Citrus Sinensis ID: 007857
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | 2.2.26 [Sep-21-2011] | |||||||
| Q43866 | 584 | Beta-fructofuranosidase, | yes | no | 0.945 | 0.950 | 0.572 | 0.0 | |
| Q67XZ3 | 594 | Beta-fructofuranosidase, | no | no | 0.902 | 0.892 | 0.564 | 0.0 | |
| Q70XE6 | 606 | Fructan 6-exohydrolase OS | N/A | no | 0.902 | 0.874 | 0.561 | 0.0 | |
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.959 | 0.951 | 0.538 | 1e-179 | |
| Q8W4S6 | 550 | Beta-fructofuranosidase, | no | no | 0.916 | 0.978 | 0.538 | 1e-172 | |
| Q1PEF8 | 590 | Beta-fructofuranosidase, | no | no | 0.965 | 0.961 | 0.522 | 1e-171 | |
| Q9LIB9 | 572 | Beta-fructofuranosidase, | no | no | 0.892 | 0.916 | 0.544 | 1e-170 | |
| Q8W413 | 591 | Beta-fructofuranosidase, | no | no | 0.925 | 0.918 | 0.524 | 1e-168 | |
| Q43089 | 555 | Beta-fructofuranosidase, | N/A | no | 0.926 | 0.980 | 0.533 | 1e-167 | |
| Q0JDC6 | 586 | Beta-fructofuranosidase, | yes | no | 0.972 | 0.974 | 0.497 | 1e-167 |
| >sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/568 (57%), Positives = 417/568 (73%), Gaps = 13/568 (2%)
Query: 24 IANGAHQSEACYGTNQKL-QSLQVSAPA-NQPYLTSYHFRPPQNWINDPNGPMYYKGVYH 81
I N EA + ++L QS +P+ NQPY T +HF+PP+NW+NDPNGPM YKG+YH
Sbjct: 19 IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYH 78
Query: 82 LFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141
LFYQ+NP G ++G+ ++WAHS S DLINW A+ PS P+DIN CWSGS TILP KP
Sbjct: 79 LFYQWNPKGAVWGN-IVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKP 137
Query: 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAW 199
ILYTGID QQVQN+A P+NLSDP L++W K NP+M P NG+ FRDPTTAW
Sbjct: 138 VILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAW 197
Query: 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSING 259
D +WRV++G +I G+A Y S DF+ W K PL+ +GMWECPD FPV+ G
Sbjct: 198 LGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFG 257
Query: 260 TIGVDTSVL---NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYD 316
+ GV+TS N +KHVLK SL KHDYY +GTYD D F PD F + RYD
Sbjct: 258 SNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYD 317
Query: 317 YGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQW 376
YGK+YASKTFFDSAKNRR+LW W NES S +DD++KGWSG+QT+PR IWLD+SGKQL+QW
Sbjct: 318 YGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQW 377
Query: 377 PVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVD 435
PV E+E LR KQV ++ +K L SGS +EV G+TA+Q DVE+ F++ +LE+A++ +P+W D
Sbjct: 378 PVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTD 437
Query: 436 PQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQ---NKYVVLMCSDHSRS 492
PQ +C+ N S++ GPFGL++LA+++L E T+++FRIFK + NKYVVLMCSD SRS
Sbjct: 438 PQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRS 497
Query: 493 SLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEA 552
SLKED DKTTYGAFVDI+PH +SLR+L+DHS+VESF +G+ CIT+RVYPK+A+ +
Sbjct: 498 SLKEDNDKTTYGAFVDINPHQ-PLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSS 556
Query: 553 HLFAFNNGTQSVVISSLNAWNMNQARLS 580
HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 557 HLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
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Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q67XZ3|INV3_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV3 OS=Arabidopsis thaliana GN=CWINV3 PE=1 SV=2 | Back alignment and function description |
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Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/540 (56%), Positives = 398/540 (73%), Gaps = 10/540 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T YHF+P +NW+NDPNGPM YKG+YHLFYQYNP G ++ +++W HS S DL+NW
Sbjct: 35 NQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNW 94
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
I A PS P DIN CWSGSVTILP KP ILYTGID + QVQN+A+P N+SDP L+
Sbjct: 95 ISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLR 154
Query: 171 DWVKFSGNPVMT--PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWD 227
+W K NP+MT NG+ D FRDPTTAW DG WRV+VG D+ G+A +Y S D
Sbjct: 155 EWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRD 214
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTS-VLNPGVKHVLKTSLFSDKHD 286
F +WT+ PL+ TGMWECPD FPVSI G+ GV+TS V G+KHVLK SL HD
Sbjct: 215 FFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHD 274
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G+YD + D++ PD F N + R DYGK+YASKTF+D K RR+LW W NES
Sbjct: 275 YYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPA 334
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+DDI+KGWSG+Q+ PR IWLD+SGK+L+QWP+EEIETLRG+QV+ K L +GS ++V G
Sbjct: 335 KDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHG 394
Query: 407 ITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTE 466
+TA+Q DVE+ F++ ELE+A++ +P+W DPQ++C+ + S+ GPFGL++LA+ D+ E
Sbjct: 395 VTAAQADVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEE 454
Query: 467 KTAIFFRIFKG------QNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRS 520
T+++FRIFK + KYVVLMCSD SRSSL ++ DK+T+GAFV IDP H +SLR+
Sbjct: 455 YTSVYFRIFKSNDDTNKKTKYVVLMCSDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRT 514
Query: 521 LVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
L+DHSIVES+ G+TCIT+RVYPK+A+ A+LF FN GTQSV I +L+AW++ A+++
Sbjct: 515 LIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDILTLSAWSLKSAQIN 574
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6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase OS=Beta vulgaris GN=6-FEH PE=1 SV=1 | Back alignment and function description |
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Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/534 (56%), Positives = 385/534 (72%), Gaps = 4/534 (0%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+ PY T+YHF+ P+NW+NDPNGPM YKG+YHLFYQY P P++ +++W HS S DLINW
Sbjct: 52 DDPYRTAYHFQSPKNWMNDPNGPMIYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINW 111
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
AL PS PYDIN CWSGS+TILP +KP ILYTGI+ QVQNLA+P+NLSDP LK
Sbjct: 112 TQQPIALSPSEPYDINGCWSGSITILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLK 171
Query: 171 DWVKFSGNPVM----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226
+W+K NP+M T N + FRDP+TAWQ DG+WRV+VG Q G+A ++ S
Sbjct: 172 EWIKLPQNPLMAGTPTNNNNINASSFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSD 231
Query: 227 DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286
DF+ W +PL+S + G+WECPD FPV + ++G DTS++ VKHVLK SLF +++
Sbjct: 232 DFVKWNNTGNPLHSTEGNGIWECPDFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYE 291
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G YD + DI+ PD + LRYDYGKFYASK+FFD NRR+LW W NES
Sbjct: 292 YYTIGRYDIEKDIYVPDEGSIESDLGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQ 351
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
DDI KGWSGVQ +PR + LDKSGKQLVQWP+ E++ LR V + + + GS+VE+S
Sbjct: 352 ADDIKKGWSGVQAIPRTVVLDKSGKQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQ 411
Query: 407 ITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTE 466
ITASQ DVEI F++PE E D +PQ LC+ K ASI+GRFGPFGLL LA+ L E
Sbjct: 412 ITASQADVEISFKIPESNYVEELDSTCTNPQILCSQKGASIKGRFGPFGLLTLASMGLEE 471
Query: 467 KTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSI 526
TA+FFRIFKG NKYVVLMCSD +RSSL DK ++G FVD+DP + +SLR L+DHSI
Sbjct: 472 YTAVFFRIFKGPNKYVVLMCSDQTRSSLNPTTDKLSFGIFVDVDPINEDLSLRILIDHSI 531
Query: 527 VESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
VESF+A+GK+CIT RVYP +A+ ++A L+ FNNGT+ V I+ L+AW+M +A+++
Sbjct: 532 VESFSAKGKSCITARVYPTMAINDKAKLYVFNNGTEDVKITKLSAWSMKKAQIN 585
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Hydrolyzes levan-type beta-(2->6)-linked fructans to fructose, but not inulin-type beta-(2->1)-linked fructans. Beta vulgaris (taxid: 161934) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 4 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function description |
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Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 309/574 (53%), Positives = 396/574 (68%), Gaps = 11/574 (1%)
Query: 12 PALMVLLCCFLLIANGAHQS--EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIND 69
P L LL L+ H + EA + + LQS+ Q + T YHF+P QNWIND
Sbjct: 16 PFLQSLLAILLVTTTTLHINGVEAFHEIHYNLQSVGAEN-VKQVHRTGYHFQPKQNWIND 74
Query: 70 PNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129
PNGPMYYKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS P+D C
Sbjct: 75 PNGPMYYKGVYHLFYQYNPKGAVWGN-IVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCR 133
Query: 130 SGSVTILPGDKPFILYTGI---DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNG 186
SGS TILPG+KP ILYTGI QVQN A+P NLSDP L+ W+K NP++ NG
Sbjct: 134 SGSATILPGNKPVILYTGIVEGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNG 193
Query: 187 VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW G W++LVG + + G+A++Y S DFI WTK HP++S TGM
Sbjct: 194 ENATAFRDPTTAWLDKSGHWKMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGM 253
Query: 247 WECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDF 306
WECPD FPVS+ G G+DTSV VKHVLK SL +++YY +GTY D + PD
Sbjct: 254 WECPDFFPVSLKGLNGLDTSVTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTS 313
Query: 307 HGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL 366
LRYDYG FYASKTFFD +KNRR+LW WANESDST D+ KGW+G+Q +PR +WL
Sbjct: 314 VDGWAGLRYDYGNFYASKTFFDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWL 373
Query: 367 DKSGKQLVQWPVEEIETLRGKQVSIHDKE-LGSGSIVEVSGITASQVDVEIDFELPELEE 425
D SGKQL+QWP+EE+ETLRG +V K+ L G +VEV GITA+Q DVE+ F L +
Sbjct: 374 DPSGKQLMQWPIEELETLRGSKVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAK 433
Query: 426 AELFDPAWV--DPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVV 483
E FDP W+ D +++C+ K +++QG GPFGLL LA+E L E T +FFR+FK QN + V
Sbjct: 434 REPFDPKWLEYDAEKICSLKGSTVQGGVGPFGLLTLASEKLEEYTPVFFRVFKAQNTHKV 493
Query: 484 LMCSDHSRSSLKEDLDKTTYGAFVDID-PHHGKVSLRSLVDHSIVESFAARGKTCITTRV 542
LMCSD +RSSLKE L + ++ FVD+D K+SLRSL+D+S+VESF A+GKTCI++RV
Sbjct: 494 LMCSDATRSSLKEGLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRV 553
Query: 543 YPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576
YP +AV AHL+ FNNG++++ + +L+AW+M +
Sbjct: 554 YPTLAVYENAHLYVFNNGSETITVENLDAWSMKK 587
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May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W4S6|INV6_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV6 OS=Arabidopsis thaliana GN=CWINV6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/550 (53%), Positives = 389/550 (70%), Gaps = 12/550 (2%)
Query: 42 QSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWA 100
Q+L +A N+ TS+HF+P +NW+NDPN PMYYKG YHLFYQ NPL P F ++IW
Sbjct: 7 QNLLQTAVLNR---TSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWG 63
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASG-QQVQNLA 159
HSVS D++NWI L AL PS +DINSCWSGS TILP +P ILYTG+D + QQV +A
Sbjct: 64 HSVSQDMVNWIQLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVA 123
Query: 160 MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--E 217
P+++SDPLL++WVK NPVM PP+ V + FRDPT AW+ DG+WRVL+G + + +
Sbjct: 124 EPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEK 183
Query: 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLK 277
GMA +Y S DF+ WTK PL + TGMWECPD FPVSI G GVDTSV N V+HVLK
Sbjct: 184 GMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLK 243
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLW 337
S +D YV+G Y + + FS D +F S DLRYD+G FYASK FFDS KNRR+ W
Sbjct: 244 ASF--GGNDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINW 301
Query: 338 AWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHD-KEL 396
W E+DS +DD KGW+G+ T+PR IW+D SGK+L+QWP+EEI LR K VS+ D E
Sbjct: 302 GWVIETDSKEDDFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEF 361
Query: 397 GSGSIVEVSGITASQVDVEIDFELPELEE-AELFDPAWVDPQQLCNDKNASIQGRFGPFG 455
+GS E+SGITA+Q DVE+ F LP LE E+ D VD L D+++S+ +GPFG
Sbjct: 362 KTGSTFEISGITAAQADVEVTFNLPFLENNPEILDADQVDDATLF-DRDSSVGCVYGPFG 420
Query: 456 LLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGK 515
LL LA+ DL+E+TAIFF++ + N Y V+MCS RSSL++++ K+++GAF+DIDP H K
Sbjct: 421 LLALASSDLSEQTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPRHEK 480
Query: 516 VSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMN 575
+SLR L+DHSI+ES+ GKT IT+RVYPK+A+ A L+ FN+G V+++SL AW+M
Sbjct: 481 ISLRCLIDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMR 540
Query: 576 QARLSEEESF 585
A+++ ++
Sbjct: 541 NAQINSNPTY 550
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6 and 1-fructan exohydrolase that can degrade both inulin and levan-type fructans, such as phlein, levan, neokestose, levanbiose, 6-kestose, 1-kestose, inulin, and 1,1-nystose. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|Q1PEF8|INV2_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV2 OS=Arabidopsis thaliana GN=CWINV2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 304/582 (52%), Positives = 394/582 (67%), Gaps = 15/582 (2%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQP-YLTSYHFRPPQNWI 67
M++P +L +LI + +A + +KLQS S + P + T+YHF+PP++WI
Sbjct: 1 MSAPKFGYVLLLIVLINISNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRHWI 60
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127
NDPN PM YKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS +DIN
Sbjct: 61 NDPNAPMLYKGVYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPAIYPSKWFDING 119
Query: 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187
WSGS T +PG P ILYTGI + Q+QN A+P++LSDP LK W+K NP++ P NG
Sbjct: 120 TWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGE 179
Query: 188 KDDMFRDPTTAW-QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW DG WR+LVG + N G+A++Y S DF W K P++S ++TGM
Sbjct: 180 NGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGM 239
Query: 247 WECPDIFPVSI-NGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ + G+D S P KHVLK SL +++YY LGTYD + D + PD
Sbjct: 240 WECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGY 299
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
+ LR+DYG +YASKTFFD NRR+LW WANESD+ QDD KGW+G+Q +PR I
Sbjct: 300 TPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTIL 359
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEE 425
LD SGKQLV WP+EEIE+LRGK V + ++++ G EV GIT +QVDV++ F + LE+
Sbjct: 360 LDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLEK 419
Query: 426 AELFDPAW-VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFK--GQNKYV 482
AE FD ++ P +LCN K +++ G GPFGL+ LAT DL E T +FFR+FK NK
Sbjct: 420 AEKFDESFATKPLELCNLKGSNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNKPK 479
Query: 483 VLMCSDHSRSSLKED--------LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARG 534
VLMCSD SSLK+D + K ++ FVD+ GK+SLRSL+DHS+VESF A+G
Sbjct: 480 VLMCSDAKPSSLKKDTGTDAKERMYKPSFAGFVDVGLLDGKISLRSLIDHSVVESFGAKG 539
Query: 535 KTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576
KT IT+RVYP AV +AHLF FNNG+Q V + SLNAWNM +
Sbjct: 540 KTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNAWNMQK 581
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9LIB9|INV5_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 597 bits (1540), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/536 (54%), Positives = 381/536 (71%), Gaps = 12/536 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWAHSVSYDLIN 109
NQPY T YHF+PP+NW+NDPNGPM YKG+YHLFYQ+N G + +K +W H+ S DLIN
Sbjct: 39 NQPYRTGYHFQPPKNWMNDPNGPMIYKGIYHLFYQWNQNGAVMDVNKTVWGHATSTDLIN 98
Query: 110 WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLL 169
WI LS A+ PS P DIN CWSGSVTILP KP ILYTG D +QVQNL P+NL+DP L
Sbjct: 99 WITLSPAIRPSRPSDINGCWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYL 158
Query: 170 KDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227
+ W K NP++TP N + FRDPTTAW DGRWR+ G Q G+A ++ S D
Sbjct: 159 RHWTKSPENPLVTPSPVNHINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKD 218
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLN-PGVKHVLKTSLFSDKHD 286
F+ W + PL+ TGMWECPD FPV+ + G+DTS + P VKHVLK SL +D
Sbjct: 219 FVIWKQSPKPLHYHDGTGMWECPDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFND 278
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +GTYD D++ PD F + RYDYGKFYASKTF+DS RR+LW W NES
Sbjct: 279 YYTIGTYDEVRDVYVPDKGFVQDETAPRYDYGKFYASKTFYDSVNQRRILWGWVNESSPE 338
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+D+I KGW+G+Q +PR +WLD+SGK+LVQWPV+EIE LR QV +K L GS++EV G
Sbjct: 339 KDNIKKGWAGLQAIPRKVWLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHG 398
Query: 407 ITASQVDVEIDFELP--ELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
+TA Q DVE+ F++ +LE+A++ +P W DPQ +C+ +NAS GPFGL++LA++++
Sbjct: 399 VTAPQADVEVFFKVSGFDLEKADVIEPGWTDPQLICSQRNAS--SGLGPFGLMVLASKNM 456
Query: 465 TEKTAIFFRIFK-GQN--KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T++ RIF+ G+N ++VV+MCSD S SSL++ DKTTYGAF+DI P+ +SLR+L
Sbjct: 457 EEYTSVNIRIFRAGENSKEHVVVMCSDQSTSSLEKGNDKTTYGAFLDISPYQ-PISLRTL 515
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
+D SIVESF +GKTCIT+RVYPK+A+ HLFAFN G+Q+V + SL+AW+M +
Sbjct: 516 IDKSIVESFGGKGKTCITSRVYPKLAIGERTHLFAFNKGSQNVNVLSLSAWSMKSS 571
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W413|INV4_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana GN=CWINV4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 590 bits (1522), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/557 (52%), Positives = 385/557 (69%), Gaps = 14/557 (2%)
Query: 32 EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGP 91
+A + ++LQS V + N + S+HF+PP++WINDPNGP+YYKG+YHLFYQYN G
Sbjct: 28 DAFHQIYEELQSESVES-VNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGA 86
Query: 92 LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151
++G+ +IWAHSVS DL+NW L AL PS +DI WSGS+TI+PG P ILYTG++ +
Sbjct: 87 VWGN-IIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQN 145
Query: 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211
Q+QN A+PE+ SDP L+ W+K NP+ P + FRDPTTAW + DG WR +VG
Sbjct: 146 ETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYTMNGSAFRDPTTAWFSKDGHWRTVVG 205
Query: 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSING-TIGVDTSVLNP 270
+ G+A++Y S DF HW K HP++S Q TGMWECPD FPVS+ G+D + P
Sbjct: 206 SKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVGP 265
Query: 271 GVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSA 330
KHVLK SL +++YY LG YD + D + PD + LR+DYG FYASKTFFD
Sbjct: 266 NTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDYK 325
Query: 331 KNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVS 390
KNRR+LW WANESD+ +DDI KGW+G+Q +PR + LD S KQLV WPVEEIE+LRG V
Sbjct: 326 KNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRGNYVR 385
Query: 391 IHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWV-DPQQLCNDKNASIQG 449
+++ ++ G +EV GIT +Q DVE+ F + LE+AE+FDP++ P +LCN K ++++G
Sbjct: 386 MNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEKAEIFDPSFTWKPLELCNIKGSNVRG 445
Query: 450 RFGPFGLLILATEDLTEKTAIFFRIFK--GQNKYVVLMCSDHSRSSLKED--------LD 499
GPFGL+ LAT DL E T +FFR+F +K VLMCSD SSLK+D +
Sbjct: 446 GVGPFGLITLATPDLEEYTPVFFRVFNDTKTHKPKVLMCSDARPSSLKQDTGLLAKDRMY 505
Query: 500 KTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNN 559
K ++ FVD+D G++SLRSL+DHS+VESF A GKT IT+RVYP AV+ AHL+ FNN
Sbjct: 506 KPSFAGFVDVDMADGRISLRSLIDHSVVESFGALGKTVITSRVYPVKAVKENAHLYVFNN 565
Query: 560 GTQSVVISSLNAWNMNQ 576
GTQ+V I SLNAWNM++
Sbjct: 566 GTQTVTIESLNAWNMDR 582
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 590 bits (1521), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/551 (53%), Positives = 380/551 (68%), Gaps = 7/551 (1%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIN 68
M ++ +L L+ + Y T + L S S +QPY T+YHF+P +NWIN
Sbjct: 1 MAISSIFLLSLFSLIYVIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKNWIN 60
Query: 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128
DPNGPM Y G YHLFYQYNP G ++G+ ++WAHSVS DL+NW L HA+ PS P DI C
Sbjct: 61 DPNGPMRYGGFYHLFYQYNPKGAVWGN-IVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGC 119
Query: 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNG 186
WSGS TILPG KP ILYTGID + QVQN+A+P+N+SDPLL++W K NP+M P N
Sbjct: 120 WSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIANK 179
Query: 187 VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
+ FRDPTT+W DG WRVL+G +ID +GMA +Y S +F+ W + HPL+S + TGM
Sbjct: 180 INSSSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGTGM 239
Query: 247 WECPDIFPVSINGTI--GVDTSVL-NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPD 303
WECPD +PV + GVDTS + V+HVLK SL KHD+Y++G+YD D+F P+
Sbjct: 240 WECPDFYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPE 299
Query: 304 TDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRA 363
F N LRYDYGK+YASKTFFD KNRR+L W NES S DD+ KGWSG+ T+PR
Sbjct: 300 NGFEDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPRE 359
Query: 364 IWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPEL 423
IWL +SGKQLVQWPV+EIE LR V+ K + G + ++G+ + Q DVEI FE+ +L
Sbjct: 360 IWLHESGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQADVEISFEISDL 419
Query: 424 EEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVV 483
+ E W+DPQ LC+ K A ++G GPFGLL+ A++ L E TA+FFRIFK Q+K +V
Sbjct: 420 GKVESLR-KWIDPQLLCSQKGAGVKGGVGPFGLLVFASQGLKEYTAVFFRIFKYQDKNLV 478
Query: 484 LMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVY 543
LMCSD SRSSL +D D T+YG FVD+DP H K+SLR+L+DHS+VESF G+ C+T RVY
Sbjct: 479 LMCSDQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTARVY 538
Query: 544 PKVAVENEAHL 554
P +A+ ++A L
Sbjct: 539 PTLAIHDKAML 549
|
Pisum sativum (taxid: 3888) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0JDC6|INV3_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. japonica GN=CIN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 292/587 (49%), Positives = 389/587 (66%), Gaps = 16/587 (2%)
Query: 10 TSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIND 69
T+ A L+ LL A + +LQSL+ + T YHF+PP++WIND
Sbjct: 3 TARARAALVFVALLQMAAVVVVRASHVVYPELQSLEAKH-VDGKLRTGYHFQPPKHWIND 61
Query: 70 PNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129
PNGPMYYKG+YHLFYQYNP G ++G+ + WAHSVS DLI+W L + PS +D CW
Sbjct: 62 PNGPMYYKGLYHLFYQYNPKGAVWGN-IEWAHSVSTDLIDWTALEPGIYPSKTFDEKGCW 120
Query: 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKD 189
SGS T+LP P I+YTGID +QVQN+A P NLSDP L++W K NP++ P G+
Sbjct: 121 SGSATVLPSGVPVIMYTGIDPDERQVQNVAYPVNLSDPYLREWYKPDYNPIINPDGGINA 180
Query: 190 DMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWEC 249
FRDPTTAW PDG WR+LVG +++ +G+A +Y S DF W K HPL+S TGMWEC
Sbjct: 181 SAFRDPTTAWYGPDGHWRLLVGSKVNMKGLAVLYRSRDFKKWVKAHHPLHSAH-TGMWEC 239
Query: 250 PDIFPVSING-----TIGVDTSVLNPG-----VKHVLKTSLFSDKHDYYVLGTYDPQMDI 299
PD FPV++ G GVDT+ L+ VK+VLK SL +++YY +G YD D
Sbjct: 240 PDFFPVAVAGGSRHYRRGVDTAELHDAAVAEEVKYVLKVSLDLTRYEYYTVGWYDHATDR 299
Query: 300 FSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQT 359
+ PD F N LRYDYG FYASK+F+D AK RR++W WANESD+ DD KGW+G+Q
Sbjct: 300 YVPDAAFPDNDYGLRYDYGDFYASKSFYDPAKRRRIVWGWANESDTVPDDRRKGWAGIQA 359
Query: 360 VPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFE 419
+PR +WL GKQLVQWPVEE++ LR K V++ DK + G+ EV+G + Q DV++ F
Sbjct: 360 IPRKLWLSADGKQLVQWPVEELKALRAKHVNVTDKVIKKGNYFEVTGFKSVQSDVDMAFA 419
Query: 420 LPELEEAELFDPAW-VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQ 478
+ +L +AE FDPAW D + LC + + G GPFGL LA+ DL E+TA+FFR+FK
Sbjct: 420 IKDLSKAEEFDPAWRTDAEALCKKLGSDVDGGVGPFGLWALASGDLKERTAVFFRVFKAN 479
Query: 479 N-KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGK-VSLRSLVDHSIVESFAARGKT 536
+ +VVLMC+D +RSS + + + T+ FVD+D K ++LR+L+DHS+VESF ARGKT
Sbjct: 480 DSSHVVLMCNDPTRSSYESKIYRPTFAGFVDVDIAKNKQIALRTLIDHSVVESFGARGKT 539
Query: 537 CITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEE 583
CI TRVYP+ AV ++AHLF FNNG V +++L+AW M +++ EE
Sbjct: 540 CILTRVYPRKAVGDDAHLFVFNNGESDVKVTNLDAWEMKTPKMNAEE 586
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | ||||||
| 224092182 | 573 | predicted protein [Populus trichocarpa] | 0.960 | 0.984 | 0.645 | 0.0 | |
| 384371322 | 592 | cell wall invertase [Manihot esculenta] | 0.972 | 0.964 | 0.654 | 0.0 | |
| 224092180 | 570 | predicted protein [Populus trichocarpa] | 0.952 | 0.980 | 0.612 | 0.0 | |
