPIEAMKHEELPIYGVQFHPEVAHTEKGEEILRNFAKLC 186 (189)
T ss_dssp SSCSCSEEEESSSCEEEESSCTTSTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCceEEEEecCCCcCCCcchHHHHHHHHHHH
Confidence 88999999986 899999996 44555 88888654
|
| >2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-21 Score=192.86 Aligned_cols=160 Identities=6% Similarity=-0.045 Sum_probs=114.5
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.+|.++|+-|+ ++++++|.++.+++.+.- .++.. .+.+|+|||++||+.|.+.+... ..+.
T Consensus 25 ~~I~iiD~g~~~~~~i~~~l~~~G~~~~vv~~~~~-~~~l~----------~~~~dglil~Gg~~~~~~~~~~~-~~~~- 91 (218)
T 2vpi_A 25 GAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP-AFAIK----------EQGFRAIIISGGPNSVYAEDAPW-FDPA- 91 (218)
T ss_dssp TCEEEEECSTTTTHHHHHHHHHTTCCEEEECTTCC-HHHHH----------HHTCSEEEEEC---------CCC-CCGG-
T ss_pred CeEEEEECCCchHHHHHHHHHHCCCEEEEEECCCC-hHHHh----------hcCCCEEEECCCCcccccccchh-HHHH-
Confidence 36888888876 678888999999988742 22211 13479999999999886322222 2222
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEee
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIAD 189 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a~ 189 (590)
+ +..++|+|| |+|||+|+.++||+|.+. +.+++|... . ++.+.+..||++.|+.+|++++++|.
T Consensus 92 ~--~~~~~PilGIC~G~Qll~~~~GG~v~~~-~~~~~G~~~v~~~~~~~l~~~l~~~~~v~~~H~~~v~~l~~~~~vlA~ 168 (218)
T 2vpi_A 92 I--FTIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVAR 168 (218)
T ss_dssp G--GTSSCCEEEETHHHHHHHHHTTCCEEEE-EECSCEEEEEEECTTSGGGTTCCSEEEEEECSEEEESSCCTTCEEEEE
T ss_pred H--HHcCCCEEEEcHHHHHHHHHhCCceEeC-CCCcccEEEEEEccCChhHhcCCCCcEEeehhhhHhhhcCCCCEEEEE
Confidence 1 234799999 999999999999999998 777888643 1 23688899999999999999999993
Q ss_pred cCCcEEEEEcC----CCCcccCCC---chhhH-HHHHH-HHhhc
Q 007779 190 PEGSIMGGGGS----IGPHYSGND---PREMR-LVGAL-REVLA 224 (590)
Q Consensus 190 ~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L-~kl~~ 224 (590)
.|+.|+|++|+ +|||||||. +.+.+ +++|+ +....
T Consensus 169 s~~~i~ai~~~~~~i~gvQfHPE~~~~~~g~~l~~~F~~~~~~~ 212 (218)
T 2vpi_A 169 SGNIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGC 212 (218)
T ss_dssp ETTEEEEEEETTTTEEEESSCTTSTTSTTHHHHHHHHHTTTTCC
T ss_pred cCCeEEEEEECCCCEEEEEcCCCCCCChhHHHHHHHHHHHHhCC
Confidence 37899999975 999999997 44666 88888 44433
|
| >4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-22 Score=195.91 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=103.8
Q ss_pred eeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHH---
Q 007779 50 RLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLD--- 120 (590)
Q Consensus 50 ~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~--- 120 (590)
+|.++| |+.| +.|+++|++++|+|+++ + ++..|+||| ||||.|. ++...++
T Consensus 4 ~I~iiD~g~~n~~si~~al~~~G~~~~v~~~~~----~------------l~~~D~lil-PG~g~~~---~~~~~~~~~~ 63 (211)
T 4gud_A 4 NVVIIDTGCANISSVKFAIERLGYAVTISRDPQ----V------------VLAADKLFL-PGVGTAS---EAMKNLTERD 63 (211)
T ss_dssp CEEEECCCCTTHHHHHHHHHHTTCCEEEECCHH----H------------HHHCSEEEE-CCCSCHH---HHHHHHHHTT
T ss_pred EEEEEECCCChHHHHHHHHHHCCCEEEEECCHH----H------------HhCCCEEEE-CCCCCHH---HHHHHHHhcC
Confidence 578888 8888 88999999999987642 1 334589999 8999997 5543322
Q ss_pred HHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcc---------------------cc-----------C--C
Q 007779 121 TILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQ---------------------WS-----------E--G 164 (590)
Q Consensus 121 ~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~---------------------~s-----------~--~ 164 (590)
+ ++. ...++|+|| |||||+|+.++|+.+.++ ....||. ++ . .
T Consensus 64 ~-i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~-~~~~~gl~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 141 (211)
T 4gud_A 64 L-IELVKRVEKPLLGICLGMQLLGKLSEEKGQKA-DEIVQCLGLVDGEVRLLQTGDLPLPHMGWNTVQVKEGHPLFNGIE 141 (211)
T ss_dssp C-HHHHHHCCSCEEEETHHHHTTSSEECCC-----CCCEECCCSSSCEEEECCCTTSCSSEEEEECCEECTTCGGGTTCC
T ss_pred h-HHHHHHcCCCEEEEchhHhHHHHHhCCccccc-CCccccceeccceEEEcccCCcceeeccceeeeeeccChhhcCCC
Confidence 2 222 235799999 999999999999999887 5655541 11 0 1
Q ss_pred ceeEEeccchhccccCCCcEEEEe-ecCCcEE--EEEcC--CCCcccCCC--chhhH-HHHHHHHhhcCCC
Q 007779 165 ERRAMNTFWPLLMRALPPDVIFIA-DPEGSIM--GGGGS--IGPHYSGND--PREMR-LVGALREVLAGGH 227 (590)
Q Consensus 165 ~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im--~~~h~--~gvQfHPEs--~~~m~-L~~~L~kl~~G~~ 227 (590)
..+.+.+|||+.| |++..++| +++|..+ ++++. ||||||||+ +.|++ |+|||+- .|++
T Consensus 142 ~~~~~~~~H~~~v---~~~~~~~a~~~~g~~~~~~v~~~~v~GvQFHPE~s~~~G~~ll~nFl~~--~ge~ 207 (211)
T 4gud_A 142 PDAYFYFVHSFAM---PVGDYTIAQCEYGQPFSAAIQAGNYYGVQFHPERSSKAGARLIQNFLEL--RGEN 207 (211)
T ss_dssp TTCCEEEEESEEC---CCCTTEEEEEESSSEEEEEEEETTEEEESSCGGGSHHHHHHHHHHHHHC------
T ss_pred CCcEEEEEeeEEe---CCCCeEEEEecCCCeEEEEEeCCCEEEEEccCEecCccHHHHHHHHHHH--hccc
Confidence 2466788999876 45556777 7777644 45554 999999997 66777 9999963 4544
|
| >1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-21 Score=191.81 Aligned_cols=148 Identities=11% Similarity=0.013 Sum_probs=113.6
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHHHHHHHHh-cCCCCccc-
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVLDTILRSA-KGDLKDEE- 134 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~~-~~~~PilG- 134 (590)
+++++.|.++.+++++.. +. ++. .++.+|+|||++||++|.+++.. ....++ |+.+ ..++|+||
T Consensus 31 ~~l~~~G~~v~v~~~~~~--~~----~~~----~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~-i~~~~~~~~PiLGI 99 (239)
T 1o1y_A 31 DIFREKNWSFDYLDTPKG--EK----LER----PLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQL-IEEILKKEIPFLGI 99 (239)
T ss_dssp HHHHHTTCEEEEECGGGT--CC----CSS----CGGGCSEEEECCCSCCTTCTTTCTHHHHHHHH-HHHHHHHTCCEEEE
T ss_pred HHHHhCCCcEEEeCCcCc--cc----ccc----chhcCCEEEECCCCccccCCccChhHHHHHHH-HHHHHHCCCCEEEE
Confidence 788899999999988642 11 111 15577999999999988643212 245666 6664 45799999
Q ss_pred ccchHHHHhHhCceeeccCCC-CcCcccc----C--------CceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC
Q 007779 135 EVSKAQLGAFFSAMTIRANAF-PEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS 200 (590)
Q Consensus 135 CLGhQ~i~~~~G~~v~~~~~~-~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~ 200 (590)
|+|||.|+.++||+|.+. +. +++|... . ++.+.+.+||++.+ .+|++++++| ++|+.+||++++
T Consensus 100 C~G~QlL~~alGG~v~~~-~~g~~~G~~~v~~~~~~~l~~~~~~~~~~~~~H~~~v-~lp~~~~vlA~s~~~~iea~~~~ 177 (239)
T 1o1y_A 100 CLGSQMLAKVLGASVYRG-KNGEEIGWYFVEKVSDNKFFREFPDRLRVFQWHGDTF-DLPRRATRVFTSEKYENQGFVYG 177 (239)
T ss_dssp THHHHHHHHHTTCCEEEC-TTCCEEEEEEEEECCCCGGGTTSCSEEEEEEEESEEE-CCCTTCEEEEECSSCSCSEEEET
T ss_pred chhHHHHHHHcCCeEecC-CCCCccccEEEEECCCCchHHhCCCCceeEeecCCcc-ccCCCCEEEEEcCCCCEEEEEEC
Confidence 999999999999999998 66 6555331 1 23688999999998 7899999999 788899999998
Q ss_pred --CCCcccCCCchhhHHHHHHHH
Q 007779 201 --IGPHYSGNDPREMRLVGALRE 221 (590)
Q Consensus 201 --~gvQfHPEs~~~m~L~~~L~k 221 (590)
||||||||+... .+++|++.
T Consensus 178 ~i~gvQfHPE~~~~-~~~~~~~~ 199 (239)
T 1o1y_A 178 KAVGLQFHIEVGAR-TMKRWIEA 199 (239)
T ss_dssp TEEEESSBSSCCHH-HHHHHHHH
T ss_pred CEEEEEeCccCCHH-HHHHHHHH
Confidence 999999999554 36666643
|
| >3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=213.90 Aligned_cols=170 Identities=4% Similarity=-0.090 Sum_probs=129.7
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.+|+++|+=++ ..++++|..+.+++++ .+.+++. . ..+|+||||+||++|.+++......++
T Consensus 8 ~~IlilD~Gs~~~~~I~r~lre~Gv~~eiv~~~-~~~~~i~----~------~~~dgIIlsGGp~s~~~~~~~~~~~~l- 75 (556)
T 3uow_A 8 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYG-VELKDIK----D------MNIKGVILSGGPYSVTEAGSPHLKKEV- 75 (556)
T ss_dssp CEEEEEESSCTTHHHHHHHHHHTTCCEEEEETT-CCGGGTT----T------SCEEEEEECCCSCCTTSTTCCCCCHHH-
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCeEEEEECC-CCHHHHh----h------cCCCEEEECCCCCcccccCCcchhHHH-
Confidence 37899998776 6788999999999987 3344321 1 156899999999999754333333444
Q ss_pred HHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------C-------------------------------
Q 007779 123 LRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------E------------------------------- 163 (590)
Q Consensus 123 i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~------------------------------- 163 (590)
++.+ ..++|+|| |+|||.|+.+|||+|.+. +..+||... .
T Consensus 76 ~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~-~~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~~~mg~~~n~~~~~~~~ 154 (556)
T 3uow_A 76 FEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS-KTSEYGCTDVNILRNDNINNITYCRNFGDSSSAMDLYSNYKLMNETC 154 (556)
T ss_dssp HHHHHHTTCCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEECCTTGGGGCSGGGGC---CCHHHHHTTSCCCC--C
T ss_pred HHHhhhcCCCEEEECHHHHHHHHHhCCcEecC-CCcccCCcceeeccCcccccccceecccccccccccccccccccccc
Confidence 6553 34799999 999999999999999987 555666432 1
Q ss_pred -------CceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhh-cCC
Q 007779 164 -------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVL-AGG 226 (590)
Q Consensus 164 -------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~-~G~ 226 (590)
++.+.++.+|++.|..+|++++++| ++++.|+|++|+ ||||||||. +.|.+ |++|+..+. ..+
T Consensus 155 ~Lf~gl~~~~~~v~~~H~d~V~~lp~g~~vlA~s~~~~i~ai~~~~~~i~GvQFHPE~~~~~~G~~ll~nFl~~i~g~~~ 234 (556)
T 3uow_A 155 CLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKK 234 (556)
T ss_dssp GGGTTCCSSEEEEEEEEEEEEEECCTTCEEEEEETTEEEEEEEETTTTEEEESSCTTSTTSTTHHHHHHHHHTTTTCCCC
T ss_pred hhhcccccCceEEEEEccceeeccCCCcEEEEEeCCCCEEEEEECCCCEEEEEcCCCCCccccchHHHHHHHHHhhcccc
Confidence 2368899999999999999999999 888999999994 999999998 56777 999996653 234
Q ss_pred CCCHH
Q 007779 227 HLGYE 231 (590)
Q Consensus 227 ~Lt~e 231 (590)
+.+.+
T Consensus 235 ~~~~~ 239 (556)
T 3uow_A 235 QFDPI 239 (556)
T ss_dssp -CCHH
T ss_pred ccccc
Confidence 66643
|
| >3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=192.72 Aligned_cols=147 Identities=8% Similarity=-0.028 Sum_probs=114.2
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhhhhHHHHHHHH-hcCCCCccc-cc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEAFKVLDTILRS-AKGDLKDEE-EV 136 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~g~~~~~~i~~-~~~~~PilG-CL 136 (590)
+++++.|.+++|++.+.-+. .+. .++.+|+|||++||++|.+. .......++ |+. +..++|+|| |+
T Consensus 22 ~~l~~~G~~v~v~~~~~~~~------~p~----~~~~~d~lIl~GGp~~~~d~~~~~~~~~~~-i~~~~~~~~PvlGIC~ 90 (250)
T 3m3p_A 22 DFLAGEHIPFQVLRMDRSDP------LPA----EIRDCSGLAMMGGPMSANDDLPWMPTLLAL-IRDAVAQRVPVIGHCL 90 (250)
T ss_dssp HHHHHTTCCEEEEEGGGTCC------CCS----CGGGSSEEEECCCSSCTTSCCTTHHHHHHH-HHHHHHHTCCEEEETH
T ss_pred HHHHHCCCeEEEEeccCCCc------CcC----ccccCCEEEECCCCCcccccchHHHHHHHH-HHHHHHcCCCEEEECH
Confidence 78999999999999764221 111 15567999999999998642 122345566 665 455799999 99
Q ss_pred chHHHHhHhCceeeccCCCCcCcccc-----C---------CceeEEeccchhccccCCCcEEEEe-ecCCcEEEEEcC-
Q 007779 137 SKAQLGAFFSAMTIRANAFPEATQWS-----E---------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIMGGGGS- 200 (590)
Q Consensus 137 GhQ~i~~~~G~~v~~~~~~~~hG~~s-----~---------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im~~~h~- 200 (590)
|+|.|+.++||+|.+. +.+++|... + .+.+.+.+||++.| ++|++++++| ++++.+||++++
T Consensus 91 G~Qll~~~lGG~V~~~-~~~e~G~~~v~~~~~~~~~~l~g~~~~~~v~~~H~~~v-~lp~~~~vlA~s~~~~~~a~~~~~ 168 (250)
T 3m3p_A 91 GGQLLAKAMGGEVTDS-PHAEIGWVRAWPQHVPQALEWLGTWDELELFEWHYQTF-SIPPGAVHILRSEHCANQAYVLDD 168 (250)
T ss_dssp HHHHHHHHTTCCEEEE-EEEEEEEEEEEECSSHHHHHHHSCSSCEEEEEEEEEEE-CCCTTEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHHHhCCEEEeC-CCCceeeEEEEEecCCCCcccccCCCccEEEEEcccee-ecCCCCEEEEEeCCCCEEEEEECC
Confidence 9999999999999999 778888653 1 24689999999999 8999999999 888999999997
Q ss_pred --CCCcccCCCchhhHHHHHHH
Q 007779 201 --IGPHYSGNDPREMRLVGALR 220 (590)
Q Consensus 201 --~gvQfHPEs~~~m~L~~~L~ 220 (590)
||||||||....+ +..+|+
T Consensus 169 ~~~GvQfHPE~~~~~-~~~~l~ 189 (250)
T 3m3p_A 169 LHIGFQCHIEMQAHM-VREWCS 189 (250)
T ss_dssp TEEEESSCTTCCHHH-HHHHHH
T ss_pred eeEEEEeCCcCCHHH-HHHHHH
Confidence 9999999985433 334443
|
| >3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=188.36 Aligned_cols=148 Identities=12% Similarity=0.016 Sum_probs=113.6
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhh-----hhHHHHHHHH-hcCCCCc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEA-----FKVLDTILRS-AKGDLKD 132 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~-----g~~~~~~i~~-~~~~~Pi 132 (590)
.++++.|.++++++.++-+. ++. .++.+|+|||++||++|.+. ++. ....++ |+. +..++|+
T Consensus 19 ~~l~~~g~~~~~~~~~~~~~------~p~----~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~Pv 87 (236)
T 3l7n_A 19 AWAALRGHDVSMTKVYRYEK------LPK----DIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKL-IQKAAKSEKII 87 (236)
T ss_dssp HHHHHTTCEEEEEEGGGTCC------CCS----CGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHH-HHHHHHTTCEE
T ss_pred HHHHHCCCeEEEEeeeCCCC------CCC----CccccCEEEECCCCCCcccccccCcccchHHHHHH-HHHHHHcCCCE
Confidence 67888899999998753210 111 15578999999999999632 221 225677 665 5668999
Q ss_pred cc-ccchHHHHhHhCceeeccCCCCcCcccc----C-----------CceeEEeccchhccccCCCcEEEEe-ecCCcEE
Q 007779 133 EE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E-----------GERRAMNTFWPLLMRALPPDVIFIA-DPEGSIM 195 (590)
Q Consensus 133 lG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~-----------~~~~~~~ryHsl~v~~~p~~l~v~a-~~~g~im 195 (590)
|| |+|||.|+.++||+|.+. +.+++|... . ++.+.+.+||+.. ..+|++++++| ++++.++
T Consensus 88 LGIClG~QlL~~~~Gg~v~~~-~~~~~G~~~v~~~~~~~~~~l~~~~~~~~~v~~~H~~~-~~lp~~~~vla~s~~~~~~ 165 (236)
T 3l7n_A 88 VGVCLGAQLMGVAYGADYLHS-PKKEIGNYLISLTEAGKMDSYLSDFSDDLLVGHWHGDM-PGLPDKAQVLAISQGCPRQ 165 (236)
T ss_dssp EEETHHHHHHHHHTTCCCEEE-EEEEEEEEEEEECTTGGGCGGGTTSCSEEEEEEEEEEE-CCCCTTCEEEEECSSCSCS
T ss_pred EEEchHHHHHHHHhCCEEecC-CCceeeeEEEEEccCcccChHHhcCCCCcEEEEecCCc-ccCCChheEEEECCCCCEE
Confidence 99 999999999999999998 778888653 1 1368999999986 68899999999 8888899
Q ss_pred EEEcC---CCCcccCCCchhhHHHHHHHH
Q 007779 196 GGGGS---IGPHYSGNDPREMRLVGALRE 221 (590)
Q Consensus 196 ~~~h~---~gvQfHPEs~~~m~L~~~L~k 221 (590)
|++++ ||||||||.... .+++|++.
T Consensus 166 a~~~~~~v~gvQfHPE~~~~-~~~~~~~~ 193 (236)
T 3l7n_A 166 IIKFGPKQYAFQCHLEFTPE-LVAALIAQ 193 (236)
T ss_dssp EEEEETTEEEESSBSSCCHH-HHHHHHHH
T ss_pred EEEECCCEEEEEeCCCCCHH-HHHHHHHh
Confidence 99986 999999999632 25666654
|
| >3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.6e-21 Score=210.50 Aligned_cols=164 Identities=9% Similarity=-0.007 Sum_probs=118.1
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.+|+++|.=|+ ..++++|..+.+++++. +.+++. . + .+|+||||+||+++.+ .+. ...
T Consensus 11 ~~I~IlD~g~~~~~~i~r~lr~~Gv~~~i~p~~~-~~~~i~----~-----~-~~dgIILsGGp~sv~~---~~~-~~~- 74 (527)
T 3tqi_A 11 HRILILDFGSQYAQLIARRVREIGVYCELMPCDI-DEETIR----D-----F-NPHGIILSGGPETVTL---SHT-LRA- 74 (527)
T ss_dssp SEEEEEECSCTTHHHHHHHHHHHTCEEEEEETTC-CSSSST----T-----T-CCSEEEECCCCC-------------C-
T ss_pred CeEEEEECCCccHHHHHHHHHHCCCeEEEEECCC-CHHHHH----h-----c-CCCEEEECCcCccccc---CCC-hhh-
Confidence 36899988776 57888999999998863 232211 1 1 4599999999999873 221 122
Q ss_pred HHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C------C--c--------eeEEeccchhccccC
Q 007779 123 LRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E------G--E--------RRAMNTFWPLLMRAL 180 (590)
Q Consensus 123 i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~------~--~--------~~~~~ryHsl~v~~~ 180 (590)
.+. +..++|+|| |+|||.|+.++||+|.+. +.+++|... + + . .+.++.+|++.|..+
T Consensus 75 ~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~-~~~e~G~~~v~~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~~l 153 (527)
T 3tqi_A 75 PAFIFEIGCPVLGICYGMQTMAYQLGGKVNRT-AKAEFGHAQLRVLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVSEL 153 (527)
T ss_dssp CCSTTTSSSCEEEETHHHHHHHHHSSSCBC------CEEEEEEEESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBCSC
T ss_pred HHHHHhcCCCEEEEChHHHHHHHHcCCeEEeC-CCccccceEEEEcCCChhhcCCccccccccccceEEEEEcccchhcc
Confidence 222 345799999 999999999999999999 788888663 1 1 1 578999999999999
Q ss_pred CCcEEEEe-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhcC-CCCC
Q 007779 181 PPDVIFIA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLAG-GHLG 229 (590)
Q Consensus 181 p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~G-~~Lt 229 (590)
|++++++| ++++.|+|++|+ ||||||||. +.|.+ |++|+..+..- ++-+
T Consensus 154 p~g~~v~A~s~~~~i~ai~~~~~~~~GvQFHPE~~~t~~G~~ll~nF~~~i~~~~~~w~ 212 (527)
T 3tqi_A 154 PPGFEATACTDNSPLAAMADFKRRFFGLQFHPEVTHTPQGHRILAHFVIHICQCIPNWT 212 (527)
T ss_dssp CTTCEEEEEETTEEEEEEECSSSCEEEESBCSSSTTSTTHHHHHHHHHHTTSCCCCCCC
T ss_pred CCCCEEEEEeCCCcEEEEEcCCCCEEEEEeccccccccccchhhhhhhhhcccccchhh
Confidence 99999999 888999999985 999999998 56777 99999776433 3444
|
| >2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-21 Score=182.03 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=109.4
Q ss_pred eeEeeccccH-----HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchh-hhhHHHHHH
Q 007779 50 RLTVKADLDS-----ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDE-AFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~-----~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~-~g~~~~~~i 123 (590)
+|.++|+-|+ .+++++|.++.++++++ + ++.+|+|||++||++|.+... .-...+. +
T Consensus 2 ~i~vl~~~g~~~~~~~~l~~~G~~~~~~~~~~----~------------~~~~dglil~GG~~~~~~~~~~~~~~~~~-i 64 (186)
T 2ywj_A 2 IIGVLAIQGDVEEHEEAIKKAGYEAKKVKRVE----D------------LEGIDALIIPGGESTAIGKLMKKYGLLEK-I 64 (186)
T ss_dssp EEEEECSSSCCHHHHHHHHHTTSEEEEECSGG----G------------GTTCSEEEECCSCHHHHHHHHHHTTHHHH-H
T ss_pred EEEEEecCcchHHHHHHHHHCCCEEEEECChH----H------------hccCCEEEECCCCchhhhhhhhccCHHHH-H
Confidence 4555554343 67888899999987632 1 345699999999987642110 1123455 5
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----------------CC-ceeEEeccchhccccC-CCc
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----------------EG-ERRAMNTFWPLLMRAL-PPD 183 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----------------~~-~~~~~~ryHsl~v~~~-p~~ 183 (590)
+ ..++|+|| |+|||.|+.++||++..+ . ..+|.+. .+ ..+.+.+||++.|+.+ |++
T Consensus 65 ~--~~~~PilGIC~G~Qll~~~~gg~~~~l-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~v~~l~~~~ 140 (186)
T 2ywj_A 65 K--NSNLPILGTCAGMVLLSKGTGINQILL-E-LMDITVKRNAYGRQVDSFEKEIEFKDLGKVYGVFIRAPVVDKILSDD 140 (186)
T ss_dssp H--TCCCCEEEETHHHHHHSSCCSSCCCCC-C-CSSEEEETTTTCSSSCCEEEEEEETTTEEEEEEESSCCEEEEECCTT
T ss_pred H--hcCCcEEEECHHHHHHHHHhCCCcCcc-C-CCceeEEeccCCCcccceecccccccCCcEEEEEEecceeeecCCCC
Confidence 5 56799999 999999999999986543 2 1222221 11 3578899999999988 999
Q ss_pred EEEEe-ecCCcEEEEEcC--CCCcccCCC-chhhH-HHHHHHHh
Q 007779 184 VIFIA-DPEGSIMGGGGS--IGPHYSGND-PREMR-LVGALREV 222 (590)
Q Consensus 184 l~v~a-~~~g~im~~~h~--~gvQfHPEs-~~~m~-L~~~L~kl 222 (590)
++++| + |+.+||++|+ ||||||||- ..+.. +++|++..
T Consensus 141 ~~v~a~s-d~~~~a~~~~~~~gvQfHPE~~~~g~~l~~~F~~~~ 183 (186)
T 2ywj_A 141 VEVIARD-GDKIVGVKQGKYMALSFHPELSEDGYKVYKYFVENC 183 (186)
T ss_dssp CEEEEEE-TTEEEEEEETTEEEESSCGGGSTTHHHHHHHHHHHH
T ss_pred eEEEEEE-CCEEEEEeeCCEEEEECCCCcCCchhHHHHHHHHHH
Confidence 99999 6 8999999998 999999996 44555 78888764
|
| >2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=205.73 Aligned_cols=164 Identities=13% Similarity=-0.028 Sum_probs=122.7
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
|+++|.=|+ ..++++|..+.++++|. +.+++.. + .+|+||||+||+++.++. +..+.+.
T Consensus 2 i~ilD~g~~~~~~i~r~l~~~G~~~~i~p~~~-~~~~i~~---------~-~~dgiIlsGGp~s~~~~~-~~~~~~~--- 66 (503)
T 2ywb_A 2 VLVLDFGSQYTRLIARRLRELRAFSLILPGDA-PLEEVLK---------H-RPQALILSGGPRSVFDPD-APRPDPR--- 66 (503)
T ss_dssp EEEEESSCTTHHHHHHHHHTTTCCEEEEETTC-CHHHHHT---------T-CCSEEEECCCSSCSSCTT-CCCCCGG---
T ss_pred EEEEECCCcHHHHHHHHHHHCCCEEEEEECCC-CHHHHHh---------c-CCCEEEECCCCchhccCC-CcchHHH---
Confidence 566666664 56788999999999873 3333211 1 359999999999987432 2222122
Q ss_pred HhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc---------CC--ceeEEeccchhccccCCCcEEEEe-ecC
Q 007779 125 SAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS---------EG--ERRAMNTFWPLLMRALPPDVIFIA-DPE 191 (590)
Q Consensus 125 ~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s---------~~--~~~~~~ryHsl~v~~~p~~l~v~a-~~~ 191 (590)
.+..++|+|| |+|||.|+.++||+|.+. +.+++|... .+ +.+.++.+|++.|..+|++++++| +++
T Consensus 67 ~~~~~~PvLGIC~G~Qlla~~~GG~v~~~-~~~e~G~~~v~~~~~~l~~~~~~~~~v~~~H~~~v~~lp~g~~v~A~s~~ 145 (503)
T 2ywb_A 67 LFSSGLPLLGICYGMQLLAQELGGRVERA-GRAEYGKALLTRHEGPLFRGLEGEVQVWMSHQDAVTAPPPGWRVVAETEE 145 (503)
T ss_dssp GGCSSCCEEEETHHHHHHHHTTTCEEECC----CEEEEECSEECSGGGTTCCSCCEEEEECSCEEEECCTTCEEEEECSS
T ss_pred HHhCCCCEEEECHHHHHHHHHhCCeEeeC-CCCccceEEEEecCcHHhhcCCCccEEEEECCCccccCCCCCEEEEEECC
Confidence 1335799999 999999999999999998 777888653 12 367899999999999999999999 888
Q ss_pred CcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhcCCCCCH
Q 007779 192 GSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLAGGHLGY 230 (590)
Q Consensus 192 g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~G~~Lt~ 230 (590)
+.|+|++|+ ||||||||. +.|.+ +++|++.....++.+.
T Consensus 146 ~~i~ai~~~~~~~~gvQFHPE~~~~~~g~~ll~~F~~~~~~~~~~~~ 192 (503)
T 2ywb_A 146 NPVAAIASPDGRAYGVQFHPEVAHTPKGMQILENFLELAGVKRDWTP 192 (503)
T ss_dssp CSCSEEECTTSSEEEESBCTTSTTSTTHHHHHHHHHHHTTCCCCCCH
T ss_pred CCEEEEEeCCCCEEEEecCCCcccccccHHHHHHHHHHhhhhccccc
Confidence 999999995 999999998 45676 9999955555556664
|
| >1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=207.63 Aligned_cols=168 Identities=9% Similarity=-0.013 Sum_probs=127.1
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
.+|.++|.=++ ..++++|..+.++++|. +.+++.. + .+|+||||+||+++.++. +..+.+.
T Consensus 8 ~~IlIlD~g~~~~~~i~r~lr~~G~~~~i~p~~~-~~~~i~~---------~-~~dgiILsGGp~s~~~~~-~~~~~~~- 74 (525)
T 1gpm_A 8 HRILILDFGSQYTQLVARRVRELGVYCELWAWDV-TEAQIRD---------F-NPSGIILSGGPESTTEEN-SPRAPQY- 74 (525)
T ss_dssp SEEEEEECSCTTHHHHHHHHHHTTCEEEEEESCC-CHHHHHH---------H-CCSEEEECCCSSCTTSTT-CCCCCGG-
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCEEEEEECCC-CHHHHhc---------c-CCCEEEECCcCccccccC-CcchHHH-
Confidence 46788886664 56788899999999874 2332110 2 469999999999987432 2222222
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----------C--Cc--------eeEEeccchhccccCC
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----------E--GE--------RRAMNTFWPLLMRALP 181 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------~--~~--------~~~~~ryHsl~v~~~p 181 (590)
.+..++|+|| |+|||.|+.++||+|.+. +.+++|... . +. .+.++.+|++.|..+|
T Consensus 75 --~~~~g~PvLGIC~G~Qlla~~~GG~V~~~-~~~e~G~~~v~~~~~~~L~~~l~~~~~~~~~~~~~v~~~H~~~V~~lp 151 (525)
T 1gpm_A 75 --VFEAGVPVFGVCYGMQTMAMQLGGHVEAS-NEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIP 151 (525)
T ss_dssp --GGTSSSCEEEETHHHHHHHHHHTCEEECC-SSCEEEEEEEEECSCCTTTTTCCSEECTTSCEEEEEEEEECSEEEECC
T ss_pred --HHHCCCCEEEEChHHHHHHHHcCCEEEeC-CCcccceEEEEeCCCCHhhccCccccccccccceEEEEEccceeeeCC
Confidence 1234799999 999999999999999999 778888653 1 12 5789999999999999
Q ss_pred CcEEEEe-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhc-CCCCCHHH
Q 007779 182 PDVIFIA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLA-GGHLGYEE 232 (590)
Q Consensus 182 ~~l~v~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~-G~~Lt~eE 232 (590)
++++++| ++++.|+|++|+ ||||||||. +.|.+ |++|+..+.. .++.|.++
T Consensus 152 ~g~~v~A~s~~~~i~ai~~~~~~i~gvQFHPE~~~~~~g~~ll~nF~~~i~~~~~~~~~~~ 212 (525)
T 1gpm_A 152 SDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAK 212 (525)
T ss_dssp TTCEEEEECSSCSCSEEEETTTTEEEESBCTTSTTSTTHHHHHHHHHHTTSCCCCCCCHHH
T ss_pred CCCEEEEECCCCCEEEEEECCCCEEEEecCCCCCcchhHHHHHHHHHHhhhhccccchHHH
Confidence 9999999 888999999985 999999998 45676 9999976643 34566543
|
| >1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=182.87 Aligned_cols=149 Identities=7% Similarity=0.047 Sum_probs=110.4
Q ss_pred ceeEeec----cccH--HHHHHhC-----CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhh-
Q 007779 49 IRLTVKA----DLDS--ALIDQLG-----LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAF- 116 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg-----~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g- 116 (590)
++|.++| |+|| .+|+++| +++.++++++- +.+|+||| ||||+|.+ +..
T Consensus 1 m~I~iid~~~g~~~s~~~~l~~~G~~~~~~~~~~~~~~~~-----------------~~~dglil-pG~g~~~~--~~~~ 60 (201)
T 1gpw_B 1 MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPRN-----------------DLYDLLFI-PGVGHFGE--GMRR 60 (201)
T ss_dssp CEEEEECCSSSCCHHHHHHHHHHSTTBSSCEEEEECSCCS-----------------SCCSEEEE-CCCSCSHH--HHHH
T ss_pred CEEEEEecCCchHHHHHHHHHHcCCCCCceEEEEECCCcc-----------------cCCCEEEE-CCCCcHHH--HHHH
Confidence 3678888 9998 8899999 89999987530 13489999 99999862 111
Q ss_pred ----hHHHHHHHHh-cCCCCccc-ccchHHHHhHhC------------ceeeccCC---CCcCcccc-----CC-ceeEE
Q 007779 117 ----KVLDTILRSA-KGDLKDEE-EVSKAQLGAFFS------------AMTIRANA---FPEATQWS-----EG-ERRAM 169 (590)
Q Consensus 117 ----~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G------------~~v~~~~~---~~~hG~~s-----~~-~~~~~ 169 (590)
...++ |+++ ..++|+|| |+|||.|+.++| ++|.+. + .++.| |+ .+ +.+.+
T Consensus 61 l~~~~~~~~-i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~~~g~v~~~-~~~~~~~~g-~~~l~~~~~~~~~~v 137 (201)
T 1gpw_B 61 LRENDLIDF-VRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKL-RSRRLPHMG-WNEVIFKDTFPNGYY 137 (201)
T ss_dssp HHHTTCHHH-HHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCSSSEEEEEC-CCSSCSEEE-EEEEEESSSSCCEEE
T ss_pred HHhhCHHHH-HHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcceeeeEEEEc-CCCCCCccc-ceeeEeccCCCCCeE
Confidence 14566 6655 56799999 999999999996 566655 2 12223 22 12 46889
Q ss_pred eccchhccccCCCcEEEEe-ecC-C-cEEEEEcC---CCCcccCCC--chhhH-HHHHHHHh
Q 007779 170 NTFWPLLMRALPPDVIFIA-DPE-G-SIMGGGGS---IGPHYSGND--PREMR-LVGALREV 222 (590)
Q Consensus 170 ~ryHsl~v~~~p~~l~v~a-~~~-g-~im~~~h~---~gvQfHPEs--~~~m~-L~~~L~kl 222 (590)
.+||++.|+.+ .++++| +++ | .++|++|+ ||||||||+ +.+.+ +++|++.+
T Consensus 138 ~~~H~~~v~~~--~~~vla~s~~~g~~~~a~~~~~~i~gvQfHPE~~~~~~~~l~~~f~~~~ 197 (201)
T 1gpw_B 138 YFVHTYRAVCE--EEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEKSSKIGRKLLEKVIECS 197 (201)
T ss_dssp EEEESEEEEEC--GGGEEEEEEETTEEEEEEEEETTEEEESSCGGGSHHHHHHHHHHHHHHS
T ss_pred EEECcceeccC--CCEEEEEEccCCceEEEEEECCCEEEEECCCcccCHhHHHHHHHHHHHh
Confidence 99999999765 578888 665 6 79999987 999999998 44555 88888764
|
| >2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-20 Score=210.90 Aligned_cols=166 Identities=7% Similarity=-0.026 Sum_probs=114.9
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
+|.++|.=++ ..++++|+.+.++++|. +.+++. ...+|+||||+||++|.++ ++..+.+. +
T Consensus 31 ~I~VLDfg~q~~~liar~lre~Gv~~~ivp~~~-~~e~i~----------~~~~dGIILsGGp~s~~~~-~~~~~~~~-i 97 (697)
T 2vxo_A 31 AVVILDAGAQYGKVIDRRVRELFVQSEIFPLET-PAFAIK----------EQGFRAIIISGGPNSVYAE-DAPWFDPA-I 97 (697)
T ss_dssp CEEEEEEC--CHHHHHHHHHHTTCCEEEEETTC-CHHHHH----------HHTCSEEEEEECC--------CCCCCGG-G
T ss_pred EEEEEECCCchHHHHHHHHHHCCCEEEEEECCC-CHHHHh----------hcCCCEEEECCCCCcccCc-cchhHHHH-H
Confidence 6888887765 56889999999999985 233211 1357999999999998632 23322232 1
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEeec
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
+..++|+|| |+|||.|+.++||+|.++ +..+||... + ++.+.++.+|++.|+.+|++++++|..
T Consensus 98 --~~~g~PvLGIC~G~QlLa~~lGG~v~~~-~~~e~G~~~v~~~~~~~Lf~~l~~~~~v~~~H~~~V~~lp~g~~vlA~s 174 (697)
T 2vxo_A 98 --FTIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARS 174 (697)
T ss_dssp --TTSSCCEEEEEHHHHHHHHHTTCCBCC--------CEEEEECTTSGGGTTCCSEEEECCCSSCCBSSCCTTCEEEEEE
T ss_pred --HhCCCCEEEECHHHHHHHHHhCCeEeec-CCCccceEEEEecCCChhhhcCCccCcceeecccceecCCCCeEEEEEe
Confidence 334699999 999999999999999999 788999653 1 236889999999999999999999933
Q ss_pred CCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHH-hhcCCCCCHH
Q 007779 191 EGSIMGGGGS----IGPHYSGND---PREMR-LVGALRE-VLAGGHLGYE 231 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~k-l~~G~~Lt~e 231 (590)
++.|+|++|+ ||||||||. +.|.. +++|+.+ .....+.+.+
T Consensus 175 ~~~i~ai~~~~~~i~GvQFHPE~~~t~~g~~ll~nFl~~i~~~~~~~~~~ 224 (697)
T 2vxo_A 175 GNIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQ 224 (697)
T ss_dssp TTEEEEEEETTTTEEEESSCTTSSSSTTHHHHHHHHHTTTTCCCSCCCHH
T ss_pred CCceEEEEeCCCCEEEEEecccCCCCccchhhhhhhhhccccccccchhh
Confidence 5699999986 999999998 45766 8899844 4444566643
|
| >1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.4e-20 Score=178.34 Aligned_cols=150 Identities=13% Similarity=0.064 Sum_probs=106.8
Q ss_pred ceeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhh--hhHH
Q 007779 49 IRLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEA--FKVL 119 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~--g~~~ 119 (590)
++|.++| |+++ .+|+++|.++.++++++ + ++.+|+||| ||||+|... ... ....
T Consensus 3 ~~I~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~----~------------l~~~d~lil-~G~g~~~~~~~~l~~~~~~ 65 (200)
T 1ka9_H 3 MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPK----A------------HEEADLLVL-PGQGHFGQVMRAFQESGFV 65 (200)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHTTCEEEEESSTT----S------------CSSCSEEEE-CCCSCHHHHHHTTSSSCTH
T ss_pred cEEEEEeCCCccHHHHHHHHHHCCCeEEEecChH----H------------cccCCEEEE-CCCCcHHHHHHHHHhcCHH
Confidence 4677777 7887 78999999999997652 1 335699999 999998521 011 3356
Q ss_pred HHHHHH-hcCCCCccc-ccchHHHHhH---hC---------ceeeccC--CCCcCcccc--------C-CceeEEeccch
Q 007779 120 DTILRS-AKGDLKDEE-EVSKAQLGAF---FS---------AMTIRAN--AFPEATQWS--------E-GERRAMNTFWP 174 (590)
Q Consensus 120 ~~~i~~-~~~~~PilG-CLGhQ~i~~~---~G---------~~v~~~~--~~~~hG~~s--------~-~~~~~~~ryHs 174 (590)
++ |++ +..++|+|| |+|||.|+.+ +| ++|.+.+ +.+++|... . .. +.+.++||
T Consensus 66 ~~-i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg~~~l~~~~g~v~~~~~~~~~~~G~~~v~~~~~l~~~~~-~~~~~~Hs 143 (200)
T 1ka9_H 66 ER-VRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGGAFAPLTG-RHFYFANS 143 (200)
T ss_dssp HH-HHHHHHTTCCEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSEEEEEECEECGGGGGGTT-CEEEEEES
T ss_pred HH-HHHHHHcCCeEEEEcHHHHHHHHhccccCCcCCccccccEEEECCCCCCCceeEEEEEechhhhcCCC-CCEEEecc
Confidence 77 665 456799999 9999999999 79 8888762 134445221 0 12 67889999
Q ss_pred hccccCCCcEEEEe-ecC-C-cEEEEEcC---CCCcccCCCc--hhhH-H---HHHHH
Q 007779 175 LLMRALPPDVIFIA-DPE-G-SIMGGGGS---IGPHYSGNDP--REMR-L---VGALR 220 (590)
Q Consensus 175 l~v~~~p~~l~v~a-~~~-g-~im~~~h~---~gvQfHPEs~--~~m~-L---~~~L~ 220 (590)
+.+ .+++. ++ | +++ | ++++++|+ ||||||||+. .+.+ + ++|++
T Consensus 144 ~~~-~~~~~-~v-a~s~~~g~~~~~~~~~~~i~gvQfHPE~~~~~g~~l~~~~~~F~~ 198 (200)
T 1ka9_H 144 YYG-PLTPY-SL-GKGEYEGTPFTALLAKENLLAPQFHPEKSGKAGLAFLALARRYFE 198 (200)
T ss_dssp EEC-CCCTT-CC-EEEEETTEEEEEEEECSSEEEESSCTTSSHHHHHHHHHHHHHHC-
T ss_pred ccc-CCCCC-cE-EEEEeCCeEEEEEEeeCCEEEEecCCCcCccchhHHHHHHHHHHh
Confidence 999 66554 45 7 665 6 79999987 9999999983 4444 5 66654
|
| >2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-19 Score=185.59 Aligned_cols=164 Identities=7% Similarity=-0.070 Sum_probs=110.1
Q ss_pred eeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHh
Q 007779 53 VKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSA 126 (590)
Q Consensus 53 ~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~ 126 (590)
+.||+|| ++..+++.++.|+++|+.++.... . ... ...++.+|+|||+||||.|. ..+ .+++ ++.+
T Consensus 21 ~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~-~-~~~-~~~~~~~dgiil~GG~~~~~---~~~-~~~~-i~~~ 92 (273)
T 2w7t_A 21 AGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPN-A-DEA-RKALLGCDGIFVPGGFGNRG---VDG-KCAA-AQVA 92 (273)
T ss_dssp HTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTT-T-HHH-HHHHHTCSEEEECCCCTTTT---HHH-HHHH-HHHH
T ss_pred CchHHHHHHHHHHHHHHhcCCceEEeccChhhccccc-c-hhH-HHHHhhCCEEEecCCCCCcC---chh-HHHH-HHHH
Confidence 3678888 344566888999999975432100 0 000 01255789999999999976 444 4566 6655
Q ss_pred -cCCCCccc-ccchHHHHhHhCceeec---cC--C------CC-----cCccc----------c-----C---------C
Q 007779 127 -KGDLKDEE-EVSKAQLGAFFSAMTIR---AN--A------FP-----EATQW----------S-----E---------G 164 (590)
Q Consensus 127 -~~~~PilG-CLGhQ~i~~~~G~~v~~---~~--~------~~-----~hG~~----------s-----~---------~ 164 (590)
..++|+|| |||||.|+.+|||+|.+ ++ . .+ .|++. . . +
T Consensus 93 ~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~v~~~~~~s~l~~~~~ 172 (273)
T 2w7t_A 93 RMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMDCDRNKMGANMHLGACDVYIVEKSSIMAKIYS 172 (273)
T ss_dssp HHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCGGGBCSSCBCCEEEEEEEEECCTTSHHHHHTT
T ss_pred HHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeeccccccccCCcccccceEEEEecCCcHHHHHhC
Confidence 35799999 99999999999999952 21 0 01 13321 0 1 1
Q ss_pred ceeEEec--cchhccc-----cC-CCcEEEEe-ecC----C-cEEEEEcC-----CCCcccCCC---ch-hhH-HHHHHH
Q 007779 165 ERRAMNT--FWPLLMR-----AL-PPDVIFIA-DPE----G-SIMGGGGS-----IGPHYSGND---PR-EMR-LVGALR 220 (590)
Q Consensus 165 ~~~~~~r--yHsl~v~-----~~-p~~l~v~a-~~~----g-~im~~~h~-----~gvQfHPEs---~~-~m~-L~~~L~ 220 (590)
....+.. .|||.|+ .+ |++++++| ++| | .|||++|+ +|||||||+ +. +.. +++|++
T Consensus 173 ~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~~~~~~~~l~~~Fv~ 252 (273)
T 2w7t_A 173 KSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFISTPMDPAPTYLSFMA 252 (273)
T ss_dssp TCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSCBTTBCCHHHHHHHH
T ss_pred CCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCCCCCchHHHHHHHHH
Confidence 1334444 4688883 46 78899999 777 6 79999997 499999997 22 244 888887
Q ss_pred Hhhc
Q 007779 221 EVLA 224 (590)
Q Consensus 221 kl~~ 224 (590)
....
T Consensus 253 ~~~~ 256 (273)
T 2w7t_A 253 AAAK 256 (273)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7654
|
| >1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-19 Score=186.49 Aligned_cols=155 Identities=9% Similarity=0.012 Sum_probs=109.2
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh----hhHHHHHHHHh--cC-CCCc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA----FKVLDTILRSA--KG-DLKD 132 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~----g~~~~~~i~~~--~~-~~Pi 132 (590)
++|+++|..+.++++++ +.+++. ..++.+|+|||++||+++... .. ..+++. +++. .+ ++|+
T Consensus 59 ~~l~~~G~~~~vv~~~~-~~~~i~--------~~l~~~dglil~GG~~~v~p~-~~~~~~~~l~~~-~~~~~~~g~~~Pi 127 (315)
T 1l9x_A 59 KYLESAGARVVPVRLDL-TEKDYE--------ILFKSINGILFPGGSVDLRRS-DYAKVAKIFYNL-SIQSFDDGDYFPV 127 (315)
T ss_dssp HHHHHTTCEEEEECSSC-CHHHHH--------HHHHHSSEEEECCCCCCTTTC-HHHHHHHHHHHH-HHHHHHTTCCCCE
T ss_pred HHHHHCCCEEEEEecCC-CHHHHH--------HHHhcCCEEEEeCCCcccChh-hhhHHHHHHHHH-HHHHHhcCCCceE
Confidence 77888999999999875 222211 114567999999999997521 12 234555 3333 23 5999
Q ss_pred cc-ccchHHHHhHhCceeeccCCCCcCcccc--------CCc--------e--------eEEeccchhccc--------c
Q 007779 133 EE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------EGE--------R--------RAMNTFWPLLMR--------A 179 (590)
Q Consensus 133 lG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------~~~--------~--------~~~~ryHsl~v~--------~ 179 (590)
|| |+|||.|+.++||++.+. +.+.||+.. .+. . ..+.+||++.|+ .
T Consensus 128 LGIC~G~Qll~~a~GG~~~~~-~~~~~g~~~p~~~~~~~~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~~~~~~~~ 206 (315)
T 1l9x_A 128 WGTCLGFEELSLLISGECLLT-ATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEK 206 (315)
T ss_dssp EEETHHHHHHHHHHHSSCCCE-EEEEEEEEECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHH
T ss_pred EEEChHHHHHHHHhCCccccc-cccccCCCCCeeeccCCCCChHHHhcChhhhhhccccceEEEhhhhhcCccccccccc
Confidence 99 999999999999998876 666777532 111 0 124569999997 7
Q ss_pred CCCcEEEEe-ecCCc---EEEEEcC----CCCcccCCCc------------------hhhH-HHHHHHHhhcCC
Q 007779 180 LPPDVIFIA-DPEGS---IMGGGGS----IGPHYSGNDP------------------REMR-LVGALREVLAGG 226 (590)
Q Consensus 180 ~p~~l~v~a-~~~g~---im~~~h~----~gvQfHPEs~------------------~~m~-L~~~L~kl~~G~ 226 (590)
+|++++++| ++||. ||+++|+ ||||||||.. .+.. +.+|++......
T Consensus 207 l~~g~~v~A~s~dg~ve~i~~i~~~~~~i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~ 280 (315)
T 1l9x_A 207 LKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNN 280 (315)
T ss_dssp HHHHEEEEEEEESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cCCCCEEEEEcCCCCEEEEEEeccCCCCEEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence 888999999 77886 5666885 9999999961 1334 777877765443
|
| >3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=174.75 Aligned_cols=152 Identities=12% Similarity=0.053 Sum_probs=108.1
Q ss_pred HHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCC-CCCCchhh-------------hhHHHHHHHHh-
Q 007779 62 IDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQT-RPLREDEA-------------FKVLDTILRSA- 126 (590)
Q Consensus 62 ~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg-~P~~~~~~-------------g~~~~~~i~~~- 126 (590)
+++.|..+.+++.+.- .+.. ..++.+|+|||++||+ +|.-..+. -..+++ ++.+
T Consensus 37 l~~aG~~pv~lp~~~~--~~~~--------~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~l-ir~a~ 105 (254)
T 3fij_A 37 IQKVGGFPIALPIDDP--STAV--------QAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIAL-VRAAL 105 (254)
T ss_dssp HHHHTCEEEEECCCCG--GGHH--------HHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHH-HHHHH
T ss_pred HHHCCCEEEEEeCCCc--hHHH--------HHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHH-HHHHH
Confidence 4455988888876531 1010 1255779999999998 45421110 114566 6664
Q ss_pred cCCCCccc-ccchHHHHhHhCceeeccC-----CCCcCccc-------c-----C--------CceeEEeccchhccccC
Q 007779 127 KGDLKDEE-EVSKAQLGAFFSAMTIRAN-----AFPEATQW-------S-----E--------GERRAMNTFWPLLMRAL 180 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~~G~~v~~~~-----~~~~hG~~-------s-----~--------~~~~~~~ryHsl~v~~~ 180 (590)
..++|+|| |+|||.|+.++||++.+.. ....|.+. . . ++.+.+.+||+..|+.+
T Consensus 106 ~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~~~~~~~~~h~~~~~~~~g~~~v~~~~~s~l~~~~~~~~~v~~~H~~~v~~l 185 (254)
T 3fij_A 106 DAGKPIFAICRGMQLVNVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIKKL 185 (254)
T ss_dssp HTTCCEEEETHHHHHHHHHTTCCEESSGGGSSSCCCCCBCCSCTTSCCEEEEECTTSSGGGTCCTTEEECCBCSCEESSC
T ss_pred HcCCCEEEECHHHHHHHHHhCCceecccccccCccccccCCCCCccceEEEEeCCCChHHHhcCCcEEEEEeccchhhcc
Confidence 45899999 9999999999999998751 12344321 1 1 23678999999999999
Q ss_pred CCcEEEEe-ecCCcEEEEEcC------CCCcccCCCc-----hhhH-HHHHHHHhhc
Q 007779 181 PPDVIFIA-DPEGSIMGGGGS------IGPHYSGNDP-----REMR-LVGALREVLA 224 (590)
Q Consensus 181 p~~l~v~a-~~~g~im~~~h~------~gvQfHPEs~-----~~m~-L~~~L~kl~~ 224 (590)
|++++++| ++||.|+|++++ +|||||||.. .+.. +++|++.+..