| 357437395 | 580 | Beta-fructofuranosidase, insoluble isoen | 0.947 | 0.958 | 0.620 | 0.0 | |
| 356552366 | 576 | PREDICTED: beta-fructofuranosidase, inso | 0.960 | 0.979 | 0.598 | 0.0 | |
| 359475944 | 574 | PREDICTED: beta-fructofuranosidase, inso | 0.942 | 0.963 | 0.596 | 0.0 | |
| 53127612 | 578 | fructan 1-exohydrolase [Campanula rapunc | 0.919 | 0.934 | 0.608 | 0.0 | |
| 356562173 | 626 | PREDICTED: fructan 6-exohydrolase-like [ | 0.928 | 0.870 | 0.608 | 0.0 | |
| 449522748 | 575 | PREDICTED: beta-fructofuranosidase, inso | 0.889 | 0.907 | 0.617 | 0.0 | |
| 359475942 | 610 | PREDICTED: beta-fructofuranosidase, inso | 0.942 | 0.906 | 0.579 | 0.0 |
| >gi|224092182|ref|XP_002309497.1| predicted protein [Populus trichocarpa] gi|222855473|gb|EEE93020.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/576 (64%), Positives = 452/576 (78%), Gaps = 12/576 (2%)
Query: 13 ALMVLLCCFLL---IANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIND 69
+V LCC L I A ++ C Q Q V Q Y TS+HF+PP+NW+N
Sbjct: 6 VFLVGLCCVLQSSGIEVEALENNGC----QNFQPHTVMMQEKQSYRTSFHFQPPRNWLN- 60
Query: 70 PNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129
GPM+YKGVYHLFYQYNP G LFGD MIWAHSVSYDLINWIHL+HALCP+ PYDINSCW
Sbjct: 61 --GPMWYKGVYHLFYQYNPYGALFGDFMIWAHSVSYDLINWIHLNHALCPTEPYDINSCW 118
Query: 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKD 189
SGS TILPG P ILYTGIDA+ QVQN+AMP+NLSDP L++W+KF+ NP+MTPP+GV+
Sbjct: 119 SGSATILPGKGPVILYTGIDANHCQVQNMAMPKNLSDPFLEEWIKFAQNPIMTPPDGVEG 178
Query: 190 DMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWEC 249
+ FRDPTTAW + DG+W V++G +N+GMA +Y S DF +WTK PLYS + TGMWEC
Sbjct: 179 NNFRDPTTAWLSHDGKWSVIIGSWNNNQGMAILYRSEDFFNWTKYQDPLYSTERTGMWEC 238
Query: 250 PDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGN 309
PD +PVS+N T GVDTSVLN GVKHV+K S + HDYY++GTY P+++ + PD DF G
Sbjct: 239 PDFYPVSVNSTDGVDTSVLNAGVKHVMKASF--NSHDYYMIGTYVPEIEKYIPDNDFTGT 296
Query: 310 SNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369
DLRYD+GKFYASKTFFDS KNRR+LW W NESDS +DD+DKGWSG+Q++PR IWLD+S
Sbjct: 297 GMDLRYDHGKFYASKTFFDSVKNRRILWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRS 356
Query: 370 GKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELF 429
GKQLVQWP+EEI L GK+VS DK++ S SI EV GITA+Q DVE+ FELPEL+E E
Sbjct: 357 GKQLVQWPIEEINKLHGKKVSFLDKKIDSESIFEVQGITAAQADVEVVFELPELQETEFL 416
Query: 430 DPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDH 489
+ VDPQ LC+D NASI+GR GPFGLL LAT+DLTE+TAIFFRIFKG YVVLMCSD
Sbjct: 417 NLTAVDPQLLCSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKGYVVLMCSDQ 476
Query: 490 SRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVE 549
SRS+L++++DKTTYGAF+DIDP +SLRSL+DHSI+ESF G+ CIT RVYPK+A++
Sbjct: 477 SRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIESFGGEGRACITNRVYPKLAIQ 536
Query: 550 NEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESF 585
EA LF FNNGT SV ISSLNAW+MN+A+++ +E+F
Sbjct: 537 EEARLFIFNNGTLSVTISSLNAWSMNKAQINHKENF 572
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371322|gb|AFH77950.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/576 (65%), Positives = 457/576 (79%), Gaps = 5/576 (0%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIN 68
M + L+ LLC +L NG + +A + Q QS ++ P QPY TSYHF+PP+NW+N
Sbjct: 1 MEAIFLVGLLC--VLFNNGI-EVDASHSEFQNFQSHNLTVPETQPYRTSYHFQPPKNWLN 57
Query: 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128
DPNGPM YKG YHLFYQYNP G LF M+WAHSVS+DLINWIHL+HAL P+ P+DI SC
Sbjct: 58 DPNGPMLYKGFYHLFYQYNPNGALFDAGMVWAHSVSHDLINWIHLNHALYPTEPFDIKSC 117
Query: 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK 188
WSGSVTILPG+KP ILYTGI+A+ QVQNLAMP+NLSDPLLK+W+KFS NPV+TPP GV
Sbjct: 118 WSGSVTILPGNKPAILYTGINANDTQVQNLAMPKNLSDPLLKEWIKFSQNPVITPPTGVA 177
Query: 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
D FRDPTTAW +G+W V+VG I++ GMA +Y S DF++W PL+S ++TGMWE
Sbjct: 178 KDDFRDPTTAWVDAEGKWNVIVGSLINDRGMAILYQSEDFVNWRMYKDPLHSKEKTGMWE 237
Query: 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
CPD FPVSIN T GVDTSV+NP VKHV+K S + HDYY++GTY P + + PDTDF
Sbjct: 238 CPDFFPVSINSTNGVDTSVMNPSVKHVMKASF--NSHDYYIIGTYVPGVQKYIPDTDFTS 295
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
+ DLRYDYGKFYASKTFFDS KNRR+LW W NESDS++DD+ KGWSG+Q+ PR IWL++
Sbjct: 296 TNTDLRYDYGKFYASKTFFDSIKNRRILWGWVNESDSSEDDVRKGWSGLQSFPRQIWLNR 355
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAEL 428
SG QLVQWPVEEI L KQVSI +K+L GS++E+ GITASQ D EI FELPELEEAEL
Sbjct: 356 SGSQLVQWPVEEINKLHDKQVSIQNKKLDGGSVLEIPGITASQADAEIVFELPELEEAEL 415
Query: 429 FDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSD 488
VDPQQ+C D NAS++GR GPFGLL LATEDLTE+TAIFFRIF+ +N Y+VLMCSD
Sbjct: 416 LKSTPVDPQQMCTDANASVRGRLGPFGLLALATEDLTEQTAIFFRIFRHENTYIVLMCSD 475
Query: 489 HSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAV 548
SRSS+KE++DKTTYGAFV+IDP + K+SLRSL+DHSI+ESF G+TCIT+RVYP++AV
Sbjct: 476 QSRSSIKENVDKTTYGAFVNIDPQNEKISLRSLIDHSIIESFGGEGRTCITSRVYPQLAV 535
Query: 549 ENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEES 584
EAHL+ FNNGTQS+ IS L AW M++A+ + EES
Sbjct: 536 HKEAHLYVFNNGTQSITISRLKAWGMSKAQFNYEES 571
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092180|ref|XP_002309496.1| predicted protein [Populus trichocarpa] gi|222855472|gb|EEE93019.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/571 (61%), Positives = 440/571 (77%), Gaps = 12/571 (2%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIN 68
M + V+ C LL+ +G +A + +++ LQ +QPY T YHF+PP+NW+N
Sbjct: 1 MEISVIWVVGFCVLLVDHGV---QASHQSSRNLQE------TDQPYRTGYHFQPPKNWMN 51
Query: 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128
DPNGPMYYKGVYHLFYQYNP G ++G+ +IWAHSVSYDL+NW+H+ HA+ P+ P DIN C
Sbjct: 52 DPNGPMYYKGVYHLFYQYNPDGAVWGN-IIWAHSVSYDLVNWVHIDHAIYPTQPSDINGC 110
Query: 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK 188
WSGS TILPG+KP ILYTGID QVQNLA+P+NLSDPLLK+W K NP+MTP +G+
Sbjct: 111 WSGSTTILPGEKPAILYTGIDTKNHQVQNLAVPKNLSDPLLKEWKKSPYNPLMTPIDGID 170
Query: 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
D++RDPTTAWQ PD WRV+VG QI+ G A +Y S DF++WT++D PL+S +T MWE
Sbjct: 171 PDLYRDPTTAWQGPDKIWRVIVGSQINGHGRAILYRSKDFVNWTRIDSPLHSSGKTEMWE 230
Query: 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
CPD FPVS + T GVDTS + KHVLK S + HDYY+LG+Y P+ D FS +T+F
Sbjct: 231 CPDFFPVSTSSTNGVDTSSQDKSTKHVLKASF--NHHDYYILGSYMPENDKFSVETNFMD 288
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
+ DLRYDYGKFYASKTFFD A NRR+LW W NESDS DDI KGWSG+Q++PR + L K
Sbjct: 289 SGVDLRYDYGKFYASKTFFDGAMNRRILWGWINESDSESDDIKKGWSGLQSIPRTVLLSK 348
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAEL 428
+GKQ+VQWPV+EIE LR K VS HDK+L SGS++EV GITASQ DV++ FEL LE+AE+
Sbjct: 349 NGKQIVQWPVKEIEKLRSKNVSFHDKKLKSGSVLEVPGITASQADVDVSFELLNLEDAEI 408
Query: 429 FDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSD 488
DP+W DPQ LC+ K AS++G+ GPFGLL AT+DL E+TAI+FRIF+ +KY+VLMCSD
Sbjct: 409 LDPSWTDPQLLCSQKKASVRGKLGPFGLLAFATKDLKEQTAIYFRIFRSNHKYIVLMCSD 468
Query: 489 HSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAV 548
SRSS++E+LDKTTYGAFVD+DP H ++LRSL+DHSIVESF G+ CITTR Y K+A+
Sbjct: 469 QSRSSVREELDKTTYGAFVDMDPRHEIITLRSLIDHSIVESFGGEGRACITTRAYAKLAI 528
Query: 549 ENEAHLFAFNNGTQSVVISSLNAWNMNQARL 579
+A+LFAFNNGT SV IS LNAW+M A++
Sbjct: 529 HKQAYLFAFNNGTSSVKISRLNAWSMKNAQI 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437395|ref|XP_003588973.1| Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Medicago truncatula] gi|355478021|gb|AES59224.1| Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/558 (62%), Positives = 426/558 (76%), Gaps = 2/558 (0%)
Query: 26 NGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQ 85
N + EA +N + ++ P QPY TSYHF+PPQNW+NDPN PMYYKGVYHLFYQ
Sbjct: 18 NSRNGIEASTCSNS-IDPIKYRIPKEQPYRTSYHFQPPQNWMNDPNAPMYYKGVYHLFYQ 76
Query: 86 YNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145
+NPL FGD ++WAHSVSYDLINWIHL+ AL PSGPYDINSCWSGS TILPG+KP ILY
Sbjct: 77 HNPLAATFGDIIVWAHSVSYDLINWIHLNIALEPSGPYDINSCWSGSATILPGEKPAILY 136
Query: 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205
TGID +VQNLA+P+NL+D L++W K NPVMTPP GV++D FRDP+TAW DG+
Sbjct: 137 TGIDHYKNEVQNLAIPKNLTDAFLREWEKHPQNPVMTPPTGVEEDNFRDPSTAWHGKDGK 196
Query: 206 WRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDT 265
WRV+VG Q +EG +Y S DF++WT +P ++ TG+ ECPD FPV IN T GVDT
Sbjct: 197 WRVIVGAQNGDEGKTILYQSEDFVNWTVNPNPFFATDNTGVCECPDFFPVYINSTNGVDT 256
Query: 266 SVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKT 325
SV N V+HVLK S +HDYY LG Y + F PD +F G S DLR+DYGKFYASK+
Sbjct: 257 SVDNSSVRHVLKISYLRKQHDYYFLGKYVSDKENFVPDVEFTGTSKDLRFDYGKFYASKS 316
Query: 326 FFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLR 385
FFD AKNRR+LW W NESDSTQDDI+KGW+G+QT+PR +WLDKSGK+L+QWP+EEIE LR
Sbjct: 317 FFDYAKNRRILWGWVNESDSTQDDIEKGWAGLQTIPRKVWLDKSGKRLMQWPIEEIENLR 376
Query: 386 GKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAE-LFDPAWVDPQQLCNDKN 444
KQ+SI ++L GS +E+SGI SQVDVE+ FELPELE + L DP+ VDPQ LC+ ++
Sbjct: 377 HKQISITGEKLEGGSTLEISGINVSQVDVEVLFELPELESGDWLEDPSEVDPQLLCSKQH 436
Query: 445 ASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYG 504
AS G+ GPFGLL LA++DLTE+TA+ F+IF+ N+Y+ LMCSD SRSSL+ DLDKTTYG
Sbjct: 437 ASRSGKIGPFGLLALASKDLTEETAVSFQIFRASNRYLCLMCSDQSRSSLRNDLDKTTYG 496
Query: 505 AFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSV 564
DIDP+ +SLR+L+D SI+ESF GK IT+RVYP +A+E +AHL+ FNNG+QSV
Sbjct: 497 TIFDIDPNLKTISLRTLIDKSIIESFGDGGKAVITSRVYPLLAIEKDAHLYVFNNGSQSV 556
Query: 565 VISSLNAWNMNQARLSEE 582
VIS LNAW+M QA + E
Sbjct: 557 VISKLNAWSMKQAEIGHE 574
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552366|ref|XP_003544539.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/573 (59%), Positives = 429/573 (74%), Gaps = 9/573 (1%)
Query: 12 PALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPN 71
P L++ + L+ +G G S+ P QPY TSYHF+P QNW+NDPN
Sbjct: 5 PELLLFVIVPFLLNSGN-------GIETSTHSINNRTPEKQPYRTSYHFQPRQNWMNDPN 57
Query: 72 GPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131
GPMYYKGVYHLFYQ+NP FGD+++W HSVSYDLINWIHL++A+ PSGPYD NSCWSG
Sbjct: 58 GPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNAIEPSGPYDNNSCWSG 117
Query: 132 SVTILPG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDD 190
S TI+PG ++P ILYTGID QVQNLAMP NLSDP L++W+K NPVM+PP+GV+ +
Sbjct: 118 SATIIPGKEQPVILYTGIDDKKHQVQNLAMPRNLSDPFLREWIKHPQNPVMSPPSGVEVN 177
Query: 191 MFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECP 250
FRDP+TAWQ DG+WRV++G Q +EG +Y S DF++W +P Y+ TG+ ECP
Sbjct: 178 NFRDPSTAWQGKDGKWRVVIGAQNGDEGKTILYQSEDFVNWKVDPNPFYASDNTGVCECP 237
Query: 251 DIFPVSINGTI-GVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGN 309
D FPV+I+G+ GVDTSV NP V+HVLK S +HDYY LG Y + F PD F G
Sbjct: 238 DFFPVNISGSKNGVDTSVQNPSVRHVLKISYLRKQHDYYFLGKYVSDQENFIPDVRFTGT 297
Query: 310 SNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369
S+DLRYDYGKFYASK+FFD AKNRR+LW W NESDSTQDDI+KGW+G+Q++PR +WLDKS
Sbjct: 298 SSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIEKGWAGLQSIPRQVWLDKS 357
Query: 370 GKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELF 429
GK+LVQWP+EE+E LR K +SI ++L GS +EVSGITASQ DVE+ FELPEL+ AE
Sbjct: 358 GKRLVQWPIEEVEKLRDKHISIMGEKLVYGSNLEVSGITASQADVEVLFELPELQSAEFL 417
Query: 430 DPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDH 489
DP VDPQ LC+ ++AS G GPFGLL LA++DL E TAIFF+I++ N+YV LMC+D
Sbjct: 418 DPDGVDPQLLCSQEDASRSGIIGPFGLLALASKDLKEHTAIFFKIYRAPNRYVGLMCNDQ 477
Query: 490 SRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVE 549
RSS + DLDKT YG DIDP+ +SLRSL+DHSI+ESF G+ CIT+RVYP +A++
Sbjct: 478 RRSSFRHDLDKTAYGTIFDIDPNLKNISLRSLIDHSIIESFGDEGRVCITSRVYPSLAID 537
Query: 550 NEAHLFAFNNGTQSVVISSLNAWNMNQARLSEE 582
+AHL+AFNNG+QSVV+S LNAW+M QA + E
Sbjct: 538 KDAHLYAFNNGSQSVVVSKLNAWSMKQAEIGRE 570
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475944|ref|XP_002278880.2| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/565 (59%), Positives = 439/565 (77%), Gaps = 12/565 (2%)
Query: 16 VLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMY 75
V LC FL A ++EA Y + + LQS P QPY T+YHF+PP+NW+NDPNGPMY
Sbjct: 9 VGLCLFL--ARHGIEAEASYPSCRNLQS----NPTEQPYRTAYHFQPPKNWMNDPNGPMY 62
Query: 76 YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI 135
Y GVYHLFYQYNP ++G+ + WAHS+SYDL+NW+HL HAL P+ P+DIN CW+GS TI
Sbjct: 63 YNGVYHLFYQYNPYAAVWGN-ITWAHSISYDLVNWVHLDHALNPTDPFDINGCWTGSATI 121
Query: 136 LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195
LPG++P I+YTG D +QVQN+A+P+N+SDPLL++W+K NP+M+P NG+ + FRDP
Sbjct: 122 LPGEEPVIIYTGADTQNRQVQNMAVPKNISDPLLREWIKSPRNPLMSPTNGIDANNFRDP 181
Query: 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPV 255
TTAWQ PD WR++VG I++ G A +Y S DF++WTK PL+S +TGMWECPD +PV
Sbjct: 182 TTAWQGPDKVWRIIVGSLINDHGTALLYRSRDFVNWTKSQTPLHSSNKTGMWECPDFYPV 241
Query: 256 SINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRY 315
S GV+TSV N +HVLK S + +DYY++G Y P+ D + +TDF +DLRY
Sbjct: 242 STR--TGVETSVQNADTQHVLKASF--NGNDYYIIGKYVPETDTYLVETDFLDAGSDLRY 297
Query: 316 DYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQ 375
DYG+FYASKTFFD+AK RR+LWAW ESDS+ DI+KGWSG+Q++PR++ LD++G+QLVQ
Sbjct: 298 DYGEFYASKTFFDAAKKRRILWAWIQESDSSSADIEKGWSGLQSIPRSVLLDQTGRQLVQ 357
Query: 376 WPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVD 435
WP++EIE LR QV++ +KE+ GS++EV GITASQVDVE+ F+ P +EAE+ DP+WVD
Sbjct: 358 WPIKEIEELRENQVTLLNKEVRGGSVLEVPGITASQVDVEVSFDFPHFKEAEVLDPSWVD 417
Query: 436 PQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQN-KYVVLMCSDHSRSSL 494
PQ LC KNAS++G GPFGLL+LA++DLTE+TAIFF IFK N KYVVLMCSD SRSS+
Sbjct: 418 PQLLCTQKNASVKGSIGPFGLLVLASKDLTEQTAIFFHIFKTHNKKYVVLMCSDQSRSSV 477
Query: 495 KEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHL 554
++D+DKT+YGAFVDIDP K+SLR L+DHSIVESF G++CIT RVYP++A+ EAHL
Sbjct: 478 RQDVDKTSYGAFVDIDPLREKISLRGLIDHSIVESFGGEGRSCITARVYPELAINKEAHL 537
Query: 555 FAFNNGTQSVVISSLNAWNMNQARL 579
+ FNNGTQSV IS L+AW+M +A +
Sbjct: 538 YVFNNGTQSVKISRLDAWSMKKAEI 562
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53127612|emb|CAD49079.1| fructan 1-exohydrolase [Campanula rapunculoides] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/544 (60%), Positives = 424/544 (77%), Gaps = 4/544 (0%)
Query: 43 SLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHS 102
S+ +S P++QPY T YHF+PPQNW+NDPNGPMYYKGVYH FYQYNP GPLFGD MIW HS
Sbjct: 34 SVHLSLPSDQPYRTGYHFQPPQNWMNDPNGPMYYKGVYHFFYQYNPNGPLFGDIMIWGHS 93
Query: 103 VSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPE 162
VSYDL+NWIH+ A+ P+ P DINSC+SGS T LPG KP +LYTG+D +QVQNLA+P+
Sbjct: 94 VSYDLVNWIHIDPAIYPTDPADINSCFSGSATFLPGYKPVMLYTGLDTEKRQVQNLAVPK 153
Query: 163 NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222
NLSDP L++WVK NP+MT P GVK D FRDP+TAW DG+WRVLVG + ++ G+A++
Sbjct: 154 NLSDPFLREWVKHKANPIMTTPEGVKADDFRDPSTAWLGYDGKWRVLVGSKKNDLGVAYL 213
Query: 223 YWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTS-VLNPGVKHVLKTSLF 281
Y S DF+ W + D+PL S+ ET WECPD FPVS++ T G+DTS V+NPGVKHV+K
Sbjct: 214 YQSKDFVKWERFDYPLMSMMETSTWECPDFFPVSVSSTNGLDTSGVINPGVKHVVKVGF- 272
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
+ D+Y +GT + D + P+ GNS D+RYDYGKFYASK+F+D+AK RRVLW W +
Sbjct: 273 -NGIDWYTIGTLS-ERDNYVPENGLKGNSLDMRYDYGKFYASKSFYDNAKQRRVLWGWIS 330
Query: 342 ESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSI 401
E+D+ +DD+ +GWSG+Q VPR++WLD++GKQLVQWPVEEIE LR +V +KEL GS+
Sbjct: 331 EADAQEDDVARGWSGLQAVPRSVWLDRNGKQLVQWPVEEIEKLRENEVKFSNKELEGGSL 390
Query: 402 VEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILAT 461
EV GITASQ DV+I F+L LEEAE DP+W DPQ LC++ S +G++GPFGLL LA+
Sbjct: 391 FEVEGITASQADVKISFKLSNLEEAEELDPSWTDPQLLCSEMGVSSKGKYGPFGLLALAS 450
Query: 462 EDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
+DLTE+TAIFFR+F KYVVLMCSD RSS+ +++KTTYG FVDIDP H ++SLRSL
Sbjct: 451 DDLTEQTAIFFRVFSSHGKYVVLMCSDQRRSSISNNVEKTTYGTFVDIDPKHEEISLRSL 510
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSE 581
+DHSI+ESF A GK+CIT RVYP++A+ +AHL+ FN G++SV+IS LNAW+M A +
Sbjct: 511 IDHSIIESFGAEGKSCITARVYPRLAINKDAHLYTFNYGSESVMISELNAWSMKNAHMIV 570
Query: 582 EESF 585
+E+
Sbjct: 571 DETL 574
|
Source: Campanula rapunculoides Species: Campanula rapunculoides Genus: Campanula Family: Campanulaceae Order: Asterales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562173|ref|XP_003549346.1| PREDICTED: fructan 6-exohydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/547 (60%), Positives = 414/547 (75%), Gaps = 2/547 (0%)
Query: 41 LQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWA 100
+ S++ P QPY T YHF+PPQNW+NDPN PMYYKGVYH FYQ+NP P FG+KM+WA
Sbjct: 77 INSIKFKVPEKQPYRTWYHFQPPQNWMNDPNAPMYYKGVYHFFYQHNPYAPTFGEKMVWA 136
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGD--KPFILYTGIDASGQQVQNL 158
HSVSYDLINWIHL+HA+ PS YDINSCWSGS TILPG+ +P ILYTGID + QVQN+
Sbjct: 137 HSVSYDLINWIHLNHAIEPSDSYDINSCWSGSATILPGEEEQPVILYTGIDNNKYQVQNM 196
Query: 159 AMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218
AMP++LSDP L++WVK NP MTPP+GV+ + FRDP+TAWQ DG+WRV++G Q +EG
Sbjct: 197 AMPKDLSDPFLREWVKHPQNPAMTPPSGVEVNNFRDPSTAWQGKDGKWRVVIGAQNGDEG 256
Query: 219 MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKT 278
+Y S DF++W +P ++ TG+ ECPD FPVSIN T GVD SV + V+HVLK
Sbjct: 257 KTILYQSEDFVNWRVELNPFFATDNTGVCECPDFFPVSINSTNGVDASVQSQSVRHVLKI 316
Query: 279 SLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWA 338
S DYY LG Y F PD F G S+DLR DYGKFYASK+FFD AKNRR+LW
Sbjct: 317 SYLRRHQDYYFLGKYVYDEGNFVPDVKFTGTSSDLRLDYGKFYASKSFFDHAKNRRILWG 376
Query: 339 WANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGS 398
W NE D+ Q+DI+KGW+G+Q +PR +WLD+SGKQL+QWP+EEIE LR KQ+SI ++L
Sbjct: 377 WVNECDTRQNDIEKGWAGLQCIPRQVWLDESGKQLMQWPIEEIEKLRDKQISILGEKLVG 436
Query: 399 GSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLI 458
GSI+EVSGITASQ DVE+ FELPELE E D + VDP LC+++ A+ G GPFGLL
Sbjct: 437 GSIIEVSGITASQADVEVLFELPELENVEWLDESEVDPHLLCSEEYATRSGTIGPFGLLA 496
Query: 459 LATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSL 518
LA+ED TE TA+FFRI++ N+Y+ MCSD SRSSL++DLDKTTYG DIDP+ +SL
Sbjct: 497 LASEDQTEHTAVFFRIYRASNRYICFMCSDQSRSSLRQDLDKTTYGTIFDIDPNVKTISL 556
Query: 519 RSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQAR 578
RSL+D SI+ESF +G+ CIT+RVYP ++++ AHL+ FNNG+QSVVIS LNAW+M QA
Sbjct: 557 RSLIDRSIIESFGEKGRICITSRVYPSMSIDKNAHLYVFNNGSQSVVISELNAWSMKQAE 616
Query: 579 LSEEESF 585
+EES
Sbjct: 617 FGQEESI 623
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522748|ref|XP_004168388.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/531 (61%), Positives = 411/531 (77%), Gaps = 9/531 (1%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
TSYHF+P +NW+NDPNGPM+YKG+YH FYQ+NP G +F KM+WAHS+SYDLINW+HL+H
Sbjct: 46 TSYHFQPLKNWMNDPNGPMFYKGIYHFFYQHNPNGAVFNSKMVWAHSISYDLINWVHLNH 105
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
AL P+ P+DIN CWSGSV+ LP +KP ILYTGID+S QQVQNLA+P N SDP L+ W KF
Sbjct: 106 ALEPTDPFDINGCWSGSVSFLPENKPRILYTGIDSSSQQVQNLAIPANYSDPFLEKWRKF 165
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
S NP++ PP+G++ + FRDPTTAWQ PDG WRV +GGQ G A +Y S DF+ W +
Sbjct: 166 SQNPIIAPPDGLERNRFRDPTTAWQGPDGEWRVAIGGQTSYGGAAMLYRSEDFVRWHQFR 225
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVD-TSVLNPGVKHVLKTSLFSDKHDYYVLGTYD 294
PLYS Q++G WECPD +PV +NGT G+ +S GVK+V+K S S D+Y LG+Y
Sbjct: 226 FPLYSSQDSGTWECPDFYPVMLNGTNGIGFSSGFGVGVKYVMKASFNSS--DHYTLGSYV 283
Query: 295 PQMDIFS----PDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDI 350
P+ + F+ P DF G + LRYDYGKFYASKTF+DS++ RR+LW W NESDS QDDI
Sbjct: 284 PEKEKFTSDYGPGFDFKGINLGLRYDYGKFYASKTFYDSSQKRRILWGWVNESDSRQDDI 343
Query: 351 DKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITAS 410
+KGWSG+Q +PR IWL K+G+QL+QWPV+EI+ LR S+H KEL S +EV G +AS
Sbjct: 344 NKGWSGLQAIPRKIWLSKTGRQLIQWPVKEIKMLRRNHFSLHHKELRGRSTMEVLGGSAS 403
Query: 411 QVDVEIDFELPELEEAELFDPAW--VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKT 468
QVDVE+ FELP LEEAE D W +DPQ LC+ ++AS+ GR GPFGLL+LA+ DL+E T
Sbjct: 404 QVDVEVSFELPYLEEAESVDTRWGVLDPQVLCSKRDASVNGRVGPFGLLVLASNDLSEHT 463
Query: 469 AIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVE 528
AI+F I K N+YVVLMCSD SRSS ++++DKT +GAFVDIDP + K+SLR+LVDHSIVE
Sbjct: 464 AIYFHILKAHNRYVVLMCSDQSRSSFRKEVDKTAHGAFVDIDPRYKKISLRTLVDHSIVE 523
Query: 529 SFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARL 579
SF +GKTCIT+RVYP +AV N A L+AFNNGTQ+VVISSL AWNM+ A +
Sbjct: 524 SFGGKGKTCITSRVYPTLAVNNNARLYAFNNGTQTVVISSLKAWNMSNAEI 574
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475942|ref|XP_002279133.2| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/566 (57%), Positives = 431/566 (76%), Gaps = 13/566 (2%)
Query: 15 MVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPM 74
+V LC L++ + E + + + LQS PA+QPY T+YHF+PP+NW+NDPNGPM
Sbjct: 53 VVGLC--LMVGGHGIEGETSHHSYRNLQS----DPADQPYRTAYHFQPPKNWMNDPNGPM 106
Query: 75 YYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVT 134
YY GVYHLFYQYNP ++G+ + WAHS SYDL+NW+HL A+ P+ P+DIN CWSGS T
Sbjct: 107 YYNGVYHLFYQYNPYAAVWGN-ITWAHSTSYDLVNWVHLELAIKPTDPFDINGCWSGSAT 165
Query: 135 ILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRD 194
IL G++P I+YTG D+ +QVQNL++P+N+SDPLL++W+K NP+MTP +G+ FRD
Sbjct: 166 ILTGEEPVIIYTGKDSQNRQVQNLSVPKNISDPLLREWIKSPHNPLMTPIDGIDASNFRD 225
Query: 195 PTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFP 254
PTTAWQ D WR+LVG I+ G A +Y S DF++W K PL+S +TGMWECPD +P
Sbjct: 226 PTTAWQGSDKVWRILVGSLINGHGTALLYRSRDFVNWNKSQTPLHSSNKTGMWECPDFYP 285
Query: 255 VSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLR 314
VSI+ GV+TSV N +HVLK S + +DYY++G Y P+ D + +T F +DLR
Sbjct: 286 VSISSRNGVETSVQNAETRHVLKASF--NGNDYYIMGKYVPETDTYLVETGFLDAGSDLR 343
Query: 315 YDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLV 374
YDYGKFYASKTFFD+AK RR+LWAW E+D D +KGWSG+Q+ PR++ LD++G++LV
Sbjct: 344 YDYGKFYASKTFFDAAKKRRILWAWIQEADK---DTEKGWSGLQSFPRSVLLDQNGQRLV 400
Query: 375 QWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWV 434
QWPV+EI L QV+ H+KEL GS++EVSGITASQ DVE+ F+ P LEEAEL DP+W
Sbjct: 401 QWPVKEIAILHKNQVTFHNKELRGGSVIEVSGITASQADVEVSFDFPHLEEAELMDPSWT 460
Query: 435 DPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKG-QNKYVVLMCSDHSRSS 493
DPQ LC+ KN S++G GPFGLL+LA+ +LTE+TAIFFRIFK Q K++VLMCSD SRSS
Sbjct: 461 DPQALCSRKNVSVKGGIGPFGLLVLASNNLTEQTAIFFRIFKSTQEKHIVLMCSDQSRSS 520
Query: 494 LKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAH 553
L++D+DKT YGAFVDID +H ++SLRSL+DHSIVESF +GKTCIT RVYP++A+ EAH
Sbjct: 521 LRQDVDKTIYGAFVDIDLNHEQISLRSLIDHSIVESFGGKGKTCITARVYPELAINTEAH 580
Query: 554 LFAFNNGTQSVVISSLNAWNMNQARL 579
L+AFN+G Q++ IS+L+AW+M A +
Sbjct: 581 LYAFNSGNQTLNISTLSAWSMKNAEM 606
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | ||||||
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.948 | 0.953 | 0.564 | 1.9e-177 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.902 | 0.892 | 0.551 | 2.8e-169 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.916 | 0.978 | 0.530 | 4.3e-157 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.965 | 0.961 | 0.510 | 2.1e-155 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.957 | 0.950 | 0.502 | 1.1e-153 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.884 | 0.781 | 0.464 | 2.5e-129 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.884 | 0.800 | 0.461 | 4.8e-126 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.872 | 0.782 | 0.398 | 3.3e-102 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.551 | 0.649 | 0.317 | 2.3e-46 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.500 | 0.591 | 0.309 | 2.9e-41 |
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 322/570 (56%), Positives = 406/570 (71%)
Query: 22 LLIANGAHQSEACYGTNQKL-QSLQVSAPA-NQPYLTSYHFRPPQNWINDPNGPMYYKGV 79
LLI N EA + ++L QS +P+ NQPY T +HF+PP+NW+NDPNGPM YKG+
Sbjct: 17 LLIGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGI 76
Query: 80 YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139
YHLFYQ+NP G ++G+ ++WAHS S DLINW A+ PS P+DIN CWSGS TILP
Sbjct: 77 YHLFYQWNPKGAVWGN-IVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNG 135
Query: 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTT 197
KP ILYTGID QQVQN+A P+NLSDP L++W K NP+M P NG+ FRDPTT
Sbjct: 136 KPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTT 195
Query: 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257
AW D +WRV++G +I G+A Y S DF+ W K PL+ +GMWECPD FPV+
Sbjct: 196 AWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTR 255
Query: 258 NGTIGVDTSVL---NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLR 314