T Consensus 186 ~~g~~v~a~s~dg~ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~ 242 (254)
T 3fij_A 186 APSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKK 242 (254)
T ss_dssp CSSEEEEEEETTCCEEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEEeCCCcEEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHH
Confidence 99999999 889999999975 7999999973 2345 8888876543
|
| >1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-18 Score=191.67 Aligned_cols=161 Identities=10% Similarity=-0.092 Sum_probs=109.6
Q ss_pred eEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
+.+.|+.|| ++..++|+++.|+++|+-+++. ..-...++.+|+|||+||||+|. ..|. +++ ++
T Consensus 310 v~l~D~y~Sv~~aL~~~g~~~g~~v~I~~~d~~~~~~------~~~~~~L~~~DGIILpGGfGd~~---~~g~-i~~-ir 378 (550)
T 1vco_A 310 VKMPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEA------ADLEEAFRDVSGILVPGGFGVRG---IEGK-VRA-AQ 378 (550)
T ss_dssp C---CTTHHHHHHHHHHHHHTTEEEEEEEEEGGGC--------CCHHHHTTTCSCEEECCCCSSTT---HHHH-HHH-HH
T ss_pred EEEEecHHHHHHHHHHHHHHcCCeEEEEEeCcccccc------chHHHHHhcCCEEEECCCCCCcc---hhhh-HHH-HH
Confidence 568899998 3334457899999888633210 00001255679999999999997 5554 466 66
Q ss_pred Hhc-CCCCccc-ccchHHHHhHhCceeeccCCC---------CcCcccc--C---------C------------------
Q 007779 125 SAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAF---------PEATQWS--E---------G------------------ 164 (590)
Q Consensus 125 ~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~---------~~hG~~s--~---------~------------------ 164 (590)
.+. .++|+|| |||||.|+.+||++|.++ +. ..|+.+. + +
T Consensus 379 ~a~e~~iPiLGICLGmQlL~~a~Gg~v~~l-~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~s~l~ 457 (550)
T 1vco_A 379 YARERKIPYLGICLGLQIAVIEFARNVAGL-KGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPGTLLH 457 (550)
T ss_dssp HHHHTTCCEEEETHHHHHHHHHHHHHTSCC-TTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTTSHHH
T ss_pred HHHHCCCcEEEECcCHHHHHHHhCcccccC-CccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccCchhh
Confidence 654 5799999 999999999999999887 42 2344332 0 0
Q ss_pred -----ceeEEeccchhccc-----cCC-CcEEEEe-ecCC------cEEEEEcC----C-CCcccCCC---ch-hhH-HH
Q 007779 165 -----ERRAMNTFWPLLMR-----ALP-PDVIFIA-DPEG------SIMGGGGS----I-GPHYSGND---PR-EMR-LV 216 (590)
Q Consensus 165 -----~~~~~~ryHsl~v~-----~~p-~~l~v~a-~~~g------~im~~~h~----~-gvQfHPEs---~~-~m~-L~ 216 (590)
+.+...+.|.|.|+ .+| +++++++ ++|| .|||++|+ | |||||||+ +. +.. |.
T Consensus 458 ~iy~~~~v~e~h~H~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~ 537 (550)
T 1vco_A 458 RLYGKEEVLERHRHRYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFV 537 (550)
T ss_dssp HHHCCSEEEEEEEESEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHH
T ss_pred HhcCCceeeeeccceEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHH
Confidence 01123556777773 566 6899999 6664 79999997 6 99999998 22 444 88
Q ss_pred HHHHHhh
Q 007779 217 GALREVL 223 (590)
Q Consensus 217 ~~L~kl~ 223 (590)
+|++...
T Consensus 538 ~Fv~aa~ 544 (550)
T 1vco_A 538 GFVEAAL 544 (550)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887653
|
| >2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=166.17 Aligned_cols=149 Identities=13% Similarity=0.051 Sum_probs=103.6
Q ss_pred ccccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCC-CCCCCchhhhhHHHHHHHHh-cCC-
Q 007779 55 ADLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQ-TRPLREDEAFKVLDTILRSA-KGD- 129 (590)
Q Consensus 55 ~~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGP-g~P~~~~~~g~~~~~~i~~~-~~~- 129 (590)
.++.+ ++|+++|.++.++++++ + ++.+|+|||++|| +.|.+........+. ++++ ..+
T Consensus 12 ~~~~~~~~~l~~~G~~~~~~~~~~----~------------l~~~dglil~GG~~~~~~~~~~~~~~~~~-i~~~~~~~~ 74 (191)
T 2ywd_A 12 GDFREHKEALKRLGIEAKEVRKKE----H------------LEGLKALIVPGGESTTIGKLAREYGIEDE-VRKRVEEGS 74 (191)
T ss_dssp SCHHHHHHHHHTTTCCCEEECSGG----G------------GTTCSEEEECSSCHHHHHHHHHHTTHHHH-HHHHHHTTC
T ss_pred CchHHHHHHHHHCCCEEEEeCChh----h------------hccCCEEEECCCChhhhHHhhhhhhHHHH-HHHHHHCCC
Confidence 44444 67888899999998753 1 3356999999995 333311112345677 6654 467
Q ss_pred CCccc-ccchHHHHhHhCc------------eeeccCCCCcCccc---c---CC-ceeEEeccchhccccCCCcEEEEe-
Q 007779 130 LKDEE-EVSKAQLGAFFSA------------MTIRANAFPEATQW---S---EG-ERRAMNTFWPLLMRALPPDVIFIA- 188 (590)
Q Consensus 130 ~PilG-CLGhQ~i~~~~G~------------~v~~~~~~~~hG~~---s---~~-~~~~~~ryHsl~v~~~p~~l~v~a- 188 (590)
+|+|| |+|||.|+.++|+ ++.+. ++..+... . .+ .++.+.+|||+.++.+|++++++|
T Consensus 75 ~PilGiC~G~Q~l~~~~gg~~~~~~lg~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~Hs~~v~~l~~~~~~~a~ 153 (191)
T 2ywd_A 75 LALFGTCAGAIWLAKEIVGYPEQPRLGVLEAWVERN-AFGRQVESFEEDLEVEGLGSFHGVFIRAPVFRRLGEGVEVLAR 153 (191)
T ss_dssp CEEEEETHHHHHHEEEETTCTTCCCCCCEEEEEETT-CSCCSSSEEEEEEEETTTEEEEEEEESCCEEEEECTTCEEEEE
T ss_pred CeEEEECHHHHHHHHHhCCCCCCccccccceEEEcC-CcCCccccccccccccCCCceeEEEEcccceeccCCCcEEEEE
Confidence 99999 9999999999998 33333 22111000 0 11 356788999999988999999999
Q ss_pred ecCCcEEEEEcC--CCCcccCCCc-hhhHHHHHHHHh
Q 007779 189 DPEGSIMGGGGS--IGPHYSGNDP-REMRLVGALREV 222 (590)
Q Consensus 189 ~~~g~im~~~h~--~gvQfHPEs~-~~m~L~~~L~kl 222 (590)
+ |+.+||++|+ ||+|||||-. ...-+++|++.+
T Consensus 154 ~-~~~~~a~~~~~~~gvQfHPE~~~~~~l~~~f~~~~ 189 (191)
T 2ywd_A 154 L-GDLPVLVRQGKVLASSFHPELTEDPRLHRYFLELA 189 (191)
T ss_dssp E-TTEEEEEEETTEEEESSCGGGSSCCHHHHHHHHHH
T ss_pred E-CCEEEEEEECCEEEEEeCCCCCCCcHHHHHHHHHh
Confidence 6 6889999998 9999999963 232377777653
|
| >2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.9e-18 Score=162.08 Aligned_cols=156 Identities=10% Similarity=0.018 Sum_probs=106.0
Q ss_pred eeEeecccc---H--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhhhhHHHHHH
Q 007779 50 RLTVKADLD---S--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d---~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~g~~~~~~i 123 (590)
+|.++|.-| + .+++++|.++.++++++ + ++.+|+|||++||+.+.+. .+.....+. |
T Consensus 3 ~I~il~~~~~~~~~~~~l~~~g~~~~~~~~~~----~------------l~~~d~iil~GG~~~~~~~~~~~~~~~~~-i 65 (196)
T 2nv0_A 3 TIGVLGLQGAVREHIHAIEACGAAGLVVKRPE----Q------------LNEVDGLILPGGESTTMRRLIDTYQFMEP-L 65 (196)
T ss_dssp EEEEECSSSCCHHHHHHHHHTTCEEEEECSGG----G------------GGGCSEEEECCSCHHHHHHHHHHTTCHHH-H
T ss_pred EEEEEEccCCcHHHHHHHHHCCCEEEEeCChH----H------------HhhCCEEEECCCChhhHHHHhhhHHHHHH-H
Confidence 455665433 3 67888899988886531 1 3456999999998665411 011233566 6
Q ss_pred HHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCc--------Cccc------c---C--CceeEEeccchhccccCCC
Q 007779 124 RSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPE--------ATQW------S---E--GERRAMNTFWPLLMRALPP 182 (590)
Q Consensus 124 ~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~--------hG~~------s---~--~~~~~~~ryHsl~v~~~p~ 182 (590)
+.+ ..++|++| |+|||.|+.++|+.+.+. -... +|.. . . |.++.+.++|++.|+.+|+
T Consensus 66 ~~~~~~~~pilgIC~G~q~l~~~~gg~~~~~-lg~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~h~~~v~~~~~ 144 (196)
T 2nv0_A 66 REFAAQGKPMFGTCAGLIILAKEIAGSDNPH-LGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGE 144 (196)
T ss_dssp HHHHHTTCCEEEETHHHHHHSBCCC----CC-CCCSCEEEECCCSCTTTSEEEEEECCTTCSSCEEEEEESCCEEEEECT
T ss_pred HHHHHCCCcEEEECHHHHHHHHHhcCCCCCc-ccCCceeEeccCCCcccccccCCcccccCCCceEEEEEecceecccCC
Confidence 654 56799999 999999999999965322 1111 1211 0 1 3478889999999988899
Q ss_pred cEEEEeecCCcEEEEEcC--CCCcccCCCchhhH-HHHHHHHhh
Q 007779 183 DVIFIADPEGSIMGGGGS--IGPHYSGNDPREMR-LVGALREVL 223 (590)
Q Consensus 183 ~l~v~a~~~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl~ 223 (590)
+++++|..|+.++|+++. +|+|||||...... +++|++.+.
T Consensus 145 ~~~v~a~~d~~~~a~~~~~~~gvQfHPE~~~~~~l~~~fl~~~~ 188 (196)
T 2nv0_A 145 NVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVE 188 (196)
T ss_dssp TCEEEEEETTEEEEEEETTEEEESSCTTSSSCCHHHHHHHHHHH
T ss_pred CcEEEEEECCEEEEEEECCEEEEEECCccCCchHHHHHHHHHHH
Confidence 999999337899999988 99999999854433 677776654
|
| >1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=163.93 Aligned_cols=157 Identities=10% Similarity=0.021 Sum_probs=111.0
Q ss_pred cceeEeeccccH-----HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-hhhhhHHHH
Q 007779 48 RIRLTVKADLDS-----ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-DEAFKVLDT 121 (590)
Q Consensus 48 ~~~~~~~~~~d~-----~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-~~~g~~~~~ 121 (590)
+++|.++++.++ .+|++.|.++.++++++ + ++.+|+|||++||+.+.+. .......++
T Consensus 23 ~~~I~il~~~~~~~~~~~~l~~~G~~~~~~~~~~----~------------l~~~Dglil~GG~~~~~~~~~~~~~~~~~ 86 (219)
T 1q7r_A 23 NMKIGVLGLQGAVREHVRAIEACGAEAVIVKKSE----Q------------LEGLDGLVLPGGESTTMRRLIDRYGLMEP 86 (219)
T ss_dssp CCEEEEESCGGGCHHHHHHHHHTTCEEEEECSGG----G------------GTTCSEEEECCCCHHHHHHHHHHTTCHHH
T ss_pred CCEEEEEeCCCCcHHHHHHHHHCCCEEEEECCHH----H------------HhhCCEEEECCCChHHHHHHhhhhHHHHH
Confidence 456777776553 45777899998887631 1 3456999999998755310 001223566
Q ss_pred HHHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCc--------Cccc-------c--CC--ceeEEeccchhccccC
Q 007779 122 ILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPE--------ATQW-------S--EG--ERRAMNTFWPLLMRAL 180 (590)
Q Consensus 122 ~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~--------hG~~-------s--~~--~~~~~~ryHsl~v~~~ 180 (590)
|+++ ..++|+|| |+|+|.|+.++|+.+.+. -... +|.. . .+ ..+.+.++|++.|+.+
T Consensus 87 -i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~~-lg~~~~~~~~~~~g~~~~~~~~~~~~~g~g~~~~~~~~h~~~v~~l 164 (219)
T 1q7r_A 87 -LKQFAAAGKPMFGTCAGLILLAKRIVGYDEPH-LGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEA 164 (219)
T ss_dssp -HHHHHHTTCCEEEETTHHHHHEEEEESSCCCC-CCCEEEEEECHHHHCCCCCEEEEEEETTTEEEEEEEESSCCEEEEE
T ss_pred -HHHHHHcCCeEEEECHHHHHHHHHhCCCCcCC-cCccceEEEecCCCccccceecCcccCCCCCceEEEEEecceeecc
Confidence 6654 56799999 999999999999976432 1111 1111 0 22 4678899999999889
Q ss_pred CCcEEEEe-ecCCcEEEEEcC--CCCcccCCCchhhH-HHHHHHHhh
Q 007779 181 PPDVIFIA-DPEGSIMGGGGS--IGPHYSGNDPREMR-LVGALREVL 223 (590)
Q Consensus 181 p~~l~v~a-~~~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl~ 223 (590)
|++++++| + ||.++|+++. +|+|||||...... +++|++.+.
T Consensus 165 ~~~~~v~a~s-dg~~ea~~~~~i~GvQfHPE~~~~~~l~~~fl~~~~ 210 (219)
T 1q7r_A 165 GDGVDVLATY-NDRIVAARQGQFLGCSFHPELTDDHRLMQYFLNMVK 210 (219)
T ss_dssp CTTCEEEEEE-TTEEEEEEETTEEEESSCGGGSSCCHHHHHHHHHHH
T ss_pred CCCcEEEEEc-CCEEEEEEECCEEEEEECcccCCCHHHHHHHHHHHH
Confidence 99999999 6 8999999998 99999999854433 777776653
|
| >1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-17 Score=184.76 Aligned_cols=160 Identities=7% Similarity=-0.036 Sum_probs=109.7
Q ss_pred eEeeccccH--HHHHHhC----CceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHH
Q 007779 51 LTVKADLDS--ALIDQLG----LKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR 124 (590)
Q Consensus 51 ~~~~~~~d~--~~~~~lg----~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~ 124 (590)
+.+.|+.|| ..|.+.| .+|.++++|+-++... ... .++.+|+||||||||+|. ..+ .+++ ++
T Consensus 299 v~l~D~y~Si~~aL~~~G~~~~~~V~i~~~d~e~i~~~---~~~----~l~~~DGIilsGGpg~~~---~~g-~~~~-i~ 366 (545)
T 1s1m_A 299 IELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETR---GVE----ILKGLDAILVPGGFGYRG---VEG-MITT-AR 366 (545)
T ss_dssp CSSGGGGHHHHHHHHHHHHHHTEEEEEEEEEHHHHHHH---CTT----TTTTCSEEEECCCCSSTT---HHH-HHHH-HH
T ss_pred EEEEEHHHHHHHHHHHhCcccCCeEEEccCCHHHhhhh---hhh----hhhcCCEEEECCCCCCcc---chh-hHHH-HH
Confidence 567889998 4455554 5678888875332210 001 145679999999999997 444 3456 66
Q ss_pred Hhc-CCCCccc-ccchHHHHhHhCceeeccCCCC---------cCcccc------------C------------------
Q 007779 125 SAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFP---------EATQWS------------E------------------ 163 (590)
Q Consensus 125 ~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~---------~hG~~s------------~------------------ 163 (590)
.+. .++|+|| |||||.|+.+||++|.++ +.. .|+..+ +
T Consensus 367 ~a~~~~~PiLGIClG~Qll~va~Gg~v~~l-~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~ 445 (545)
T 1s1m_A 367 FARENNIPYLGICLGMQVALIDYARHVANM-ENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQ 445 (545)
T ss_dssp HHHHTTCCEEEETHHHHHHHHHHHHHHHCC-TTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEE
T ss_pred HHHHCCCcEEEECChHHHHHHHhCCceecC-CCCcccccCCCCCCceEEeecccccccccccccccccccCcccccccee
Confidence 554 5799999 999999999999999876 432 222211 0
Q ss_pred -------------C-ceeEEeccchhccc-----cCC-CcEEEEe-ecCC-cEEEEEcC----C-CCcccCCC---ch-h
Q 007779 164 -------------G-ERRAMNTFWPLLMR-----ALP-PDVIFIA-DPEG-SIMGGGGS----I-GPHYSGND---PR-E 212 (590)
Q Consensus 164 -------------~-~~~~~~ryHsl~v~-----~~p-~~l~v~a-~~~g-~im~~~h~----~-gvQfHPEs---~~-~ 212 (590)
+ ..+...+.|.+.|+ .++ ++++++| ++|| .|||++|+ | |||||||+ +. +
T Consensus 446 v~l~~~s~l~~iyg~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g 525 (545)
T 1s1m_A 446 CQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDG 525 (545)
T ss_dssp EEECTTCHHHHHTTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTC
T ss_pred eEeccCCHHHHhcCCceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCCh
Confidence 0 01234567777773 454 7899999 7888 79999997 5 99999997 32 4
Q ss_pred hH-HHHHHHHhh
Q 007779 213 MR-LVGALREVL 223 (590)
Q Consensus 213 m~-L~~~L~kl~ 223 (590)
.. |.+|++...
T Consensus 526 ~~LF~~Fv~aa~ 537 (545)
T 1s1m_A 526 HPLFAGFVKAAS 537 (545)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 44 788877543
|
| >2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.7e-17 Score=157.36 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=104.4
Q ss_pred cceeEeecc---ccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHH
Q 007779 48 RIRLTVKAD---LDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVL 119 (590)
Q Consensus 48 ~~~~~~~~~---~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~ 119 (590)
+++|.++|. +.+ ..|++.|.++.++++++ + ++.+|+|||+.| .|...++. ....
T Consensus 20 ~~~I~ii~~~~~~~~~~~~l~~~g~~~~~~~~~~----~------------l~~~d~iil~GG--~~~~~~~~~~~~~~~ 81 (208)
T 2iss_D 20 HMKIGVLGVQGDVREHVEALHKLGVETLIVKLPE----Q------------LDMVDGLILPGG--ESTTMIRILKEMDMD 81 (208)
T ss_dssp CCEEEEECSSSCHHHHHHHHHHTTCEEEEECSGG----G------------GGGCSEEEECSS--CHHHHHHHHHHTTCH
T ss_pred CcEEEEEECCCchHHHHHHHHHCCCEEEEeCChH----H------------HhhCCEEEECCC--cHHHHHhhhhhhhHH
Confidence 567777764 222 45667799988887542 1 335699999554 45421111 1135
Q ss_pred HHHHHHh-cCCCCccc-ccchHHHHhHhCc-----------eeeccCCCCcCc-------ccc--CCceeEEeccchhcc
Q 007779 120 DTILRSA-KGDLKDEE-EVSKAQLGAFFSA-----------MTIRANAFPEAT-------QWS--EGERRAMNTFWPLLM 177 (590)
Q Consensus 120 ~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~-----------~v~~~~~~~~hG-------~~s--~~~~~~~~ryHsl~v 177 (590)
+. |+++ ..++|+|| |+|+|.|+.++|+ ++.+. +.+.+. .+. .+.++.+.++|++.|
T Consensus 82 ~~-i~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~lg~~~~~v~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 159 (208)
T 2iss_D 82 EK-LVERINNGLPVFATCAGVILLAKRIKNYSQEKLGVLDITVERN-AYGRQVESFETFVEIPAVGKDPFRAIFIRAPRI 159 (208)
T ss_dssp HH-HHHHHHTTCCEEEETHHHHHHEEEEC---CCCCCCEEEEEETT-TTCSGGGCEEEEECCGGGCSSCEEEEESSCCEE
T ss_pred HH-HHHHHHCCCeEEEECHHHHHHHHHcCCCCCCCccccceEEEec-CCCcccccccCCcccccCCCCceEEEEEeCccc
Confidence 66 6654 56799999 9999999999999 66665 322110 000 124788999999999
Q ss_pred ccCCCcEEEEeecCCcEEEEEcC--CCCcccCCCchhhH-HHHHHH
Q 007779 178 RALPPDVIFIADPEGSIMGGGGS--IGPHYSGNDPREMR-LVGALR 220 (590)
Q Consensus 178 ~~~p~~l~v~a~~~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~ 220 (590)
+.+|++++++|..|+.+||+++. ||+|||||...... +++|++
T Consensus 160 ~~~~~~~~v~a~~d~~~~a~~~~~i~GvQfHPE~~~~~~l~~~fl~ 205 (208)
T 2iss_D 160 VETGKNVEILATYDYDPVLVKEGNILACTFHPELTDDLRLHRYFLE 205 (208)
T ss_dssp EEECSSCEEEEEETTEEEEEEETTEEEESSCGGGSSCCHHHHHHHT
T ss_pred ccCCCCcEEEEEECCEEEEEEECCEEEEEeCCCcCCcHHHHHHHHH
Confidence 88899999999337999999988 99999999854433 666664
|
| >2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.2e-16 Score=162.56 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=88.1
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHh-cCCCCccc-ccchHHHHhHhCceeec---cC--CC-----------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIR---AN--AF----------- 155 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~---~~--~~----------- 155 (590)
++.+|+|||++|||+|. .. ..+++ ++.+ ..++|+|| |+|||.|+.+|||+|.+ ++ .+
T Consensus 88 l~~~dgiil~GG~~~~~---~~-~~~~~-i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~ 162 (289)
T 2v4u_A 88 LCKADGILVPGGFGIRG---TL-GKLQA-ISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVID 162 (289)
T ss_dssp HHHCSEEEECSCCSSTT---HH-HHHHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEE
T ss_pred HhhCCEEEecCCCCchh---HH-HHHHH-HHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceec
Confidence 45679999999999966 33 35666 6665 46799999 99999999999999962 21 01
Q ss_pred -CcCccc----------c------C--------CceeEEecc--chhcc-----ccCC-CcEEEEe-ecCCc-EEEEEcC
Q 007779 156 -PEATQW----------S------E--------GERRAMNTF--WPLLM-----RALP-PDVIFIA-DPEGS-IMGGGGS 200 (590)
Q Consensus 156 -~~hG~~----------s------~--------~~~~~~~ry--Hsl~v-----~~~p-~~l~v~a-~~~g~-im~~~h~ 200 (590)
+.|++. . . ++.+.+..+ |+|.| +.+| ++++++| ++||. |||++|+
T Consensus 163 ~~~h~~~~~~~~~~~g~~~v~~~~~~s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~ 242 (289)
T 2v4u_A 163 MPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELA 242 (289)
T ss_dssp CCBCCTTCSSCBCEEEEEEEEESCSCCHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEES
T ss_pred chhhcccccCCccccceEEEEEecCCCHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcC
Confidence 035431 1 1 222445444 45554 5788 8999999 88997 9999997
Q ss_pred ----C-CCcccCCCc---h-hhH-HHHHHHHhh
Q 007779 201 ----I-GPHYSGNDP---R-EMR-LVGALREVL 223 (590)
Q Consensus 201 ----~-gvQfHPEs~---~-~m~-L~~~L~kl~ 223 (590)
+ |||||||+. . +.. +.+|++.+.
T Consensus 243 ~~p~~lGvQfHPE~~~~~~~~~~lf~~Fv~~~~ 275 (289)
T 2v4u_A 243 NHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAAT 275 (289)
T ss_dssp SSSCEEEESSBGGGGCBTTBCCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCCCCCchHHHHHHHHHHHH
Confidence 4 999999982 2 334 777776553
|
| >3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-15 Score=167.42 Aligned_cols=160 Identities=13% Similarity=0.069 Sum_probs=107.9
Q ss_pred eeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHHHHh
Q 007779 53 VKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSA 126 (590)
Q Consensus 53 ~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~ 126 (590)
+.|+-+| +.-.+++.+|.+..+|+.+++..+... ...++.+|+||++||||+|. ..|. ++. ++.+
T Consensus 305 l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~----~~~L~~~DgIIlpGG~G~~~---~~g~-i~~-ir~a 375 (535)
T 3nva_A 305 LKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNL----NEILGNVNGIIVLPGFGSRG---AEGK-IKA-IKYA 375 (535)
T ss_dssp SGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCC----TTTTTSCSEEEECCCCSSTT---HHHH-HHH-HHHH
T ss_pred CchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccch----hhhccCCCEEEECCCCCCcc---HHHH-HHH-HHHH
Confidence 4567777 344556789999998876554211000 01266789999999999987 5554 456 6654
Q ss_pred c-CCCCccc-ccchHHHHhHhCceeeccCC------C------C----cCcc--------c-----c-----C-------
Q 007779 127 K-GDLKDEE-EVSKAQLGAFFSAMTIRANA------F------P----EATQ--------W-----S-----E------- 163 (590)
Q Consensus 127 ~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~------~------~----~hG~--------~-----s-----~------- 163 (590)
. .++|+|| |+|||.|+.+||+.|... + + | +|.+ + . .
T Consensus 376 ~~~~~PiLGIClG~Qll~va~Gg~v~g~-qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~gS~L~~i 454 (535)
T 3nva_A 376 REHNIPFLGICFGFQLSIVEFARDVLGL-SEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEGTIAYQL 454 (535)
T ss_dssp HHHTCCEEEETHHHHHHHHHHHHTTTCC-TTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTTSHHHHH
T ss_pred HHcCCcEEEECcchhHHHHHhhccccCc-cCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCCCcHHHH
Confidence 3 5799999 999999999999999532 1 1 1 1211 1 0 1
Q ss_pred -CceeEEe-ccchhccc-----cC-CCcEEEEe-ecCCcEEEEEcC-----CCCcccCCC---c-hhhH-HHHHHHHh
Q 007779 164 -GERRAMN-TFWPLLMR-----AL-PPDVIFIA-DPEGSIMGGGGS-----IGPHYSGND---P-REMR-LVGALREV 222 (590)
Q Consensus 164 -~~~~~~~-ryHsl~v~-----~~-p~~l~v~a-~~~g~im~~~h~-----~gvQfHPEs---~-~~m~-L~~~L~kl 222 (590)
|+..... ..|.+.|+ .+ +++|+++| ++||.|||++|+ +|||||||. + .+.. +.+|++..
T Consensus 455 yG~~~I~erHrHryeVNs~h~q~l~~~GL~vsA~s~DG~IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa 532 (535)
T 3nva_A 455 YGKKVVYERHRHRYEVNPKYVDILEDAGLVVSGISENGLVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAV 532 (535)
T ss_dssp HTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECTTCCEEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHH
T ss_pred hCCCeeeecccccceechHHHhhcccCCeEEEEEeCCCCEEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHH
Confidence 2222223 33777773 34 67899999 899999999997 699999997 2 2344 78887654
|
| >3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-15 Score=147.05 Aligned_cols=143 Identities=10% Similarity=-0.005 Sum_probs=100.4
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc-----hhhhhHHHHHHHHh-cCCCCcc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE-----DEAFKVLDTILRSA-KGDLKDE 133 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~-----~~~g~~~~~~i~~~-~~~~Pil 133 (590)
..|++.|.++.++++++ + ++.+|+|||+.|++.+... .......+. |+++ ...+|++
T Consensus 21 ~~l~~~g~~~~~~~~~~----~------------~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~pil 83 (213)
T 3d54_D 21 HALEINGFEPSYVGLDD----K------------LDDYELIILPGGFSYGDYLRPGAVAAREKIAFE-IAKAAERGKLIM 83 (213)
T ss_dssp HHHHTTTCEEEEECTTC----C------------CSSCSEEEECEECGGGGCSSTTHHHHTSTTHHH-HHHHHHHTCEEE
T ss_pred HHHHHCCCEEEEEecCC----C------------cccCCEEEECCCCchhhhhccccccccHHHHHH-HHHHHHCCCEEE
Confidence 56777799999887652 1 3456999996666544321 012335666 6554 4579999
Q ss_pred c-ccchHHHHhH--hCceeeccCCCC-cCcccc----C------------CceeEEeccc---hhccccCCCcEEEEe-e
Q 007779 134 E-EVSKAQLGAF--FSAMTIRANAFP-EATQWS----E------------GERRAMNTFW---PLLMRALPPDVIFIA-D 189 (590)
Q Consensus 134 G-CLGhQ~i~~~--~G~~v~~~~~~~-~hG~~s----~------------~~~~~~~ryH---sl~v~~~p~~l~v~a-~ 189 (590)
| |+|+|.|+.+ +|++|.+. +.. .|.++. . +..+.+.++| |+.+. |+.++++| +
T Consensus 84 gIC~G~qlLa~aGll~g~v~~~-~~~~~~~g~~~v~~~~~~~~l~~~~~~~~~~~~~~~H~~~s~~~~--~~~~~~~a~~ 160 (213)
T 3d54_D 84 GICNGFQILIEMGLLKGALLQN-SSGKFICKWVDLIVENNDTPFTNAFEKGEKIRIPIAHGFGRYVKI--DDVNVVLRYV 160 (213)
T ss_dssp ECHHHHHHHHHHTSSCSEEECC-SSSSCBCCEEEEEECCCSSTTSTTSCTTCEEEEECCBSSCEEECS--SCCEEEEEES
T ss_pred EECHHHHHHHHcCCCCCCeecC-CCCceEeeeEEEEeCCCCCceeeccCCCCEEEEEeecCceEEEec--CCCcEEEEEc
Confidence 9 9999999999 99999987 432 355443 1 1257778899 88873 46788988 5
Q ss_pred cC--C---cEEEEEcC----CCCcccCCCc--------hhhH-HHHHHHHh
Q 007779 190 PE--G---SIMGGGGS----IGPHYSGNDP--------REMR-LVGALREV 222 (590)
Q Consensus 190 ~~--g---~im~~~h~----~gvQfHPEs~--------~~m~-L~~~L~kl 222 (590)
++ | .|||+.|+ ||||||||.. .+.. +++|++.+
T Consensus 161 ~~~ng~~~~i~a~~~~~~~~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 161 KDVNGSDERIAGVLNESGNVFGLMPHPERAVEELIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp SCSSCCGGGEEEEECSSSCEEEECSCSTTTTSTTTTCSTTSHHHHHHHHHC
T ss_pred CCCCCCccceeEEEcCCCCEEEEeCCHHHhcCHhhhcCccHHHHHHHHHHh
Confidence 55 5 79999984 9999999973 2444 77777654
|
| >1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-16 Score=177.87 Aligned_cols=157 Identities=13% Similarity=0.002 Sum_probs=108.0
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---hhHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---FKVLD 120 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g~~~~ 120 (590)
+|.++|.-++ ++|+++|.++.++++++. . .++.+|+||| ||||+|....+. ....+
T Consensus 6 ~I~Iid~~~g~~~~~~~~l~~~G~~~~vv~~~~~--~------------~l~~~DglIL-pGgG~~~~~~~~l~~~~~~~ 70 (555)
T 1jvn_A 6 VVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKD--F------------NISGTSRLIL-PGVGNYGHFVDNLFNRGFEK 70 (555)
T ss_dssp EEEEECCSCSCCHHHHHHHHHTTCEEEEESSGGG--C------------CSTTCSCEEE-EECSCHHHHHHHHHHTTCHH
T ss_pred EEEEEECCCCCHHHHHHHHHHCCCEEEEECCccc--c------------ccccCCEEEE-CCCCchHhHhhhhhhccHHH
Confidence 5666663222 678888999999886531 1 1345689999 999987621100 11356
Q ss_pred HHHHHh-cCCCCccc-ccchHHHHhHh------------CceeeccC----CCCcCcccc--------C--CceeEEecc
Q 007779 121 TILRSA-KGDLKDEE-EVSKAQLGAFF------------SAMTIRAN----AFPEATQWS--------E--GERRAMNTF 172 (590)
Q Consensus 121 ~~i~~~-~~~~PilG-CLGhQ~i~~~~------------G~~v~~~~----~~~~hG~~s--------~--~~~~~~~ry 172 (590)
. |+++ ..++|+|| |+|||.|+.++ |++|.+.+ +.++||..+ . +..+.+.+|
T Consensus 71 ~-i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~lgg~v~~~~~~~~~~~~~G~~~v~~~~~L~~~l~~~~~~~~v 149 (555)
T 1jvn_A 71 P-IREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYKRYYFV 149 (555)
T ss_dssp H-HHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCSEEEEEEECCTTTSCSSEEEEECCCCCTTCCTTCCTTSCEEEE
T ss_pred H-HHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCCCCcEEEECCcCCCCCccccceEEEEcCHHHhhCCCCceEEEE
Confidence 6 5554 56799999 99999999998 88998762 246667432 1 123467889
Q ss_pred chhccccC-------CCcEEEEe-ec---CCcEEEEEcC--CCCcccCCCc--hhhH-HHHHHHHh
Q 007779 173 WPLLMRAL-------PPDVIFIA-DP---EGSIMGGGGS--IGPHYSGNDP--REMR-LVGALREV 222 (590)
Q Consensus 173 Hsl~v~~~-------p~~l~v~a-~~---~g~im~~~h~--~gvQfHPEs~--~~m~-L~~~L~kl 222 (590)
||+++..+ |+++.++| ++ |+.+||+++. ||||||||-. .+.+ +++|++..
T Consensus 150 HS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~~~i~GvQFHPE~s~~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 150 HSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENFLKQQ 215 (555)
T ss_dssp ESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEETTEEEESSBGGGSHHHHHHHHHHHHTTC
T ss_pred EEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEeCCEEEEEeCcEecChhHHHHHHHHHhcc
Confidence 99999532 56677887 54 5789999987 9999999963 3455 77777543
|
| >2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-13 Score=135.70 Aligned_cols=145 Identities=9% Similarity=-0.051 Sum_probs=96.1
Q ss_pred HHHHHh---CCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC--chh-hhhHHHHHHHH-hcC-CCC
Q 007779 60 ALIDQL---GLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR--EDE-AFKVLDTILRS-AKG-DLK 131 (590)
Q Consensus 60 ~~~~~l---g~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~--~~~-~g~~~~~~i~~-~~~-~~P 131 (590)
..|+.+ |.++.+++++ ++ ++.+|+|||+.||..... ..+ .....+. |++ +.. ++|
T Consensus 20 ~~l~~~~~~G~~~~~~~~~----~~------------l~~~dglil~GG~~~~~~~~~~~d~~~~~~~-i~~~~~~~g~P 82 (227)
T 2abw_A 20 NHFIKLQIPSLNIIQVRNV----HD------------LGLCDGLVIPGGESTTVRRCCAYENDTLYNA-LVHFIHVLKKP 82 (227)
T ss_dssp HHHHTTCCTTEEEEEECSH----HH------------HHTCSEEEECCSCHHHHHHHTTHHHHHHHHH-HHHHHHTSCCC
T ss_pred HHHHHhccCCeEEEEEcCc----cc------------cccCCEEEECCCcHHHHHHHHHHhHHHHHHH-HHHHHHhcCCE
Confidence 667777 8877777643 11 345699999888733210 001 1234566 555 456 799
Q ss_pred ccc-ccchHHHHhHhCceeeccCC---CCcC------------ccc----------cC-----CceeEEeccchhccccC
Q 007779 132 DEE-EVSKAQLGAFFSAMTIRANA---FPEA------------TQW----------SE-----GERRAMNTFWPLLMRAL 180 (590)
Q Consensus 132 ilG-CLGhQ~i~~~~G~~v~~~~~---~~~h------------G~~----------s~-----~~~~~~~ryHsl~v~~~ 180 (590)
+|| |+|+|.|+.++|+.+... . ..+- |.. .. |..|..+..|++.|..+
T Consensus 83 ilGIC~G~QlL~~~~gg~~~~~-~~~~~~~lG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~h~~~v~~~ 161 (227)
T 2abw_A 83 IWGTCAGCILLSKNVENIKLYS-NFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREI 161 (227)
T ss_dssp EEEETHHHHHTEEEEECCCSCC-TTGGGSCCCCEEEEEECCC----CCEEEEECEECCCCTTCCTTCEEEEESCCEEEEE
T ss_pred EEEECHHHHHHHHHhcCCcccc-ccccccccCceeEEEEecCCCccccccccccccccccccCCCceeEEEEEcceEeec
Confidence 999 999999999999975221 0 0000 100 00 34566677788888777
Q ss_pred -CCcEEEEe-ec-----CCcEEEEEcC--CCCcccCCCchhhH-HHHHHHHh
Q 007779 181 -PPDVIFIA-DP-----EGSIMGGGGS--IGPHYSGNDPREMR-LVGALREV 222 (590)
Q Consensus 181 -p~~l~v~a-~~-----~g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl 222 (590)
|++++++| ++ |+.++|++.. +|+|||||-....+ +++|++.+
T Consensus 162 ~~~~~~vla~~~~~~~g~~~~~a~~~~~v~gvQfHPE~~~~~~l~~~Fl~~~ 213 (227)
T 2abw_A 162 LSDEVKVLATFSHESYGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKV 213 (227)
T ss_dssp CCTTCEEEEEEEETTTEEEEEEEEEETTEEEESSCGGGSSCCHHHHHHHHHH
T ss_pred CCCCcEEEEEcccccCCCCceEEEEECCEEEEEECCeeCCCcHHHHHHHHHH
Confidence 99999999 54 6889999887 99999999744334 77777654
|
| >2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=112.74 Aligned_cols=128 Identities=9% Similarity=-0.086 Sum_probs=78.4
Q ss_pred cCCCeEEECCCCCCCCCchhh---hhHHHHHHHHh-cCCCCccc-ccchHHHHhHhCc-eeeccCCCCcCcccc------
Q 007779 95 EAQAKVCTGPTQTRPLREDEA---FKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSA-MTIRANAFPEATQWS------ 162 (590)
Q Consensus 95 ~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~-~v~~~~~~~~hG~~s------ 162 (590)
+.+||+||..||=.....++. ....++ ++.. ...+|+|| |+|||++..++|| ..... +.-.-|-..
T Consensus 98 ~~~DglIITGap~~~~~~ed~~yw~el~~l-i~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~-~~K~~Gv~~~~~~~~ 175 (301)
T 2vdj_A 98 EKFDGLIITGAPVETLSFEEVDYWEELKRI-MEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPL-KEKMFGVFEHEVREQ 175 (301)
T ss_dssp SCEEEEEECCCTTTTSCGGGSTTHHHHHHH-HHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE-EEEEEEEEEEEECCS
T ss_pred cccCEEEECCCCCcCCCcccCchHHHHHHH-HHHHHHcCCcEEEEcHHHHHHHHHhCCCccccC-CCCEEEEEEEEecCC
Confidence 568999999999554322233 234444 5554 34699999 9999996666655 33333 222222110
Q ss_pred -----CC--ceeEEe--cc---chhccccCCCcEEEEe-ecCCcEEEEEc---C-CCCcccCCCchhhHHHHHHHHhhcC
Q 007779 163 -----EG--ERRAMN--TF---WPLLMRALPPDVIFIA-DPEGSIMGGGG---S-IGPHYSGNDPREMRLVGALREVLAG 225 (590)
Q Consensus 163 -----~~--~~~~~~--ry---Hsl~v~~~p~~l~v~a-~~~g~im~~~h---~-~gvQfHPEs~~~m~L~~~L~kl~~G 225 (590)
.| ..|.+- || |...|..+| +++++| +++..+.+++. + +|||||||=....--..+.+.+.+|
T Consensus 176 ~~pL~~g~~~~f~~phsr~~~~~~~~v~~~p-ga~vLA~S~~~~~~~~~~~~~~~~~vQgHpEyd~~~l~~ey~rd~~~~ 254 (301)
T 2vdj_A 176 HVKLLQGFDELFFAVHSRHTEVRESDIREVK-ELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRDKG 254 (301)
T ss_dssp SCGGGTTCCSEEEEEEEEEEECCHHHHHTCT-TEEEEEEETTTEEEEEEEGGGTEEEECSCTTCCTTHHHHHHHHHHHHT
T ss_pred CCccccCCCCceEeeeEeccCcCHHHccCCC-CCEEEEeCCCCcceEEEecCCCEEEEECCCCCCHHHHHHHHHHHHHcc
Confidence 12 345443 44 556565665 899999 77777777765 2 9999999974443333455555554
|
| >2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.84 E-value=8.3e-09 Score=107.04 Aligned_cols=128 Identities=7% Similarity=-0.080 Sum_probs=76.8
Q ss_pred cCCCeEEECCCCCCCCCchhh---hhHHHHHHHHh-cCCCCccc-ccchHHHHhHhCc-eeeccCCCCcCcccc------
Q 007779 95 EAQAKVCTGPTQTRPLREDEA---FKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSA-MTIRANAFPEATQWS------ 162 (590)
Q Consensus 95 ~~~~~ivlspGPg~P~~~~~~---g~~~~~~i~~~-~~~~PilG-CLGhQ~i~~~~G~-~v~~~~~~~~hG~~s------ 162 (590)
+.+||+||..+|=.....++. ....++ ++.. ...+|+|| |+|||+++.++|| ..... +.-.-|-..
T Consensus 110 ~~~DglIITGsP~~~~~~ed~~yw~el~~l-i~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~-~~K~~Gv~~~~~~~~ 187 (312)
T 2h2w_A 110 RKFDGFIITGAPVELLPFEEVDYWEELTEI-MEWSRHNVYSTMFICWAAQAGLYYFYGIPKYEL-PQKLSGVYKHRVAKD 187 (312)
T ss_dssp CCEEEEEECCCSCTTSCGGGSTTHHHHHHH-HHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE-EEEEEEEEEEEESSC
T ss_pred cCcCEEEECCCCCCCCCCccCchHHHHHHH-HHHHHHcCCcEEEECHHHHHHHHHhCCCccccC-CCCEEEEEEEEEcCC
Confidence 568999999999654322233 234444 5544 34699999 9999996666666 33332 222222110
Q ss_pred ----C--CceeEEec--c---chhccccCCCcEEEEe-ecCCcEEEEEcC----CCCcccCCCchhhHHHHHHHHhhcC
Q 007779 163 ----E--GERRAMNT--F---WPLLMRALPPDVIFIA-DPEGSIMGGGGS----IGPHYSGNDPREMRLVGALREVLAG 225 (590)
Q Consensus 163 ----~--~~~~~~~r--y---Hsl~v~~~p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs~~~m~L~~~L~kl~~G 225 (590)
. +..|.+-. | |...|..+ ++++++| +++..+.+++.+ +|||||||=....--..+.+.+..|
T Consensus 188 ~pL~~g~~~~f~vphsr~~e~~~~~v~~~-pga~vLA~S~~~~~q~~~~~~~~~~~vQgHPEyd~~~l~~ey~rd~~~g 265 (312)
T 2h2w_A 188 SVLFRGHDDFFWAPHSRYTEVKKEDIDKV-PELEILAESDEAGVYVVANKSERQIFVTGHPEYDRYTLRDEYYRDIGRN 265 (312)
T ss_dssp CGGGTTCCSEEEEEEEEEEECCHHHHTTC-C-CEEEEEETTTEEEEEECSSSSEEEECSCTTCCTTHHHHHHHHHHHTT
T ss_pred CccccCCCCceEeeEEeccccCHHHccCC-CCCEEEEcCCCCcceEEEecCCCEEEEECCCCCCHHHHHHHHHHHHHcc
Confidence 1 23555543 3 33334444 4899999 777778888763 9999999974443333455555555
|
| >1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 | Back alignment and structure |
|---|
Probab=94.37 E-value=0.052 Score=51.55 Aligned_cols=110 Identities=8% Similarity=0.087 Sum_probs=64.3
Q ss_pred ccccccccccccccccccccccceeEeeccccH-------HHHHHhCCceEEEeCCC---CCccccccC-CCCCcccc--
Q 007779 27 HRRLQASRQFSSTDGNRLIGRRIRLTVKADLDS-------ALIDQLGLKESDIINPA---ISSSYRSSK-LPKPNQTL-- 93 (590)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~---~~~~~~~~~-~~~~~~~~-- 93 (590)
|.+|.+...+.... ..+|+.|++.+.|+. ..|+..|.++.++.-+. ++.+. .. ...++...
T Consensus 8 ~~~~~~~~~~~~~~----~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~--g~~~v~~~~~l~~ 81 (193)
T 1oi4_A 8 HHHLESTSLYKKAG----LSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKK--GEASVTIDKSIDE 81 (193)
T ss_dssp CCSCCTTCTTTTTT----CCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTT--SSCEEECCEEGGG
T ss_pred cccccccceehhhc----cCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCcceecCC--CCeEEECCCChHH
Confidence 44555544554432 234567777777763 55777899998887653 21110 00 00011110
Q ss_pred --ccCCCeEEECCCCCCCCCchhhhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 94 --LEAQAKVCTGPTQTRPLREDEAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 94 --~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
.+.+|.||+-.|+| +.+..+.....+. |++ +....|+.| |.|.|.|+.+
T Consensus 82 ~~~~~~D~livpGG~~-~~~l~~~~~l~~~-l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 82 VTPAEFDALLLPGGHS-PDYLRGDNRFVTF-TRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp CCGGGCSEEEECCBTH-HHHHTTSHHHHHH-HHHHHHTTCCEEEETTTHHHHHHH
T ss_pred CCcccCCEEEECCCcC-HHHhhhCHHHHHH-HHHHHHcCCEEEEECHHHHHHHHC
Confidence 23579999988865 3311123456777 665 456799999 9999999986
|
| >3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=93.90 E-value=0.019 Score=55.80 Aligned_cols=71 Identities=8% Similarity=-0.044 Sum_probs=43.5
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh------HHHHHHHH-hcCCCCc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK------VLDTILRS-AKGDLKD 132 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~------~~~~~i~~-~~~~~Pi 132 (590)
+.|+.+|+++.+++-..-+.++. ...+...|+|++ || |+.. .+.. ..+. |++ +...+|+
T Consensus 51 ~a~~~lG~~v~~~~i~~~~~~~~--------~~~l~~ad~I~l-~G-G~~~---~l~~~L~~~gl~~~-l~~~~~~G~p~ 116 (206)
T 3l4e_A 51 KALESLGLLVEELDIATESLGEI--------TTKLRKNDFIYV-TG-GNTF---FLLQELKRTGADKL-ILEEIAAGKLY 116 (206)
T ss_dssp HHHHHTTCEEEECCTTTSCHHHH--------HHHHHHSSEEEE-CC-SCHH---HHHHHHHHHTHHHH-HHHHHHTTCEE
T ss_pred HHHHHcCCeEEEEEecCCChHHH--------HHHHHhCCEEEE-CC-CCHH---HHHHHHHHCChHHH-HHHHHHcCCeE
Confidence 67889999988874111111100 011444588998 67 7764 2221 3455 444 4456999
Q ss_pred cc-ccchHHHHhH
Q 007779 133 EE-EVSKAQLGAF 144 (590)
Q Consensus 133 lG-CLGhQ~i~~~ 144 (590)
+| |+|.|.++..
T Consensus 117 ~G~sAGa~~l~~~ 129 (206)
T 3l4e_A 117 IGESAGAVITSPN 129 (206)
T ss_dssp EEETHHHHTTSSB
T ss_pred EEECHHHHHhccc
Confidence 99 9999999763
|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* | Back alignment and structure |
|---|
Probab=91.33 E-value=0.12 Score=62.84 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=52.2
Q ss_pred cccceeEeec----cccH---HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhh--
Q 007779 46 GRRIRLTVKA----DLDS---ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAF-- 116 (590)
Q Consensus 46 ~~~~~~~~~~----~~d~---~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g-- 116 (590)
+.|+++.+++ |.|- +-|+..|.++.++....+... + ..++.+|+|||..|-...+.. .+|
T Consensus 1045 ~~~pkVaIi~~~G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~--------~--~~l~~~d~lvlPGGfSygD~l-~~g~~ 1113 (1303)
T 3ugj_A 1045 GARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGG--------R--IGLGNFHALVACGGFSYGDVL-GAGEG 1113 (1303)
T ss_dssp TCCCEEEEEECTTCCCHHHHHHHHHHTTCEEEEEEHHHHHTT--------S--CCGGGCSEEEECCSCGGGGTT-STTHH
T ss_pred CCCCEEEEEecCCcCCHHHHHHHHHHhCCceEEEeecccccC--------c--ccHhhCCEEEECCCCcchhhh-ccchh
Confidence 3466777776 4433 567888998886642111000 0 015567999998885433211 111
Q ss_pred ---------hHHHHHHHH-h-cCCCCccc-ccchHHHHhH
Q 007779 117 ---------KVLDTILRS-A-KGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 117 ---------~~~~~~i~~-~-~~~~PilG-CLGhQ~i~~~ 144 (590)
.+.+. +++ + ....|+|| |+|+|.|.+.
T Consensus 1114 ~a~~~l~~~~l~~~-l~~~~~~~g~pvLGICnG~QlL~e~ 1152 (1303)
T 3ugj_A 1114 WAKSILFNHRVRDE-FETFFHRPQTLALGVCNGCQMMSNL 1152 (1303)
T ss_dssp HHHHHHTSHHHHHH-HHHHHHSSSCEEEEETHHHHHHHTT
T ss_pred HHHHHHhchhHHHH-HHHHHHhCCCcEEEECHHHHHHHHh
Confidence 23344 554 3 35799999 9999999987
|
| >1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A | Back alignment and structure |
|---|
Probab=91.06 E-value=0.05 Score=53.45 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=44.3
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh------HHHHHHHH-h
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK------VLDTILRS-A 126 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~------~~~~~i~~-~ 126 (590)
+++| +.|+.+|+++.+++.-+-..+. ++..|+|+++. |+.. .+.. ..+. |++ +
T Consensus 49 ~~~~~~~al~~lG~~~~~v~~~~d~~~~------------l~~ad~I~lpG--G~~~---~~~~~l~~~gl~~~-l~~~~ 110 (229)
T 1fy2_A 49 YTDKTAEVLAPLGVNVTGIHRVADPLAA------------IEKAEIIIVGG--GNTF---QLLKESRERGLLAP-MADRV 110 (229)
T ss_dssp HHHHHHHHHGGGTCEEEETTSSSCHHHH------------HHHCSEEEECC--SCHH---HHHHHHHHTTCHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeccccHHHH------------HhcCCEEEECC--CcHH---HHHHHHHHCChHHH-HHHHH
Confidence 3444 6788899988877631000011 33447777755 6654 3222 3445 443 4
Q ss_pred cCCCCccc-ccchHHHHhHh
Q 007779 127 KGDLKDEE-EVSKAQLGAFF 145 (590)
Q Consensus 127 ~~~~PilG-CLGhQ~i~~~~ 145 (590)
...+|++| |+|.|.++...