G+ GV+TS N +KHVLK SL KHDYY +GTYD D F PD F + R
Sbjct: 256 FGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPR 315
Query: 315 YDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLV 374
YDYGK+YASKTFFDSAKNRR+LW W NES S +DD++KGWSG+QT+PR IWLD+SGKQL+
Sbjct: 316 YDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLI 375
Query: 375 QWPVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXW 433
QWPV E+E LR KQV ++ +K L SGS +EV G+TA+Q DVE+ W
Sbjct: 376 QWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSW 435
Query: 434 VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQ---NKYVVLMCSDHS 490
DPQ +C+ N S++ GPFGL++LA+++L E T+++FRIFK + NKYVVLMCSD S
Sbjct: 436 TDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQS 495
Query: 491 RSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVEN 550
RSSLKED DKTTYGAFVDI+PH +SLR+L+DHS+VESF +G+ CIT+RVYPK+A+
Sbjct: 496 RSSLKEDNDKTTYGAFVDINPHQ-PLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGK 554
Query: 551 EAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
+HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 555 SSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1646 (584.5 bits), Expect = 2.8e-169, P = 2.8e-169
Identities = 298/540 (55%), Positives = 385/540 (71%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T YHF+P +NW+NDPNGPM YKG+YHLFYQYNP G ++ +++W HS S DL+NW
Sbjct: 35 NQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNW 94
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
I A PS P DIN CWSGSVTILP KP ILYTGID + QVQN+A+P N+SDP L+
Sbjct: 95 ISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLR 154
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWD 227
+W K NP+MT NG+ D FRDPTTAW DG WRV+VG D+ G+A +Y S D
Sbjct: 155 EWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRD 214
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNP-GVKHVLKTSLFSDKHD 286
F +WT+ PL+ TGMWECPD FPVSI G+ GV+TS + G+KHVLK SL HD
Sbjct: 215 FFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHD 274
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G+YD + D++ PD F N + R DYGK+YASKTF+D K RR+LW W NES
Sbjct: 275 YYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPA 334
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+DDI+KGWSG+Q+ PR IWLD+SGK+L+QWP+EEIETLRG+QV+ K L +GS ++V G
Sbjct: 335 KDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHG 394
Query: 407 ITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTE 466
+TA+Q DVE+ W DPQ++C+ + S+ GPFGL++LA+ D+ E
Sbjct: 395 VTAAQADVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEE 454
Query: 467 KTAIFFRIFKGQN------KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRS 520
T+++FRIFK + KYVVLMCSD SRSSL ++ DK+T+GAFV IDP H +SLR+
Sbjct: 455 YTSVYFRIFKSNDDTNKKTKYVVLMCSDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRT 514
Query: 521 LVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
L+DHSIVES+ G+TCIT+RVYPK+A+ A+LF FN GTQSV I +L+AW++ A+++
Sbjct: 515 LIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDILTLSAWSLKSAQIN 574
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1531 (544.0 bits), Expect = 4.3e-157, P = 4.3e-157
Identities = 292/550 (53%), Positives = 382/550 (69%)
Query: 42 QSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWA 100
Q+L +A N+ TS+HF+P +NW+NDPN PMYYKG YHLFYQ NPL P F ++IW
Sbjct: 7 QNLLQTAVLNR---TSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWG 63
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASG-QQVQNLA 159
HSVS D++NWI L AL PS +DINSCWSGS TILP +P ILYTG+D + QQV +A
Sbjct: 64 HSVSQDMVNWIQLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVA 123
Query: 160 MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG-QIDNE- 217
P+++SDPLL++WVK NPVM PP+ V + FRDPT AW+ DG+WRVL+G + D E
Sbjct: 124 EPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEK 183
Query: 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLK 277
GMA +Y S DF+ WTK PL + TGMWECPD FPVSI G GVDTSV N V+HVLK
Sbjct: 184 GMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLK 243
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLW 337
S F +D YV+G Y + + FS D +F S DLRYD+G FYASK FFDS KNRR+ W
Sbjct: 244 AS-FGG-NDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINW 301
Query: 338 AWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHD-KEL 396
W E+DS +DD KGW+G+ T+PR IW+D SGK+L+QWP+EEI LR K VS+ D E
Sbjct: 302 GWVIETDSKEDDFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEF 361
Query: 397 GSGSIVEVSGITASQVDVEIXXXXXXXXXX-XXXXXXWVDPQQLCNDKNASIQGRFGPFG 455
+GS E+SGITA+Q DVE+ VD L D+++S+ +GPFG
Sbjct: 362 KTGSTFEISGITAAQADVEVTFNLPFLENNPEILDADQVDDATLF-DRDSSVGCVYGPFG 420
Query: 456 LLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGK 515
LL LA+ DL+E+TAIFF++ + N Y V+MCS RSSL++++ K+++GAF+DIDP H K
Sbjct: 421 LLALASSDLSEQTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPRHEK 480
Query: 516 VSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMN 575
+SLR L+DHSI+ES+ GKT IT+RVYPK+A+ A L+ FN+G V+++SL AW+M
Sbjct: 481 ISLRCLIDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMR 540
Query: 576 QARLSEEESF 585
A+++ ++
Sbjct: 541 NAQINSNPTY 550
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1515 (538.4 bits), Expect = 2.1e-155, P = 2.1e-155
Identities = 297/582 (51%), Positives = 383/582 (65%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQP-YLTSYHFRPPQNWI 67
M++P +L +LI + +A + +KLQS S + P + T+YHF+PP++WI
Sbjct: 1 MSAPKFGYVLLLIVLINISNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRHWI 60
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127
NDPN PM YKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS +DIN
Sbjct: 61 NDPNAPMLYKGVYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPAIYPSKWFDING 119
Query: 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187
WSGS T +PG P ILYTGI + Q+QN A+P++LSDP LK W+K NP++ P NG
Sbjct: 120 TWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGE 179
Query: 188 KDDMFRDPTTAW-QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW DG WR+LVG + N G+A++Y S DF W K P++S ++TGM
Sbjct: 180 NGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGM 239
Query: 247 WECPDIFPVSINGTI-GVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ G+D S P KHVLK SL +++YY LGTYD + D + PD
Sbjct: 240 WECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGY 299
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
+ LR+DYG +YASKTFFD NRR+LW WANESD+ QDD KGW+G+Q +PR I
Sbjct: 300 TPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTIL 359
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXX 425
LD SGKQLV WP+EEIE+LRGK V + ++++ G EV GIT +QVDV++
Sbjct: 360 LDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLEK 419
Query: 426 XXXXXXXWVD-PQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFK--GQNKYV 482
+ P +LCN K +++ G GPFGL+ LAT DL E T +FFR+FK NK
Sbjct: 420 AEKFDESFATKPLELCNLKGSNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNKPK 479
Query: 483 VLMCSDHSRSSLKED--------LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARG 534
VLMCSD SSLK+D + K ++ FVD+ GK+SLRSL+DHS+VESF A+G
Sbjct: 480 VLMCSDAKPSSLKKDTGTDAKERMYKPSFAGFVDVGLLDGKISLRSLIDHSVVESFGAKG 539
Query: 535 KTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576
KT IT+RVYP AV +AHLF FNNG+Q V + SLNAWNM +
Sbjct: 540 KTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNAWNMQK 581
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 293/583 (50%), Positives = 386/583 (66%)
Query: 11 SPALMVLLCCFLLIANGAHQS----EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNW 66
S + VLL +LI N ++Q+ +A + ++LQS V + N + S+HF+PP++W
Sbjct: 4 SNVISVLLLLLVLI-NLSNQNIKGIDAFHQIYEELQSESVES-VNHLHRPSFHFQPPKHW 61
Query: 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDIN 126
INDPNGP+YYKG+YHLFYQYN G ++G+ +IWAHSVS DL+NW L AL PS +DI
Sbjct: 62 INDPNGPVYYKGLYHLFYQYNTKGAVWGN-IIWAHSVSKDLVNWEALEPALSPSKWFDIG 120
Query: 127 SCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNG 186
WSGS+TI+PG P ILYTG++ + Q+QN A+PE+ SDP L+ W+K NP+ P
Sbjct: 121 GTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT 180
Query: 187 VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
+ FRDPTTAW + DG WR +VG + G+A++Y S DF HW K HP++S Q TGM
Sbjct: 181 MNGSAFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGM 240
Query: 247 WECPDIFPVSING-TIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ G+D + P KHVLK SL +++YY LG YD + D + PD +
Sbjct: 241 WECPDFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGN 300
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
LR+DYG FYASKTFFD KNRR+LW WANESD+ +DDI KGW+G+Q +PR +
Sbjct: 301 TPDGWEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVL 360
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXX 425
LD S KQLV WPVEEIE+LRG V +++ ++ G +EV GIT +Q DVE+
Sbjct: 361 LDSSKKQLVFWPVEEIESLRGNYVRMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEK 420
Query: 426 XXXX--XXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQ--NKY 481
W P +LCN K ++++G GPFGL+ LAT DL E T +FFR+F +K
Sbjct: 421 AEIFDPSFTW-KPLELCNIKGSNVRGGVGPFGLITLATPDLEEYTPVFFRVFNDTKTHKP 479
Query: 482 VVLMCSDHSRSSLKED--------LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAAR 533
VLMCSD SSLK+D + K ++ FVD+D G++SLRSL+DHS+VESF A
Sbjct: 480 KVLMCSDARPSSLKQDTGLLAKDRMYKPSFAGFVDVDMADGRISLRSLIDHSVVESFGAL 539
Query: 534 GKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576
GKT IT+RVYP AV+ AHL+ FNNGTQ+V I SLNAWNM++
Sbjct: 540 GKTVITSRVYPVKAVKENAHLYVFNNGTQTVTIESLNAWNMDR 582
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 246/530 (46%), Positives = 337/530 (63%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P QNW+NDPNGP++YKG YH FYQYNP ++GD ++W H+VS DLI+W+HL
Sbjct: 122 TAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD-IVWGHAVSRDLIHWVHLPI 180
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ YD N W+GS T LP +LYTG QVQNLA PE+ +DPLL WVKF
Sbjct: 181 AMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKF 240
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
GNPV+ PP G+ FRDPTTAW+ +G+WR+ +G +++ G++ VY + DF + KLD
Sbjct: 241 PGNPVLVPPPGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLD 300
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L+ V TGMWEC D +PVS G+DTSV P VKH++K S+ + D+Y +GTY
Sbjct: 301 TLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFD 360
Query: 296 QMDIFSPD--TDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
+ PD T G + LRYDYGKFYASK+F+D K RRVLW+W ESDS D+ KG
Sbjct: 361 SNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKG 420
Query: 354 WSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQV 412
WS +Q +PR + LD K+GK LVQWPVEEI++LR D E+G GS+V V +A+Q+
Sbjct: 421 WSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQL 479
Query: 413 DVEIXXXXXXXXXXXXXXXXWV--DPQQLCNDKN--ASIQGRFGPFGLLILATEDLTEKT 468
D+E V + ++ +K+ ++++G GPFG +LATE L+E+T
Sbjct: 480 DIEAEFEINKESLDKIIGNASVVAEAEEFSCEKSGGSTVRGALGPFGFSVLATESLSEQT 539
Query: 469 AIFFRIFKGQNKYV-VLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIV 527
++F + KG++ + C+D SRSS+ D+ K YG+ V + K+++R LVDHSIV
Sbjct: 540 PVYFYVAKGKDSELKTFFCTDTSRSSVANDVVKPIYGSVVPVLKGE-KLTMRILVDHSIV 598
Query: 528 ESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
E+F G+TCIT+RVYP A+ A LF FNN + V +S W MN A
Sbjct: 599 EAFGQGGRTCITSRVYPTTAIYGAAKLFLFNNALDATVTASFTVWQMNSA 648
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 244/529 (46%), Positives = 328/529 (62%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P +NW+NDPNGP++YKG YH FYQYNP ++GD ++W H+VS DLI+W++L
Sbjct: 107 TAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD-IVWGHAVSKDLIHWLYLPI 165
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ P YD N W+GS T L +LYTG QVQNLA PE+ SDPLL WVKF
Sbjct: 166 AMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKF 225
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
SGNPV+ PP G+ FRDPTTAW+ G+WR+ +G +I+ G++ +Y + DF + K +
Sbjct: 226 SGNPVLVPPPGIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHE 285
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L+ V TGMWEC D +PVS G+DTSV P VKHV+K S+ + D+Y +GTYD
Sbjct: 286 TLLHQVPNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDD 345
Query: 296 QMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
+ PD G S LRYDYGK+YASKTF+D K RR+LW W ESDS D+ KG
Sbjct: 346 SNATWVPDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKG 405
Query: 354 WSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQV 412
WS VQ +PR + LD ++ K LVQWPVEEI++LR D +G G++V V +A+Q+
Sbjct: 406 WSSVQGIPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQL 464
Query: 413 DVEIXXXXXXXXXXXXXXXXWV--DPQQLCNDKNASI-QGRFGPFGLLILATEDLTEKTA 469
D+E V D + C S +G GPFG +LA E L+E+T
Sbjct: 465 DIEAEFEIKTDDLKLFFDDDSVEADNKFSCETNGGSTARGALGPFGFSVLADEGLSEQTP 524
Query: 470 IFFRIFKGQN-KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVE 528
++F + KG++ K + C+D SRS+L D+ K YG+FV + K+++R LVDHSIVE
Sbjct: 525 VYFYVTKGKHSKLNTVFCTDTSRSTLANDVVKPIYGSFVPVLKGE-KLTMRILVDHSIVE 583
Query: 529 SFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
FA G++CIT+RVYP A+ LF FNN + V +S W MN A
Sbjct: 584 GFAQGGRSCITSRVYPTKAIYGATKLFLFNNAIDATVTASFTVWQMNNA 632
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 212/532 (39%), Positives = 315/532 (59%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T +HF+P ++++NDPNGP+YY G YHLFYQYNP G +G+ + WAH+VS D++NW HL
Sbjct: 123 TGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGN-IAWAHAVSKDMVNWRHLPL 181
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ P YD N +GS+T+LP + +LYTG + QVQ LA P + SDPLL++W+K
Sbjct: 182 AMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREWIKH 241
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAW-QAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWT 232
NP++ PP G+ FRDP TAW D WR ++G + D+ G+ Y + DF+++
Sbjct: 242 PANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFVNYE 301
Query: 233 KLDHPLYSVQE-TGMWECPDIFPVSINGT--IGVDTSVLNPGVKHVLKTSLFSDKHDYYV 289
+ ++ + TGM+EC D++PV N + +G D S P V VLK S ++HDYY
Sbjct: 302 LMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSDDERHDYYA 358
Query: 290 LGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
LG +D +I++P LRYD+GK+YASK+F+D KNRR++WA+ E+DS Q D
Sbjct: 359 LGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETDSEQAD 418
Query: 350 IDKGWSGVQTVPRAIWLDKSGK-QLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGIT 408
I KGW+ + T+PR + LDK + L+QWPVEE++TLR + + +GS++ +
Sbjct: 419 ITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSVIRLPLHQ 478
Query: 409 ASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKT 468
+Q+D+E D C+ A+++G GPFGLL+LA TE+T
Sbjct: 479 GAQIDIEASFQLNSSDVDALTEA---DVSYNCSTSGAAVRGALGPFGLLVLAN-GRTEQT 534
Query: 469 AIFFRIFKGQNKYVVL-MCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKV-SLRSLVDHSI 526
A++F + KG + + C D SRS+ +D+ G+ V + G+ S+R LVDHSI
Sbjct: 535 AVYFYVSKGVDGALQTHFCHDESRSTQAKDVVNRMIGSIVPV--LDGETFSVRVLVDHSI 592
Query: 527 VESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISS-LNAWNMNQA 577
V+SFA G+ T+R YP A+ A ++ FNN T + V + L + M A
Sbjct: 593 VQSFAMGGRITATSRAYPTEAIYAAAGVYLFNNATGATVTAERLVVYEMASA 644
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 114/359 (31%), Positives = 185/359 (51%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y +YH PP W+NDPNG +Y++G YH+FYQ++P +G M W H+ S DL++W HL
Sbjct: 32 YRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGP-MHWGHAKSRDLVHWEHL 90
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTG---IDASGQQVQNLAMPENLSDPLLK 170
AL P YD + C+SGS ++ D +++YTG + A G + +++ + L+
Sbjct: 91 PIALAPGEAYDRDGCFSGSAVVMD-DVLYLIYTGHTWLGAPGDE-RSIRQVQCLASST-- 146
Query: 171 DWVKFSGN-PVM--TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227
D V FS + PV+ P G+ FRDP W+ + +W + +G + + +Y S D
Sbjct: 147 DGVAFSKHGPVIDRAPEPGIMH--FRDPKV-WRRGE-QWWMALGARQGDAPQLLLYRSGD 202
Query: 228 FIHWTKLDHPLYSVQETG--MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH 285
HWT L L +E+ MWECPD+F + G D + +P L S + + +
Sbjct: 203 LHHWTYLRCALQGQRESDGYMWECPDLFELD-----GCDVFLYSP---QGLNPSGYDNWN 254
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLR-YDYGK-FYASKTFFDSAKNRRVLWAWANES 343
+ +Y +M + D + +LR D+G FYA++T + RR+LWAW +
Sbjct: 255 KFQ--NSY--RMGLLD-DRGYFSEGGELRELDHGHDFYAAQTLL-APDGRRLLWAWMDMW 308
Query: 344 DSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIV 402
DS + W G ++PR L ++G++L P E+ LR Q ++ + SG+ +
Sbjct: 309 DSPMPSQAQHWCGALSLPRE--LSRNGERLRMRPARELAALRQSQRTLAIGVVESGNCI 365
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 378 (138.1 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 98/317 (30%), Positives = 149/317 (47%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y YH PP W+NDPNG +Y++G YH+FYQ++P +G M W H+ S DL++W HL
Sbjct: 27 YRPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDAKWGP-MYWGHAKSADLVHWQHL 85
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWV 173
AL P +D + C+SGS + GD ++YTG G+ L + + D +
Sbjct: 86 PIALAPGDDFDQDGCFSGSAVVC-GDTLALIYTGHTWLGEVGDELLIRQVQCLATSLDGI 144
Query: 174 KF--SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
F G + +PP FRDP WQ D W ++ G ++ + + +Y S D W
Sbjct: 145 NFVKHGAVIDSPPQDTIIH-FRDPKV-WQQDD-HWYLIAGARLGDRPLLPLYRSVDLHAW 201
Query: 232 TKLDHPLYSVQETG-MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
+ + + G MWECPD+F + G D + +P + H Y +
Sbjct: 202 EFVSYVSSGNEGDGYMWECPDLFRLD-----GRDVLLYSPQGMPAQGYERLNKFHTGYRV 256
Query: 291 GTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDD 349
G D Q F+G + D G FYA++T +A RR++WAW + +S
Sbjct: 257 GQIDSQRQ-------FNGGPF-IELDNGHDFYAAQTLV-AADGRRLVWAWLDMWESPTPT 307
Query: 350 IDKGWSGVQTVPRAIWL 366
W G+ +PR + L
Sbjct: 308 ATHLWRGMLGLPRELEL 324
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q43089 | INV1_PEA | 3, ., 2, ., 1, ., 2, 6 | 0.5335 | 0.9267 | 0.9801 | N/A | no |
| Q70AT7 | 1FEH_HORVU | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5073 | 0.9165 | 0.8981 | N/A | no |
| A2YZ01 | INV7_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5223 | 0.8994 | 0.8859 | N/A | no |
| Q2UXF7 | 6FEH_WHEAT | 3, ., 2, ., 1, ., 1, 5, 4 | 0.5221 | 0.8909 | 0.8745 | N/A | no |
| B6DZC8 | 1FEH3_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5054 | 0.9165 | 0.9026 | N/A | no |
| A2X5P7 | INV1_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5482 | 0.8756 | 0.8908 | N/A | no |
| Q84PN8 | 1FEH1_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5139 | 0.9011 | 0.8860 | N/A | no |
| Q84LA1 | 1FEH2_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5008 | 0.9352 | 0.9211 | N/A | no |
| P49174 | INVA_MAIZE | 3, ., 2, ., 1, ., 2, 6 | 0.5486 | 0.8807 | 0.8762 | N/A | no |
| B6DXP5 | 1FEH_LEYCH | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5027 | 0.9114 | 0.8916 | N/A | no |
| Q43866 | INV1_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.5721 | 0.9454 | 0.9503 | yes | no |
| P26792 | INV1_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5383 | 0.9591 | 0.9510 | N/A | no |
| B6DZD0 | 1FEH_TRIUA | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5139 | 0.9011 | 0.8860 | N/A | no |
| B6DZD1 | 1FEH_AEGSP | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5121 | 0.9011 | 0.8890 | N/A | no |
| D2IGW7 | 1FEH_BROPI | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5091 | 0.9165 | 0.8936 | N/A | no |
| Q0JDC6 | INV3_ORYSJ | 3, ., 2, ., 1, ., 2, 6 | 0.4974 | 0.9727 | 0.9744 | yes | no |
| Q01IS7 | INV2_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5212 | 0.8790 | 0.8628 | N/A | no |
| Q70XE6 | 6FEH_BETVU | 3, ., 2, ., 1, ., 1, 5, 4 | 0.5617 | 0.9028 | 0.8745 | N/A | no |
| Q39692 | INV2_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5017 | 0.9557 | 0.9476 | N/A | no |
| Q39693 | INV3_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5077 | 0.9574 | 0.9639 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.963 |
| 3rd Layer | 3.2.1.26 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 587 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-173 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-140 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 4e-92 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 2e-75 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 2e-51 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 6e-40 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 1e-18 | |
| pfam08244 | 83 | pfam08244, Glyco_hydro_32C, Glycosyl hydrolases fa | 2e-15 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 2e-15 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 498 bits (1283), Expect = e-173
Identities = 200/486 (41%), Positives = 271/486 (55%), Gaps = 59/486 (12%)
Query: 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC 118
HF+PP+ W+NDPNG +YYKG YHLFYQYNP G ++G+ + W H+VS DL++W HL AL
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGN-IHWGHAVSKDLVHWTHLPVALA 59
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGI--DASGQQVQNLAMPENLSDPLLKDWVKFS 176
P YD N +SGS I PG +LYTG + QVQ A SD L W K+
Sbjct: 60 PDEWYDSNGVFSGSAVIDPG-NLSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYD 118
Query: 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIHWTKLD 235
GNPV+TPP G + FRDP W D +W +++G D G+A +Y S D +WT L
Sbjct: 119 GNPVLTPPPGGGTEHFRDPKVFWYDGD-KWYMVIGASDEDKRGIALLYRSTDLKNWTLLS 177
Query: 236 HPLYSVQE--TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTY 293
L+S+ GMWECPD+FP+ G DTS KHVLK S +YY +G +
Sbjct: 178 EFLHSLLGDTGGMWECPDLFPLPGEG----DTS------KHVLKVSPQGGSGNYYFVGYF 227
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFDSAKNRRVLWAWANESDSTQDDI-D 351
D D F+PD LR DYG FYAS+TF+D NRR+L W DS DD+
Sbjct: 228 DGD-DTFTPDDPVDTGH-GLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPT 285
Query: 352 KGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQ 411
KGW+G ++PR + LD +G +L+QWPVEE+E+LR + + + L +GS+ E+ G+TAS
Sbjct: 286 KGWAGALSLPRELTLDLTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
Query: 412 --VDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTA 469
++E+ FE+ D + GPFGLL+ A++DL+E+TA
Sbjct: 345 DSYEIELSFEV---------------------DSGTA-----GPFGLLVRASKDLSEQTA 378
Query: 470 IFFRIFKGQNKYVVLMCSD-HSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVE 528
+++ + G +C D S ++ K GAFV +DP +SLR LVD S VE
Sbjct: 379 VYYDVSNGT------LCLDRRSSGGSFDEAFKGVRGAFVPLDPGE-TLSLRILVDRSSVE 431
Query: 529 SFAARG 534
FA G
Sbjct: 432 IFANGG 437
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-140
Identities = 146/329 (44%), Positives = 190/329 (57%), Gaps = 34/329 (10%)
Query: 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC 118
HF+PP+ W+NDPNG +YYKG YHLFYQYNP G ++G+ W H+VS DL++W HL AL
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGN-KHWGHAVSKDLVHWEHLPVALA 59
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGN 178
P YD N C+SGS +LP D +LYTG QVQ LA + + W K+ GN
Sbjct: 60 PDEWYDSNGCFSGSAVVLP-DNLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGN 114
Query: 179 PVMT--PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWTKLD 235
PV+ PP K FRDP AW PDG+W +++G Q +++ G A +Y S D +W L
Sbjct: 115 PVIINPPPGYTKH--FRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLG 172
Query: 236 HPLYSV-QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL---FSDKHDYYVLG 291
L+SV GMWECPD+FPV N VKHVLK S + DYY +G
Sbjct: 173 ELLHSVPDGGGMWECPDLFPVDGKD---------NGPVKHVLKFSPQGYQNGYQDYYFIG 223
Query: 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDI 350
T+D D F+P ++ R DYG FYAS+TF+D RR+L W E DS DD+
Sbjct: 224 TFDADGDTFTPP-------DEQRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDV 276
Query: 351 --DKGWSGVQTVPRAIWLDKSGKQLVQWP 377
KGW+G ++PR + L G +L+QWP
Sbjct: 277 PTTKGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 284 bits (730), Expect = 4e-92
Identities = 119/328 (36%), Positives = 161/328 (49%), Gaps = 42/328 (12%)
Query: 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD 124
W+NDPNG +Y+ G YHLFYQYNP GP++G+ W H+ S DL++W HL AL P PYD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMH-WGHATSKDLVHWEHLPVALAPDDPYD 59
Query: 125 INSCWSGSVTILPGDKPFILYTGI---DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181
C+SGS + K + YTG D +Q Q LA S + + K+ GNPV+
Sbjct: 60 SGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLA----YSTDDGRTFTKYEGNPVI 115
Query: 182 TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWTKLDHPLYS 240
PP+G FRDP W DG+W +++G ++ G +Y S D +W L L S
Sbjct: 116 PPPDGYTTH-FRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTS 172
Query: 241 VQETG-MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK------HDYYVLGTY 293
+ + G MWECPD+FP+ + G K VL S + Y++G +
Sbjct: 173 LGDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDF 219
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDK 352
D F DYG FYA +TF D RR+L W D +
Sbjct: 220 DGTTFTFDHTE-------FGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPED 271
Query: 353 GWSGVQTVPRAIWLDKSGKQLVQWPVEE 380
GW+G T+PR + L K G +L Q PV E
Sbjct: 272 GWAGCLTLPRELSL-KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 2e-75
Identities = 153/522 (29%), Positives = 222/522 (42%), Gaps = 81/522 (15%)
Query: 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN 109
A PY YHF PP W+NDPNG +Y+ G YHLFYQYNP G G W H+VS DL++
Sbjct: 24 AKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGP-KHWGHAVSKDLVH 82
Query: 110 WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG----IDASGQQVQNLAMPENLS 165
W HL AL P YD + C+SGS ++ + YTG + QQ Q +A E+
Sbjct: 83 WEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGG 141
Query: 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYW 224
+ K+SGNP++ P G FRDP W G+W +++G Q ++ G +Y
Sbjct: 142 -----TFEKYSGNPIIDQPEGYTPH-FRDPKVVWD-EGGKWWMMLGAQGEDLKGTILLYE 194
Query: 225 SWDFIHWTKLDHPLYSVQE--TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282
S D +W Q MWECPD+F + + L+
Sbjct: 195 SDDLKNWQFT-GEFGLEQGGLGYMWECPDLFELDGEDVLLFWPQGLSINGGEYDNIY--- 250
Query: 283 DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWAN 341
Y +G +D + G +L D+G FYA +TF D RR+L W
Sbjct: 251 --QSGYFVGDFDGKEFKLD-----DGQFREL--DFGFDFYAPQTFLD-PDGRRILIGWMG 300
Query: 342 ESDSTQD--DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSG 399
D T + ID+GW G T+PR + L +L Q PV E+E+LR + + H+ L
Sbjct: 301 NWDYTNNYPTIDEGWRGAMTLPRELTL--EDGKLYQTPVRELESLRKPEEAAHNTTLSGN 358
Query: 400 SIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLIL 459
S +E+ S E+D +L + + ++ R G
Sbjct: 359 SKLEL----PSGDAYELDLDLIWTDA-----------------TSFGLELRMGL------ 391
Query: 460 ATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLR 519
+ + +N+ + L D S S L D T F++ KV LR
Sbjct: 392 --------NLVGYD---VENETLTL---DRSDSPLFTVQDGETRECFIENG---AKVHLR 434
Query: 520 SLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGT 561
VD+S VE F G+ T+R++P + + G
Sbjct: 435 IFVDNSSVEIFINDGEKVFTSRIFP--TPDANGISLYSDQGV 474
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-51
Identities = 143/518 (27%), Positives = 214/518 (41%), Gaps = 109/518 (21%)
Query: 53 PYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIH 112
+ ++H +P +NDPNG +Y+KG YHLFYQ+ P GP+ G K W H S DL++W
Sbjct: 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKS-WGHYTSKDLVHWED 70
Query: 113 LSHALCPSGPYDINSCWSGS-VTILPGDKPFILYTG--IDASGQQ--VQNLA-MPENLSD 166
AL P PYD + C+SGS V + ++YTG D+ + Q LA M ++
Sbjct: 71 EGVALAPDDPYDSHGCYSGSAVDN--NGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH- 127
Query: 167 PLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWS 225
+ G V+ P FRDP W+ +G W +++G Q + E G +Y S
Sbjct: 128 ------FEKFGIVVIELPPAGYTAHFRDPKV-WKH-NGHWYMVIGAQTETEKGSILLYRS 179
Query: 226 WDFIHWTKLDHPLYSVQETG------MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279
D +WT + + + G MWECPD+F S++G + VL S
Sbjct: 180 KDLKNWTFV-GEILGDGQNGLDDRGYMWECPDLF--SLDG-------------QDVLLFS 223
Query: 280 ---LFSDKHDY-------YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFD 328
L + +DY Y++G D + F+ T+FH DYG FYA +TF
Sbjct: 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTEFH------ELDYGFDFYAPQTFLA 277
Query: 329 SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQ 388
RR+L AW + GW+ T+PR L +LVQ P+ E++ LR ++
Sbjct: 278 P-DGRRILVAWMGLPEIDYPTDRDGWAHCMTLPRE--LTLKDGKLVQTPLRELKALRTEE 334
Query: 389 VSIHDKELG-SGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASI 447
H G + + ++ +D E E L N
Sbjct: 335 ---HINVFGDQEHTLPG---LNGEFELILDLEKDSAFELGLAL---------TNK----- 374
Query: 448 QGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV 507
E+T + + K + D S ED T
Sbjct: 375 -----------------GEETLLTID--ADEGKVTL----DRRSSGNLEDYGGTRSCPL- 410
Query: 508 DIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPK 545
P+ KVSL +D S VE F G+ +T+R++P
Sbjct: 411 ---PNTKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 6e-40
Identities = 73/312 (23%), Positives = 105/312 (33%), Gaps = 40/312 (12%)
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPY 123
DPN + Y G Y++F+ + G AH+ S DL+NW AL GP
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKNGNPG----IAHATSKDLVNWTDHPVALVWWARRGGPK 55
Query: 124 DINSCWSGSVTILPGDKPFILYTGID-ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182
D W+ S+ + K ++ YT + QQ +A E+ + P G +
Sbjct: 56 DSGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGP---WTDYIGGPVLPD 112
Query: 183 PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVYWSWDFIHW--TKLDHPLY 239
P FRDP DG+W ++ G N G F+Y S D W + +
Sbjct: 113 NPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLIS 171
Query: 240 SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL------FSDKHDYYVLGTY 293
+ E P + NG K+ L S+ S Y
Sbjct: 172 EGEGGKQIEGPGLLK--KNG-------------KYYLFYSINGTGRVDSTYSIGYARSES 216
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
D + DT + Y + F D A R VL A D G
Sbjct: 217 DTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFND-AGGRVVLVYHAYNVQYA-DAPTYG 274
Query: 354 WSGVQTVPRAIW 365
W +PR +W
Sbjct: 275 WGRSLAIPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 74/300 (24%), Positives = 113/300 (37%), Gaps = 37/300 (12%)
Query: 73 PMYYKGVYHLFYQYNPLGPL-FGDKMIWAHSVSYDLINWIHLSHALCPSGPYDIN-SCWS 130
P Y G +H+FY ++P G + W+ + DL+N+ A+ G D + + +
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDD 190
GSV I YTG + G+ Q + M D L W K ++ G + +
Sbjct: 65 GSV-IKGEGTYHAFYTGHNLDGKPKQVV-MHATSDD--LITWTKDPEFILIADGEGYEKN 120
Query: 191 MFRDPTTAWQAPDGRWRVLVG-----GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETG 245
+RDP W +G + +L+ G + G ++ S D +W + P Y+
Sbjct: 121 DWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEY-EEPFYAPGLYF 179
Query: 246 MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
M ECPD+F + L S FS+ Y F P
Sbjct: 180 MPECPDLF--KMGD-------------WWYLVYSEFSEN----RKTHYRVSKSPFGPWRA 220
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
++ D R FYA+KT D RR L+ W DD + W G V I
Sbjct: 221 PDDDTFDGR----AFYAAKTASD--GTRRFLFGWVPTKAGNDDDGNWEWGGNLVVHELIQ 274
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|219762 pfam08244, Glyco_hydro_32C, Glycosyl hydrolases family 32 C terminal | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 2e-15
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 453 PFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPH 512
FGLL+ A+ D +E+T I + +K L+ D S S + K +G+ V P
Sbjct: 8 SFGLLLRASNDGSEQTLIGY------DKSKGLLTVDRSNSG--NGVFKEKFGSGVRAAPL 59
Query: 513 H--GKVSLRSLVDHSIVESFAARG 534
+SLR VD S VE FA G
Sbjct: 60 PEKDTLSLRIFVDRSSVEVFANDG 83
|
This domain corresponds to the C terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module. Length = 83 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 2e-15
Identities = 74/283 (26%), Positives = 96/283 (33%), Gaps = 41/283 (14%)
Query: 77 KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSVT 134
G YHLFY P G G+ + S D W L P G +D W+ SV
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 135 ILPGDKPFILYTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSGNPVM----TPPNGVK 188
P + YTG D Q LA ++ L W K NPV + G
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 189 DDM-FRDPTTAWQAPDGRWRVLVGGQIDNEGMA-FVYWSWDFIHWTKLDHPLYSVQET-- 244
DD +RDP G WR+ G + +E A + S D IHWT + P
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 245 GMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQMDIFSPD 303
G E P V I+G + L S + D Y +GT +F P
Sbjct: 188 GQLEVP--QVVKIDG-------------RWYLLYSGRNEDAKTGYRVGT-----ALFGPG 227
Query: 304 TDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
D YA++ D VL + DS
Sbjct: 228 RPLTLAELL---DRTDLYAARPVPDGEGGGVVLEGFVQFGDSG 267
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.94 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.9 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.83 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.83 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.81 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.76 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.73 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.68 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.62 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.59 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.59 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.56 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.51 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.44 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.39 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.39 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.39 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.38 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.3 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 99.28 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.27 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.24 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.18 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.15 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.11 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 99.1 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.05 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 99.03 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 99.02 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.87 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.84 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.82 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.73 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.67 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.62 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.56 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.55 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.53 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.53 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.48 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.45 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.37 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.33 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.25 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.24 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.24 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.18 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.15 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 97.96 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.93 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.92 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.82 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.73 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.66 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.63 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.59 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 97.56 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.56 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.53 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.51 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.28 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.25 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.2 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 96.95 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.68 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.6 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.58 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.23 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.48 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 92.36 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 92.22 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 89.91 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 87.24 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 85.06 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 80.74 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 80.24 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-114 Score=899.99 Aligned_cols=542 Identities=58% Similarity=0.992 Sum_probs=500.8
Q ss_pred ccccccCcccccccccCCCCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCccc
Q 007857 31 SEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110 (587)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W 110 (587)
.++...+.+++.+.+.++..+.++||.|||+||+|||||| +|++|.|||||||||.+.+|| +.+||||+|+||+||
T Consensus 26 ~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGHavSkDLinW 101 (571)
T KOG0228|consen 26 LDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGHAVSKDLINW 101 (571)
T ss_pred hhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeeeecchhhccc
Confidence 3333344445544334477889999999999999999999 899999999999999999999 999999999999999
Q ss_pred EeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCC
Q 007857 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVK 188 (587)
Q Consensus 111 ~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p--~~~~ 188 (587)
+.+|+||.|+.++|..|||||||+++++|+++++|||.+...+|.|.+|+..|.+||.+++|.|.++||++.++ .+++
T Consensus 102 ~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in 181 (571)
T KOG0228|consen 102 EALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGIN 181 (571)
T ss_pred cccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCC
Confidence 99999999999999999999999999999999999999887899999999999999999999999999999877 6778
Q ss_pred CCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccC
Q 007857 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL 268 (587)
Q Consensus 189 ~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~ 268 (587)
...||||+++|.+++|+|+|++|+..+.+|.+.+|+|+|+++|+..+.|+++...++||||||||++..+|++|++.+..
T Consensus 182 ~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~ 261 (571)
T KOG0228|consen 182 SSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLF 261 (571)
T ss_pred hhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEe
Confidence 89999999999999999999999988788999999999999999999999988889999999999999999999998887
Q ss_pred CCCceeEEEEeeCCCCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCCCcccceEecCCCCcEEEEEeccCCCCCCC
Q 007857 269 NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348 (587)
Q Consensus 269 ~~~~k~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~grri~~gW~~~~~~~~~ 348 (587)
+...|||+..|+.+++..+|+||+||+++.+|.|+..+.+.....+.|||.|||.|||.|..++|||+|||+++|++..+
T Consensus 262 ~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~d 341 (571)
T KOG0228|consen 262 GSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTND 341 (571)
T ss_pred ccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCccccc
Confidence 77679999999988899999999999988899999877665455678999999999999988999999999999999998
Q ss_pred CCCCCcceeeeeeEEEEEec-CCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCcccccc
Q 007857 349 DIDKGWSGVQTVPRAIWLDK-SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAE 427 (587)
Q Consensus 349 ~~~~gW~g~ltlPReL~l~~-dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 427 (587)
..+.||+|.|||||+++|+. .|+.|.|.|+.|++.||.+.+...+.....+..++..++++.+.++|++|++..++.+.
T Consensus 342 d~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~ 421 (571)
T KOG0228|consen 342 DPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAI 421 (571)
T ss_pred chhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEeccccccc
Confidence 99999999999999999997 68899999999999999998887777778888899999999999999999999888899
Q ss_pred ccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEE
Q 007857 428 LFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV 507 (587)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~ 507 (587)
.++++|.+++.+|...+.++.++.++||+..+++.|++|+|.++|.+.+......+.+|.|.++|++..+.+++.+++++
T Consensus 422 ~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afv 501 (571)
T KOG0228|consen 422 VIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFV 501 (571)
T ss_pred ccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEE
Confidence 99999988999999999999999999999999999999999999999987667788999999999999988999999999
Q ss_pred EecCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeecccc
Q 007857 508 DIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577 (587)
Q Consensus 508 ~~~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~ 577 (587)
++.+ .++++||++||+|+||.|+|+|++|+|+|+||..+......+++|++|...+.|.++.+|+|+.+
T Consensus 502 dv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 502 DVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred EecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 8877 79999999999999999999999999999999998777889999998888889999999999976
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-100 Score=821.06 Aligned_cols=450 Identities=33% Similarity=0.605 Sum_probs=356.2
Q ss_pred CCCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCC
Q 007857 48 APANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127 (587)
Q Consensus 48 ~~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G 127 (587)
....++|||.|||+||.||||||||++|++|+|||||||||+++.|| +||||||+|+|||||+++|+||.|++++|.+|
T Consensus 22 ~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g 100 (486)
T COG1621 22 SVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHG 100 (486)
T ss_pred hccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCC
Confidence 44558999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEeeeEEEccCCeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC
Q 007857 128 CWSGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~ 203 (587)
|||||||++ +|+..+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+|+ ++
T Consensus 101 ~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~ 172 (486)
T COG1621 101 CYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EG 172 (486)
T ss_pred ceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CC
Confidence 999999985 9999999999864 37889999999996 589998789999888876 899999999998 68
Q ss_pred CeEEEEEeeee-CCcceEEEEEeCCCCCCEEccccCcc-CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 204 GRWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 204 g~~~m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~-~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+|||++|++. +..|+|+||+|+||++|++.|++..+ +..++||||||||+|+ +.+.+. +|++..+.+
T Consensus 173 ~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~~--------~~pqg~~~~ 242 (486)
T COG1621 173 GKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVLL--------FWPQGLSIN 242 (486)
T ss_pred CcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCceE--------EcceeeecC
Confidence 89999999987 56899999999999999999987665 4456799999999999 434443 566666653
Q ss_pred C-----CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCC--CCCCCCC
Q 007857 282 S-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKG 353 (587)
Q Consensus 282 ~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~--~~~~~~g 353 (587)
+ ...++|++|+||++ +|++... .+++||+|+ |||||||.++ +||||++|||++|++. .|+...+
T Consensus 243 ~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~ 314 (486)
T COG1621 243 GGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEG 314 (486)
T ss_pred CCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccC
Confidence 2 45689999999997 6666542 367999999 9999999985 8999999999999997 5666679
Q ss_pred cceeeeeeEEEEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCc
Q 007857 354 WSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAW 433 (587)
Q Consensus 354 W~g~ltlPReL~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~ 433 (587)
|+|||||||||+|+ +| +|+|+|++||++||+.+....+..+.+. ..+....+.++++++.+...
T Consensus 315 w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~------------ 378 (486)
T COG1621 315 WRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT------------ 378 (486)
T ss_pred cCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc------------
Confidence 99999999999996 56 6999999999999999666666555544 22323334445544333211
Q ss_pred CCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEEecCCC
Q 007857 434 VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHH 513 (587)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~ 513 (587)
....+|+.++.+.. .+.++.. ++. +++||++|. ......+..+.+.+..
T Consensus 379 ----------------~~~~~~~~l~~~~~-----~~~~~~~---~~~---l~ldR~~s~----~f~~~~~~~r~~~~~~ 427 (486)
T COG1621 379 ----------------DATSFGLELRMGLN-----LVGYDVE---NET---LTLDRSDSP----LFTVQDGETRECFIEN 427 (486)
T ss_pred ----------------ccceEEEEeecCcc-----eeccccc---cce---EEEeccccc----cccccCCceeeeccCC
Confidence 11257888876543 4455432 233 456888871 1112223334444433
Q ss_pred -CeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccc
Q 007857 514 -GKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576 (587)
Q Consensus 514 -~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~ 576 (587)
.+++||||||+|+||||+|||+.|||+|+||... ..++.+.+.. +.+.+. .++|.+++
T Consensus 428 ~~~v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~-g~~~~~-~~~~~l~~ 486 (486)
T COG1621 428 GAKVHLRIFVDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQ-GVAVVQ-NTIWPLKS 486 (486)
T ss_pred CceEEEEEEEeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccC-ceEEEE-eeeeccCC
Confidence 4489999999999999999999999999999886 3445444443 233333 37898874
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-91 Score=761.55 Aligned_cols=415 Identities=32% Similarity=0.577 Sum_probs=330.1
Q ss_pred CCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeE
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~ 129 (587)
.+++|||+|||+|+.||||||||++|++|+|||||||+|+++.|| +||||||+|+|||||+++|+||.|++++|+.|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
||||++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|+. +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999998 59999999999753 25688999999986 6899974 59997654444678999996 55 3689
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCCEEccccCccC-----CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEe
Q 007857 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (587)
Q Consensus 206 ~~m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~~-----~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s 279 (587)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.||||||||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 456899999999999999998654332 235699999999998 5 7888887
Q ss_pred eCCC----------CeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCC
Q 007857 280 LFSD----------KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (587)
Q Consensus 280 ~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~ 348 (587)
.++. ..++|++|+||..+.+|++++. .+.+|+|+ |||||||.++ +|||||||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 6431 2468999999987779988643 46899999 9999999985 799999999999987767
Q ss_pred CCCCCcceeeeeeEEEEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccc
Q 007857 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAEL 428 (587)
Q Consensus 349 ~~~~gW~g~ltlPReL~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 428 (587)
+.+.+|+|+|||||+|+|+ +| +|+|+|++||++||.+... ... ......+.+.. .+++|+++++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~~-~~~~l~~~~~~~------- 362 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGLN-GEFELILDLEKD------- 362 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCCC-ceEEEEEEecCC-------
Confidence 7778999999999999997 67 6999999999999986542 011 11111222222 244444443211
Q ss_pred cCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEE
Q 007857 429 FDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVD 508 (587)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~ 508 (587)
....+||.+ .+ ..+.+.|.|+..+ +.+ .+||++++.... +...+.