T Consensus 111 ~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 111 KRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HTTCEEEEETHHHHHTSSBS
T ss_pred HcCCEEEEECHHHHhhcccc
Confidence 45699999 99999998854
|
| >3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A | Back alignment and structure |
|---|
Probab=89.60 E-value=0.29 Score=44.88 Aligned_cols=97 Identities=8% Similarity=-0.084 Sum_probs=57.2
Q ss_pred cccceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCcccc----ccCCCeEEECCCCCCCCCchh
Q 007779 46 GRRIRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTL----LEAQAKVCTGPTQTRPLREDE 114 (590)
Q Consensus 46 ~~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~----~~~~~~ivlspGPg~P~~~~~ 114 (590)
++|+.+++.+.|+. ..|++.|.++.++--+.-.+.........++... .+.+|.|++-.|+| |....+
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~~~~ 80 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGKA-PEIVRL 80 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBSH-HHHHTT
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCCEEecCCCcEEeccCChhHCCHhhCCEEEECCCcC-HHHhcc
Confidence 45778888888887 5667778888877544211100000000011111 12479999977775 321112
Q ss_pred hhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 115 AFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 115 ~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
...+.+. +++ +....||.+ |-|.+.|+.+
T Consensus 81 ~~~l~~~-l~~~~~~~k~i~aiC~G~~~La~a 111 (168)
T 3l18_A 81 NEKAVMI-TRRMFEDDKPVASICHGPQILISA 111 (168)
T ss_dssp CHHHHHH-HHHHHHTTCCEEEETTTHHHHHHT
T ss_pred CHHHHHH-HHHHHHCCCEEEEECHhHHHHHHC
Confidence 3446777 655 455799999 9999999875
|
| >2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... | Back alignment and structure |
|---|
Probab=85.88 E-value=0.64 Score=43.83 Aligned_cols=95 Identities=13% Similarity=0.062 Sum_probs=59.1
Q ss_pred ccceeEeeccccH-------HHHHHhCCceEEEeCC---CCCccccccCCCCCcccc--c---cCCCeEEECCCCCCCCC
Q 007779 47 RRIRLTVKADLDS-------ALIDQLGLKESDIINP---AISSSYRSSKLPKPNQTL--L---EAQAKVCTGPTQTRPLR 111 (590)
Q Consensus 47 ~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd---~~~~~~~~~~~~~~~~~~--~---~~~~~ivlspGPg~P~~ 111 (590)
+|+.|++.+.|+. ..|++.|.++.++--+ .+..+. .....++... . +.+|.||+-.|++.+.+
T Consensus 4 ~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~--g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~ 81 (197)
T 2rk3_A 4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSR--DVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN 81 (197)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTT--SCEECCSEEHHHHHTTCCCSEEEECCCHHHHHH
T ss_pred CEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCC--CCEEeCCcCHHHcCCccCCCEEEECCCchhHHH
Confidence 4667888888876 5577779988888643 121110 0001121111 2 46799999988754432
Q ss_pred chhhhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 112 EDEAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 112 ~~~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
..+.....+. +++ +....||.+ |-|-+.|+.+
T Consensus 82 l~~~~~~~~~-l~~~~~~gk~i~aiC~G~~~La~a 115 (197)
T 2rk3_A 82 LSESAAVKEI-LKEQENRKGLIATICAGPTALLAH 115 (197)
T ss_dssp HHHCHHHHHH-HHHHHHTTCEEEEETTTHHHHHHT
T ss_pred hhhCHHHHHH-HHHHHHcCCEEEEECHHHHHHHHC
Confidence 2233456777 665 445689999 9999999876
|
| >2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=85.17 E-value=0.64 Score=43.37 Aligned_cols=97 Identities=10% Similarity=0.029 Sum_probs=56.7
Q ss_pred ccceeEeeccccH-------HHHHHhCCceEEEeCCC--CCccc---cccCCCCCcccc----ccCCCeEEECCCCCCCC
Q 007779 47 RRIRLTVKADLDS-------ALIDQLGLKESDIINPA--ISSSY---RSSKLPKPNQTL----LEAQAKVCTGPTQTRPL 110 (590)
Q Consensus 47 ~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~--~~~~~---~~~~~~~~~~~~----~~~~~~ivlspGPg~P~ 110 (590)
+|+.|++.+.|+. ..|++.|.++.++--+. +.... .......++..+ .+.+|.||+-.|++.+.
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~~ 89 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPGEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNPD 89 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSSEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhHH
Confidence 4667777787764 45777788888776542 21100 000000111111 13579999998875443
Q ss_pred CchhhhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 111 REDEAFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 111 ~~~~~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
+..+.....+. +++ +....||.+ |-|-+.|+.+
T Consensus 90 ~~~~~~~l~~~-l~~~~~~gk~i~aiC~G~~~La~a 124 (190)
T 2vrn_A 90 KLRLEEGAMKF-VRDMYDAGKPIAAICHGPWSLSET 124 (190)
T ss_dssp HHTTCHHHHHH-HHHHHHTTCCEEEC-CTTHHHHHT
T ss_pred HHhhCHHHHHH-HHHHHHcCCEEEEECHhHHHHHhC
Confidence 21123456777 665 455689999 9999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 590 | ||||
| d1o17a2 | 273 | c.27.1.1 (A:71-343) Anthranilate phosphoribosyltra | 2e-19 | |
| d1khda2 | 264 | c.27.1.1 (A:81-344) Anthranilate phosphoribosyltra | 7e-18 | |
| d2elca2 | 264 | c.27.1.1 (A:66-329) Anthranilate phosphoribosyltra | 6e-16 | |
| d1uoua2 | 273 | c.27.1.1 (A:101-373) Thymidine phosphorylase {Huma | 1e-06 | |
| d2tpta2 | 265 | c.27.1.1 (A:71-335) Thymidine phosphorylase {Esche | 2e-06 | |
| d1o17a1 | 70 | a.46.2.1 (A:1-70) Anthranilate phosphoribosyltrans | 4e-05 | |
| d2elca1 | 52 | a.46.2.1 (A:1-52) Anthranilate phosphoribosyltrans | 2e-04 | |
| d1brwa1 | 70 | a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphoryl | 2e-04 | |
| d1khda1 | 69 | a.46.2.1 (A:12-80) Anthranilate phosphoribosyltran | 4e-04 | |
| d1brwa2 | 260 | c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphor | 6e-04 |
| >d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 86.3 bits (213), Expect = 2e-19
Identities = 42/293 (14%), Positives = 96/293 (32%), Gaps = 39/293 (13%)
Query: 300 GEPYDGNTRFFRSTL--FVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLS 357
G DG ST + ++ HG + K G + +L+ +G + +
Sbjct: 9 GTGGDGLGTVNVSTASAILLSL----VNPVAKHGNRAVSGKSGSAD--VLEALGYNIIVP 62
Query: 358 VLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREA 417
+AKEL+ + F ++ + P++ ++ +R+ + R + A+
Sbjct: 63 PERAKELVN--KTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAK---Y 117
Query: 418 IVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFR 477
+ G + + + + L + ++V GE G + G
Sbjct: 118 QLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEV----------------SPIGNT 161
Query: 478 SLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTY 537
+ + S + V + ++ N+ + + A G+
Sbjct: 162 FMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAE------DSAIKIVRAFLGKDEHVA 215
Query: 538 DRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKLK 590
+ I +N + L D D + A I+ +L +L I ++ +
Sbjct: 216 EFIKINTAVA--LFALDRVGDFREGYEYADHLIEK--SLDKLNEIISMNGDVT 264
|
| >d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Pectobacterium carotovorum [TaxId: 554]
Score = 81.5 bits (200), Expect = 7e-18
Identities = 41/280 (14%), Positives = 80/280 (28%), Gaps = 32/280 (11%)
Query: 300 GEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVL 359
G DG ST A V + G HG + + + +L+ G ++S
Sbjct: 11 GTGGDGTNSINISTA-SAFVAASCGAKVAKHGNRSVCQPLAGSCD-LLQAFGIRLDMSAE 68
Query: 360 QAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIV 419
+++ L+ ++ ++ + + +R+ +K R + R +
Sbjct: 69 DSRQALD--DLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARP---PKAL 123
Query: 420 AGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSL 479
G Y P+ +K G + VV G G + + A
Sbjct: 124 IGVYSPELVLPIAQALKVLGYKNAAVVHGG-GMDEVAIHTPTQVAELNNGEIESYQLS-- 180
Query: 480 NVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDR 539
+ G P + + +
Sbjct: 181 ----------PQDFGLQSYSLNALQGGTPEENRDILARLLQG---------KGDAAHARQ 221
Query: 540 IVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRL 579
+ N + LL G +++ A E I SG A +R+
Sbjct: 222 VAANVAL---LLKLFGQDNLRHNAQLALETIRSGTAFERV 258
|
| >d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Thermus thermophilus [TaxId: 274]
Score = 75.7 bits (185), Expect = 6e-16
Identities = 52/300 (17%), Positives = 86/300 (28%), Gaps = 46/300 (15%)
Query: 289 PVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLK 348
P+ D G DG STL A V + G + HG + G +L+
Sbjct: 7 PLLD----IV-GTGGDGKGLMNLSTL-AALVAAAGGVAVAKHGNRAASSRAGS--ADLLE 58
Query: 349 FMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQ 408
+G + E +E E+GF ++ R P++ + +R + R +
Sbjct: 59 ALGVDLEAPPERVGEAIE--ELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTN 116
Query: 409 FVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGL 468
A V G + + P+ ++R G +V L +
Sbjct: 117 PAGADA---YVLGVFSPEWLAPMAEALERLGARGLVVHGEGADELVLGENRV-------- 165
Query: 469 PVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFE--PTNTPRADRSVSKNIELGL 526
V + G + P +
Sbjct: 166 ---------------------VEVGKGAYALTPEEVGLKRAPLEALKGGGPEENAALARR 204
Query: 527 AALRGEKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKIS 586
EKGP D + L AG + + ARE + SG+A L Y+
Sbjct: 205 LLKGEEKGPLADAVALAAGAG--FYAAGKTPSLKEGVALAREVLASGEAYLLLERYVAFL 262
|
| >d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Thymidine phosphorylase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 1e-06
Identities = 42/274 (15%), Positives = 69/274 (25%), Gaps = 49/274 (17%)
Query: 311 RSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370
+ +L +A + G + + GG T +++ G + S Q + LL+ +
Sbjct: 24 KVSLVLAPALAACGCKVPMISGRGLGHTGG-TLDKLESIPGFNVIQSPEQMQVLLD--QA 80
Query: 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEP 430
G V S + R AT + + I A + E
Sbjct: 81 GCCIVG-----QSEQLVPADGILYAARDVTATVDSLPL---------ITASILSKKLVEG 126
Query: 431 LLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGV 490
L L+ V +E A + SL +
Sbjct: 127 LSALVVDVKFGGAAVFPNQEQARELAK-------------TLVGVGASLGLRVAAA---- 169
Query: 491 SRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHL 550
R + E L D + G + L
Sbjct: 170 -------------LTAMDKPLGRCVGHALEVEEALLCMDGAGPPDLRDLVTTLGGALLWL 216
Query: 551 LGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIK 584
G A + R A+D G AL R +
Sbjct: 217 SG--HAGTQAQGAARVAAALDDGSALGRFERMLA 248
|
| >d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Thymidine phosphorylase species: Escherichia coli [TaxId: 562]
Score = 47.4 bits (112), Expect = 2e-06
Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 48/274 (17%)
Query: 311 RSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370
++L + + + G + + GG T +++ G + +E+++ +
Sbjct: 23 VTSLMLGPMVAACGGYIPMISGRGLGHTGG-TLDKLESIPGFDIFPDDNRFREIIK-DVG 80
Query: 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEP 430
P+ R+ S + A + E
Sbjct: 81 VAIIGQTSSLAPADKRFYATRD----ITATVDSIPLI-----------TASILAKKLAEG 125
Query: 431 LLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGV 490
L L+ V SG + E + ++ + V G+ T +
Sbjct: 126 LDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTA---------LLTDMNQVL 176
Query: 491 SRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTYDRIVLNAGMVDHL 550
+ + N + + L GE V A V+ L
Sbjct: 177 ASSAGNAV----------------------EVREAVQFLTGEYRNPRLFDVTMALCVEML 214
Query: 551 LGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIK 584
+ A+D + A + + +D+GKA + +
Sbjct: 215 ISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVA 248
|
| >d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 70 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 39.7 bits (93), Expect = 4e-05
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDR 272
M + L++++ L E + + + ++ + V E L+SA L+ RM E+
Sbjct: 1 MNINEILKKLINKSDLEINEAEELAKAII----RGE---VPEILVSAILVALRMKGESKN 53
Query: 273 ELKAYCLA 280
E+ + A
Sbjct: 54 EIVGFARA 61
|
| >d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 52 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Thermus thermophilus [TaxId: 274]
Score = 37.3 bits (87), Expect = 2e-04
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDREL 274
A+++ + G L EE V+R ++ + S + L+ + E E+
Sbjct: 3 AVKKAILGEVLEEEEAYEVMRALM----AGEV---SPVRAAGLLVALSLRGERPHEI 52
|
| >d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 70 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Pyrimidine nucleoside phosphorylase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 37.8 bits (88), Expect = 2e-04
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDR 272
MR+V + + G L EE++ ++R + + + +SA + T+
Sbjct: 1 MRMVDLIAKKRDGKALTKEEIEWIVRGYT----NGD---IPDYQMSALAMAIYFRGMTEE 53
Query: 273 ELKAYCLA 280
E A +A
Sbjct: 54 ETAALTMA 61
|
| >d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 69 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Pectobacterium carotovorum [TaxId: 554]
Score = 37.0 bits (86), Expect = 4e-04
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Query: 219 LREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYC 278
L ++ + EE + ++ + + +S L+A LI +M E E+
Sbjct: 6 LEKLFKSQSMTQEESHQLFAAIV----RGE---LEDSQLAAALISMKMRGERPEEIAGAA 58
Query: 279 LAFDDELGPPP 289
A + P P
Sbjct: 59 SALLADAQPFP 69
|
| >d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Pyrimidine nucleoside phosphorylase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 39.7 bits (92), Expect = 6e-04
Identities = 18/167 (10%), Positives = 39/167 (23%), Gaps = 32/167 (19%)
Query: 418 IVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFR 477
I + + ++ +G +K + A + + + G
Sbjct: 110 IASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEARRLARVMVDIGKRVGRRTMAV---- 165
Query: 478 SLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALRGEKGPTY 537
+S S L N + E
Sbjct: 166 ------------ISDMSQPLGYAVGNAL--------------EVKEAIETLKGNGPHDLT 199
Query: 538 DRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIK 584
+ + + + + A + A EAI SG A+ ++
Sbjct: 200 ELCLTLGSHM--VYLAEKAPSLDEARRLLEEAIRSGAAIAAFKTFLA 244
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 590 | |||
| d1o17a2 | 273 | Anthranilate phosphoribosyltransferase (TrpD) {Arc | 100.0 | |
| d2elca2 | 264 | Anthranilate phosphoribosyltransferase (TrpD) {The | 100.0 | |
| d1khda2 | 264 | Anthranilate phosphoribosyltransferase (TrpD) {Pec | 100.0 | |
| d1brwa2 | 260 | Pyrimidine nucleoside phosphorylase {Bacillus stea | 100.0 | |
| d1uoua2 | 273 | Thymidine phosphorylase {Human (Homo sapiens) [Tax | 100.0 | |
| d2tpta2 | 265 | Thymidine phosphorylase {Escherichia coli [TaxId: | 100.0 | |
| d1qdlb_ | 195 | Anthranilate synthase GAT subunit, TrpG {Archaeon | 99.97 | |
| d1a9xb2 | 228 | Carbamoyl phosphate synthetase, small subunit C-te | 99.97 | |
| d1i7qb_ | 192 | Anthranilate synthase GAT subunit, TrpG {Serratia | 99.97 | |
| d1wl8a1 | 188 | GMP synthase subunit A, GuaAA {Archaeon Pyrococcus | 99.95 | |
| d2a9va1 | 196 | GMP synthase subunit A, GuaAA {Archaeon Thermoplas | 99.94 | |
| d1gpma2 | 205 | GMP synthetase {Escherichia coli [TaxId: 562]} | 99.93 | |
| d1o1ya_ | 230 | Hypothetical protein TM1158 {Thermotoga maritima [ | 99.83 | |
| d1k9vf_ | 200 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.74 | |
| d1jvna2 | 232 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.73 | |
| d1ka9h_ | 195 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.67 | |
| d1khda1 | 69 | Anthranilate phosphoribosyltransferase (TrpD) {Pec | 99.67 | |
| d1o17a1 | 70 | Anthranilate phosphoribosyltransferase (TrpD) {Arc | 99.66 | |
| d1brwa1 | 70 | Pyrimidine nucleoside phosphorylase {Bacillus stea | 99.64 | |
| d2nv0a1 | 195 | Hypothetical protein YaaE {Bacillus subtilis [TaxI | 99.61 | |
| d1uoua1 | 68 | Thymidine phosphorylase {Human (Homo sapiens) [Tax | 99.59 | |
| d1q7ra_ | 202 | Hypothetical protein YaaE {Bacillus stearothermoph | 99.58 | |
| d2tpta1 | 70 | Thymidine phosphorylase {Escherichia coli [TaxId: | 99.58 | |
| d1l9xa_ | 288 | gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta | 99.52 | |
| d2elca1 | 52 | Anthranilate phosphoribosyltransferase (TrpD) {The | 99.47 | |
| d2abwa1 | 218 | Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p | 99.19 | |
| d2ghra1 | 281 | Homoserine O-succinyltransferase HTS (MetA) {Bacil | 99.01 | |
| d1s1ma1 | 258 | CTP synthase PyrG, C-terminal domain {Escherichia | 98.75 | |
| d1vcoa1 | 250 | CTP synthase PyrG, C-terminal domain {Thermus ther | 98.67 | |
| d1sy7a1 | 184 | Catalase, C-terminal domain {Neurospora crassa [Ta | 94.68 | |
| d1p80a1 | 156 | Catalase, C-terminal domain {Escherichia coli, HPI | 91.03 |
| >d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=2.5e-65 Score=520.83 Aligned_cols=259 Identities=16% Similarity=0.184 Sum_probs=235.6
Q ss_pred CCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCceE
Q 007779 294 KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFA 373 (590)
Q Consensus 294 ~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf~ 373 (590)
+.||+|||||||.+|||+||+ +|+|+|++| ||+|||||++|||+|| +|+||+|||++++++++++++|++ .||+
T Consensus 3 ~~~D~~GTGgDg~~t~NiSt~-~a~v~a~~g-~VaKHGnr~~ssk~GS--aDvLe~LGi~~~~~~~~~~~~l~~--~g~~ 76 (273)
T d1o17a2 3 NAIDTAGTGGDGLGTVNVSTA-SAILLSLVN-PVAKHGNRAVSGKSGS--ADVLEALGYNIIVPPERAKELVNK--TNFV 76 (273)
T ss_dssp TCEECCC----CCCBCCHHHH-HHHHHTTTS-CEEEEECCCSSSSCSH--HHHHHHHTBCCCCCHHHHHHHHHH--HSEE
T ss_pred CccccCcCCCCCCCCcchhHH-HHHHHhcCC-cEEEECCCCCCCCcCH--HHHHHHcCCCCCCCHHHHHHHHHH--cCce
Confidence 369999999999999999998 999999998 9999999999999999 999999999999999999999999 5666
Q ss_pred eecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCcc
Q 007779 374 YVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGAL 453 (590)
Q Consensus 374 fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~~ 453 (590)
|+|+|.|||+|++++++|++||+||++++...+ +||+++++||+||||++|.++|+++++.+|.++++||||.||+|
T Consensus 77 FlfAp~~hPamk~v~~vRk~Lg~rTiFN~lgPL---~NPa~~~~qliGv~~~~~~~~~a~~l~~lg~~~a~vv~G~dG~D 153 (273)
T d1o17a2 77 FLFAQYYHPAMKNVANVRKTLGIRTIFNILGPL---TNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGID 153 (273)
T ss_dssp EEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGG---CCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEETTTBS
T ss_pred EeeccccChHHHHHHHHHHHcCCCchhhhhhhc---cCCcCcceeeeccccHHHHHHHHHHHHhhcccceEEecCCcccc
Confidence 788999999999999999999999988888764 78999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCC
Q 007779 454 SMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRG 531 (590)
Q Consensus 454 els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G 531 (590)
|+++.+ +|.+++ .+|.+++ ++|+|+|||+++.+++++ ++++++|+++++++|+|
T Consensus 154 Eis~~g---------------------~t~v~~~~~g~i~~---~~i~P~d~Gl~~~~~~~l~gg~~~ena~~i~~il~G 209 (273)
T d1o17a2 154 EVSPIG---------------------NTFMKIVSKRGIEE---VKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLG 209 (273)
T ss_dssp SCCSSS---------------------EEEEEEEETTEEEE---EEEEGGGGTCCCCCGGGTBCSSHHHHHHHHHHHHHT
T ss_pred chhccc---------------------cceeeeccccccee---eeeehhhhcccccccccccccCchHHHHHHHHHHcC
Confidence 998653 466665 4777654 999999999999988876 78999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhccC
Q 007779 532 EKGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHKL 589 (590)
Q Consensus 532 ~~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~~ 589 (590)
++++.+|.|++|||++||++| +++|++||+++|+++|+| |++||++|+++++++
T Consensus 210 ~~~~~~d~V~lNAA~aL~~~g--~~~sl~eg~~~A~e~I~s--a~~kL~~li~~s~~l 263 (273)
T d1o17a2 210 KDEHVAEFIKINTAVALFALD--RVGDFREGYEYADHLIEK--SLDKLNEIISMNGDV 263 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHTT--HHHHHHHHHHHSBCH
T ss_pred CCcHHHHHHHHHHHHHHHHcC--CcCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 999999999999999999986 789999999999999996 578999999999875
|
| >d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.5e-55 Score=440.16 Aligned_cols=256 Identities=23% Similarity=0.308 Sum_probs=229.0
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccCce
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~gf 372 (590)
.++||+|||||||.+|||+||+ +|+|+|++|+||+|||||++|+++|| +|+||+||+++++++++++++|++ .||
T Consensus 6 ~~~vD~~gTGGdg~~t~niSt~-~a~vlAa~G~~V~khG~r~~~~~~Gs--~D~le~lG~~~~~~~~~~~~~l~~--~g~ 80 (264)
T d2elca2 6 RPLLDIVGTGGDGKGLMNLSTL-AALVAAAGGVAVAKHGNRAASSRAGS--ADLLEALGVDLEAPPERVGEAIEE--LGF 80 (264)
T ss_dssp SSEEEEEECCCCSSCCCCCHHH-HHHHHHHTTCEEEEEECCCTTTTCSH--HHHHHHTTCCTTCCHHHHHHHHHH--HSE
T ss_pred CCceeecCCCCCCCCCEeehHH-HHHHHHhCCCeEEEECCCCCCcccCH--HHHHhhccCCcccChHHHHHHHHh--ccc
Confidence 4689999999999999999998 99999999999999999999999999 999999999999999999999999 566
Q ss_pred EeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCCCc
Q 007779 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA 452 (590)
Q Consensus 373 ~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~eG~ 452 (590)
+|+++|.|||+|++++++|+++|+||++++.+.+ +||+.+.++++||||+++.++++++++.++. ++++|+|.+|.
T Consensus 81 ~f~~a~~~~Pa~k~l~~lR~~lg~rt~~n~l~~l---~nP~~~~~~~~gv~~~~~~~~~~~~~~~l~~-~~~vv~~~~g~ 156 (264)
T d2elca2 81 GFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPL---TNPAGADAYVLGVFSPEWLAPMAEALERLGA-RGLVVHGEGAD 156 (264)
T ss_dssp EEEEHHHHCGGGGGTHHHHHHHCSCCHHHHHTTT---CCTTCCCEEEEECSSGGGHHHHHHHHHHTTC-EEEEEEETTBS
T ss_pred eeeeccccCcHHHHHHHHHHHcCcCCchHHHHhh---cCcccchhhcccccchhhcchhhhhhhcccc-cceeeeccccc
Confidence 6777999999999999999999999977776654 6778888999999999999999999999975 78889988887
Q ss_pred cccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHHHCC
Q 007779 453 LSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAALRG 531 (590)
Q Consensus 453 ~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~vL~G 531 (590)
++.+... ....... ..+.++|++||+...+++++ +.++++|++++.++|.|
T Consensus 157 ~~~~~~~-----------------------~~~~~~~-----~~~~i~P~~~g~~~~~~~~l~~~~~~~~~~~~~~~l~g 208 (264)
T d2elca2 157 ELVLGEN-----------------------RVVEVGK-----GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKG 208 (264)
T ss_dssp SCCSSCE-----------------------EEEETTT-----EEEEECGGGGTCCCCCGGGGCCCSHHHHHHHHHHHHTT
T ss_pred ccccccc-----------------------eEEEecc-----ccccccHHHcCCCCCCHHHccCCChhhhhhhhhhhccc
Confidence 7654321 1112221 13789999999999888875 67999999999999999
Q ss_pred C-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhc
Q 007779 532 E-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISH 587 (590)
Q Consensus 532 ~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~ 587 (590)
+ +++.+|.|++|||++||++| ++.|++||+++|+++|+||+|+++|++|+++++
T Consensus 209 ~~~~~~~d~v~lnAa~~L~~~G--~~~~l~eg~~~a~~~I~sG~A~~~l~~~i~~~~ 263 (264)
T d2elca2 209 EEKGPLADAVALAAGAGFYAAG--KTPSLKEGVALAREVLASGEAYLLLERYVAFLR 263 (264)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHc
Confidence 7 68899999999999999986 789999999999999999999999999999987
|
| >d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Pectobacterium carotovorum [TaxId: 554]
Probab=100.00 E-value=1.6e-53 Score=429.17 Aligned_cols=259 Identities=17% Similarity=0.251 Sum_probs=225.4
Q ss_pred CCCCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhcCCCCCCCHHHHHHHHHhccC
Q 007779 291 ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370 (590)
Q Consensus 291 ~~~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaLGi~i~~s~e~a~~~Le~~g~ 370 (590)
++.+.+|+|||||||.+|||+||+ +|+|+|++|+||+|||||++||++|++ +|++|.+|+++++++++++++|++ .