T Consensus 363 ---------------------~~~~~~l~~-~~--~~~~~~i~~~~~~---~~l---~~dr~~~~~~~~-----~~~~~~ 407 (445)
T TIGR01322 363 ---------------------SAFELGLAL-TN--KGEETLLTIDADE---GKV---TLDRRSSGNLED-----YGGTRS 407 (445)
T ss_pred ---------------------CccEEEEEE-eC--CCCeEEEEEECcC---CEE---EEEccCCCCcCC-----ccceEE
Confidence 113588888 44 3467999998643 444 458988863211 111222
Q ss_pred ecC-CCCeEEEEEEEeCceEEEEcCCCceEEEEEeecC
Q 007857 509 IDP-HHGKVSLRSLVDHSIVESFAARGKTCITTRVYPK 545 (587)
Q Consensus 509 ~~~-~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~ 545 (587)
+.+ .++.++||||||+|+||||||||+.|||+||||.
T Consensus 408 ~~~~~~~~~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 408 CPLPNTKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEcCCCCeEEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 222 3478999999999999999999999999999994
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-87 Score=727.59 Aligned_cols=421 Identities=45% Similarity=0.837 Sum_probs=322.8
Q ss_pred eecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
||+|+.||||||||++|++|+|||||||+|+++.|| +++||||+|+|||||+++|+||.|+.++|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-P 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999985 7
Q ss_pred CeEEEEEeeecCC------CceeE-EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
|++++||||+... ..+.| +.|.++|+ ++|+|+++||||.++++....+||||+|+|+ ++|+|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 8899999997421 12333 44545554 8999998899997666666789999998777 3479999999
Q ss_pred eee-CCcceEEEEEeCCCCCCEEccccCcc--CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeE
Q 007857 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (587)
Q Consensus 212 ~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~--~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (587)
++. +..|+++||+|+||++|++.+.++.. ...++||||||||+|+.+| .+.||||++|.++...++|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999999876543 2345899999999998544 2359999999987678899
Q ss_pred EEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCC-CCCCCCCCcceeeeeeEEEEE
Q 007857 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS-TQDDIDKGWSGVQTVPRAIWL 366 (587)
Q Consensus 289 ~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~-~~~~~~~gW~g~ltlPReL~l 366 (587)
++|+++++ .+|+|+.... ....+++|+|+ |||||||.+++++||||||||++|+. ....++.+|+|+|||||||+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999973 4798875421 12245899998 99999999864569999999999984 333344899999999999999
Q ss_pred e-cCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecC--cccceeeEEEEEEcCccccccccCCCcCCcccccccc
Q 007857 367 D-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG--ITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDK 443 (587)
Q Consensus 367 ~-~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (587)
+ ++| +|.|+|++||++||... ......+..+....+.. ..+.+++|+++++...
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~--------------------- 357 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS--------------------- 357 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC---------------------
Confidence 5 566 79999999999999542 22222332222222211 2344566766665420
Q ss_pred cccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCC-CCcccceeEEEecCCCCeEEEEEEE
Q 007857 444 NASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED-LDKTTYGAFVDIDPHHGKVSLRSLV 522 (587)
Q Consensus 444 ~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~-~~~~~~~~~~~~~~~~~~~~Lrifv 522 (587)
.....+||.+++++|+++.+.|.|+..+ +. +.+||++++.... ...........+. .+++++|||||
T Consensus 358 -----~~~~~~~l~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lri~v 425 (437)
T smart00640 358 -----GGAGPFGLLVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTSNDEVFKGVRGATVPVD-PGETLSLRILV 425 (437)
T ss_pred -----CcceeEEEEEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCCcccccccceeeeeecC-CCCeEEEEEEE
Confidence 0113689999999888899999998643 43 3458876653110 0011111111221 24689999999
Q ss_pred eCceEEEEcCCC
Q 007857 523 DHSIVESFAARG 534 (587)
Q Consensus 523 D~S~vEvFvNdG 534 (587)
|+||||||||||
T Consensus 426 D~ssvEvf~ndG 437 (437)
T smart00640 426 DHSSVEIFANGG 437 (437)
T ss_pred eceEEEEEeCCC
Confidence 999999999987
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=618.10 Aligned_cols=299 Identities=43% Similarity=0.856 Sum_probs=248.9
Q ss_pred eecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
||+|+.||||||||++|++|+|||||||||+++.|| +++||||+|+|||||+++|+||.|+.++|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-D 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-T
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999995 6
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeec-CCcEEcC-CCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~-~nPvi~~-p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+++++||||+.....+.|++|+|+|.+ ++|+|++ +||||.. |.+ ...+||||+|+|++ +++|+|++|++...
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 799999999987668999999996654 8999998 4999975 444 68999999988985 69999999999888
Q ss_pred cceEEEEEeCCCCCCEEccccCccCC-CCCccccCeEEEeccCCccceeeccCCCCceeEEEEee----CCCCeeeEEEE
Q 007857 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (587)
Q Consensus 217 ~G~~~ly~S~Dl~~W~~~~~~~~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG 291 (587)
.|++++|+|+||++|++.+.+..... .++||||||||+|+..|. + ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987665433 478999999999995421 0 012367999998 34578999999
Q ss_pred eecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCC-CCCCCCCcceeeeeeEEEEEecC
Q 007857 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST-QDDIDKGWSGVQTVPRAIWLDKS 369 (587)
Q Consensus 292 ~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~~d 369 (587)
+||..+.+|+++.. ..+++|+|+ |||+|+|.++.++||||||||++++.. ....+.+|+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99776679987621 367999999 999999999754599999999999875 23336899999999999999754
Q ss_pred CCeEEEcc
Q 007857 370 GKQLVQWP 377 (587)
Q Consensus 370 g~~L~q~P 377 (587)
+++|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 45799998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-68 Score=550.90 Aligned_cols=286 Identities=40% Similarity=0.788 Sum_probs=246.9
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 899999999999999999999999999999 9999999999999999999999998888999999999998644999999
Q ss_pred EeeecC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcceE
Q 007857 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (587)
Q Consensus 145 YTg~~~---~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G~~ 220 (587)
|||+.. .+.+.|++|+|+|.+ ++|+|...+|++.+ +.....+||||+|+|. +|+|||++|++. +..|++
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999864 467999999998533 89999988998863 3345689999997665 499999999976 356889
Q ss_pred EEEEeCCCCCCEEccccC-ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCC------CeeeEEEEee
Q 007857 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD------KHDYYVLGTY 293 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~~-~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~ 293 (587)
.+|+|+||++|++.+.+. .....+.|||||+||+|+++| ||||++|.+.. ..+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~~-------------k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCCC-------------eEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999987542 233456799999999998422 99999998643 4579999999
Q ss_pred cCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecCCCe
Q 007857 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372 (587)
Q Consensus 294 d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~dg~~ 372 (587)
++. .|+++.. ..+.+|+|+ |||||+|.++ ++||||||||++++...+..+.+|+|+|||||+|+|++++ +
T Consensus 220 ~~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~ 290 (298)
T cd08996 220 DGT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-R 290 (298)
T ss_pred ECC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-E
Confidence 986 5665421 257899998 9999999986 7999999999999988788899999999999999998755 7
Q ss_pred EEEcchHH
Q 007857 373 LVQWPVEE 380 (587)
Q Consensus 373 L~q~Pv~e 380 (587)
|.|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999975
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-56 Score=456.32 Aligned_cols=267 Identities=25% Similarity=0.446 Sum_probs=223.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCcccEeccCCCCC-CCccCCCCeEeeeEEEccCCeEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCP-SGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~--g~~~~Wgha~S~Dlv~W~~~~~al~P-~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.||. ++|++|+||||||++|.++.| + +++||||+|+||+||+++++||.| +..++..|||||||++ .+|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEE
Confidence 4887 999999999999999999988 8 999999999999999999999988 4567789999999998 48999999
Q ss_pred EeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCc
Q 007857 145 YTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (587)
Q Consensus 145 YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~ 217 (587)
|||+.. ...+.|++|+|+|+ ++|+|...+||+.++.++...+||||+|+|.+.+|+|||+++++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 999864 25678999999986 799998778999755555567899999776644799999999875 456
Q ss_pred ceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC-CCeeeEEEEeecCC
Q 007857 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (587)
Q Consensus 218 G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~ 296 (587)
|++.+|+|+||++|++.+. +.....+.|||||++|+++ | +|||++|.+. .....|++|+..
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8899999999999999874 4434446799999999998 6 8999999753 356789999622
Q ss_pred CCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecCCC
Q 007857 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGK 371 (587)
Q Consensus 297 ~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~dg~ 371 (587)
.+.|.... ...+| |+ |||||||.++ |||||||||++++...++.+.+|+|+|| ||||.+.+||.
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 13554322 23589 99 9999999985 9999999999999887888899999998 68888877773
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=328.68 Aligned_cols=244 Identities=28% Similarity=0.382 Sum_probs=194.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
-||+++. |+||||||++|.++.|+...+|+||+|+||+||++.+.+| .|...+|..||++|+++...+|+++|||
T Consensus 7 ~~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 7 FNPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred cCCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 3566444 8999999999998776525668999999999999999888 5667788899999999986449999999
Q ss_pred eeecC--CCceeEEEEEecCCCCCccceeeeecCCcEE-----cCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCc
Q 007857 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNE 217 (587)
Q Consensus 146 Tg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-----~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~ 217 (587)
|+... ...+.|++|+|+|+ ++|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99863 46788999999996 799998767753 222334457899999776633499999999875 346
Q ss_pred ceEEEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC-CCeeeEEEEeec
Q 007857 218 GMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYD 294 (587)
Q Consensus 218 G~~~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d 294 (587)
+++.+|+|+|+++|++.+.+ ........+||||++|+++ | +|+|+++... ...+.|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 78999999999999998754 2222345799999999998 6 8999998764 456889999987
Q ss_pred CCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCC
Q 007857 295 PQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (587)
Q Consensus 295 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~ 343 (587)
.. .|.|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 64 555542 34689999 999999987546999999999987
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=307.58 Aligned_cols=269 Identities=28% Similarity=0.440 Sum_probs=206.9
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEccCCeEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
|||+ +++++|+||||||++|.+ + .++|+|++|+||+||++++.+|. |..+++..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 999999999999999875 5 78999999999999999998884 6677778899999999864499999
Q ss_pred EEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcceE
Q 007857 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (587)
Q Consensus 144 ~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~-p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G~~ 220 (587)
+||+... ...+.+++|+|+|+. ..|++...+||+.. +.......+|||+|++. ++|+|||++++.. ...+.+
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeE
Confidence 9999753 356889999999874 35666555666642 33334578999996544 5699999998764 235678
Q ss_pred EEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC------CCeeeEEEEe
Q 007857 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~ 292 (587)
.+++|+|+.+|+..+.+ ........++|||++|+++ | +|+|++|... .....|.+++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999887643 1223346799999999998 6 8999998754 3456777776
Q ss_pred ecCCCCeeccCCCCC-CCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEE
Q 007857 293 YDPQMDIFSPDTDFH-GNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365 (587)
Q Consensus 293 ~d~~~~~F~~~~~~~-~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~ 365 (587)
.+. +.|.+..... ........|.+. +||++.|.++ +||++|++|+.+++.... ...+|.++|+|||+|.
T Consensus 216 ~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SDT--GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCC--CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 543 4665543210 000123467777 9999999986 799999999999876444 5689999999999873
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=233.89 Aligned_cols=195 Identities=22% Similarity=0.227 Sum_probs=137.3
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 68 nDPnG~~~-~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
-|..|-+. ++|..-+|+..-|.. +.|+ .+||||++|+||+||++.+ +|.|+..+|..|||||||++..||+++
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~ 85 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQ 85 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEE
Confidence 46666444 688533888766543 5788 9999999999999999955 477889999999999999986679999
Q ss_pred EEEeeecC----CCceeEEEEEecCCCC-CccceeeeecCCcEEcCC--------------CCCCCCCccCCeEEeecCC
Q 007857 143 ILYTGIDA----SGQQVQNLAMPENLSD-PLLKDWVKFSGNPVMTPP--------------NGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 143 l~YTg~~~----~~~~~q~~A~s~D~~d-~~l~~w~k~~~nPvi~~p--------------~~~~~~~fRDP~V~w~~~~ 203 (587)
|||||+.+ .+...|++|.+.+... --++.|.+ ..+++.++ +.....+||||+|+..+++
T Consensus 86 lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~--~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 86 LFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED--HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEEeccccCCCCCCCceEEEEEEECCCcceEecccCc--cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 99999853 2457788887654310 00122322 23444321 1123578999996554347
Q ss_pred CeEEEEEeeeeC-C---------------------------cceEEEE--EeCCCCCCEEccccCccCCCCCccccCeEE
Q 007857 204 GRWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQETGMWECPDIF 253 (587)
Q Consensus 204 g~~~m~~g~~~~-~---------------------------~G~~~ly--~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf 253 (587)
|+|||+++++.. . .|+|.+. +|+||.+|++.++++.+..-...||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999988652 2 2555555 678999999997544322223479999999
Q ss_pred EeccCCccceeeccCCCCceeEEEEeeC
Q 007857 254 PVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 254 ~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+++ | ||+|++|..
T Consensus 244 ~~~--g-------------k~yL~~s~~ 256 (349)
T cd08997 244 FHN--G-------------KYYLFTISH 256 (349)
T ss_pred EEC--C-------------EEEEEEeCC
Confidence 998 6 999998853
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=209.59 Aligned_cols=190 Identities=20% Similarity=0.303 Sum_probs=140.7
Q ss_pred eeecCCCCCccCCCcceEEC-CEEEEEEEECCCCCC---CCCCceEEEEEeCCCc-ccEeccCCCCCC--CccCCCCeEe
Q 007857 58 YHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (587)
Q Consensus 58 yH~~p~~gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~---~g~~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~d~~Gv~S 130 (587)
.+|..+..++-+|. +++.+ |+||||||..|.+.. |-....||||+|+|+. +|+..+++|.|+ ..||+.++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888889998 77754 799999999887643 2113569999999987 899999999887 5688899999
Q ss_pred eeEEEccCCeEEEEEeeecC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CC-----------------
Q 007857 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PN----------------- 185 (587)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~-p~----------------- 185 (587)
++++. .+|+++||||+... ...+.+++|+|++.. ..|++. .+||+.+ +.
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99988 48999999998753 134567778776631 256553 3444421 00
Q ss_pred -------------------------------------------CCCCCCccCCeEEeecCCCeEEEEEeeeeC----Ccc
Q 007857 186 -------------------------------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (587)
Q Consensus 186 -------------------------------------------~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~----~~G 218 (587)
.....++|||+ ||+ .+|+|||+++++.. ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 01234679999 566 46999999998752 467
Q ss_pred eEEEEEeCCCCCCEEccccCc------cC---CCCCccccCeEE-Eec
Q 007857 219 MAFVYWSWDFIHWTKLDHPLY------SV---QETGMWECPDIF-PVS 256 (587)
Q Consensus 219 ~~~ly~S~Dl~~W~~~~~~~~------~~---~~~~~wECPdlf-~l~ 256 (587)
++.+|+|+|+.+|++.+.+.. .. ...+|||||++| +.+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999876532 11 135799999999 777
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=185.11 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=124.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCC--CCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
.+|. +++++|+||||||++|..+ .++ .++|+||+|+||++|++.++++.+ ..++++++++.+.+|+++|+|
T Consensus 80 WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 80 WAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEE
Confidence 4687 8999999999999998753 334 789999999999999998876322 357899999986669999999
Q ss_pred eeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe
Q 007857 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (587)
Q Consensus 146 Tg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S 225 (587)
|+.. ..+.+++|.|+|+ .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S 211 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRS 211 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEEC
Confidence 9753 3456689999886 799984 466642 23479995 45 47999999854 234 679999
Q ss_pred CCCCCCEEccccCccC----CCCCccccCeEEEec
Q 007857 226 WDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (587)
Q Consensus 226 ~Dl~~W~~~~~~~~~~----~~~~~wECPdlf~l~ 256 (587)
+|+.+|++.+.++... ....+++||++|+.+
T Consensus 212 ~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 212 KDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999998766432 124478999999876
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=183.98 Aligned_cols=191 Identities=19% Similarity=0.237 Sum_probs=140.4
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCC-CccCCCCeEeeeEEEccCCeEE
Q 007857 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~-~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
.||.+||+ +++++|+||||++..+.+. . ..+|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--E-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--C-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 46899999 6889999999998765432 2 4689999999999999999988764 456677899999987 589999
Q ss_pred EEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEE
Q 007857 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~l 222 (587)
|+||+. +.+++|+|+|.. -.|++..++|++.... .....+||.|+ .+++|+|||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEEE
Confidence 999986 457899998863 3677744678875432 23678999965 44689999999874 22233
Q ss_pred E-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEE
Q 007857 223 Y-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (587)
Q Consensus 223 y-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (587)
. -|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3 478898886543222 12234589999999987 6 8899998754332345554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-19 Score=180.05 Aligned_cols=147 Identities=15% Similarity=0.242 Sum_probs=115.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCC--CCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
|| |+++++|+||||||.++.. + .++||||+|+|++||++.+ +.|.| +..++..||++++++. .+|+++|+|
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 67 5899999999999987643 4 7899999999999999875 34666 5677888999999987 599999999
Q ss_pred eeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee-cCCCeEEEEEeeee---CCcceE
Q 007857 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ-APDGRWRVLVGGQI---DNEGMA 220 (587)
Q Consensus 146 Tg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~-~~~g~~~m~~g~~~---~~~G~~ 220 (587)
|+... ...+++++|.|+|+ ++|+|.. .+ +. ...||+.+ |. ..+|+|+|++.... +..+.+
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-------~~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-------PNNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-------CCCCCEEE-eeEEECCEEEEEEccccCCCCCCCcE
Confidence 99763 35678999999986 7999973 21 11 12478884 43 24899999996432 245679
Q ss_pred EEEEeCCCCCCEEccc
Q 007857 221 FVYWSWDFIHWTKLDH 236 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~ 236 (587)
.+++|+||.+|+..+.
T Consensus 141 ~lA~S~Dl~~W~~~~~ 156 (268)
T cd08993 141 WLSFSPDLVHWGNHRF 156 (268)
T ss_pred EEEECCCcCccCCCeE
Confidence 9999999999987654
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=167.83 Aligned_cols=196 Identities=20% Similarity=0.215 Sum_probs=136.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-cCCCCeEeeeEEEccCCeEEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-~d~~Gv~SGsav~~~dg~~~l 143 (587)
+..-||. +++++|+|+||+...+ ..+|++++|+||+||+..+.+|.+... .+..++|.+.++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4567998 8889999999998543 257999999999999999988877654 4456788888876 5899999
Q ss_pred EEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc---e
Q 007857 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (587)
Q Consensus 144 ~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G---~ 219 (587)
+|++... ...+.+++|+|+|.. -.|++.. .+++..+. .....+||.|+ .+++|+|||+++......| .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCce
Confidence 9999864 245667889987753 3688753 33443222 23568999965 4468999999987542212 1
Q ss_pred EEEE-EeCCCCCCEEccccCccC---CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCe--eeEEEEe
Q 007857 220 AFVY-WSWDFIHWTKLDHPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH--DYYVLGT 292 (587)
Q Consensus 220 ~~ly-~S~Dl~~W~~~~~~~~~~---~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG~ 292 (587)
+.+. .|+|+.+|......+... ....++|||.+|+.+ | +++|++|...... ..|.+|-
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEE
Confidence 3333 368998886443222111 134589999999997 6 8999998743222 2466653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-16 Score=162.03 Aligned_cols=195 Identities=18% Similarity=0.238 Sum_probs=140.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCCceEEEEEeCCCcccEeccCCCCCCC-c-cCCCCeEeeeEEEccCCeEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG-P-YDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~---~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~-~d~~Gv~SGsav~~~dg~~~l 143 (587)
||. +++++|+||||.......+. +. ...|..++|+||+||+..+.+|.+.. . ++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 898 88889999999987644432 23 35699999999999999999887543 2 6678999999987 5999999
Q ss_pred EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEE
Q 007857 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly 223 (587)
||++......+.+++|+|+|.. -.|+.....|++... ......+||.|+ .+++|++||+++.. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--SGGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--CCCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEE
Confidence 9998754345677899998753 368876545555422 123577899954 44689999999864 2333344
Q ss_pred EeCCCCCCEEccccCcc-----CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEE
Q 007857 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (587)
Q Consensus 224 ~S~Dl~~W~~~~~~~~~-----~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (587)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|.+......|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 67899999754432321 1224578999999997 6 8999999865455556554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.68 E-value=3e-15 Score=152.03 Aligned_cols=191 Identities=21% Similarity=0.212 Sum_probs=132.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
||. +++++|+||||+..... . ...+..++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEE
Confidence 898 88999999999987643 2 35689999999999999998875 34445567899999987 58999999
Q ss_pred EeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC--CcceEE
Q 007857 145 YTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (587)
Q Consensus 145 YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--~~G~~~ 221 (587)
|++... ...+.+++|+|+|. ..|.+... ...+ .......+||.|++. ++|++||+.+.... ..+.+.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~-~~~~~~~iDp~vf~d-~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP-TSNNGNSIDPTVFKD-DDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccc---cCcC-ccCCCCccCcceEEc-CCCCEEEEEecccCCCCCCcEE
Confidence 999743 23567889999886 45554321 1111 112357899996544 56999999987542 245678
Q ss_pred EEEeCCCCCCEEccccC---ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEe
Q 007857 222 VYWSWDFIHWTKLDHPL---YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (587)
Q Consensus 222 ly~S~Dl~~W~~~~~~~---~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (587)
+.++++...|.. +.+. .......+.|||.+|+.+ | +|+|++|........|.++-
T Consensus 145 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 145 ISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888876544432 1221 112234589999999987 6 89999887543223455553
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=147.84 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=126.2
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
.||. +++++|+||||+..... ...+.+++|+||+||+.++.+|.+.. .++..++|.++++. .+|+++|+|+
T Consensus 1 ~DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys 72 (294)
T cd08991 1 ADPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYS 72 (294)
T ss_pred CCCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEE
Confidence 3898 88999999999876532 13588999999999999998887654 36778999999987 5899999999
Q ss_pred eecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC---cceEEE
Q 007857 147 GIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFV 222 (587)
Q Consensus 147 g~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~---~G~~~l 222 (587)
+.... ..+.+++|+|+|.. -.|++... +.+.. ....+||.+++. .+|+|||+++..... .+....
T Consensus 73 ~~~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 73 ANDRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred eccCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceEEC-CCCCEEEEEEecCCCCcccceEEE
Confidence 87543 55778899998753 35776432 22221 135679996544 679999999764321 233333
Q ss_pred EEeCCCCCCEEccc----cCcc--------------CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 223 YWSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 223 y~S~Dl~~W~~~~~----~~~~--------------~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
--|.|+.+|..... +... .....+.|+|.+++.+ | +|+|++|..
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~ 203 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSAN 203 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECC
Confidence 35788877742111 1110 0123478999999997 6 899998864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=147.99 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=122.5
Q ss_pred cceeecCCCCCc-cCCCcceEECCEEEEEEEECCC-----------CC--CCCCCceEEEEEeCCCcccEeccCCCCCC-
Q 007857 56 TSYHFRPPQNWI-NDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCPS- 120 (587)
Q Consensus 56 p~yH~~p~~gw~-nDPnG~~~~~G~YHlfyQ~~P~-----------~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P~- 120 (587)
|..=+.+..+.. .||..+++.+|+|||||++... .+ .|. ....+||+|+||+||++.+++|.+.
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccCCC
Confidence 444444444443 6998899999999999996531 11 245 6788999999999999999888754
Q ss_pred -CccCCCCeEeeeEEEccCCeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCC-----------
Q 007857 121 -GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP----------- 184 (587)
Q Consensus 121 -~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p----------- 184 (587)
..||..++|.++++. .+|+++|||++.... ..+.+++|+|++.. -.|++. .+||+.+.
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 358999999999986 699999999975421 23567899998763 259886 68998542
Q ss_pred -------CCCCCCCccCCeEEeecCCCeEEEEEeeeeC--------CcceEEEEEeCCCC-CCEEc
Q 007857 185 -------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 185 -------~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--------~~G~~~ly~S~Dl~-~W~~~ 234 (587)
+.++...+.||.|+. .+|+|||++.+... ..-++.+..|+++. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 124556678999654 47999999966431 11247788888865 57654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=143.43 Aligned_cols=189 Identities=21% Similarity=0.226 Sum_probs=127.4
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEccCC
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~Gv~SGsav~~~dg 139 (587)
+.||. +++++|+||||+... ++++++|+||+||++.+.+|.+... ....++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 36998 899999999998753 4899999999999999988865432 3456799999987 599
Q ss_pred eEEEEEeeecCC-CceeEEEEEecCC-CCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~~A~s~D~-~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
+++|||++.... ....+++|+|+|. . ..|++. +||+....+......+||.|+.. ++|++||++++.. .
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf~d-~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVFYD-EDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEEEc-CCCCEEEEeeecc--C
Confidence 999999987543 4566789999875 2 379874 58886433223457889996544 6899999998642 1
Q ss_pred ceEEEEE-eCC---CCCCEEccccCccCC-CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCC---eeeEE
Q 007857 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYV 289 (587)
Q Consensus 218 G~~~ly~-S~D---l~~W~~~~~~~~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~---~~~Y~ 289 (587)
| +.+.+ ++| ...|......+.... .....|-|.+|+-+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 22222 222 223321111111111 23468999999987 6 889988854222 24455
Q ss_pred EEe
Q 007857 290 LGT 292 (587)
Q Consensus 290 vG~ 292 (587)
++-
T Consensus 204 v~~ 206 (288)
T cd08998 204 IRV 206 (288)
T ss_pred EEE
Confidence 543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-13 Score=141.05 Aligned_cols=170 Identities=23% Similarity=0.281 Sum_probs=120.5
Q ss_pred ccCCCcceEE--CCEEEEEEEE-C---CCC-CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 67 INDPNGPMYY--KGVYHLFYQY-N---PLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 67 ~nDPnG~~~~--~G~YHlfyQ~-~---P~~-~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
.-||. +++. +|+|||||.. . |.. ..|.....+|+|+|+| |+||++++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 68998 8887 8899999952 1 111 2344246799999999 99999998777664455556799999987 59
Q ss_pred CeEEEEEeeecC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
|+++|||+.... ......++|+|+|. .+|+..+ ++.. + .....||.|+ +..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~-~----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDL-D----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--cccc-C----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12356788999885 6898753 3321 1 1346799965 43579999999653
Q ss_pred eCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 214 ~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
.. ...+.+..|+|+.+|+..+..+ . ...-|+|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i-~---~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVL-G---DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccc-c---CCCCCCCCeeEEC
Confidence 22 2235677899999999765332 2 1234999999987
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.6e-12 Score=130.38 Aligned_cols=190 Identities=18% Similarity=0.094 Sum_probs=130.6
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC----ccCCCCeEeeeEEEcc-CCeEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPF 142 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~----~~d~~Gv~SGsav~~~-dg~~~ 142 (587)
.||. +++++|+||+|-.....+..+ ...|...+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++
T Consensus 4 h~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~ 80 (265)
T cd08985 4 HGGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYV 80 (265)
T ss_pred ccCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEE
Confidence 3554 899999999998765432111 34688999999999999999998764 3344578999998743 58999
Q ss_pred EEEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEE
Q 007857 143 ILYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAF 221 (587)
Q Consensus 143 l~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ 221 (587)
|+|++... .....+++|+|++.. -.|+... .+. +. ....|||.|+++ ++|++||++++..+ ..+.
T Consensus 81 m~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf~D-dDG~~Yl~~~~~~~--~~i~ 146 (265)
T cd08985 81 MWMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLFVD-DDGTAYLLYSDRDN--SDLY 146 (265)
T ss_pred EEEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceEEc-CCCCEEEEEecCCC--CceE
Confidence 99998643 245578899997753 2466432 221 21 246799996554 78999999987532 2345
Q ss_pred EEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC---CCeeeEEEEe
Q 007857 222 VYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (587)
Q Consensus 222 ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 292 (587)
+.+ ++|++.+... +.. .......|||.+|+.+ | +|+|++|... .....|++.+
T Consensus 147 i~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 147 IYRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 555 3677777432 221 1234578999999998 6 8999988642 2345677665
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.6e-12 Score=129.37 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=119.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--cc----CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PY----DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~----d~~Gv~SGsav~~~d 138 (587)
+..-||. +++++|+|+||..... + ...+..++|+||+||+.++.+|.+.. ++ ...++|.+.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567998 9999999999853211 1 23589999999999999998885432 11 345799999987 59
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--- 215 (587)
|+++|+|++........+.+|.|++.. -.|+. |++.. ...+||.|++. ++|++||+.+....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~d-~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFFD-DDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeEc-CCCCEEEEecccCCccc
Confidence 999999998753334456788887763 24652 33321 15689996554 68999999876422
Q ss_pred --CcceEEEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 216 --~~G~~~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
..+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234545543 33344444432 2222223578999999987 6 889988864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-12 Score=130.74 Aligned_cols=159 Identities=23% Similarity=0.364 Sum_probs=111.0
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCCceEEEEEeCCCcccEec-cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL-SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 72 G~~~~~G~--YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~-~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
|++.++|. |||.|...-. ..+ ..+.|+|.|+|.+||++. .+.|.|+..++..||.++.++. .+|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEe
Confidence 46656665 8998865432 222 348999999999999987 4689999999999999999998 589999999998
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeec-CCCeEEEEEeeeeCCcceEEEEE
Q 007857 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQA-PDGRWRVLVGGQIDNEGMAFVYW 224 (587)
Q Consensus 149 ~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~-~~g~~~m~~g~~~~~~G~~~ly~ 224 (587)
+. ....+++|.|+|. ++|+|.. +++.... ......-+|-. ++.+ .+|+|+|+.+ .+.+.+.+
T Consensus 112 ~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~la~ 177 (312)
T PF04041_consen 112 SG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWLAY 177 (312)
T ss_dssp ES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEEEE
T ss_pred cC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEEEe
Confidence 74 4567899999997 8999974 2222111 01112235554 3332 4899999998 34678999
Q ss_pred eCCCCCCEEccccCccCCCCCcccc
Q 007857 225 SWDFIHWTKLDHPLYSVQETGMWEC 249 (587)
Q Consensus 225 S~Dl~~W~~~~~~~~~~~~~~~wEC 249 (587)
|+||++|+....++... ..+.||+
T Consensus 178 S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 178 SPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp ESSSSSEEEEBETSB---STTSSCS
T ss_pred cCCcccccccccccccC-CCCcChh
Confidence 99999998876544432 3457887
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-11 Score=124.11 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=128.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC--CCCe-EeeeEEEccCCeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d--~~Gv-~SGsav~~~dg~~ 141 (587)
+..-||. +++++|.|+||+...+.. ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5668998 999999999999866432 4588999999999999998777664333 2233 9999886 69999
Q ss_pred EEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC--cce
Q 007857 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (587)
Q Consensus 142 ~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~--~G~ 219 (587)
+|+|+.........+.+|+|++.. -.|+... .+.+. .....||.|++. ++|++||+.+..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEEe-cCCCcEEeCcccCCCcccee
Confidence 999994333455678899998763 3787653 22222 246789996555 679999999886432 234
Q ss_pred EEEEE-eCCCCCCEEcc-ccCccC---CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 220 ~~ly~-S~Dl~~W~~~~-~~~~~~---~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
+.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 55555 46776665543 122222 234688999999997 6 8899998643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.6e-11 Score=122.29 Aligned_cols=182 Identities=12% Similarity=0.072 Sum_probs=122.8
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcc-CCeE
Q 007857 65 NWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDKP 141 (587)
Q Consensus 65 gw~nDPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~-dg~~ 141 (587)
+-+.||. +++. +|+||||+.-.-....+.+...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4567998 8887 899999998653222222156799999999999999877642211 23568999998754 6999
Q ss_pred EEEEeeecCC---CceeE--EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 142 FILYTGIDAS---GQQVQ--NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 142 ~l~YTg~~~~---~~~~q--~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+|+|+..... ....+ ..+.+.|. .+|+. ..|++.+ .....|+.++ + .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~--p~~~~~~-----~~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTE--PKVWIDL-----GANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCcc-----cccCC--CeEeecC-----CCCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999986532 12223 33333354 68875 3466642 2467899954 4 25999999976432
Q ss_pred cceEEEEEeCCCC-CCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 217 EGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 217 ~G~~~ly~S~Dl~-~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
+.+.+.+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 457788899987 787654321 112346899999999832 288888765
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-11 Score=126.89 Aligned_cols=186 Identities=16% Similarity=0.278 Sum_probs=125.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCCceEEEEEeCCCcccEeccCCCCCC--CccCCCCeEeeeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~---------~~g~~~~Wgha~S~Dlv~W~~~~~al~P~--~~~d~~Gv~SGsa 133 (587)
.+..||. ++.++|+|+||....-... .+. ...+-..+|+||+||+.++.++.|. ..|. .++|.+.+
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 3568998 7889999999987643221 122 3468899999999999999988742 3443 47899999
Q ss_pred EEccC----CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCC-CccCCeEEeecCCCeEE
Q 007857 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDD-MFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~~-~fRDP~V~w~~~~g~~~ 207 (587)
+. .+ |++||+|+.. ...+++|+|++.. -.|+...++|++... ++.... .-.||.++++ ++|++|
T Consensus 84 ~~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~D-dDG~~Y 153 (311)
T cd09003 84 AV-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVD-DDGQGY 153 (311)
T ss_pred EE-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEEC-CCCCEE
Confidence 87 46 9999999853 2357899988753 368875457887432 222112 2479996554 789999
Q ss_pred EEEeeeeC-----CcceEEEEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 208 m~~g~~~~-----~~G~~~ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+++.... ..+.+.+.+ ++|+..- .+++.. ......+|.|.+|+-+ | +++|.+|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99985321 123355555 3566543 232211 1123578999999987 6 899988864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.9e-11 Score=120.96 Aligned_cols=137 Identities=23% Similarity=0.317 Sum_probs=99.0
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC-------CCCccCCCCeEeeeEEEc
Q 007857 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (587)
Q Consensus 65 gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~d~~Gv~SGsav~~ 136 (587)
+.+-||. +++.+ |+|||||+.+... ... ...+++|+|+|+++|+..+..+. +...++...+.++.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3456887 77777 9999999976532 223 67899999999999999876542 223344456889998875
Q ss_pred cC-CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
++ |+++|+|++........+.+|.|.|+ ++|++....+.+ ..+.....+++|.++ + .+|+|||++.+.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 33 89999999876445577889999886 899986433212 222345678999954 4 469999999875
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-11 Score=102.07 Aligned_cols=75 Identities=31% Similarity=0.391 Sum_probs=54.9
Q ss_pred ccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEE-EecC--CCCeEEEEEEEeCceEE
Q 007857 452 GPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV-DIDP--HHGKVSLRSLVDHSIVE 528 (587)
Q Consensus 452 ~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~-~~~~--~~~~~~LrifvD~S~vE 528 (587)
.++||.|+++++.+++|.|.||.. .+. +++||++++.. ...+.++... .... .++.++||||||+|+||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~---~~~---l~vDR~~s~~~--~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPA---NGT---LTVDRTNSGIN--DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETT---TTE---EEEEETTSSTT--SCCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECC---CCE---EEEeCCCCccc--ccccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 369999999999999999999953 243 45699999832 2333444322 2222 23668999999999999
Q ss_pred EEcCCC
Q 007857 529 SFAARG 534 (587)
Q Consensus 529 vFvNdG 534 (587)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999987
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.6e-10 Score=116.45 Aligned_cols=180 Identities=17% Similarity=0.184 Sum_probs=117.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc-------CCCCeEeeeEEEccCCe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------d~~Gv~SGsav~~~dg~ 140 (587)
.||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|+
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~----------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~ 68 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP----------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGK 68 (279)
T ss_pred CCCE-EEEECCEEEEEEecC----------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCE
Confidence 3898 888999999996531 37889999999999999888643322 235799999987 5899
Q ss_pred EEEEEeeecCC-CceeEEEEEecCCCCCcc-ceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l-~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
++|||++.... ....+++|+|++..+|.- ..|++ ..|++..... ......||.++++ ++|++||+.++.. .|
T Consensus 69 yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g 142 (279)
T cd08988 69 FYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC
Confidence 99999986432 346778999987644321 12443 2566643211 1234579996655 6899999998632 22
Q ss_pred eEEEEE-eCCCCCCEEcccc--CccC-CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 219 MAFVYW-SWDFIHWTKLDHP--LYSV-QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 219 ~~~ly~-S~Dl~~W~~~~~~--~~~~-~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+.+.+ ++|+..-...+.+ +... ......|-|-+++-+ | +++|++|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 3454432111111 1111 123467999999987 5 888888863
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-10 Score=115.92 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=93.9
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEccCCe
Q 007857 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 65 gw~nDPnG~~~~--~G~YHlfyQ~~P~~-~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~Gv~SGsav~~~dg~ 140 (587)
.++.||. ++++ +|+||||....... ..+ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 3568998 8887 99999999765332 111 24689999999999999998886543 34456799999876 6999
Q ss_pred EEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEee
Q 007857 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
++|+|+..... ....+.+|+|++.. -.|+.....|+... .....||.+ |.+++|++||+++.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 99999876432 22346788887653 25765433344321 124579985 44478999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.1e-10 Score=115.73 Aligned_cols=171 Identities=18% Similarity=0.219 Sum_probs=114.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEecc-CCCCCCC------------------ccCCCC
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDINS 127 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~-~al~P~~------------------~~d~~G 127 (587)
..|. +++++|+|||||+..-.........+.|+|+|++.. .|+++. +.|.|.. .+|..+
T Consensus 113 waP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 3465 888999999999853211000103578888888876 798763 4566642 367777
Q ss_pred eEeeeEEEccCCeEEEEEeeecC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee
Q 007857 128 CWSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~ 200 (587)
+..++++. .+|+++|||+|+.. ...+.+++|+|++.-+ .|+|.+.|||+... ++ .+ ||+
T Consensus 192 v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~G----Pf~r~~~nPi~~~~------~~--~~-~~~ 257 (349)
T cd08992 192 VHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEG----PYVKSPYNPITNSG------HE--TC-VWQ 257 (349)
T ss_pred eECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCC----CCEeCCCCcccCCC------Cc--eE-EEe
Confidence 88888766 69999999999752 2356789999988753 58898889998421 21 36 698
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
. .+.+..++.....++|. +..|+|.++|+-...+...+...|..+|||-+.-+
T Consensus 258 ~-~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 258 Y-KGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred c-CCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 4 55663344333333453 78999999998765433333345677888877765
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-09 Score=109.44 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=113.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc------CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~------d~~Gv~SGsav~~~d 138 (587)
+..-||. +++++|+||||+..... .......+|+||+||+..+.++...... ...++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 5567998 99999999999853211 1236788999999999998877542211 235799999877 59
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|+++|+|+.........+++|++++..+ .|+. |+... ....||.+++. ++|+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f~D-~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLFHD-DDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceEEc-CCCCEEEEecCC----C
Confidence 9999999986433445678998877642 4653 44321 23579996554 789999998752 2
Q ss_pred eEEEEE-eCCCCCCEEcccc----CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 219 ~~~ly~-S~Dl~~W~~~~~~----~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.+.+.+ +.|... ..+.+ +.........|-|-+|+-+ | +++|++|...
T Consensus 139 ~i~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 139 GIRLQEYSPAEKK--LIGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred cEEEEEEChhhCC--CCCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 234443 222211 01111 1111123468999999987 6 8889888643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-09 Score=109.53 Aligned_cols=170 Identities=14% Similarity=0.119 Sum_probs=112.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-----------cCCCCeEeeeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~d~~Gv~SGsa 133 (587)
++.-||. +++++|+|+||....- + ...+...+|+||+||+..+.++.+... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557998 8899999999986421 1 124678899999999999877643211 11347999999
Q ss_pred EEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
+. .+|+++|+|+... ..+.+|+|++.. -.|+.. .++ ....||.+++. ++|+.||+.+..
T Consensus 82 ~~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~D-~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RY-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLFD-DDGTAYLVYGGG 140 (269)
T ss_pred EE-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEEc-CCCCEEEEeCCC
Confidence 87 5999999999852 346788887653 246432 111 14579996554 789999999753
Q ss_pred eCCcceEEEEE-eCCCCCCEEccccCccCC--CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 214 ~~~~G~~~ly~-S~Dl~~W~~~~~~~~~~~--~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.+.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|...
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~~ 192 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAWG 192 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecCC
Confidence 234443 567666521111122211 13578999999976 5 8899998753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.4e-09 Score=108.67 Aligned_cols=180 Identities=17% Similarity=0.132 Sum_probs=112.7
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCCceEEEEEeCCCcccEeccCCCCCCCc------------cCCCCe
Q 007857 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (587)
Q Consensus 66 w~nDPnG~~~~-~G~YHlfyQ~~P~~~----~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~d~~Gv 128 (587)
|+-||. ++.. +|+|||+......+. .|........++|+||+||+..+.++.+... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 679998 7766 679999987543221 1110245779999999999999887754321 234579
Q ss_pred EeeeEEEccCCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
|.+.+.. .+|+++|+|+..... ....+++|++++.. -.|+....+ .+ ...-.||.+ +.+.+|++|
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~----~~----~~~~iD~~~-f~D~DG~~Y 145 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGN----KP----LFPGIDPSL-FEDDDGKVY 145 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCC----CC----CCCccCCce-EEcCCCCEE
Confidence 9999887 589999999976432 33456778776653 246653221 01 123569995 455789999
Q ss_pred EEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC----CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 208 VLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ----ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 208 m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~----~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+.+... + .--++|+....-....+.... .....|-|-+++-+ | +++|++|..
T Consensus 146 l~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 146 LVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9987531 1 112455554321111111110 12357999999976 5 899998864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.4e-09 Score=108.47 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=76.8
Q ss_pred eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcC--CCCCCCCCccCCeEEeecCCCeEE
Q 007857 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~--p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
.+.++. .+|+++|||++........+++|+|+|+ ++|++.+ +|+|.+ ...++...++||.|+ + .+|+||
T Consensus 2 nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~ 72 (268)
T cd08993 2 NPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYY 72 (268)
T ss_pred cCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEE
Confidence 456666 5999999999876556778999999996 8999874 566533 233566789999965 4 488999
Q ss_pred EEEeeee--CCcceEEEEEeCCCCCCEEcccc
Q 007857 208 VLVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (587)
Q Consensus 208 m~~g~~~--~~~G~~~ly~S~Dl~~W~~~~~~ 237 (587)
|++++.. ....++.+++|+|+.+|++.+.+
T Consensus 73 m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 73 ITYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 9998865 34457899999999999998653
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-08 Score=104.84 Aligned_cols=188 Identities=15% Similarity=0.129 Sum_probs=118.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCC-ccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
||. ++.++++||||+.-.. .....++|+||+||+....++ .+.. .....++|.+.+.. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 898 8899999999986331 247899999999999865332 2222 13345799999987 599999999
Q ss_pred eeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---CcceE
Q 007857 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (587)
Q Consensus 146 Tg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~---~~G~~ 220 (587)
+.... ...+.+++|.+++..++ +-.|+.. .+++... + ..-.||.++ .+ +|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccE
Confidence 97653 23456678887652112 2478864 3444211 1 234699954 43 5999999875421 12235
Q ss_pred EEEEeCCCCCCEEcccc--CccCCC------CCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEe
Q 007857 221 FVYWSWDFIHWTKLDHP--LYSVQE------TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--~~~~~~------~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (587)
.+.+..+...+. +++ +..... ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555655543443 322 211111 1357999999997 6 88999987544345566664
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-08 Score=105.37 Aligned_cols=120 Identities=18% Similarity=0.262 Sum_probs=85.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
.-||. +++.+|+|+|+..-. . + ...+...+|+||+||+.++.++.+. ..++|.+.+.. .+|+++|+|+
T Consensus 15 ~~DP~-i~~~~~~yY~~~t~~--~--~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 15 YPDPS-ILRDGEDYYMTHSSF--K--Y--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCE-EEEECCEEEEEEcch--h--c--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 45997 999999999976521 1 1 2357889999999999988877542 35799999876 6999999999
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEee
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
.........+.+|++++..+ .|++ |+... .....||.|+++ ++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPEG----PWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCCC----CCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 87544456678898876532 4653 33211 122469996665 78999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-07 Score=98.82 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=104.3
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEee
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg 147 (587)
.||. +++++|+|+||-... + ++.+|+||+||+..+.++. ..++|.+++.. .+|++|++|+.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 6998 888999999986531 1 3678999999999987763 45799999987 58987665553
Q ss_pred ecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcce--------
Q 007857 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM-------- 219 (587)
Q Consensus 148 ~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~-------- 219 (587)
. .+.+|+|+|..++ -|+.. +. . ......||.|++. ++|++||+.|.... .+.
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~----~~--~---~~~~~IDp~vf~D-dDGk~Yl~~g~~~~-~~i~~~eL~~d 124 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV----DK--S---FPPGLADPALFID-DDGRLYLYYGCSNN-YPLRGVEVDPD 124 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc----cc--c---cCCCccCCceEEC-CCCCEEEEEecCCC-CCeEEEEECcc
Confidence 2 2357888765221 35431 10 1 1234579996544 68999999875321 110
Q ss_pred --------EEEE-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEE
Q 007857 220 --------AFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290 (587)
Q Consensus 220 --------~~ly-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~v 290 (587)
..++ .+..-..|+..+.-.......+..|-|-+++-+ | +++|++|........|.+
T Consensus 125 ~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v 189 (295)
T cd08982 125 TFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYAD 189 (295)
T ss_pred cCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeE
Confidence 1111 122233465443211101123467899999876 5 889998875433344665
Q ss_pred Ee
Q 007857 291 GT 292 (587)
Q Consensus 291 G~ 292 (587)
|-
T Consensus 190 ~~ 191 (295)
T cd08982 190 GV 191 (295)
T ss_pred EE
Confidence 54
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.5e-08 Score=97.49 Aligned_cols=151 Identities=19% Similarity=0.254 Sum_probs=109.9
Q ss_pred cceEECCEEEEEEEECC--CCCCCCCCceEEEEEeCCCcc-cEec-cCCCCC-CCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 72 GPMYYKGVYHLFYQYNP--LGPLFGDKMIWAHSVSYDLIN-WIHL-SHALCP-SGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 72 G~~~~~G~YHlfyQ~~P--~~~~~g~~~~Wgha~S~Dlv~-W~~~-~~al~P-~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
|+++.++++||+|+--- +...-. ..|.+.|.|+|+++ |+.. .+.+.| ..+++.-||.++.++. .+|+++|.||
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~mtYT 112 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHSS-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYMTYT 112 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCcc-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEEEEE
Confidence 58889999999998610 001113 67899999999999 9866 467889 6678888999999987 5999999999
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---CcceEEEE
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMAFVY 223 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~---~~G~~~ly 223 (587)
|.+ +..+..++|++.|. .+|+|.+ +++. | +.||-.++=+.-+|+|+|+---... ..+-+++.
T Consensus 113 a~s-~~g~~~~la~t~~f-----~n~~rig--~i~~-p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~niwia 177 (314)
T COG2152 113 AYS-DKGPRLALAVTKDF-----LNWERIG--AIFP-P------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNIWIA 177 (314)
T ss_pred ecC-CCCcccchhhhhhh-----hhhhhcc--cccC-C------CCCCceEeeEEecCcEEEEEeecccccCccCceEEE
Confidence 985 46677899999987 7899863 3432 2 3344432111236899998654332 24669999
Q ss_pred EeCCCCCCEEccccCc
Q 007857 224 WSWDFIHWTKLDHPLY 239 (587)
Q Consensus 224 ~S~Dl~~W~~~~~~~~ 239 (587)
.|+||.+|.....++.
T Consensus 178 ~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 178 FSPDLEHWGIHRKLLG 193 (314)
T ss_pred EcCCccCCCccceeec
Confidence 9999999987654443
|
|
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-07 Score=95.22 Aligned_cols=191 Identities=16% Similarity=0.295 Sum_probs=122.9
Q ss_pred ecCCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeee
Q 007857 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGS 132 (587)
Q Consensus 60 ~~p~~gw---~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGs 132 (587)
+.|..|| +.||- +++++|+||||-..... ..|+-+-+. |+||+..+-|+. +.. ...+.|.+.
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPq 82 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQ 82 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCE
Confidence 4566788 68998 88889999999775431 224333333 999998876652 221 234578888
Q ss_pred EEE-ccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 133 VTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 133 av~-~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
+.. .+++++||+|+. . ..++|+|+|..+|. .|.. ..|++............|+.|+ . ++++.||+..
T Consensus 83 Vfyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~ 150 (303)
T cd08987 83 VFYFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFS 150 (303)
T ss_pred EeeeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEe
Confidence 872 268999999995 2 24688888887774 6775 3688753222233456899974 3 5888888885
Q ss_pred eeeCCcceEEEEEeC-CCCCCEEc-cccC--cc-CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCee
Q 007857 212 GQIDNEGMAFVYWSW-DFIHWTKL-DHPL--YS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286 (587)
Q Consensus 212 ~~~~~~G~~~ly~S~-Dl~~W~~~-~~~~--~~-~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~ 286 (587)
.. .| .||+|+ .+.+.... +..+ .. .......|-|.+++++ | ..+++|+++..+..+.
T Consensus 151 ~d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~ 212 (303)
T cd08987 151 DD---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGG 212 (303)
T ss_pred cC---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCC
Confidence 43 34 588873 23222110 1111 11 1224589999999998 5 2389999998765444
Q ss_pred eEEEE
Q 007857 287 YYVLG 291 (587)
Q Consensus 287 ~Y~vG 291 (587)
.|+++
T Consensus 213 rYfrs 217 (303)
T cd08987 213 RYFRS 217 (303)
T ss_pred CeEEE
Confidence 68877
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.3e-07 Score=96.17 Aligned_cols=194 Identities=19% Similarity=0.178 Sum_probs=117.8
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCc----ccEeccCCCCCCCcc-CCCCeEeeeEEEcc
Q 007857 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-DINSCWSGSVTILP 137 (587)
Q Consensus 68 nDPnG~~~-~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~Dlv----~W~~~~~al~P~~~~-d~~Gv~SGsav~~~ 137 (587)
-|+.|-+. ++|.--+|-.--|.. ..|+ ..|+++.-|++.. +|+..+.++...... ....-|||||++..