T Consensus 2 ~~~~~~D~~gTGGdg~~t~niS~~-~a~ilAa~G~~V~khG~r~~~s~~g~~-~dl~~~~G~~~~~s~~~~~~~l~~--~ 77 (264)
T d1khda2 2 PDYDFADIVGTGGDGTNSINISTA-SAFVAASCGAKVAKHGNRSVCQPLAGS-CDLLQAFGIRLDMSAEDSRQALDD--L 77 (264)
T ss_dssp CSSCCEEEEECCCCSSCBCCCHHH-HHHHHHHHTCCEEEEECC----------CHHHHHTTCCTTCCHHHHHHHHHH--H
T ss_pred CCCCcccccCCCCCCCCCEeehHH-HHHHHHhCCCcEEeECCCCCCCCCcHH-HHHHHccCCcccchHHHHHHHHHh--c
Confidence 356789999999999999999998 999999999999999999999998743 899999999999999999999999 5
Q ss_pred ceEeecchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCC
Q 007779 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450 (590)
Q Consensus 371 gf~fl~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~e 450 (590)
||+|+++|.|||+|++++++|+++|+||++++...+ +||.++.+|++||||+++...+++++..+|.++++|++| |
T Consensus 78 g~~f~~a~~~~pa~~~l~~~R~~lg~rt~~n~l~~l---~np~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~~vv~g-~ 153 (264)
T d1khda2 78 NVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPL---INPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG-G 153 (264)
T ss_dssp SEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEEE-T
T ss_pred Cceeehhhhcchhhhhhhhhheeccccccccchhhh---cCcccchhhhheecChhhhhhHHHHhhcccccccceeec-c
Confidence 666677999999999999999999999988887765 688999999999999999999999999999999999999 8
Q ss_pred CccccccccccccccCCCCccccccccccCcceeEe-cCCcEEeeeeEEEecCCCCCCCCCCCcc-CCCHHHHHHHHHHH
Q 007779 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFE-GDGVSRQSFNLEVNASNYGFEPTNTPRA-DRSVSKNIELGLAA 528 (590)
Q Consensus 451 G~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~-~~g~~~~~~~~~i~P~d~Gl~~~~~~~~-~~~~~~na~~~~~v 528 (590)
|+||++... ++.+++ .++.+. .+.++|++||+........ +.++++|++.+..+
T Consensus 154 G~de~s~~~---------------------~~~v~~l~~~~~~---~~~i~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 209 (264)
T d1khda2 154 GMDEVAIHT---------------------PTQVAELNNGEIE---SYQLSPQDFGLQSYSLNALQGGTPEENRDILARL 209 (264)
T ss_dssp TBSSCCSSS---------------------CEEEEEEETTEEE---EEEECGGGGTCCCBCGGGGBCCSHHHHHHHHHHH
T ss_pred cceeccccC---------------------CcEEEEEeccccc---eeEEecccccccccccccccCCCHHHHHHHHHHH
Confidence 999988553 345554 466554 4899999999998876654 68999999999999
Q ss_pred HCCCC-CchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHH
Q 007779 529 LRGEK-GPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIK 584 (590)
Q Consensus 529 L~G~~-~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~ 584 (590)
|.|+. ++.+|.|++|||++||+.| ++|++||+++|+++|+||+|++||++|++
T Consensus 210 l~g~~~~~~~~~v~lnAa~~L~~~g---~~s~~eg~~~A~~~i~sG~A~~kl~~lvA 263 (264)
T d1khda2 210 LQGKGDAAHARQVAANVALLLKLFG---QDNLRHNAQLALETIRSGTAFERVTALAA 263 (264)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHTTT---CCCHHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred HcCCCChHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHhCcHHHHHHHHHhc
Confidence 99984 5688999999999999865 58999999999999999999999999984
|
| >d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Pyrimidine nucleoside phosphorylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=8.9e-49 Score=396.33 Aligned_cols=233 Identities=13% Similarity=0.108 Sum_probs=196.0
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhccCc
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEIG 371 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g~g 371 (590)
..+||+|||||||. |+||+ +|||+|++|+||+|||||++||+||| +|+||+| ||+++++|++++++|++ .|
T Consensus 6 g~~vD~cGTGGdG~---niST~-~a~V~AaaGv~VaKHGNRsvSSksGS--ADvLEaL~Gv~i~~~~e~~~~~l~e--~g 77 (260)
T d1brwa2 6 GVKVDKHSTGGVGD---TTTLV-LGPLVASVGVPVAKMSGRGLGHTGGT--IDKLESVPGFHVEISKDEFIRLVNE--NG 77 (260)
T ss_dssp SCCEEEEECCCSSC---CHHHH-HHHHHHTTTCCEEEEECCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--HS
T ss_pred CCeeeeeCCCCCCc---hHHHH-HHHHHHhCCCccccccCCccCCCCch--HHHHHhccCCCCCCCHHHHHHHHHh--cC
Confidence 35799999999997 67999 99999999999999999999999999 9999999 99999999999999999 56
Q ss_pred eEee-cchhhChHhHHHHhhhcccCCCC------CCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEE
Q 007779 372 FAYV-SLREARPSLYSLIGLREHIKKRP------PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGL 444 (590)
Q Consensus 372 f~fl-~a~~~~Pal~~l~~vR~~Lg~Rt------PL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~al 444 (590)
|+|+ ++|.|||+|++++++||+++++| |+.||.++. .++.|++.. ++..+++
T Consensus 78 ~~Fl~~a~~~hpa~~~~~~~rr~l~~~t~~~~l~p~~~p~~~~---------~~~~~v~~~------------~~~~~~~ 136 (260)
T d1brwa2 78 IAIIGQTGDLTPADKKLYALRDVTATVNSIPLIASSIMSKKIA---------AGADAIVLD------------VKTGAGA 136 (260)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH---------HCCSEEEEE------------EEESTTS
T ss_pred ceeeccCcccCcHHhhhhhhhhccCcccchhhhcccccCchhh---------hchhhhhhh------------cCccceE
Confidence 6667 79999999999999999999999 555555543 667777643 3566888
Q ss_pred EEecCCCccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHH
Q 007779 445 VVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIEL 524 (590)
Q Consensus 445 VV~G~eG~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~ 524 (590)
+|+|.||.+|++.... +.++..+. .. .+.++|.+||+.... ....+ +..
T Consensus 137 ~v~~~~g~de~s~~~~---------------------~~~~~~~~-~~---~~~~t~~~~~l~~~~-----~~~~e-~~~ 185 (260)
T d1brwa2 137 FMKKLDEARRLARVMV---------------------DIGKRVGR-RT---MAVISDMSQPLGYAV-----GNALE-VKE 185 (260)
T ss_dssp SCCSHHHHHHHHHHHH---------------------HHHHHTTC-EE---EEEEEECSSCSSSEE-----SSHHH-HHH
T ss_pred EEcChHHHHHHhhhcc---------------------hheeecCC-ce---EEEeccchhhhcccc-----cchHH-HHH
Confidence 9999999999876542 22223333 22 388999999987653 23344 444
Q ss_pred HHHHHCCC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhc
Q 007779 525 GLAALRGE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISH 587 (590)
Q Consensus 525 ~~~vL~G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~ 587 (590)
+.++|.|+ +++.+|+|++|||++||++| +++|++||+++|+++|+||+|++||++|+++|+
T Consensus 186 ~~~iL~g~~~~~~~d~vllNAaaaL~vag--~a~sl~egv~~A~e~I~SG~A~~kL~~lI~aqg 247 (260)
T d1brwa2 186 AIETLKGNGPHDLTELCLTLGSHMVYLAE--KAPSLDEARRLLEEAIRSGAAIAAFKTFLAAQG 247 (260)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHHHTT--SSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred HHHhhhcCCCchHHHHHHHHHHHHHHHcC--cCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhC
Confidence 66888887 67899999999999999986 789999999999999999999999999999986
|
| >d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Thymidine phosphorylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-48 Score=396.53 Aligned_cols=240 Identities=19% Similarity=0.132 Sum_probs=195.0
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhccCc
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEIG 371 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g~g 371 (590)
.++||+|||||||+ |+||+ +|||+|++|+||+|||||++||+||| +|+||+| ||+++++|++++++|++ .|
T Consensus 10 ~~~iD~~GTGGdG~---ntST~-~a~VaAa~Gv~VaKHGNRsiSS~sGS--ADvLEaL~Gv~i~~~~e~~~~~l~~--~g 81 (273)
T d1uoua2 10 QQLVDKHSTGGVGD---KVSLV-LAPALAACGCKVPMISGRGLGHTGGT--LDKLESIPGFNVIQSPEQMQVLLDQ--AG 81 (273)
T ss_dssp GGBEEEEESCCTTC---CHHHH-HHHHHHTTTCBEEEECCCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--HS
T ss_pred CCeEeecCCCCCCc---hHHHH-HHHHHHhCCCccccccCCccCCCCch--HHHHHhccCCccCCCHHHHHHHHHh--cc
Confidence 46899999999998 56999 99999999999999999999999999 9999999 99999999999999999 56
Q ss_pred eEeecchhhChHhH-HHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCC
Q 007779 372 FAYVSLREARPSLY-SLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450 (590)
Q Consensus 372 f~fl~a~~~~Pal~-~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~e 450 (590)
|+|+++|.|||++. .+..+|. ||.||..+. .|++|||++++...+++++..+|..++++|+|.|
T Consensus 82 ~~F~fap~~h~~~~rtifn~lg------pl~np~~~~---------~~~~gv~~~~~~~~~a~~l~~~~~~~~~vv~g~d 146 (273)
T d1uoua2 82 CCIVGQSEQLVPADGILYAARD------VTATVDSLP---------LITASILSKKLVEGLSALVVDVKFGGAAVFPNQE 146 (273)
T ss_dssp EEEECCCSSSSHHHHHHHHHHH------HTTCSSCHH---------HHHHHHHHHHHHTTCSEEEEEEEEC--CCCCSHH
T ss_pred eeEeecccccchHHhHhhhhcc------ccccccchh---------hHhhhccChhhhhhHHHHHHhcCCccEEEEecch
Confidence 66677899887754 4555555 888887664 6899999999999999999999999999999999
Q ss_pred CccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHHHHHHHC
Q 007779 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALR 530 (590)
Q Consensus 451 G~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~~~~vL~ 530 (590)
|+||++.... +.++..+..... .++..++.++. ......+++.+..+|.
T Consensus 147 gldeis~~~~---------------------~~~~~~~~~~~~--~~t~~~~~~~~--------~~~~~~e~~~~~~~l~ 195 (273)
T d1uoua2 147 QARELAKTLV---------------------GVGASLGLRVAA--ALTAMDKPLGR--------CVGHALEVEEALLCMD 195 (273)
T ss_dssp HHHHHHHHHH---------------------HHHHHTTCCEEE--EEEECSSCSTT--------EESSHHHHHHHHHHHT
T ss_pred hhHHHhCccc---------------------eeeeecCCceEE--EecCchhhhcc--------ccCcHHHHhhHHHHHc
Confidence 9999986542 333333332211 13333322221 1233455666778999
Q ss_pred CC-CCchhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 531 GE-KGPTYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 531 G~-~~~~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
|+ +++.+|.|++|||++||++| +++|++||+++|+|+|+||+|++||++|+++|+.
T Consensus 196 g~~~~~~~d~vllNAAa~L~vag--~a~sl~eGv~lA~eaI~SGkAl~kLe~lI~Aqgg 252 (273)
T d1uoua2 196 GAGPPDLRDLVTTLGGALLWLSG--HAGTQAQGAARVAAALDDGSALGRFERMLAAQGV 252 (273)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHT--SCSSHHHHHHHHHHHHHSSHHHHHHHHHHHHTTC
T ss_pred CCCcchHHHHHHHHHHHHHHHhC--cCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHCC
Confidence 87 56789999999999999987 7899999999999999999999999999999863
|
| >d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain domain: Thymidine phosphorylase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.6e-48 Score=390.11 Aligned_cols=241 Identities=14% Similarity=0.088 Sum_probs=191.2
Q ss_pred CCCceEEccCCCCCCccccchHHHHHHHhcCCCcEEeecCCCCCCCCCCCHHHHHHhc-CCCCCCCHHHHHHHHHhccCc
Q 007779 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEIG 371 (590)
Q Consensus 293 ~~~vD~~GtGgDG~~t~niST~laA~vlAa~Gv~V~kHGnr~vtsk~Gst~aDvLeaL-Gi~i~~s~e~a~~~Le~~g~g 371 (590)
.++||+|||||||. |+||+ +|+|+|++|+||+|||||++||+||| +|+||+| |++++++++++.+++++ .|
T Consensus 9 ~p~vD~cGTGGDG~---ntST~-~a~V~Aa~Gv~VaKHGNRsvSS~sGS--ADvLEaL~Gv~i~~~~e~~~~~l~~--~g 80 (265)
T d2tpta2 9 GPIVDKHSTGGVGD---VTSLM-LGPMVAACGGYIPMISGRGLGHTGGT--LDKLESIPGFDIFPDDNRFREIIKD--VG 80 (265)
T ss_dssp SCBEEEEECCCSSC---CHHHH-HHHHHHHTTCBEEEEECCCCTTSCCH--HHHHTTSTTCCSCCCHHHHHHHHHH--TS
T ss_pred CCeeeeeCCCCCCh---hHHHH-HHHHHHhCCCceecccCCCCCCCCch--HHHHHhccCCCcCCCHHHHHHHHHh--hh
Confidence 46899999999998 56998 99999999999999999999999999 9999999 99999999999999999 56
Q ss_pred eEee-cchhhChHhHHHHhhhcccCCCCCCCcchhhhhhhhccCCceEEEEecCCcchHHHHHHHHHcCCceEEEEecCC
Q 007779 372 FAYV-SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450 (590)
Q Consensus 372 f~fl-~a~~~~Pal~~l~~vR~~Lg~RtPL~np~k~~~~lnP~~~~~~v~GV~h~~~~~~~a~~l~~lG~~~alVV~G~e 450 (590)
|+|+ ++|.|||+|++++++|+.++.||.++. ++.|+|++++...++.++..++..++++|+|.|
T Consensus 81 ~~Fl~~a~~~hpa~~~v~~vr~~l~~~t~~n~---------------~~~~v~~~~~~~~~~~~l~~~~~~~~~vv~~~d 145 (265)
T d2tpta2 81 VAIIGQTSSLAPADKRFYATRDITATVDSIPL---------------ITASILAKKLAEGLDALVMDVKVGSGAFMPTYE 145 (265)
T ss_dssp EEEEECCTTBSHHHHHHHHHHHHTTCCCCHHH---------------HHHHHHHHHHTTCCSEEEEEEEESTTSSSSSHH
T ss_pred hhhcccccccchHHHHHHHHhhcccccccccc---------------ccccccChHHHhHHHHHHHhcCCcceEEEechh
Confidence 6666 799999999999999999999884432 233444455555555556667888999999999
Q ss_pred CccccccccccccccCCCCccccccccccCcceeEecCCcEEeeeeEEEecCCCCCCCCCCCccCCCHHHHHHHHHHHHC
Q 007779 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVSKNIELGLAALR 530 (590)
Q Consensus 451 G~~els~~~~~~~~~~g~~~~~~~~~~~~~~t~v~~~~g~~~~~~~~~i~P~d~Gl~~~~~~~~~~~~~~na~~~~~vL~ 530 (590)
|++|++... .+.+++..... .+.++|.++++... ..+++++.+.++.++.
T Consensus 146 ~~de~s~~~---------------------~~~~~~~~~~~----~~~~t~~~~~l~~~-----~~~~~e~~~~~~~L~~ 195 (265)
T d2tpta2 146 LSEALAEAI---------------------VGVANGAGVRT----TALLTDMNQVLASS-----AGNAVEVREAVQFLTG 195 (265)
T ss_dssp HHHHHHHHH---------------------HHHHHHTTCEE----EEEEEECSSCSSSC-----EESHHHHHHHHHHHHT
T ss_pred hhHHHHHhc---------------------chhhhhcCCce----EEEEeeChHHhccc-----cCCHHHHHHHHHHHHc
Confidence 999887543 13333333322 14455555554432 2467776665544444
Q ss_pred CCCCc-hhHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHchHHHHHHHHHHHHhcc
Q 007779 531 GEKGP-TYDRIVLNAGMVDHLLGCDGAEDVSVAMDRAREAIDSGKALKRLLNYIKISHK 588 (590)
Q Consensus 531 G~~~~-~~d~v~lNAa~~L~l~g~g~a~s~~eg~~~A~e~i~SG~A~~~L~~~~~~~~~ 588 (590)
++.++ .+|.|++|||++||+.| ++++++||+++|+++|+||+|+++|++||++|+.
T Consensus 196 ~~~~~~~~d~v~lnaa~~L~~~g--~~~~~~eg~~~A~e~I~SG~A~~kl~~~I~aqgg 252 (265)
T d2tpta2 196 EYRNPRLFDVTMALCVEMLISGK--LAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKG 252 (265)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTT--SCSSHHHHHHHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred ccCChHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhCC
Confidence 44554 57999999999999986 7899999999999999999999999999999963
|
| >d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Anthranilate synthase GAT subunit, TrpG species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.97 E-value=5.3e-32 Score=260.19 Aligned_cols=161 Identities=17% Similarity=0.151 Sum_probs=136.3
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
.+++.||+|| +||++||++++|+|||+++++++.. + .+|+||+|||||+|.+..+.+...++ .
T Consensus 3 ~~liiD~~dsft~Ni~~~l~~lG~~~~vi~~d~~~~~~i~~---------~-~~~gvilsgGp~~~~~~~~~~~~~~i-~ 71 (195)
T d1qdlb_ 3 LTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIER---------I-DPDRLIISPGPGTPEKREDIGVSLDV-I 71 (195)
T ss_dssp EEEEEECSCSSHHHHHHHHHHTTCEEEEEETTTSCHHHHHH---------H-CCSEEEECCCSSCTTSHHHHTTHHHH-H
T ss_pred EEEEEECCCchHHHHHHHHHhCCCeEEEEeCCCCCHHHHHh---------h-CCCccccCCCCCccccccccccchhh-h
Confidence 4789999998 6799999999999999988775321 2 45899999999999976667776666 7
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-------------C--CceeEEeccchhccccCCCcEEEE
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-------------E--GERRAMNTFWPLLMRALPPDVIFI 187 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-------------~--~~~~~~~ryHsl~v~~~p~~l~v~ 187 (590)
+.+..++|+|| |||||.|+.++|++|.+. +.+.||... . .+.+.+++||++.+...|....++
T Consensus 72 ~~~~~~~PiLGIClG~Qll~~~~G~~v~~~-~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~h~~~~~~~~~~~~~~ 150 (195)
T d1qdlb_ 72 KYLGKRTPILGVCLGHQAIGYAFGAKIRRA-RKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVD 150 (195)
T ss_dssp HHHTTTSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEEECCSSCCSTTTTCCSEEEEEEEEEEEEECCCTTEEEE
T ss_pred hhhcCCCCEEEeehhhhhhhhccCCEEEee-cccccccccccccccccccccccCCCccceeeecceeeeeccccCcccc
Confidence 77888999999 999999999999999999 888888653 0 237899999999998888877777
Q ss_pred e--ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 188 A--DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 188 a--~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
+ ++++.+||++|+ ||||||||+ +.|+. |+|||.++
T Consensus 151 ~~~~~~~~i~ai~~~~~~i~GvQFHPE~~~s~~G~~il~nFl~~i 195 (195)
T d1qdlb_ 151 AISAEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNRV 195 (195)
T ss_dssp EEESSSCCEEEEEESSSSEEEESSBTTSTTCTTHHHHHHHHHHHC
T ss_pred eeccCCCcEEEEEECCCCEEEEEcCCCCCCCcchHHHHHHHHhhC
Confidence 5 678899999987 999999997 56887 99999874
|
| >d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Carbamoyl phosphate synthetase, small subunit C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=6.6e-32 Score=267.20 Aligned_cols=162 Identities=8% Similarity=0.014 Sum_probs=134.4
Q ss_pred cccccceeEeeccccH-----HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhH
Q 007779 44 LIGRRIRLTVKADLDS-----ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKV 118 (590)
Q Consensus 44 ~~~~~~~~~~~~~~d~-----~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~ 118 (590)
..+.+.+|.++| |=+ .+|+++|+.++|+++|. +.+++. -..||+||||||||+|. +++..
T Consensus 35 ~~~~~~~i~~~D-~G~k~~ilr~l~~~~~~~~v~p~~~-~~~~i~----------~~~pdgivlS~GPg~P~---~~~~~ 99 (228)
T d1a9xb2 35 EDELPFHVVAYD-FGAKRNILRMLVDRGCRLTIVPAQT-SAEDVL----------KMNPDGIFLSNGPGDPA---PCDYA 99 (228)
T ss_dssp GGGCCEEEEEEE-SSCCHHHHHHHHHTTEEEEEEETTC-CHHHHH----------TTCCSEEEECCCSBCST---TCHHH
T ss_pred CCCCcceEEEEe-CCCcHHhHhHHHhcCceEEEcCCCC-CHHHHH----------hcCCCEEEEeCCCCccc---cchhH
Confidence 344466888887 555 67888999999999994 455433 11579999999999999 78888
Q ss_pred HHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------CCceeEEeccchhcc--ccCCCcEEEEe
Q 007779 119 LDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------EGERRAMNTFWPLLM--RALPPDVIFIA 188 (590)
Q Consensus 119 ~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~~~~~~~~ryHsl~v--~~~p~~l~v~a 188 (590)
+++ ++. +..++|||| |||||+|+.+|||+|.++ +.++||+++ .+..+.+.+||++.+ .++|..+.+++
T Consensus 100 ~~~-~~~~~~~~iPILGIClG~Qlia~~~Gg~v~k~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 177 (228)
T d1a9xb2 100 ITA-IQKFLETDIPVFGICLGHQLLALASGAKTVKM-KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTH 177 (228)
T ss_dssp HHH-HHHHTTSCCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEEEEETTTTEEEEEEEEEEEEECSTTCCTTEEEEE
T ss_pred HHH-HHHHHhCCCCEEEEEcChHHHHHHcCCceeec-ccccccccccccccccceeeeecccccceecccccccceEEEE
Confidence 888 665 577899999 999999999999999999 899999987 244788899999998 57899999998
Q ss_pred --ecCCcEEEEEcC----CCCcccCCC---ch-hhH-HHHHHHHh
Q 007779 189 --DPEGSIMGGGGS----IGPHYSGND---PR-EMR-LVGALREV 222 (590)
Q Consensus 189 --~~~g~im~~~h~----~gvQfHPEs---~~-~m~-L~~~L~kl 222 (590)
.+|+.|||++|+ ||||||||| +. |.. +.+||+.+
T Consensus 178 ~s~~d~~i~ai~h~~~~i~gVQFHPE~~~t~~dg~~l~~nFl~~i 222 (228)
T d1a9xb2 178 KSLFDGTLQGIHRTDKPAFSFQGNPEASPGPHDAAPLFDHFIELI 222 (228)
T ss_dssp EETTTCCEEEEEESSSSEEEESSCTTCSSSCSTTTHHHHHHHHHH
T ss_pred EecCCCcEEEEEECCCCEEEEeCCCCCCCCcccHHHHHHHHHHHH
Confidence 468999999998 999999998 44 655 78888765
|
| >d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Anthranilate synthase GAT subunit, TrpG species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=4e-31 Score=254.57 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=130.5
Q ss_pred eeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHHH
Q 007779 50 RLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTIL 123 (590)
Q Consensus 50 ~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~i 123 (590)
.|++.||.|| +||+++|.+++|+|||.......+ .+. .-.+|+|++|||||+|. +......+ .
T Consensus 2 niliiD~~DSFt~ni~~~l~~lG~~~~v~~~~~~~~~~~~------~l~-~~~~~~iils~Gpg~~~---~~~~~~~i-~ 70 (192)
T d1i7qb_ 2 DILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIE------RLQ-HMEQPVLMLSPGPGTPS---EAGCMPEL-L 70 (192)
T ss_dssp EEEEEECSCSSHHHHHHHHHHTTCEEEEEETTSCHHHHHH------HHH-HCSSEEEEECCCSSCGG---GSTTHHHH-H
T ss_pred cEEEEECCCcHHHHHHHHHHHCCCeEEEEeCCCcccccHH------HHH-hcCCCeEEecCcccccc---ccccchhh-H
Confidence 3799999999 679999999999999854211100 000 11468999999999998 54444554 6
Q ss_pred HHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----C--------CceeEEeccchhccccCCCcEEEEeec
Q 007779 124 RSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E--------GERRAMNTFWPLLMRALPPDVIFIADP 190 (590)
Q Consensus 124 ~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----~--------~~~~~~~ryHsl~v~~~p~~l~v~a~~ 190 (590)
+.+..++|+|| |||||.|+.+|||+|.++ +.++||.+. . ...+.+.+||++.+..+|+.++++|..
T Consensus 71 ~~l~~~iPiLGIClG~Q~la~~~Gg~v~~~-~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~a~~ 149 (192)
T d1i7qb_ 71 QRLRGQLPIIGICLGHQAIVEAYGGQVGQA-GEILHGKASAIAHDGEGMFAGMANPLPVARYHSLVGSNIPADLTVNARF 149 (192)
T ss_dssp HHHBTTBCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEEECCCGGGTTCCSSEEEEEEEEEEEESCCTTSEEEEEE
T ss_pred HhhhcCccEEeeeHHHHHHHHHCCCeEEEC-CcccccceEEEeecCCCceeeccccceEEeecccccccccceeeeecCC
Confidence 67788999999 999999999999999999 899999875 1 237889999999999999999999965
Q ss_pred CCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHh
Q 007779 191 EGSIMGGGGS----IGPHYSGND---PREMR-LVGALREV 222 (590)
Q Consensus 191 ~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl 222 (590)
++.|||++|+ ||||||||| +.|.. |+|||.-.
T Consensus 150 ~~~i~ai~~~~~~i~GvQFHPEs~~t~~G~~il~nFl~~~ 189 (192)
T d1i7qb_ 150 GEMVMAVRDDRRRVCGFQFHPESILTTHGARLLEQTLAWA 189 (192)
T ss_dssp TTEEEEEEETTTTEEEESSCTTSTTSTTHHHHHHHHHHHH
T ss_pred CCeeEEEEECCCCEEEEEeCCCcCCCCChHHHHHHHHHHH
Confidence 7889999997 999999997 55666 89998543
|
| >d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GMP synthase subunit A, GuaAA species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.94 E-value=2.9e-27 Score=227.63 Aligned_cols=158 Identities=13% Similarity=0.051 Sum_probs=127.8
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
+||++.|+.|+ ++|+++|++++|++||. +..+ ++.+|+|||||||+++.+ +...+.++
T Consensus 2 ~ki~iiD~g~~~~~~i~r~l~~lg~~~~i~~~d~-~~~~------------~~~~dgiIl~Gg~~~~~~--~~~~~~~l- 65 (196)
T d2a9va1 2 LKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDI-DSSE------------LDGLDGLVLSGGAPNIDE--ELDKLGSV- 65 (196)
T ss_dssp CBEEEEEESCCTTCHHHHHHHHTTCBCCEEETTS-CGGG------------GTTCSEEEEEEECSCGGG--TGGGHHHH-
T ss_pred CEEEEEECCCcHHHHHHHHHHHCCCeEEEEeCCC-CHHH------------HhcCCcEEEecccccccc--ccchhhhH-
Confidence 47899999988 68999999999999984 2322 456799999999998762 22333333
Q ss_pred HHHh-cCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----------C--CceeEEeccchhccccCCCcEEEEe
Q 007779 123 LRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----------E--GERRAMNTFWPLLMRALPPDVIFIA 188 (590)
Q Consensus 123 i~~~-~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------~--~~~~~~~ryHsl~v~~~p~~l~v~a 188 (590)
++.+ ..++|+|| |+|||.|+.++||++.+. ..+.+|... . .+.+.+.+||++.|.++|+.++++|
T Consensus 66 ~~~~~~~~~PilGIC~G~Qll~~~~gg~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~~~~~v~a 144 (196)
T d2a9va1 66 GKYIDDHNYPILGICVGAQFIALHFGASVVKA-KHPEFGKTKVSVMHSENIFGGLPSEITVWENHNDEIINLPDDFTLAA 144 (196)
T ss_dssp HHHHHHCCSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEESCCCGGGTTCCSEEEEEEEEEEEEESCCTTEEEEE
T ss_pred HHHHhhcCceEEEeehhhhhhhhccccccccc-cccccccceEEEecCCccccCCCCceEEEecceeEEEeCCCccceee
Confidence 5554 34799999 999999999999999998 777776543 1 2478999999999999999999999
Q ss_pred -ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhh
Q 007779 189 -DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVL 223 (590)
Q Consensus 189 -~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~ 223 (590)
++++.|||++|+ ||+|||||+ +.|.. +++|++...
T Consensus 145 ~~~~~~v~ai~~~~~~i~gvQfHPE~~~s~~G~~il~~F~~~~~ 188 (196)
T d2a9va1 145 SSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGICA 188 (196)
T ss_dssp ECSSCSCSEEEESSSSEEEESSCTTSTTSTTHHHHHHHHHHHHH
T ss_pred cccccchheEEECCCCEEEEEeCcccCCCccHHHHHHHHHHHHH
Confidence 888999999987 899999996 56777 788887653
|
| >d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GMP synthetase species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=9.9e-27 Score=224.79 Aligned_cols=160 Identities=9% Similarity=-0.042 Sum_probs=124.9
Q ss_pred ceeEeeccccH------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhhHHHHH
Q 007779 49 IRLTVKADLDS------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTI 122 (590)
Q Consensus 49 ~~~~~~~~~d~------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~~~~~~ 122 (590)
-||.++|.=++ .+++++|++++|++||. +..+.. ...+|+|++|||||+|.+ .+.....
T Consensus 6 ~kI~IiD~G~~~~~~I~r~lr~lg~~~~I~~~d~-~~~~~~----------~~~~~giils~gp~~~~~---~~~~~~~- 70 (205)
T d1gpma2 6 HRILILDFGSQYTQLVARRVRELGVYCELWAWDV-TEAQIR----------DFNPSGIILSGGPESTTE---ENSPRAP- 70 (205)
T ss_dssp SEEEEEECSCTTHHHHHHHHHHTTCEEEEEESCC-CHHHHH----------HHCCSEEEECCCSSCTTS---TTCCCCC-
T ss_pred CeEEEEECCchHHHHHHHHHHHCCCEEEEECCCC-CHHHHh----------hcCCCeEEecCCCCccch---hhhhhHH-
Confidence 37889988776 56899999999999984 333211 225699999999999984 3332222
Q ss_pred HHHhcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc----------CC----------ceeEEeccchhccccCC
Q 007779 123 LRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----------EG----------ERRAMNTFWPLLMRALP 181 (590)
Q Consensus 123 i~~~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------~~----------~~~~~~ryHsl~v~~~p 181 (590)
.+.+..++|+|| |||||+|+++|||++.++ +.++||..+ .+ ..+.+..+|+..+..+|
T Consensus 71 ~~~~~~~~PiLGIClG~Qlla~~~Gg~v~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 149 (205)
T d1gpma2 71 QYVFEAGVPVFGVCYGMQTMAMQLGGHVEAS-NEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIP 149 (205)
T ss_dssp GGGGTSSSCEEEETHHHHHHHHHHTCEEECC-SSCEEEEEEEEECSCCTTTTTCCSEECTTSCEEEEEEEEECSEEEECC
T ss_pred HHHHhCCCCEEEeccchhhhhhhcCCccccc-cccccCcceeccccccccccccccccccCCccceeeeccccccccccc
Confidence 344567899999 999999999999999999 899999764 01 14567788888888889
Q ss_pred CcEEEEe-ecCCcEEEEEcC----CCCcccCCC---chhhH-HHHHHHHhhc
Q 007779 182 PDVIFIA-DPEGSIMGGGGS----IGPHYSGND---PREMR-LVGALREVLA 224 (590)
Q Consensus 182 ~~l~v~a-~~~g~im~~~h~----~gvQfHPEs---~~~m~-L~~~L~kl~~ 224 (590)
+...+++ ++++.+++++|+ ||||||||+ +.|.. |+|||+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~ni~gvQFHPE~s~s~~G~~il~nFl~~i~~ 201 (205)
T d1gpma2 150 SDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQ 201 (205)
T ss_dssp TTCEEEEECSSCSCSEEEETTTTEEEESBCTTSTTSTTHHHHHHHHHHTTSC
T ss_pred ccceeeeccCCCceEEEEeCCCCEEEEEeecccCCCccHHHHHHHHHHHHhC
Confidence 8888888 677777777775 999999996 56777 9999988754
|
| >d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein TM1158 species: Thermotoga maritima [TaxId: 2336]
Probab=99.83 E-value=9.9e-21 Score=186.48 Aligned_cols=160 Identities=12% Similarity=0.080 Sum_probs=118.5
Q ss_pred ccceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhh---h
Q 007779 47 RRIRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEA---F 116 (590)
Q Consensus 47 ~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~---g 116 (590)
+.+||+++-..|. ++|++.|.++++++-+.-+. .+.+ ++.+|+||+++||.++.+.++. .
T Consensus 2 ~~mrvli~qh~~~e~~G~~~~~l~~~g~~~~~~~~~~~~~------~p~~----l~~~d~iii~Ggp~~~~d~~~~~~~~ 71 (230)
T d1o1ya_ 2 HHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEK------LERP----LEEYSLVVLLGGYMGAYEEEKYPFLK 71 (230)
T ss_dssp CCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCC------CSSC----GGGCSEEEECCCSCCTTCTTTCTHHH
T ss_pred CceEEEEEECCCCCCcHHHHHHHHHCCCEEEEEECCCCCc------CCcc----hhhCCEEEEcCCCcccccchhhhhhH
Confidence 3578888866654 77888899999987653211 2222 5678999999999998754332 2
Q ss_pred hHHHHHHHH-hcCCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc------C-------CceeEEeccchhccccCC
Q 007779 117 KVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS------E-------GERRAMNTFWPLLMRALP 181 (590)
Q Consensus 117 ~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~-------~~~~~~~ryHsl~v~~~p 181 (590)
...++ |+. ...++|+|| |+|||+|+.++||+|.+. +.+.++.+. + ...+.+.+||+. +..+|
T Consensus 72 ~~~~~-i~~~~~~~~PilGIC~G~Qlla~alGg~V~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~d-~~~lp 148 (230)
T d1o1ya_ 72 YEFQL-IEEILKKEIPFLGICLGSQMLAKVLGASVYRG-KNGEEIGWYFVEKVSDNKFFREFPDRLRVFQWHGD-TFDLP 148 (230)
T ss_dssp HHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEC-TTCCEEEEEEEEECCCCGGGTTSCSEEEEEEEESE-EECCC
T ss_pred HHHHH-HHHHHHhcceEEEeecCHHHHHHHhccccccc-cccccccccccccccchhhhccCCccceEEEecce-eeeec
Confidence 23455 554 345799999 999999999999999998 665555443 1 237889999998 45799
Q ss_pred CcEEEEe-ecCCcEEEEEcC--CCCcccCCCchhhHHHHHHH
Q 007779 182 PDVIFIA-DPEGSIMGGGGS--IGPHYSGNDPREMRLVGALR 220 (590)
Q Consensus 182 ~~l~v~a-~~~g~im~~~h~--~gvQfHPEs~~~m~L~~~L~ 220 (590)
++.+++| ++++.++|++.. ||+|||||....+ +++||+
T Consensus 149 ~~~~~la~s~~~~~qa~~~~~~~g~QfHPE~~~~~-~~~~i~ 189 (230)
T d1o1ya_ 149 RRATRVFTSEKYENQGFVYGKAVGLQFHIEVGART-MKRWIE 189 (230)
T ss_dssp TTCEEEEECSSCSCSEEEETTEEEESSBSSCCHHH-HHHHHH
T ss_pred cchhhhhhhcCCceEEEEecCEeEEEeCCCCCHHH-HHHHHH
Confidence 9999999 777889999888 9999999985544 455553
|
| >d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=4e-19 Score=170.09 Aligned_cols=161 Identities=8% Similarity=0.017 Sum_probs=96.1
Q ss_pred ceeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC----chhhhhH
Q 007779 49 IRLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR----EDEAFKV 118 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~----~~~~g~~ 118 (590)
|+|.+.| |++| +.|+.+|..+.+++.+..+..+ .+.+|+||| ||||...+ ..+.+ .
T Consensus 1 MKI~IiDyg~gN~~si~~al~~~g~~~~~~~~~~~~~~~------------~~~~D~lIl-PG~G~f~~~~~~l~~~~-~ 66 (200)
T d1k9vf_ 1 MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPR------------NDLYDLLFI-PGVGHFGEGMRRLREND-L 66 (200)
T ss_dssp CEEEEECSSSSCCHHHHHHHHHHTTTSSSCEEEEESSSC------------SCCCSEEEE-CCCSCHHHHHHHHHHTT-C
T ss_pred CEEEEEeCCCcHHHHHHHHHHHhccccccceEEEeCChH------------hhccCeEEE-cChHHHHHHHHhhhccc-c
Confidence 4677887 7888 7899998755443332111111 234589999 99997431 11222 3
Q ss_pred HHHHHHHhcCCCCccc-ccchHHHHhHhCce------------eeccC-CCCcCcccc-----CC-ceeEEeccchhccc
Q 007779 119 LDTILRSAKGDLKDEE-EVSKAQLGAFFSAM------------TIRAN-AFPEATQWS-----EG-ERRAMNTFWPLLMR 178 (590)
Q Consensus 119 ~~~~i~~~~~~~PilG-CLGhQ~i~~~~G~~------------v~~~~-~~~~hG~~s-----~~-~~~~~~ryHsl~v~ 178 (590)
.+.|.+.+..++|||| |||||+|+...+.. +.+.. ...-|..|. .. ....+...||+.+.
T Consensus 67 ~~~i~~~~~~~~PiLGIClG~QlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hs~~~~ 146 (200)
T d1k9vf_ 67 IDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWNEVIFKDTFPNGYYYFVHTYRAV 146 (200)
T ss_dssp HHHHHHHHHTTCEEEEETHHHHTTEEEETTSTTCCCCCCEEEEEEECSCSSCSEEEEEEEEESSSSCCEEEEEEESEEEE
T ss_pred cccccccccccceEEEEecceeEEeeecccCccccccccccccccccccccccccccccccccccCCceEEEEeeeeeec
Confidence 4553555667899999 99999999764221 11110 001112221 11 13345567888775
Q ss_pred cCCCcEEEEeecCCc-EE-EEEcC--CCCcccCC-C-chhhH-HHHHHHHhh
Q 007779 179 ALPPDVIFIADPEGS-IM-GGGGS--IGPHYSGN-D-PREMR-LVGALREVL 223 (590)
Q Consensus 179 ~~p~~l~v~a~~~g~-im-~~~h~--~gvQfHPE-s-~~~m~-L~~~L~kl~ 223 (590)
.-++....+++.+|. ++ ++++. |||||||| | +.|++ |+|||+.-+
T Consensus 147 ~~~~~~~~~~~~~~~~~~a~v~~~ni~GvQFHPEkS~~~G~~ll~nFl~~~~ 198 (200)
T d1k9vf_ 147 CEEEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEKSSKIGRKLLEKVIECSL 198 (200)
T ss_dssp ECGGGEEEEEEETTEEEEEEEEETTEEEESSBGGGSHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEECCeEEEEEEEcCCEEEEeCCCcccchhHHHHHHHHHhhhh
Confidence 444455555544444 44 56665 99999999 7 77888 999996543
|
| >d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=2.9e-17 Score=154.52 Aligned_cols=153 Identities=12% Similarity=-0.020 Sum_probs=93.7
Q ss_pred ceeEeec----cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC----chhhhhH
Q 007779 49 IRLTVKA----DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR----EDEAFKV 118 (590)
Q Consensus 49 ~~~~~~~----~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~----~~~~g~~ 118 (590)
|+|+++| |++| +.|+++|+++.++++++ + ++..|++|| ||.|.+.. ..+.+..
T Consensus 1 Mki~IiD~G~gN~~si~~~l~~lg~~~~i~~~~~----~------------i~~~d~lIl-pG~g~~~~~~~~~~~~~~~ 63 (195)
T d1ka9h_ 1 MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPK----A------------HEEADLLVL-PGQGHFGQVMRAFQESGFV 63 (195)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHTTCEEEEESSTT----S------------CSSCSEEEE-CCCSCHHHHHHTTSSSCTH
T ss_pred CEEEEEeCCCcHHHHHHHHHHHCCCeEEEECCHH----H------------HHHHhhhhc-CCCccccchhhhccccCCc
Confidence 5789999 8999 88999999999987652 1 334578888 77776431 1122333
Q ss_pred HHHHHHHhcCCCCccc-ccchHHHHhHh-------CceeeccCCCCcCccc-------cC---------CceeEEeccch
Q 007779 119 LDTILRSAKGDLKDEE-EVSKAQLGAFF-------SAMTIRANAFPEATQW-------SE---------GERRAMNTFWP 174 (590)
Q Consensus 119 ~~~~i~~~~~~~PilG-CLGhQ~i~~~~-------G~~v~~~~~~~~hG~~-------s~---------~~~~~~~ryHs 174 (590)
+.+.+.....+|+|| |||+|.|+... |..+... ....+... .. .........|+
T Consensus 64 -~~~~~~~~~g~pilGiClG~qll~~~~~e~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (195)
T d1ka9h_ 64 -ERVRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPG-EVRRFRAGRVPQMGWNALEFGGAFAPLTGRHFYFANS 141 (195)
T ss_dssp -HHHHHHHHTTCCEEECTHHHHTTSSEETTSTTCCCCCSSSS-EEEECCSSSSSEEEEEECEECGGGGGGTTCEEEEEES
T ss_pred -ccccccccccchhhhhhhhhheeeeccccccccCCceeeec-ccccccccccccccccccccccccccccccccccccc
Confidence 343555667899999 99999998643 2222211 11111110 00 01234455677
Q ss_pred hccccCCCcEEEEeecCCcE-EEEEcC--CCCcccCC-C-chhhH-HHHHHH
Q 007779 175 LLMRALPPDVIFIADPEGSI-MGGGGS--IGPHYSGN-D-PREMR-LVGALR 220 (590)
Q Consensus 175 l~v~~~p~~l~v~a~~~g~i-m~~~h~--~gvQfHPE-s-~~~m~-L~~~L~ 220 (590)
+.+...+.....+...+..+ ++++++ |||||||| | +.|.+ |+||++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~a~v~~~ni~GvQFHPEkS~~~G~~lL~nF~~ 193 (195)
T d1ka9h_ 142 YYGPLTPYSLGKGEYEGTPFTALLAKENLLAPQFHPEKSGKAGLAFLALARR 193 (195)
T ss_dssp EECCCCTTCCEEEEETTEEEEEEEECSSEEEESSCTTSSHHHHHHHHHHHHH
T ss_pred eeeeccccceeeeecCCceEEEEEEcCCEEEEeCCcccccHhHHHHHHHHHH
Confidence 77654444433333444444 556665 99999999 7 67887 788875
|
| >d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Pectobacterium carotovorum [TaxId: 554]
Probab=99.67 E-value=7.2e-17 Score=129.74 Aligned_cols=67 Identities=21% Similarity=0.288 Sum_probs=64.6
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCCC
Q 007779 216 VGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPP 289 (590)
Q Consensus 216 ~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~~ 289 (590)
+.+|+++.+|++||++|++++|+.|+ +|+++|.|++|||+++++||||.|||+||++||++++.++|
T Consensus 3 ~~il~kl~~g~~Ls~ee~~~~~~~i~-------~g~~~d~qiaafL~al~~kg~t~dEi~g~~~am~~~~~~~P 69 (69)
T d1khda1 3 QPILEKLFKSQSMTQEESHQLFAAIV-------RGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFP 69 (69)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHT-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCC
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCC
Confidence 57899999999999999999999999 99999999999999999999999999999999999998765
|
| >d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.66 E-value=7.7e-17 Score=129.85 Aligned_cols=69 Identities=22% Similarity=0.342 Sum_probs=66.2
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP 288 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~ 288 (590)
|.++++|+++..|++||++|++++|+.|+ +|+++|.|++|||+++++||||++|++||++||++++.++
T Consensus 1 M~~~~il~~l~~g~~Ls~~e~~~~~~~i~-------~g~~s~~qiaafL~al~~kGet~~Ei~g~~~amr~~~~~v 69 (70)
T d1o17a1 1 MNINEILKKLINKSDLEINEAEELAKAII-------RGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKI 69 (70)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccCC
Confidence 46889999999999999999999999999 9999999999999999999999999999999999998765
|
| >d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Pyrimidine nucleoside phosphorylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.64 E-value=2.1e-16 Score=127.35 Aligned_cols=69 Identities=20% Similarity=0.224 Sum_probs=65.4
Q ss_pred hHHHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCCCC
Q 007779 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP 288 (590)
Q Consensus 213 m~L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~~~ 288 (590)
|+++++|+|+.+|++||++|++++|+.|+ +|+++|.|++|||+|+++||||++|++||++||+++...+
T Consensus 1 M~~~eii~k~~~g~~Ls~~E~~~~~~~i~-------~g~~s~~qi~afL~al~~kG~t~~Ei~~~~~aM~~sg~~i 69 (70)
T d1brwa1 1 MRMVDLIAKKRDGKALTKEEIEWIVRGYT-------NGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEML 69 (70)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCC
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccc
Confidence 56789999999999999999999999999 9999999999999999999999999999999999976543
|
| >d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein YaaE species: Bacillus subtilis [TaxId: 1423]
Probab=99.61 E-value=2.9e-16 Score=150.01 Aligned_cols=148 Identities=9% Similarity=0.018 Sum_probs=95.2
Q ss_pred cccH--HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCch---hhhhHHHHHHHHhcCCC
Q 007779 56 DLDS--ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRED---EAFKVLDTILRSAKGDL 130 (590)
Q Consensus 56 ~~d~--~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~---~~g~~~~~~i~~~~~~~ 130 (590)
|+-| +.|+++|+++.++++.+ + ++.+|+||| || |.-.... +.....+.|.+.....+
T Consensus 12 ~~~~~~~al~~~G~~~~~i~~~~----~------------l~~~D~lIl-PG-G~~~~~~~~~~~~~~~~~I~~~~~~g~ 73 (195)
T d2nv0a1 12 AVREHIHAIEACGAAGLVVKRPE----Q------------LNEVDGLIL-PG-GESTTMRRLIDTYQFMEPLREFAAQGK 73 (195)
T ss_dssp CCHHHHHHHHHTTCEEEEECSGG----G------------GGGCSEEEE-CC-SCHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHCCCcEEEECCHH----H------------HhhCCEEEE-CC-CCccHHHHHhhhchhcchhhhhhhhcc
Confidence 4555 67999999999987632 1 456699999 55 3211000 11123455244456679
Q ss_pred Cccc-ccchHHHHhHhCceeeccCC-----CCcCcccc-------------CCceeEEeccchhccccCCCcEEEEeecC
Q 007779 131 KDEE-EVSKAQLGAFFSAMTIRANA-----FPEATQWS-------------EGERRAMNTFWPLLMRALPPDVIFIADPE 191 (590)
Q Consensus 131 PilG-CLGhQ~i~~~~G~~v~~~~~-----~~~hG~~s-------------~~~~~~~~ryHsl~v~~~p~~l~v~a~~~ 191 (590)
|+|| |+|||.|++.+|+...+.-. ...++.+. .+..+.+..||+..+..+|+.+++++..+
T Consensus 74 pilGIC~G~Qll~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~vla~~~ 153 (195)
T d2nv0a1 74 PMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHN 153 (195)
T ss_dssp CEEEETHHHHHHSBCCC----CCCCCSCEEEECCCSCTTTSEEEEEECCTTCSSCEEEEEESCCEEEEECTTCEEEEEET
T ss_pred eeeeccccHHHHHhhhcccccccccccccccccccccccceeeeeeecccCCCCCceEEEEeeeEEEecCCCceeeeeEC
Confidence 9999 99999999999875332100 00111111 12367888999999988999999999656
Q ss_pred CcEEEEEcC--CCCcccCCCchhhH-HHHHHHH
Q 007779 192 GSIMGGGGS--IGPHYSGNDPREMR-LVGALRE 221 (590)
Q Consensus 192 g~im~~~h~--~gvQfHPEs~~~m~-L~~~L~k 221 (590)
+.++|+++. ||+|||||-..+.+ ++.|++.
T Consensus 154 ~~~~a~~~~ni~g~QFHPE~s~~~~~~~~F~~~ 186 (195)
T d2nv0a1 154 GRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEM 186 (195)
T ss_dssp TEEEEEEETTEEEESSCTTSSSCCHHHHHHHHH
T ss_pred CEEEEEEECCEEEEEeCCcccCCcHHHHHHHHH
Confidence 778899887 99999999754444 3444443
|
| >d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Thymidine phosphorylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.1e-15 Score=122.35 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=61.8
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcC
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEL 285 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~ 285 (590)
+.++|+++.+|++||++|++++|+.|+ +|+++|.|++|||+|+++||||.+|++||++||++..