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~ 141 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNN 141 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEEST
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcC
Confidence 46777544 789444454544432 3567 8899999999998 999998866544331 22347999999986
Q ss_pred -CCeEEEEEeeecC--C--CceeE-----EEEEecCCCCCccceeeeecCCcEEcCCCCCC-------CCCccCCeEEee
Q 007857 138 -GDKPFILYTGIDA--S--GQQVQ-----NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-------DDMFRDPTTAWQ 200 (587)
Q Consensus 138 -dg~~~l~YTg~~~--~--~~~~q-----~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~-------~~~fRDP~V~w~ 200 (587)
||++.||||.... . ..|+. +++...+.+ -.+..|++. ..++.+.+.++ ...||||++|-.
T Consensus 142 ~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~-v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~D 218 (428)
T PF02435_consen 142 DDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDG-VWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFED 218 (428)
T ss_dssp TTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTE-EEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEE
T ss_pred CCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCc-eeEccccce--eEeeccchhhhhChhhcCCccccCCeeEEC
Confidence 7999999999643 1 22332 133333322 222345443 35665432221 267999996544
Q ss_pred cCCCeEEEEEeeee--C-------------------------------CcceEEEEEeC--CCCCCEEccccCccCCCCC
Q 007857 201 APDGRWRVLVGGQI--D-------------------------------NEGMAFVYWSW--DFIHWTKLDHPLYSVQETG 245 (587)
Q Consensus 201 ~~~g~~~m~~g~~~--~-------------------------------~~G~~~ly~S~--Dl~~W~~~~~~~~~~~~~~ 245 (587)
.++|+-||+.-+.. + ..|+|.|.+.+ ++..|+...+++.+..-..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 36899999984422 0 14677787764 4568999875555433345
Q ss_pred ccccCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 246 MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 246 ~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
..|=|+++.++ | ||+|+.+.
T Consensus 299 e~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 299 ELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp -EEEEEEEEET--T-------------EEEEEEEE
T ss_pred cccCCcEEEEC--C-------------EEEEEEEe
Confidence 89999999999 7 89987653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.6e-07 Score=97.13 Aligned_cols=108 Identities=21% Similarity=0.263 Sum_probs=81.7
Q ss_pred cCCCcceEECCEEEEEEEECCCC----CCCCCCceEEEEEeCC-CcccEe-ccCCCCCCC-ccCCCCeEeeeEEEccCCe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYD-LINWIH-LSHALCPSG-PYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~D-lv~W~~-~~~al~P~~-~~d~~Gv~SGsav~~~dg~ 140 (587)
-+|. +++++|+|||||...... ...+ ....|+|+|+| +-+|++ ..++|.|.. .||..++..++++...+|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 4676 788899999999976431 1123 56899999999 469999 456677754 3677789999998754899
Q ss_pred EEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEE
Q 007857 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (587)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi 181 (587)
++|+|+|.... ..+.|++|+|+|.. .+|+|...+||+
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 45788999998863 479997656664
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-06 Score=90.56 Aligned_cols=131 Identities=20% Similarity=0.221 Sum_probs=87.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc--CCCCCCCccCCCCeEeeeEEEcc-CCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~--~al~P~~~~d~~Gv~SGsav~~~-dg~~~l~Y 145 (587)
.|. ++..+|+|||||..+... ... ....++|+|+|+++|++.+ +.+.+...++..++-.+.++.++ +|+++|+|
T Consensus 64 sgs-~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~ 140 (280)
T cd08995 64 TGS-VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLL 140 (280)
T ss_pred EeE-EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEE
Confidence 454 677899999999865422 112 4678999999999999874 33432333443445577777653 58999999
Q ss_pred eeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 146 TGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 146 Tg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.+... .....+.++.|+|+ ++|+.. .+++.+.. ...+--|.+ ++ .+|+|||+++.+.
T Consensus 141 g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 141 ATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 87542 23345667788886 799875 46654321 234667874 44 5799999998764
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=88.87 Aligned_cols=157 Identities=11% Similarity=0.093 Sum_probs=98.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
+..|. +++++|+|||||..+-.+ .. ....++|+|+|.. .|++.+..+... +.+..+...+++++++||+++|+|
T Consensus 62 ~waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~-~~~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 62 FWAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCC-PEGEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred ccCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEec-CCCCCCccCCCeEECCCCCEEEEE
Confidence 34565 889999999999876543 22 5679999999965 999875332210 112234678888886689999999
Q ss_pred eeecCC--CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee--CC--cc
Q 007857 146 TGIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN--EG 218 (587)
Q Consensus 146 Tg~~~~--~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~--~~--~G 218 (587)
.+.... ..+.+.++ .+.|+ .+|.... ..++.+...+....+--|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 764321 12224444 45554 5665421 23333322233345677885 45 4899999997643 11 12
Q ss_pred eEEEEEeCCCC-CCEEccc
Q 007857 219 MAFVYWSWDFI-HWTKLDH 236 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~~~ 236 (587)
++.+++|+++. .|+....
T Consensus 209 ~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 209 AVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEEeCCCcCCcCCCCC
Confidence 46788999987 8887643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.4e-06 Score=85.12 Aligned_cols=152 Identities=13% Similarity=0.041 Sum_probs=95.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCC-CCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+--|. +++++|+|||||..... .+ ....++|+|+|.. .|++.... +.+ ...+...+.++++++++||+++
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 3345677 88999999999987643 23 5679999999976 89987542 322 2223345678888887789999
Q ss_pred EEEeeecCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 143 ILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|+|.+. +...++ .+.|. .+|+.. ..+|..+. .....-+-=|.+ ++ .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--Cc
Confidence 999864 233444 34454 566542 12332111 111122346874 45 5899999998753 34
Q ss_pred eEEEEEeCCCC-CCEEccccC
Q 007857 219 MAFVYWSWDFI-HWTKLDHPL 238 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~~~~~ 238 (587)
.+.+.+|+++. -|+..+.++
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEEcCCCCCCcccCcEEe
Confidence 56666888865 577665443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-06 Score=86.36 Aligned_cols=157 Identities=15% Similarity=0.144 Sum_probs=98.9
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
.+-+-+|. +++++|+|||||+....+ .. ..+.+.|+|+|+.+|....... +... ...++..++++.++||+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEE
Confidence 45567898 899999999999987652 22 5679999999999997653211 1111 23457899999876699999
Q ss_pred EEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC--CcceE
Q 007857 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMA 220 (587)
Q Consensus 144 ~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--~~G~~ 220 (587)
+|.+.... ....+.++.+++.. .|.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875421 23345666665542 2222 233321111112235678985 55 47999999876532 22356
Q ss_pred EEEEeCCCC-CCEEcc
Q 007857 221 FVYWSWDFI-HWTKLD 235 (587)
Q Consensus 221 ~ly~S~Dl~-~W~~~~ 235 (587)
.+++|+++. -|+..+
T Consensus 201 ~~~~s~~~~Gp~~~~~ 216 (271)
T cd08978 201 GYATSDSIDGPYVKKG 216 (271)
T ss_pred EEEECCCCCCCcCcCC
Confidence 778888864 465543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.2e-06 Score=90.40 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=64.2
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCcceEEEEEeCCCCCCEEccccCccC-CCCCccccC
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSV-QETGMWECP 250 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~G~~~ly~S~Dl~~W~~~~~~~~~~-~~~~~wECP 250 (587)
++|||.+.. ....+|||+|++..++|+|||+..... .....+.+|+|+||.+|+..+..+... ..+.+| ||
T Consensus 5 ~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 689997643 357899999876546889999876532 122358899999999999887543222 234477 99
Q ss_pred eEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 251 DIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 251 dlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986434 889888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.2e-05 Score=83.14 Aligned_cols=154 Identities=16% Similarity=0.184 Sum_probs=93.3
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.+-.|. +++.+|+|||||....... . ....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~ 125 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRDE--K-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLY 125 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCCC--C-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEE
Confidence 344777 8999999999998764331 2 5788999999977 8887654333322 2356889988777999999
Q ss_pred EeeecCCC--ceeEEEEEecCCCCCccceeeeecC---CcEEcC-------C-C---CCCCCCccCCeEEeecCCCeEEE
Q 007857 145 YTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSG---NPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 145 YTg~~~~~--~~~q~~A~s~D~~d~~l~~w~k~~~---nPvi~~-------p-~---~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
|+...... ......+.+.|. .+|..... .|+..+ + . ..+..-.--|.+ ++ .+|+|||
T Consensus 126 ~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl 198 (294)
T cd08991 126 YSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYL 198 (294)
T ss_pred EEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEE
Confidence 98654321 233445566664 44542111 122111 0 0 011123456774 44 4799999
Q ss_pred EEeeee-CCcc-eEEEEEeCC-CCCCEEc
Q 007857 209 LVGGQI-DNEG-MAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 209 ~~g~~~-~~~G-~~~ly~S~D-l~~W~~~ 234 (587)
++.+.. .... .+.+.+|++ +-.|+..
T Consensus 199 ~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 199 TYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 987543 1111 356678887 4679875
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.6e-06 Score=89.24 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=79.2
Q ss_pred CCCeEeeeEEEccCCe--EEEEEeeecCCCce-eEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeec
Q 007857 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (587)
Q Consensus 125 ~~Gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~ 201 (587)
...+|-+.|++. +|+ ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+...++....-||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 456999999874 555 89988877654444 8999999997 899886 579997665666778899998765
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccc
Q 007857 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDH 236 (587)
Q Consensus 202 ~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~ 236 (587)
+++|||.+.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6799999987765555788999999999999874
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.37 E-value=1e-05 Score=82.43 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=99.5
Q ss_pred CccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcc-cEecc-CCCCCC--CccCCCCeEeeeEEEccCCe
Q 007857 66 WINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCPS--GPYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 66 w~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~-W~~~~-~al~P~--~~~d~~Gv~SGsav~~~dg~ 140 (587)
-+-.|. +++.+ |+|+|||...... .+ ....+.|+|+|+.. |+... ..+.+. ...+...+.+++++.++||+
T Consensus 59 ~~wap~-v~~~~~g~~~l~yt~~~~~--~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 59 GIWAPS-IVYIENGKFYLYYTDVSFT--KN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred cEecce-EEEcCCCCEEEEEEeecCC--CC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 355776 77888 9999999876431 23 57899999999975 55431 112222 12233457899998875699
Q ss_pred EEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC----C
Q 007857 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----N 216 (587)
Q Consensus 141 ~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~----~ 216 (587)
++|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+... .
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998764333456788999886 6887653222232211 23466789854 4 47999999977541 1
Q ss_pred cceEEEEEeCC-CCCCEEc
Q 007857 217 EGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 217 ~G~~~ly~S~D-l~~W~~~ 234 (587)
.-.+..++|++ +-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22455667765 4456544
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.9e-06 Score=84.77 Aligned_cols=121 Identities=15% Similarity=0.088 Sum_probs=71.4
Q ss_pred ccCCeEEeecCCCeEEEEEeeeeC---------CcceEEEEEeCCCCCCEEccccCccCC--------------CCCccc
Q 007857 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (587)
Q Consensus 192 fRDP~V~w~~~~g~~~m~~g~~~~---------~~G~~~ly~S~Dl~~W~~~~~~~~~~~--------------~~~~wE 248 (587)
+|||+|+ ++.+|.|||+..+... ..+.+.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457788888765421 124588999999999999875442211 123455
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEeeCCC--CeeeEEEEeecCCCCeeccCCCCCCCCCceecccCCCcccceE
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD--KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTF 326 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~ 326 (587)
||+++.++ | +|+|.+|.... ......+..-+.-.+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 89998886431 11223333322222345432110 000 012346778
Q ss_pred ecCCCCcEEEE
Q 007857 327 FDSAKNRRVLW 337 (587)
Q Consensus 327 ~d~~~grri~~ 337 (587)
.|. +|+.+|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 874 7888776
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.25 E-value=1e-05 Score=83.07 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=56.5
Q ss_pred CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccC---------CCCCccc
Q 007857 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (587)
Q Consensus 178 nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~---------~~~~~wE 248 (587)
||||. .++.||.|+. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67873 3577999654 37899999865432233 6899999999999987644321 123577
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
||+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 888888864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.4e-05 Score=79.80 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=92.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC--cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl--v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+-.|. +++.+|+|||||..+..+. + ....++|+|+|+ -.|+..++.+.+........+..+++++++||+++
T Consensus 56 ~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 56 GNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 3455676 8889999999998764332 2 567899999998 79998876665543222335678999887789999
Q ss_pred EEEeeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-C---Cc
Q 007857 143 ILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---NE 217 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~---~~ 217 (587)
|+|.+.. ..+.++. +.|.+.+ ..+... ...++..+. ...-...|++ ++ .+|+|||++++.. . ..
T Consensus 132 l~~~~~~----~~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~ 200 (288)
T cd08998 132 LSFGSFW----GGIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDS 200 (288)
T ss_pred EEeeecc----CCEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCC
Confidence 9997532 1223332 2332211 122110 011222221 1123568985 55 5899999986532 1 12
Q ss_pred c-eEEEEEeCCCC-CCE
Q 007857 218 G-MAFVYWSWDFI-HWT 232 (587)
Q Consensus 218 G-~~~ly~S~Dl~-~W~ 232 (587)
+ ++.+++|+++. -|+
T Consensus 201 ~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 201 TYNIRVGRSKSITGPYV 217 (288)
T ss_pred ceEEEEEEcCCCCCCcC
Confidence 2 46788998864 365
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.8e-05 Score=81.80 Aligned_cols=78 Identities=18% Similarity=0.372 Sum_probs=57.0
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
.||||. ..+.||.|++. +++|||+..+.. ..+.+.+|+|+||.+|+..+..+. ...+++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 489984 24679996543 789999765422 223478999999999999875442 2345689 89999987
Q ss_pred cCCccceeeccCCCCceeEEEEeeC
Q 007857 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 257 ~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
| |++|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 889888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.1e-05 Score=81.60 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred ceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeC-CCcccEeccCC-CCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 73 PMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 73 ~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~-Dlv~W~~~~~a-l~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
++..+ |+|+|||..+......+ ...-++|+|+ |+++|++.+.. +.+....+..+.-++.++.+ +|+++|+|++..
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g~~~ 145 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLGAGT 145 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEEEEe
Confidence 44566 99999998654321123 5678999999 89999987432 22112223345678888874 799999999876
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC--CeEEEEEeeee
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~--g~~~m~~g~~~ 214 (587)
.+....+.++.|+|+ ++|+.. .++.... ......+--|.+ ++ .+ ++|+|+++.+.
T Consensus 146 ~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 146 EDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred cCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 444566788999886 899875 3443221 112346778884 44 46 99999998764
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.9e-05 Score=80.60 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=56.1
Q ss_pred CCccCCeEEeecCCCeEEEEEeeeeCC----cceEEEEEeCCCCCCEEccccCccCC---CCCccccCeEEEeccCCccc
Q 007857 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (587)
Q Consensus 190 ~~fRDP~V~w~~~~g~~~m~~g~~~~~----~G~~~ly~S~Dl~~W~~~~~~~~~~~---~~~~wECPdlf~l~~~g~~g 262 (587)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999998664211 12378999999999999876443221 12356789999887 6
Q ss_pred eeeccCCCCceeEEEEeeCC
Q 007857 263 VDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 263 ~~~~~~~~~~k~vl~~s~~~ 282 (587)
+|+|.++...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 8888887643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00045 Score=70.89 Aligned_cols=140 Identities=9% Similarity=0.087 Sum_probs=85.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEe-cc-CCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
-|. +++++|+|||||..+ ...++|+|+|.. .|+. .+ +.+.+.. ......+++++.++||+.+|+|
T Consensus 68 AP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~ 135 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYW 135 (275)
T ss_pred CCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEE
Confidence 465 889999999999854 347899999965 7887 33 3333321 1234668888887789999999
Q ss_pred eeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcc-eEEEE
Q 007857 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG-MAFVY 223 (587)
Q Consensus 146 Tg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G-~~~ly 223 (587)
.+.. .......+.|. .+|+.. ..++.... ..-+.-|.+ ++ .+|+|||++.+.. ...+ ++...
T Consensus 136 ~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 136 GGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred cCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEE
Confidence 7531 11122344554 456432 11221111 123567884 55 5899999987753 1112 46667
Q ss_pred EeCCCC-CCEEccc
Q 007857 224 WSWDFI-HWTKLDH 236 (587)
Q Consensus 224 ~S~Dl~-~W~~~~~ 236 (587)
+|+++. -|+..+.
T Consensus 200 ~s~~~~GP~~~~~~ 213 (275)
T cd09004 200 MADSPLGPFERPGN 213 (275)
T ss_pred EcCCCCCCcccCCc
Confidence 888765 4876653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00085 Score=68.72 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=89.5
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 67 INDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 67 ~nDPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
+-=|. ++|. +|+|||||.....+ .+ ....|+|+|++.. .|+.++..+ |. ..+..++++++++||+.||
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl 135 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYL 135 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEE
Confidence 33454 6664 59999999987532 24 6789999998865 688765433 21 1335778899988899999
Q ss_pred EEeeecCCCceeEEEEEec-CCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-CcceEE
Q 007857 144 LYTGIDASGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAF 221 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G~~~ 221 (587)
+|.+.. .....++.-+ |. ..+ .+.+..... ......|. +++ .+|+|||+.+.... ....+.
T Consensus 136 ~~~~~~---~~~i~i~~L~~d~-----~~~---~~~~~~~~~----~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~ 198 (265)
T cd08985 136 LYSDRD---NSDLYIYRLTDDY-----LSV---TGEVTTVFV----GAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDAR 198 (265)
T ss_pred EEecCC---CCceEEEEeCCCc-----ccc---cceEEEccC----CCccccce-EEE-ECCEEEEEEccCCCccCCceE
Confidence 998642 1234444332 32 233 233332111 23566888 566 58999999876431 112356
Q ss_pred EEEeCCCC-CCEEccc
Q 007857 222 VYWSWDFI-HWTKLDH 236 (587)
Q Consensus 222 ly~S~Dl~-~W~~~~~ 236 (587)
.++|+++. .|+..+.
T Consensus 199 y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 199 YATATSILGPWTDLGN 214 (265)
T ss_pred EEEecCCCCCccccCc
Confidence 77888765 5776654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00012 Score=80.65 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=82.2
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~ 151 (587)
++..+|++||||..+.....+.....-++|+|+|+.+|++.+ ++|.+.......+.-++.+.. .+|+++|+|.+....
T Consensus 91 av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~ 169 (445)
T TIGR01322 91 AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTET 169 (445)
T ss_pred EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCC
Confidence 455899999999976432222212334689999999999876 455543221122345677765 589999998875433
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 152 ~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
......+..|+|+ ++|+.. .++..+.. +.....|--|- +++ -+++|+|+++.+
T Consensus 170 ~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 170 EKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred CceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 3334466777775 899875 35553320 11123466777 444 478999999764
|
|
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00039 Score=73.61 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=91.7
Q ss_pred ECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCc----ccEeccCCCCCCCccC--------------CCCeEeeeEEE
Q 007857 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLI----NWIHLSHALCPSGPYD--------------INSCWSGSVTI 135 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~~~~--g~~~~Wgha~S~Dlv----~W~~~~~al~P~~~~d--------------~~Gv~SGsav~ 135 (587)
.+|+|||||..+-..... ...+..++++++|+. .|+...+.+.+++.+- ....-++.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 459999999987421111 114678999999984 4444444455553221 11234667777
Q ss_pred cc-CCeEEEEEeeecCCC---------------------------ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 007857 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (587)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (587)
++ +|+.||++.++.... .-.+++|++++. .+.+|+-+ .|++.+...
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~v- 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANGV- 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCCc-
Confidence 54 588999999875421 124567766542 13789865 588865321
Q ss_pred CCCCccCCeEEeecCCCeEEEEEeeeeC-------CcceEEEEEeCCCC-CCEE
Q 007857 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (587)
Q Consensus 188 ~~~~fRDP~V~w~~~~g~~~m~~g~~~~-------~~G~~~ly~S~Dl~-~W~~ 233 (587)
..++..|.+ ++ .+|+|||+..++.. ....+..|.|++|. .|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 346889995 45 58999999875541 11235677888875 4544
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00097 Score=68.77 Aligned_cols=150 Identities=10% Similarity=0.147 Sum_probs=85.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-c-----cEeccCCCCCCCccCCCCeEeeeEEEccCCe
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~ 140 (587)
+.-|. +.+++|+|||||.....+. . ....|.|+|++.. - |+..++.+.+... .......+++++++||+
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 44565 8899999999998765432 1 4578999999864 3 5543343333322 12345789999988899
Q ss_pred EEEEEeeecCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----
Q 007857 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (587)
Q Consensus 141 ~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~-~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~----- 214 (587)
+||+|..... . ....-.+.|.. ..... ....++..+. +.....-|+ +++ .+|+|||+.+...
T Consensus 132 ~Yl~~g~~~~-g--i~~~eL~~d~~-----~~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 132 PWLSFGSFWG-G--IKLFELDKDTM-----KPAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEEecccCC-C--EEEEEECcccC-----CccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCC
Confidence 9999964321 1 12223344432 11000 0112322211 112345688 456 5899999886532
Q ss_pred CCcceEEEEEeCCCC-CCEE
Q 007857 215 DNEGMAFVYWSWDFI-HWTK 233 (587)
Q Consensus 215 ~~~G~~~ly~S~Dl~-~W~~ 233 (587)
+..-++.+++|+++. -|+.
T Consensus 200 ~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 200 DSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCeEEEEEEeCCCCCCCCC
Confidence 112247788998874 3443
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0027 Score=66.57 Aligned_cols=147 Identities=12% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCcceEEC----CEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEec-cCCC-CCCCc-cC-CCCeEeeeEEEccCC
Q 007857 69 DPNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SHAL-CPSGP-YD-INSCWSGSVTILPGD 139 (587)
Q Consensus 69 DPnG~~~~~----G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~-~~al-~P~~~-~d-~~Gv~SGsav~~~dg 139 (587)
-|. +++++ |+|||||... ....+.|+|++.. .|+.+ +..| .+..+ .+ .....++++++++||
T Consensus 80 AP~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 80 APS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 455 78888 9999999631 3458999999955 89975 3222 22111 11 112568899888899
Q ss_pred eEEEEEeeecC----CCceeEEEEEec-CCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 140 KPFILYTGIDA----SGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 140 ~~~l~YTg~~~----~~~~~q~~A~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
+.||+|.+... ...+...+|..+ |. .+. .+.++.-..+ ..+.-|. +++ .+|+|||++++..
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~~---~g~~~~i~~~----~~~Egp~-~~K-~~G~YYL~ys~~~ 216 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGDDM-----ISV---DGSAVTIDAP----YFFEASG-LHK-INGTYYYSYCTNF 216 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCCCc-----eec---cCCceEccCC----CceEeee-EEE-ECCEEEEEEeCCC
Confidence 99999975321 112334455333 33 222 2233331111 2456788 455 5899999987541
Q ss_pred -------CCcceEEEEEeCCCC-CCEEccccC
Q 007857 215 -------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (587)
Q Consensus 215 -------~~~G~~~ly~S~Dl~-~W~~~~~~~ 238 (587)
....++...+|+++. -|+..+.++
T Consensus 217 ~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 217 GGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 123345566887754 587755433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00055 Score=70.23 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=100.3
Q ss_pred CCcccceeecCCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeE
Q 007857 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (587)
Q Consensus 52 ~~~Rp~yH~~p~~gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~Gv~ 129 (587)
.+|++.-.+..+.++.-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 67877766655577788998 77776 9999999765443 112 3456677789999988776 344444323345677
Q ss_pred eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCCCccCCeEEeecCCCeEEE
Q 007857 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
-|..++..+|+++|+|.+..........+|.|++.. -.|+....+|++... .......-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 788888789999999997654333556789998864 356655567877531 111111222234 34556888998
Q ss_pred EEeeee
Q 007857 209 LVGGQI 214 (587)
Q Consensus 209 ~~g~~~ 214 (587)
++-+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 886544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0005 Score=75.58 Aligned_cols=131 Identities=17% Similarity=0.221 Sum_probs=81.7
Q ss_pred ceEECCEEEEEEEECC-CCC--CCCCCce-EEEEEeCCCcccEec--cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 73 PMYYKGVYHLFYQYNP-LGP--LFGDKMI-WAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P-~~~--~~g~~~~-Wgha~S~Dlv~W~~~--~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
++..+|+|||||.-+- ..+ ..+ ... -.+|+|+|+++|+.. .++|.+...+.....-++.++..++|+++|++.
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~-~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g 152 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQ-RQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIG 152 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcc-cEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEE
Confidence 4456888999998752 211 122 222 367889999999997 355655432222334567776643468999988
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC-----eEEEEEeee
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g-----~~~m~~g~~ 213 (587)
+...+..-.+.++.|+|+ ++|+.. .++...+.+.....|--|- ++. -++ +|+|+++.+
T Consensus 153 ~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPd-lf~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 153 ASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPD-LFP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCc-EEE-eCCCCCceeEEEEECcC
Confidence 765444556778888886 899874 3555331111124566776 333 344 999999875
|
|
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0012 Score=72.37 Aligned_cols=173 Identities=20% Similarity=0.301 Sum_probs=97.8
Q ss_pred cCCCcceEECCEEEEEE---EECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEcc
Q 007857 68 NDPNGPMYYKGVYHLFY---QYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILP 137 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfy---Q~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~Gv~SGsav~~~ 137 (587)
-||. ++..+..|++=- -|.|. -..+.|+||+||+.+.-.|.+... -+..|||.+++. .+
T Consensus 31 PDpS-i~rvg~dyYia~stF~~fpG---------l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~ 99 (549)
T COG3507 31 PDPS-IVRVGDDYYIATSTFEWFPG---------LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YH 99 (549)
T ss_pred CCCc-eEecCCceEEEcceEEEcCc---------eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cC
Confidence 5666 666656666532 12232 345779999999998776666532 245689999987 58
Q ss_pred CCeEEEEEeeecCCC---ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 138 GDKPFILYTGIDASG---QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 138 dg~~~l~YTg~~~~~---~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
||+++|+||...... ....+..++.+..+ -.|+. |+.-+- ..--||.+++ +++|+=||+.+...