T Consensus 4 ~~eiI~k~~~g~~Ls~~E~~~~~~~i~-------~g~~s~~qi~afL~al~~kG~t~~Ei~~~t~aM~~sG 67 (68)
T d1uoua1 4 LPELIRMKRDGGRLSEADIRGFVAAVV-------NGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSG 67 (68)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999 9999999999999999999999999999999999864
|
| >d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein YaaE species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.58 E-value=1.3e-15 Score=146.01 Aligned_cols=145 Identities=10% Similarity=-0.003 Sum_probs=96.7
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCC-chhh--hhHHHHHHHHhcCCCCccc-c
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLR-EDEA--FKVLDTILRSAKGDLKDEE-E 135 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~-~~~~--g~~~~~~i~~~~~~~PilG-C 135 (590)
+.|+.+|.++.++++. ++ ++.+|+||| || |.... .... -...+.|.+.....+|+|| |
T Consensus 23 ~al~~~G~~~~~v~~~----~~------------l~~~D~lIl-PG-G~~~~~~~~l~~~~l~~~I~~~~~~gkPiLGIC 84 (202)
T d1q7ra_ 23 RAIEACGAEAVIVKKS----EQ------------LEGLDGLVL-PG-GESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTC 84 (202)
T ss_dssp HHHHHTTCEEEEECSG----GG------------GTTCSEEEE-CC-CCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEET
T ss_pred HHHHHCCCcEEEECCH----HH------------HhcCCEEEE-CC-CCcHHHHHHhhhhHHHHHHhhhccccceeeeee
Confidence 5789999999988642 21 556799999 66 54321 0000 1234552333556799999 9
Q ss_pred cchHHHHhHhCceeeccCCCCcCcccc-------------------CCceeEEeccchhccccCCCcEEEEeecCCcEEE
Q 007779 136 VSKAQLGAFFSAMTIRANAFPEATQWS-------------------EGERRAMNTFWPLLMRALPPDVIFIADPEGSIMG 196 (590)
Q Consensus 136 LGhQ~i~~~~G~~v~~~~~~~~hG~~s-------------------~~~~~~~~ryHsl~v~~~p~~l~v~a~~~g~im~ 196 (590)
+|||.|+...++...+- -....++.. .+..+....+|+..+..+|+.++++|+.++.++|
T Consensus 85 lG~Qll~~~~~~~~~~~-lg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~a 163 (202)
T d1q7ra_ 85 AGLILLAKRIVGYDEPH-LGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEAGDGVDVLATYNDRIVA 163 (202)
T ss_dssp THHHHHEEEEESSCCCC-CCCEEEEEECHHHHCCCCCEEEEEEETTTEEEEEEEESSCCEEEEECTTCEEEEEETTEEEE
T ss_pred hhhHHhhhhccccceee-cccccccccccccccccccceeccccccccCCcceEEEeeccccccccceeEEeecCCEEEE
Confidence 99999998665543221 011111110 1236777788888888889999999955668889
Q ss_pred EEcC--CCCcccCCCchhhH-HHHHHHHhh
Q 007779 197 GGGS--IGPHYSGNDPREMR-LVGALREVL 223 (590)
Q Consensus 197 ~~h~--~gvQfHPEs~~~m~-L~~~L~kl~ 223 (590)
+++. ||+|||||...+.+ +++|++.+.
T Consensus 164 ~~~gni~G~QFHPEkS~~~~il~~Fl~~~~ 193 (202)
T d1q7ra_ 164 ARQGQFLGCSFHPELTDDHRLMQYFLNMVK 193 (202)
T ss_dssp EEETTEEEESSCGGGSSCCHHHHHHHHHHH
T ss_pred EEeCCEEEEEeCCccCCChHHHHHHHHHHH
Confidence 8887 99999999765666 788887664
|
| >d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Thymidine phosphorylase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=1.7e-15 Score=121.96 Aligned_cols=65 Identities=18% Similarity=0.162 Sum_probs=62.5
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhcCC
Q 007779 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG 286 (590)
Q Consensus 215 L~~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eElag~~~A~~~~~~ 286 (590)
.+++|+++.+|++||++|++++|+.|+ +|+++|.|++|||+|+++||||.+|++||++||++...
T Consensus 4 ~qeiI~k~~~g~~Ls~~E~~~~~~~i~-------~g~~~d~qi~afL~al~~kGet~~Ei~~~~~aMr~sG~ 68 (70)
T d2tpta1 4 AQEIIRKKRDGHALSDEEIRFFINGIR-------DNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGT 68 (70)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSB
T ss_pred HHHHHHHHHCCCCcCHHHHHHHHHHHH-------cCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999 99999999999999999999999999999999998753
|
| >d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: gamma-glutamyl hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2e-15 Score=152.66 Aligned_cols=139 Identities=9% Similarity=0.032 Sum_probs=93.2
Q ss_pred HHHHHhCCceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCchhhhh----HHHHHHHH-h-cCCCCcc
Q 007779 60 ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFK----VLDTILRS-A-KGDLKDE 133 (590)
Q Consensus 60 ~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~~~~g~----~~~~~i~~-~-~~~~Pil 133 (590)
++++..|..|.++..+.-. ++.+ .+++..||||++.|+++.. ....+. .++..+.. . ...+|+|
T Consensus 32 k~ie~aGa~vvpi~~~~~~-~~~~--------~~l~~idGillpGG~~~~~-~~~~~~~~r~~~~~~l~~~~~~~~~Pil 101 (288)
T d1l9xa_ 32 KYLESAGARVVPVRLDLTE-KDYE--------ILFKSINGILFPGGSVDLR-RSDYAKVAKIFYNLSIQSFDDGDYFPVW 101 (288)
T ss_dssp HHHHHTTCEEEEECSSCCH-HHHH--------HHHHHSSEEEECCCCCCTT-TCHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHCCCEEEEECCCCCH-HHHH--------HHHhhcCCeEecCCCCCcc-cccccccchHHHHHHHHHHHhhCCCCeE
Confidence 5677889999999887532 2211 1255669999988876532 113332 22221222 2 2348999
Q ss_pred c-ccchHHHHhHhCceeeccCCCCcCcccc------C--------C----------ceeEEeccchhccc--------cC
Q 007779 134 E-EVSKAQLGAFFSAMTIRANAFPEATQWS------E--------G----------ERRAMNTFWPLLMR--------AL 180 (590)
Q Consensus 134 G-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s------~--------~----------~~~~~~ryHsl~v~--------~~ 180 (590)
| |+|||.|+.++||++.+. ....||... + . ..-.+..+|++.|. .+
T Consensus 102 GIC~G~Qll~~~~gG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~H~~~v~~~~~~~~~~l 180 (288)
T d1l9xa_ 102 GTCLGFEELSLLISGECLLT-ATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKL 180 (288)
T ss_dssp EETHHHHHHHHHHHSSCCCE-EEEEEEEEECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHH
T ss_pred EEcHHHHHHHHHhCCEeecc-ccCcCCcceeEEecCCCccceeEeecccchhhhccCCceEEEecccEEEecccchhhhc
Confidence 9 999999999999998776 444444332 0 0 13346678999883 57
Q ss_pred CCcEEEEe-ecCCc---EEEEEcC----CCCcccCCC
Q 007779 181 PPDVIFIA-DPEGS---IMGGGGS----IGPHYSGND 209 (590)
Q Consensus 181 p~~l~v~a-~~~g~---im~~~h~----~gvQfHPEs 209 (590)
++.++++| +.||. |++++|+ ||||||||.
T Consensus 181 ~~~~~v~a~s~d~~~e~I~~ie~~~~pi~GvQfHPEk 217 (288)
T d1l9xa_ 181 KKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEK 217 (288)
T ss_dssp HHHEEEEEEEESSSCEEEEEEEESSSCEEEESSCTTH
T ss_pred CCceEEEEEECCCCeEEEEEEEcCCCcEEEEEcCCCC
Confidence 88999999 66765 6777887 899999994
|
| >d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Methionine synthase domain-like superfamily: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain family: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain domain: Anthranilate phosphoribosyltransferase (TrpD) species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=2.3e-14 Score=108.66 Aligned_cols=51 Identities=25% Similarity=0.368 Sum_probs=49.5
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHH
Q 007779 217 GALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDREL 274 (590)
Q Consensus 217 ~~L~kl~~G~~Lt~eEa~~a~~~Il~~~~~~~~g~~sd~qigAFL~alr~KgET~eEl 274 (590)
++|+++..|++||++|++++|+.|| +|+++|.|+||||+|||+||||++||
T Consensus 2 d~l~kl~~g~~Lt~~ea~~~~~~im-------~G~~~~~qiaafL~al~~KGeT~~Ei 52 (52)
T d2elca1 2 DAVKKAILGEVLEEEEAYEVMRALM-------AGEVSPVRAAGLLVALSLRGERPHEI 52 (52)
T ss_dssp CHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCcccC
Confidence 4789999999999999999999999 99999999999999999999999997
|
| >d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Pyridoxine biosynthesis protein 2, Pdx2 species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.19 E-value=5.6e-12 Score=120.72 Aligned_cols=149 Identities=11% Similarity=0.007 Sum_probs=81.4
Q ss_pred HHHHHhCC-ceEEEeCCCCCccccccCCCCCccccccCCCeEEECCCCCCCCCc---hhhhhHHHHHHHHhc-CCCCccc
Q 007779 60 ALIDQLGL-KESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLRE---DEAFKVLDTILRSAK-GDLKDEE 134 (590)
Q Consensus 60 ~~~~~lg~-~~~v~rnd~~~~~~~~~~~~~~~~~~~~~~~~ivlspGPg~P~~~---~~~g~~~~~~i~~~~-~~~PilG 134 (590)
+.|+.+|. .+.|+..+. .++ ++..|+|||.+|+..+... .......+.|++... .++|+||
T Consensus 19 ~al~~lg~~~~~v~~~~~--~~~------------l~~~D~lIlPGgg~~~~~~~~~~~~~~~~~~i~~~~~~~gkPilG 84 (218)
T d2abwa1 19 NHFIKLQIPSLNIIQVRN--VHD------------LGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWG 84 (218)
T ss_dssp HHHHTTCCTTEEEEEECS--HHH------------HHTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEE
T ss_pred HHHHHcCCCceEEEEeCC--HHH------------HhhCCEEEEcCCCccHHHHHHHHHhccchHHHHHHHHHcCCeEEE
Confidence 67888885 334433331 222 4566999998775443210 011122344354443 5799999
Q ss_pred -ccchHHHHhHhCceeeccCCCCcCcccc----------CC---------------------ceeEEeccchhccccCCC
Q 007779 135 -EVSKAQLGAFFSAMTIRANAFPEATQWS----------EG---------------------ERRAMNTFWPLLMRALPP 182 (590)
Q Consensus 135 -CLGhQ~i~~~~G~~v~~~~~~~~hG~~s----------~~---------------------~~~~~~ryHsl~v~~~p~ 182 (590)
|+|+|.|+...++..... ....++... .+ ..-...-||.......++
T Consensus 85 IC~G~QlL~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~h~~~~~~~ 163 (218)
T d2abwa1 85 TCAGCILLSKNVENIKLYS-NFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSD 163 (218)
T ss_dssp ETHHHHHTEEEEECCCSCC-TTGGGSCCCCEEEEEECCC----CCEEEEECEECCCCTTCCTTCEEEEESCCEEEEECCT
T ss_pred ecHHHHHHHHhccCCcccc-ccccccccccccccceecccCCcccccccceeeccCCccccCcccceeEEeeEEEEeecC
Confidence 999999998876655443 232233221 00 011122232222223455
Q ss_pred cEEEEe-e---cCC--cEEEEEcC--CCCcccCCCchhhH-HHHHHHHhh
Q 007779 183 DVIFIA-D---PEG--SIMGGGGS--IGPHYSGNDPREMR-LVGALREVL 223 (590)
Q Consensus 183 ~l~v~a-~---~~g--~im~~~h~--~gvQfHPEs~~~m~-L~~~L~kl~ 223 (590)
+.++.+ . ..| .|.|+++. +|+|||||-....+ ++.|++.+.
T Consensus 164 ~~~~~a~~~~~~~g~~~i~av~~~ni~G~QFHPE~s~d~r~~~~F~~~v~ 213 (218)
T d2abwa1 164 EVKVLATFSHESYGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVK 213 (218)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEESSCGGGSSCCHHHHHHHHHHH
T ss_pred ChhhheeeccccCCCeEEEEEecCCEEEEEcCCeecCCchHHHHHHHHHH
Confidence 555554 2 222 48999987 99999999744444 456666553
|
| >d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: HTS-like domain: Homoserine O-succinyltransferase HTS (MetA) species: Bacillus cereus [TaxId: 1396]
Probab=99.01 E-value=3.5e-10 Score=113.40 Aligned_cols=185 Identities=10% Similarity=-0.050 Sum_probs=105.6
Q ss_pred cccccccccceeEeeccc------cHHHHHHhCCc---eE--EEeCCCCCccccccC-CCCCcccc----ccCCCeEEEC
Q 007779 40 DGNRLIGRRIRLTVKADL------DSALIDQLGLK---ES--DIINPAISSSYRSSK-LPKPNQTL----LEAQAKVCTG 103 (590)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~------d~~~~~~lg~~---~~--v~rnd~~~~~~~~~~-~~~~~~~~----~~~~~~ivls 103 (590)
..+|-| |+++|.++... +.|+++.||.. +. -++-+.-........ +...+.+. .+.+||+||+
T Consensus 12 a~~qdi-rpL~I~iLNlMP~k~~TE~qf~rll~~~~~qv~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~~~~fDglIIT 90 (281)
T d2ghra1 12 AETQDI-RALKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIIT 90 (281)
T ss_dssp CCCTTS-CCEEEEEECCCSSHHHHHHHHHHHTTSSSSCEEEEEECCCC------------CCEECHHHHTTCCEEEEEEC
T ss_pred hhhcCc-ceeEEEEEecCCcchhhHHHHHHHhcCCcceEEEEEeeecccccCCccHHHHHhcchhHHHhhcccCCEEEEe
Confidence 356677 66688888432 44888888743 22 222221100000000 01111111 2358999999
Q ss_pred CCCCCCCCchhh---hhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc-----------CC--c
Q 007779 104 PTQTRPLREDEA---FKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS-----------EG--E 165 (590)
Q Consensus 104 pGPg~P~~~~~~---g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s-----------~~--~ 165 (590)
.+|-.-.+.++. ..+.++ ++.+. ..+|+|| |+|||++++++||.+.+..+....|... .| +
T Consensus 91 Gap~~~~~fedv~y~~eL~ei-i~~a~~~~~~~lgiCwGaQa~~~~lgGi~k~~~~~k~~Gv~~~~~~~~~~pL~~g~~d 169 (281)
T d2ghra1 91 GAPVETLSFEEVDYWEELKRI-MEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLKEKMFGVFEHEVREQHVKLLQGFDE 169 (281)
T ss_dssp CCSCTTSCGGGSTTHHHHHHH-HHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCSSCGGGTTCCS
T ss_pred CCCCCcccccccccHHHHHHH-HHHHHhcCCCeEEEcHHHHHHHHHhCCCccccCCCceEEEEEEeeccCCChhccCCcc
Confidence 999664333342 445555 66543 3589999 9999999999999888762343444332 12 2
Q ss_pred eeEEeccchhcc--c--cCCCcEEEEe-ecCCcEEEEEcC----CCCcccCCCchhhHHHHHHHHhhcCC
Q 007779 166 RRAMNTFWPLLM--R--ALPPDVIFIA-DPEGSIMGGGGS----IGPHYSGNDPREMRLVGALREVLAGG 226 (590)
Q Consensus 166 ~~~~~ryHsl~v--~--~~p~~l~v~a-~~~g~im~~~h~----~gvQfHPEs~~~m~L~~~L~kl~~G~ 226 (590)
.|.+-..|.-.+ + ..++++.+++ +++.-+..+..+ +++|+|||=....-..++.|.+..|.
T Consensus 170 ~f~~p~Sr~~~~~~d~v~~~p~l~vLa~S~~~g~~~~~~~~~~~~~iQgHPEYd~~tL~~EY~RD~~~g~ 239 (281)
T d2ghra1 170 LFFAPHSRHTEVRESDIREVKELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRDKGL 239 (281)
T ss_dssp EEEEEEEEEEECCHHHHHTCTTEEEEEEETTTEEEEEEEGGGTEEEECSCTTCCTTHHHHHHHHHHHTTC
T ss_pred hhheeeeecccCCHHHHhhCCCceEEeecCCcccEEEEECCCCEEEEeCCCCcchhHHHHHHHHHHHcCC
Confidence 444433332222 2 3456788888 665544444433 99999999754444667888887775
|
| >d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: CTP synthase PyrG, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=2.8e-09 Score=104.77 Aligned_cols=124 Identities=6% Similarity=-0.038 Sum_probs=80.0
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhc-CCCCccc-ccchHHHHhHhCceeeccCCCCcCcccc---------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------- 162 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~-~~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------- 162 (590)
+..+|||++-||=|.-- --|+ +.. ++.++ .++|+|| |||+|.+.-.|.-.|... +.-.+....
T Consensus 55 L~~~dGIlvPGGFG~RG---~eGk-i~a-i~yARen~iPfLGIClGmQ~avIE~ARnvlg~-~~A~S~Ef~p~t~~pvi~ 128 (258)
T d1s1ma1 55 LKGLDAILVPGGFGYRG---VEGM-ITT-ARFARENNIPYLGICLGMQVALIDYARHVANM-ENANSTEFVPDCKYPVVA 128 (258)
T ss_dssp TTTCSEEEECCCCSSTT---HHHH-HHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHHCC-TTCEETTTCSSCSCEEEE
T ss_pred ccccccEEeecccCcCC---HHHH-HHH-HHHHHHcCccHHHHHHHHHHHHHHHHHHhCCC-CCCcCCCCCCCCCCCEEE
Confidence 66789999999988765 4455 344 55544 4699999 999999999997766543 211111000
Q ss_pred -----------------------------------C--------Cc-eeEEeccchhcccc------CCCcEEEEe-ecC
Q 007779 163 -----------------------------------E--------GE-RRAMNTFWPLLMRA------LPPDVIFIA-DPE 191 (590)
Q Consensus 163 -----------------------------------~--------~~-~~~~~ryHsl~v~~------~p~~l~v~a-~~~ 191 (590)
+ ++ .+.--.-|.|.|+. ....|.|++ ++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~GgTmrlG~~~~~l~~~s~~~~~Y~~~~i~ERHRHRYevN~~y~~~le~~gl~~sG~s~d 208 (258)
T d1s1ma1 129 LITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGD 208 (258)
T ss_dssp CTTTCCCTTSCCC----------CCEEEEEEEEECTTCHHHHHTTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSS
T ss_pred ecccccccCCceeEeecccCccccccCcccchhhhhHHHHHHhcCcceehhhhhcchhhhhhhhhhhhcCCceeeeecCC
Confidence 0 11 22223457777742 245799999 888
Q ss_pred Cc-EEEEEcC-----CCCcccCCC---chh--hHHHHHHHHhh
Q 007779 192 GS-IMGGGGS-----IGPHYSGND---PRE--MRLVGALREVL 223 (590)
Q Consensus 192 g~-im~~~h~-----~gvQfHPEs---~~~--m~L~~~L~kl~ 223 (590)
|. |+++..+ .|+|||||= +.. .-+..||+...
T Consensus 209 g~~vEiiEl~~HPffvg~QfHPEf~Srp~~p~PLF~~Fi~Aa~ 251 (258)
T d1s1ma1 209 DQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAAS 251 (258)
T ss_dssp SCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCeEEEecCCccccCCCCCCChHHHHHHHHHH
Confidence 74 8888876 899999994 221 12666766543
|
| >d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: CTP synthase PyrG, C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.67 E-value=6.2e-09 Score=101.97 Aligned_cols=123 Identities=11% Similarity=0.022 Sum_probs=80.0
Q ss_pred ccCCCeEEECCCCCCCCCchhhhhHHHHHHHHhcC-CCCccc-ccchHHHHhHhCceeeccCCCCcCcccc---------
Q 007779 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS--------- 162 (590)
Q Consensus 94 ~~~~~~ivlspGPg~P~~~~~~g~~~~~~i~~~~~-~~PilG-CLGhQ~i~~~~G~~v~~~~~~~~hG~~s--------- 162 (590)
+...|||++-||.|.-- --|+ +.. ++.++. ++|+|| |||+|.+.-.|.-.|..+ +.-.|+...
T Consensus 56 L~~~dGIlvPGGFG~rG---~eGk-i~a-i~yARen~iPfLGIClGmQ~avIEfARnvlgl-~~A~s~Ef~~~~~~pvi~ 129 (250)
T d1vcoa1 56 FRDVSGILVPGGFGVRG---IEGK-VRA-AQYARERKIPYLGICLGLQIAVIEFARNVAGL-KGANSTEFDPHTPHPVID 129 (250)
T ss_dssp TTTCSCEEECCCCSSTT---HHHH-HHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHTSCC-TTCEETTTCTTCSCEEEE
T ss_pred HhcCCeEEecCCCCccc---hHHH-HHH-HHHHHHcchhHHHHHHHHHHHHHHHHHHHHHh-hcccccccCCCCCCeEEE
Confidence 66779999999999765 3344 344 555543 699999 999999999998877766 443333321
Q ss_pred ------C-----C----------------------c-eeEEeccchhccc-----cC-CCcEEEEe-ecC------CcEE
Q 007779 163 ------E-----G----------------------E-RRAMNTFWPLLMR-----AL-PPDVIFIA-DPE------GSIM 195 (590)
Q Consensus 163 ------~-----~----------------------~-~~~~~ryHsl~v~-----~~-p~~l~v~a-~~~------g~im 195 (590)
+ | + .+.--.-|.|.|+ .+ -..|.+++ ++| +.|+
T Consensus 130 ~~~e~~~~~~~ggtmRLG~~~~~l~~~S~~~~~Y~~~~i~ERhRHRYevN~~y~~~le~~gl~~sg~~~d~~~~~~~lvE 209 (250)
T d1vcoa1 130 LMPEQLEVEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVE 209 (250)
T ss_dssp ESCGGGCC---CCCCEEEEEEEEECTTSHHHHHHCCSEEEEEEEESEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEE
T ss_pred eeccceeccccCccccccceeeeecCCcHHHhhccccEEeehcccceeechhhhHHHHhccccccccCcccccCCCCeEE
Confidence 0 1 1 2333345777773 22 23699998 654 4577
Q ss_pred EEEcC-----CCCcccCCC---chh-h-HHHHHHHHh
Q 007779 196 GGGGS-----IGPHYSGND---PRE-M-RLVGALREV 222 (590)
Q Consensus 196 ~~~h~-----~gvQfHPEs---~~~-m-~L~~~L~kl 222 (590)
++..+ .|||||||= +.. . -+..||+..
T Consensus 210 iiEl~~HPffvgvQfHPEf~Srp~~phPLF~~fi~Aa 246 (250)
T d1vcoa1 210 AIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAA 246 (250)
T ss_dssp EEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHH
T ss_pred EEECCCCCcEEEecCCccccCCCCCCCccHHHHHHHH
Confidence 87765 699999994 211 1 266666554
|
| >d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Catalase, C-terminal domain domain: Catalase, C-terminal domain species: Neurospora crassa [TaxId: 5141]
Probab=94.68 E-value=0.012 Score=52.79 Aligned_cols=98 Identities=10% Similarity=-0.017 Sum_probs=64.9
Q ss_pred cccceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCcccc----ccCCCeEEECCCCCCCCCchh
Q 007779 46 GRRIRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTL----LEAQAKVCTGPTQTRPLREDE 114 (590)
Q Consensus 46 ~~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~----~~~~~~ivlspGPg~P~~~~~ 114 (590)
|||+.|++-|.|+. ..|++.|.++.++-.+.-.+.........++.+. ...||++++-+|++.+....+
T Consensus 3 ~rkI~ilv~dG~~~~e~~~~~~~l~~ag~~v~ivs~~~~~v~~~~g~~v~~d~~~~~~~~~~~dalivpgg~~~~~~~~~ 82 (184)
T d1sy7a1 3 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSK 82 (184)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHT
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHCCCEEEEEEecCCcccccccccccccccccccccccceEEEEeecccccccccc
Confidence 68999999999986 6677789998887654322211111011122221 224789999888877654334
Q ss_pred hhhHHHHHHHH-hcCCCCccc-ccchHHHHhH
Q 007779 115 AFKVLDTILRS-AKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 115 ~g~~~~~~i~~-~~~~~PilG-CLGhQ~i~~~ 144 (590)
...+++. +++ +....||.+ |-|-+.|+++
T Consensus 83 ~~~~~~~-l~~~~~~~k~i~aic~G~~~La~a 113 (184)
T d1sy7a1 83 NGRALHW-IREAFGHLKAIGATGEAVDLVAKA 113 (184)
T ss_dssp CHHHHHH-HHHHHHTTCEEEEETTHHHHHHHH
T ss_pred ccchhHH-HHHHHhcCCceEEechHHHHHHHc
Confidence 4567888 666 455689999 9999999986
|
| >d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Catalase, C-terminal domain domain: Catalase, C-terminal domain species: Escherichia coli, HPII [TaxId: 562]
Probab=91.03 E-value=0.14 Score=44.80 Aligned_cols=97 Identities=7% Similarity=-0.033 Sum_probs=60.0
Q ss_pred cccceeEeeccccH-------HHHHHhCCceEEEeCCCCCccccccCCCCCcccc----ccCCCeEEECCCCCCCCCchh
Q 007779 46 GRRIRLTVKADLDS-------ALIDQLGLKESDIINPAISSSYRSSKLPKPNQTL----LEAQAKVCTGPTQTRPLREDE 114 (590)
Q Consensus 46 ~~~~~~~~~~~~d~-------~~~~~lg~~~~v~rnd~~~~~~~~~~~~~~~~~~----~~~~~~ivlspGPg~P~~~~~ 114 (590)
|||+-|++-+-|+. ..|++.|.++.++-.+.=.+.-.......++.+. ...||+|+|-.|++. ....
T Consensus 3 grkVaiLv~dg~~~~e~~~~~~~l~~ag~~v~~v~~~~~~v~~~~G~~i~~d~t~~~~~~~~yDaliiPGG~~~--~l~~ 80 (156)
T d1p80a1 3 GRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIA--DIAD 80 (156)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCSCTH--HHHT
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecccccccccceeEEeeeeeeccCCcccCCEEEeeCCchH--HHhc
Confidence 78999999999987 6677779988877544211110000001122222 225799999666432 2223
Q ss_pred hhhHHHHHHHHhcCCCCccc-ccchHHHHhH
Q 007779 115 AFKVLDTILRSAKGDLKDEE-EVSKAQLGAF 144 (590)
Q Consensus 115 ~g~~~~~~i~~~~~~~PilG-CLGhQ~i~~~ 144 (590)
....+++|-+.+...+||-. |=|-+.|+.+
T Consensus 81 ~~~~~~~i~e~~~~~K~I~aic~g~~~La~a 111 (156)
T d1p80a1 81 NGDANYYLMEAYKHLKPIALAGDARKFKATI 111 (156)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEGGGGGGGGTT
T ss_pred chHHHHHHHHHHHcCCeEEEECchHHHHHHc
Confidence 35567773444666799999 9999999766
|