T Consensus 100 dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~-----~~~iDPslf~-D~dGr~wlv~~~w~ 166 (549)
T COG3507 100 DGKFWLYYTDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNG-----SNAIDPSLFF-DKDGRKWLVNGSWD 166 (549)
T ss_pred CCcEEEEEecccccCCcccccccEEEEecCCC---CCccc----ceecCC-----cCccCCceee-cCCCCEEEEecccC
Confidence 999999998764321 11122233322111 24643 444221 1245999655 47899999988764
Q ss_pred CC------cceEEEEEe---CCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 215 DN------EGMAFVYWS---WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 215 ~~------~G~~~ly~S---~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
.. .|.++-+.+ ..|..+.+ + .+..+......|-|-+++.+ | .++|..+..
T Consensus 167 ~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~--g-------------YYYL~~a~g 225 (549)
T COG3507 167 GGIFMHSFAGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT--G-------------YYYLYVAEG 225 (549)
T ss_pred CCcccccccceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC--C-------------EEEEEEEcC
Confidence 22 122222222 12333321 1 12223344578999888877 4 667766653
|
|
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00037 Score=71.14 Aligned_cols=113 Identities=18% Similarity=0.255 Sum_probs=83.5
Q ss_pred CCCCC--ccCCC----CeEeeeEEEccCCeEEEEEeee-----cCCCceeEEEEEecCCCCCccce-eeeecCCcEEcC-
Q 007857 117 LCPSG--PYDIN----SCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP- 183 (587)
Q Consensus 117 l~P~~--~~d~~----Gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~~A~s~D~~d~~l~~-w~k~~~nPvi~~- 183 (587)
|.|.. ++++. .+|-++++. .++++.|+|... .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 14 i~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~ 86 (314)
T COG2152 14 ITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPA 86 (314)
T ss_pred eeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecC
Confidence 55543 34444 689999987 489999998873 2235567789999997 55 98874 799966
Q ss_pred CCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccC
Q 007857 184 PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 184 p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
...++....-||-|+. .+++|+|.+.+..+...+..+..++|+.+|++.+.++
T Consensus 87 ~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 87 NYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3234567789999654 4799999998875544467788999999999987543
|
|
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0042 Score=64.20 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=71.4
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCC----CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
+.+++|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+.. .....++++.+ +|+++|+|.+.
T Consensus 60 i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl~~~~~ 132 (288)
T cd08980 60 LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYFVWSGW 132 (288)
T ss_pred EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEEEEEcc
Confidence 67899999999985533211 1 34456666664 568998755442211 23578888875 79999999865
Q ss_pred cC--CCceeEEEEEecCCCCCccceeeeecCCcEE-cCC-CCCCC---CCccCCeEEeecCCCeEEEEEeeee
Q 007857 149 DA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 149 ~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-~~p-~~~~~---~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.. ...+...++...+. .++. +.++. ..| ..++. .-.-=|++ ++ .+|.|||++++..
T Consensus 133 ~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~-~k-~~G~yYl~yS~~~ 195 (288)
T cd08980 133 EGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAA-LK-RNGKVFLTYSASG 195 (288)
T ss_pred CCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEE-EE-ECCEEEEEEECCC
Confidence 32 12233444544332 2232 22332 222 22221 12356774 44 4799999998653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0026 Score=65.24 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=80.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
--|. +.|.+|+|||||..+. .+.+.|+|++.. .|+..+... ...++++++++||+.||+|.
T Consensus 77 WAP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 77 WAPS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred ECCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 3565 8889999999998751 124677777743 787654321 34678888888999999986
Q ss_pred eecCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe
Q 007857 147 GIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (587)
Q Consensus 147 g~~~~~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S 225 (587)
+. .+.++ .+.|. ..... ....++..+.. ......-|++ ++ .+|+|||++.+.......+.+++|
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s 203 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRS 203 (269)
T ss_pred CC------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEe
Confidence 43 23344 34443 22211 11233433321 1234567884 56 589999998765322234567899
Q ss_pred CCCCC-CEE
Q 007857 226 WDFIH-WTK 233 (587)
Q Consensus 226 ~Dl~~-W~~ 233 (587)
+++.. |+.
T Consensus 204 ~~~~GP~~~ 212 (269)
T cd09001 204 KSLTGPYES 212 (269)
T ss_pred CCCCCCcCC
Confidence 88653 544
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0086 Score=61.91 Aligned_cols=143 Identities=15% Similarity=0.062 Sum_probs=84.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
+.-|. +++++|+|||||...... + ....+.++|+|. -.|++. . +.+. .+..++++.++||+.||+|
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~ 134 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVG 134 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEe
Confidence 44576 889999999999876532 2 345678889887 378742 2 2221 4568888887789999988
Q ss_pred eeecCC----CceeEEEEEecCCCCCccceeeeecCCc--EEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-Ccc
Q 007857 146 TGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEG 218 (587)
Q Consensus 146 Tg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nP--vi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G 218 (587)
...... +...+.++-.+.. .++-. +.| +..... ....--|.| ++ .+|+|||++..... ..-
T Consensus 135 ~~~~~~~~~~~~~~i~~~~l~~~------~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~ 202 (288)
T cd09000 135 NGWDERRGYNGHGGIWLQEIDLE------TGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGH 202 (288)
T ss_pred cccCCccccCCCCcEEEEEEccc------cCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCe
Confidence 654221 1233445533221 12211 222 222111 123456884 56 58999999865421 123
Q ss_pred eEEEEEeCCCC-CCEEc
Q 007857 219 MAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~ 234 (587)
.+.+++|+++. -|+..
T Consensus 203 ~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 203 SVTVARSRSITGPYEPA 219 (288)
T ss_pred EEEEEEeCCCCCCCccC
Confidence 57788999886 67664
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.011 Score=62.62 Aligned_cols=167 Identities=19% Similarity=0.178 Sum_probs=100.0
Q ss_pred CCCcccceeecCCC---CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCCceEEEEEeCCC-cccEeccCCCC
Q 007857 51 NQPYLTSYHFRPPQ---NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALC 118 (587)
Q Consensus 51 ~~~~Rp~yH~~p~~---gw~nDPnG~~~~~-G~YHlfyQ~~P~~~-------~~g~~~~Wgha~S~Dl-v~W~~~~~al~ 118 (587)
...|.+.--+.... ..+.||. ++... |+-+|||...|... .+. ..+..+..|+|. ..|.. |..|.
T Consensus 57 G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~-p~~l~ 133 (351)
T cd00260 57 GKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSS-PRDLT 133 (351)
T ss_pred CCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecC-CccCC
Confidence 35676654444432 3567898 77776 99999998877642 123 456678888776 89985 33344
Q ss_pred CCCc-cCCCCeE--eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCC
Q 007857 119 PSGP-YDINSCW--SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195 (587)
Q Consensus 119 P~~~-~d~~Gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP 195 (587)
+... .+-...+ .|+.++..+|++++.+.+....+.....+.+|+|.| ++|+... +.. + ......|
T Consensus 134 ~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~ 201 (351)
T cd00260 134 PSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GVN--D----AGGCSEC 201 (351)
T ss_pred ccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CCC--C----CCCCcCC
Confidence 4321 1111222 233455568998775544333344566678899876 8997532 111 1 1233467
Q ss_pred eEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEcc
Q 007857 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 196 ~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~ 235 (587)
.++-. .+|+.+|+..... .+...++.|.| ...|+...
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~ 239 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEAL 239 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCc
Confidence 76533 4788888765542 45667888876 58998653
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.017 Score=58.82 Aligned_cols=148 Identities=20% Similarity=0.218 Sum_probs=88.8
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 67 ~nDPnG~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
..||. +++ .+|+.||||........|. .....+.+|+| ..+|.... .|.+.......+...+.++...+|++++.
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 46787 555 4999999996665554444 44555599998 89999864 23332222223444555455568988774
Q ss_pred -EeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEE
Q 007857 145 -YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (587)
Q Consensus 145 -YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly 223 (587)
|.. ........+.+|+|+| ++|+... ++. + ....--|.++.. .+|+.+|++... . .+.+.++
T Consensus 125 ~~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~~~~~~-~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 125 YYHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIP--D----GQGECEPSIVEL-PDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEE--SSCEEEEEEEEESSTT----SSEEEEE--ECE--C----SEEEEEEEEEEE-TTSEEEEEEEEC-S-STEEEEE
T ss_pred Eeec--cccCcceEEEEeCCCC----ceeeccc--ccc--c----cCCcceeEEEEC-CCCcEEEEEEcc-C-CCcEEEE
Confidence 443 1234566788999987 8998742 221 0 112224453333 678888877553 1 2266777
Q ss_pred EeCC-CCCCEEc
Q 007857 224 WSWD-FIHWTKL 234 (587)
Q Consensus 224 ~S~D-l~~W~~~ 234 (587)
+|.| ..+|+..
T Consensus 188 ~S~D~G~TWs~~ 199 (275)
T PF13088_consen 188 RSTDGGRTWSPP 199 (275)
T ss_dssp EESSTTSS-EEE
T ss_pred EECCCCCcCCCc
Confidence 8876 8999874
|
... |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.047 Score=54.25 Aligned_cols=185 Identities=15% Similarity=0.244 Sum_probs=99.6
Q ss_pred ecCCCCCc--cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEE-c
Q 007857 60 FRPPQNWI--NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-L 136 (587)
Q Consensus 60 ~~p~~gw~--nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~-~ 136 (587)
..|..||. .||- ++++||+||+|....-.+..|| ...=.-+-+|.+..-| +..--+. +...+.+.. .
T Consensus 16 ~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~------sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFa 85 (271)
T PF03664_consen 16 AQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG------SMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFA 85 (271)
T ss_pred ccCCCCceeccCce-EEeECCEEEEEEEeccCCCccc------eEeeeccCCHHHhhcc--ccccCCc-ccccceEEEec
Confidence 34666885 6998 9999999999998764444444 3333345577765432 2111111 122333322 2
Q ss_pred cCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+.+..||.|.-.. ..-....+.|..+| ..|.. ..|++.....-.....-|..||-+ +..-||+.+..
T Consensus 86 Pk~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSa--pq~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D--- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSA--PQPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD--- 152 (271)
T ss_pred CCcEEEEEEecCC----CcceeecCCCCCCC--ccCCC--CcccccccccCCCCCceeeEEEec--CCceEEEEcCC---
Confidence 4677788887321 11123345676666 46876 356653211111245689887754 33445555432
Q ss_pred cceEEEEEeCC-CCCCEE----ccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 217 EGMAFVYWSWD-FIHWTK----LDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 217 ~G~~~ly~S~D-l~~W~~----~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.| .||+|.- +-+.-. ....+.+......+|.+++.++. | ..++.|++-..+
T Consensus 153 nG--kiYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiG 208 (271)
T PF03664_consen 153 NG--KIYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIG 208 (271)
T ss_pred CC--cEEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEec
Confidence 25 3898853 222210 00111122234478999999997 5 127777776543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.043 Score=56.42 Aligned_cols=142 Identities=14% Similarity=0.209 Sum_probs=79.4
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc---ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
-|. ++|+ +++|+|+||+. +...++|+|.. .|....+...+.......|..+-.+ +.+|+++||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~----------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWW----------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred cCE-EeeeccCCEEEEEEecC----------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 565 7765 59999999962 24589998865 5776544333222222234555666 556999999
Q ss_pred EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC--eEEEEEeeeeCCcce-E
Q 007857 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM-A 220 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g--~~~m~~g~~~~~~G~-~ 220 (587)
|+.+-+. .+..|-...+ .|-..-..++.....+....-|.-|.| ++ .+| +|+|++-+.....++ .
T Consensus 148 ff~~dnG----~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDNG----KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCCC----eEEEEecchh------hCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 9987542 3444433221 121111123321110111245677884 55 445 999999775421222 2
Q ss_pred EEEEeCCCC-CCEEc
Q 007857 221 FVYWSWDFI-HWTKL 234 (587)
Q Consensus 221 ~ly~S~Dl~-~W~~~ 234 (587)
.-++|+.|. .|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 336777765 78876
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.025 Score=58.96 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=47.8
Q ss_pred CeEeeeEEEccCCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 127 Gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
++.-|..+..++|+++|+|++.... ..-.+.+|+|++.- -.|++...|||+..+.+. ...--...+ ....+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCcccE-EECCCCC
Confidence 3566777777899999999865322 22356788887653 346665568988544321 001112233 3446788
Q ss_pred EEEEEe
Q 007857 206 WRVLVG 211 (587)
Q Consensus 206 ~~m~~g 211 (587)
||+++=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 888763
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.084 Score=53.67 Aligned_cols=144 Identities=17% Similarity=0.112 Sum_probs=79.6
Q ss_pred CEEEEEEEECCCCCCCCCCceEEEEEe--CCC-cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC---
Q 007857 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (587)
Q Consensus 78 G~YHlfyQ~~P~~~~~g~~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~--- 151 (587)
|+...++.. +...+ ........| +|. .+|.....+..+. .....+..++++.+.+|+++|||+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666655 33334 445555555 887 7899864434333 12245677777777799999999554321
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe-CCCCC
Q 007857 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS-WDFIH 230 (587)
Q Consensus 152 ~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S-~Dl~~ 230 (587)
........+|+|+| ++|.... .|...+........+.+- +-. .+|++++..-........+.++.| +..+.
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12222248899976 8999753 333221111122334432 223 478887763222222344556555 55789
Q ss_pred CEEcc
Q 007857 231 WTKLD 235 (587)
Q Consensus 231 W~~~~ 235 (587)
|+...
T Consensus 147 W~~~~ 151 (275)
T PF13088_consen 147 WSSGS 151 (275)
T ss_dssp EEEEE
T ss_pred eeccc
Confidence 98765
|
... |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.12 Score=54.00 Aligned_cols=117 Identities=17% Similarity=0.234 Sum_probs=69.0
Q ss_pred eeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 131 GSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
+..++..+|+++|||.-+... +...-++|+|+|+ +||+..+ ++|.+...++....-...++-. +++++
T Consensus 12 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~~--~aL~P~~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 12 PNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHLP--VALPPDEEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEEE--EEE-SSSGGGTTEEEEEEEEEE--TTCEE
T ss_pred CccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeCC--ceEcccccCCcCccCcceEEEE--CCEEE
Confidence 333444699999999876532 3455689999997 8999863 6665543222222223343333 45788
Q ss_pred EEEeeeeCC-cceEEEEEe-CCCCCCEEcc--ccCccC-C--CCCccccCeEEEec
Q 007857 208 VLVGGQIDN-EGMAFVYWS-WDFIHWTKLD--HPLYSV-Q--ETGMWECPDIFPVS 256 (587)
Q Consensus 208 m~~g~~~~~-~G~~~ly~S-~Dl~~W~~~~--~~~~~~-~--~~~~wECPdlf~l~ 256 (587)
|++.+.... .-...+..| +|..+|+... .|+... . ...-|-=|.+|...
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 888766532 333455666 8899999864 344432 1 22346666665444
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.48 E-value=6.7 Score=41.39 Aligned_cols=146 Identities=14% Similarity=0.141 Sum_probs=83.5
Q ss_pred CceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC----------CceeEEEEEecCC
Q 007857 96 KMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (587)
Q Consensus 96 ~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~~A~s~D~ 164 (587)
.+......|.| ..+|.... ++..... ....+..++.+.+.+|+++|||...... ....+.+.+|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 35577788887 58999853 3444332 2345788888886449999999875431 2345678889887
Q ss_pred CCCccceeeeecCCcEEcCC--CCCCCCCccCC--eEEeecCCCeEEEEEeeeeCC--cceEEEEEeCCCCCCEEccccC
Q 007857 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDP--TTAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 165 ~d~~l~~w~k~~~nPvi~~p--~~~~~~~fRDP--~V~w~~~~g~~~m~~g~~~~~--~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
| ++|.+. ..+.... ..+ ...++-| -+. . .+|++++.+-..... .-..++|..++.+.|+... ..
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~-~~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGE-GV 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECC-CC
Confidence 6 899753 2222111 111 1122333 222 2 378887766443321 2234455556689998643 22
Q ss_pred ccCCCCCccccCeEEEec
Q 007857 239 YSVQETGMWECPDIFPVS 256 (587)
Q Consensus 239 ~~~~~~~~wECPdlf~l~ 256 (587)
.. .....| |.+++++
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 133456 7789996
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.99 Score=47.39 Aligned_cols=143 Identities=19% Similarity=0.243 Sum_probs=69.9
Q ss_pred CCCcceEECCEEEEEE-EECCCCCCCCCCceEE--EEEeCC-CcccEeccCCCCCCCccCC-CCeE--eeeEEEccCCeE
Q 007857 69 DPNGPMYYKGVYHLFY-QYNPLGPLFGDKMIWA--HSVSYD-LINWIHLSHALCPSGPYDI-NSCW--SGSVTILPGDKP 141 (587)
Q Consensus 69 DPnG~~~~~G~YHlfy-Q~~P~~~~~g~~~~Wg--ha~S~D-lv~W~~~~~al~P~~~~d~-~Gv~--SGsav~~~dg~~ 141 (587)
.|- .+-.++..+|+. .|+... + ...|+ +++|+| .+.|.+... |..... .. .+.+ =||.|+.+||++
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~---~-~~~~~llLvks~~~g~~W~~~~~-l~~~~~-~~~~~figgGGSGV~m~dGTL 134 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA---G-ADDWGLLLVKSTDGGIKWGDTKS-LPSTSF-QSWKQFIGGGGSGVVMEDGTL 134 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS-----S-STTEEEEEEEEESSSSEE---EE--GGGS--EEEEEEEE-SEE-EE-TTS-E
T ss_pred eee-eeecceeEEEEEEEEeccc---c-ccccceeeeeccCCcceeeeccc-CCchhc-cccceeecCCCCceEEcCCCE
Confidence 454 334456666665 555322 3 33454 566665 468987422 211110 10 1211 244466679998
Q ss_pred EEEEeeecCCCc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceE
Q 007857 142 FILYTGIDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMA 220 (587)
Q Consensus 142 ~l~YTg~~~~~~-~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~ 220 (587)
++=-.+...+.. ..-.|.+|+|.+ .+|+-..+ + .....+||.|+.. ++|+-.|+.... .|+-
T Consensus 135 VFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg--~-------s~~gC~~psv~EW-e~gkLlM~~~c~---~g~r 197 (310)
T PF13859_consen 135 VFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG--M-------SPAGCSDPSVVEW-EDGKLLMMTACD---DGRR 197 (310)
T ss_dssp EEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS--
T ss_pred EEEEeeeccCccceEEEEEEECCCc----cceEeccc--c-------CCCCcceEEEEec-cCCeeEEEEecc---cceE
Confidence 876666555445 366788999865 79975321 1 1246789997744 478877775432 2544
Q ss_pred EEEEeCC-CCCCEEcc
Q 007857 221 FVYWSWD-FIHWTKLD 235 (587)
Q Consensus 221 ~ly~S~D-l~~W~~~~ 235 (587)
.+|+|.| ...|+..-
T Consensus 198 rVYeS~DmG~tWtea~ 213 (310)
T PF13859_consen 198 RVYESGDMGTTWTEAL 213 (310)
T ss_dssp -EEEESSTTSS-EE-T
T ss_pred EEEEEcccceehhhcc
Confidence 6999977 47899854
|
|
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.22 E-value=2.1 Score=47.72 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=76.5
Q ss_pred CCCCCccCCCcceEECCEEEEEEEECCCC-CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCC
Q 007857 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (587)
Q Consensus 62 p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~-~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg 139 (587)
|-.|=+--|+ ++|+||+|+|+|.--+.. ..|- +++=-..+.++ .=.|.+. +.+ |.. +.+++|...|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsDp-i~l-~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSDP-IKL-NGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCcccc-eec-CCc-----CccCCceeecCCC
Confidence 3344444576 889999999999543332 1222 33333333332 2256542 212 221 2578889999999
Q ss_pred eEEEEEeeecCC--CceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-
Q 007857 140 KPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (587)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~~A~s~D~~d~~l~~w~k~~~--nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~- 214 (587)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++-. +.+..--.-|. +.+ .+|.|||+++.+.
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~ 227 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGL 227 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCC
Confidence 999999987642 1111111222111 01111111 112211 10111223465 566 6888898886543
Q ss_pred CCcc-eEEEEEeCCCC
Q 007857 215 DNEG-MAFVYWSWDFI 229 (587)
Q Consensus 215 ~~~G-~~~ly~S~Dl~ 229 (587)
...| .+.+.||+.+.
T Consensus 228 t~~gh~~~vaRSKsid 243 (549)
T COG3507 228 TTYGHAIRVARSKSID 243 (549)
T ss_pred CccceeEEEEeccCCC
Confidence 3334 47788998774
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.91 E-value=1.8 Score=42.36 Aligned_cols=102 Identities=23% Similarity=0.378 Sum_probs=64.5
Q ss_pred ceEECCE-EEEEEEECCCCCCCCCCceEEEEEeCCCcccEec--cCCCC-CCCccCCCCeE--eeeEEEccCCeEEEEEe
Q 007857 73 PMYYKGV-YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL--SHALC-PSGPYDINSCW--SGSVTILPGDKPFILYT 146 (587)
Q Consensus 73 ~~~~~G~-YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~--~~al~-P~~~~d~~Gv~--SGsav~~~dg~~~l~YT 146 (587)
.++++|+ |+++-|-.|.-. | +.....|.-.+ .|+-. |+.|. |.-+|+..|.| -|.||+.++|++++-|.
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--g-nsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ys 211 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--G-NSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYS 211 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--C-CcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEe
Confidence 5667774 888889888643 4 56666665443 46654 44444 44467777755 68888888999999998
Q ss_pred eecCCCceeEEEEEe---cCCCCCccceeeeecCCcEEc
Q 007857 147 GIDASGQQVQNLAMP---ENLSDPLLKDWVKFSGNPVMT 182 (587)
Q Consensus 147 g~~~~~~~~q~~A~s---~D~~d~~l~~w~k~~~nPvi~ 182 (587)
+...+..--.++-+. .|.-|+ .+|+|.+ .||+.
T Consensus 212 asatd~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 212 ASATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred ccccccceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 764322222233332 333344 5899974 78884
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=87.24 E-value=18 Score=39.44 Aligned_cols=129 Identities=12% Similarity=0.185 Sum_probs=81.5
Q ss_pred CCEEEEEEEECCCC-CCCCC----CceEEEEEeCC----CcccEeccCCCCCCCccCC-------CCeEeeeEEEc-cCC
Q 007857 77 KGVYHLFYQYNPLG-PLFGD----KMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (587)
Q Consensus 77 ~G~YHlfyQ~~P~~-~~~g~----~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~-------~Gv~SGsav~~-~dg 139 (587)
+|+..|||.....+ ..-.. ...-|++.+.| +-.|+.+-+.+.||+.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873221 11010 23457777777 5678877777888865332 23458888886 589
Q ss_pred eEEEEEeeecCC--------------------------------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 007857 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (587)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (587)
+.||++.|+... ....++||...+.. ...|+-++ |+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~~--PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELLP--PLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEEE--EEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEeC--cceeccc--
Confidence 999999987531 01246788877642 25688764 9996532
Q ss_pred CCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 188 ~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
-.....=|.||.+ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1345556887766 899999998765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=85.06 E-value=25 Score=37.13 Aligned_cols=156 Identities=15% Similarity=0.162 Sum_probs=88.2
Q ss_pred CccCCCcceEECCEEEEEEEECCC-C---CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCe------EeeeEE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPL-G---PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSVT 134 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~-~---~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv------~SGsav 134 (587)
+.==|.+.|-.+|+-+|.|+..-. + ..|. ...=+.+.|+| ..+|+..+.++.+..+.- .|+ |.=++.
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~ 170 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAF 170 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccc
Confidence 444588899999999999986411 1 1233 22347899999 789999986666654211 121 222233
Q ss_pred EccCCeEEEEEeeecCCCceeEEEEEe-c-CCCCCc------cce--eeeec--CCcEEcCCCCCCCCCccCCeEEeecC
Q 007857 135 ILPGDKPFILYTGIDASGQQVQNLAMP-E-NLSDPL------LKD--WVKFS--GNPVMTPPNGVKDDMFRDPTTAWQAP 202 (587)
Q Consensus 135 ~~~dg~~~l~YTg~~~~~~~~q~~A~s-~-D~~d~~------l~~--w~k~~--~nPvi~~p~~~~~~~fRDP~V~w~~~ 202 (587)
...||-.|+|=|...+ .....||.. . +..|+. ... |.+.. ..||+..+.+ -..|.|.+.
T Consensus 171 ~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~vg-------ElSv~~~~~ 241 (316)
T PF13810_consen 171 VKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPVG-------ELSVRYNEY 241 (316)
T ss_pred cCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCcc-------ceEEEEeCC
Confidence 3346655666564432 223334432 1 111100 012 65422 1466644321 235677777
Q ss_pred CCeEEEEEeeeeCCcceEEEEEeCCCC-CCEEc
Q 007857 203 DGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 203 ~g~~~m~~g~~~~~~G~~~ly~S~Dl~-~W~~~ 234 (587)
.|+|+|+.... ..+.|.+.++++.. .|...
T Consensus 242 ~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 242 LGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 89999998653 33568888898887 58644
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=80.74 E-value=44 Score=33.81 Aligned_cols=70 Identities=20% Similarity=0.363 Sum_probs=41.4
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc---ccEeccCCCCCCCcc-CCCCeEeeeEEEccCCeEE
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPY-DINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~al~P~~~~-d~~Gv~SGsav~~~dg~~~ 142 (587)
-|. |+|+ +..|+|.|||.| ......+|+|.- -|....+ |..+..- ...|..+--+|- ++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~vI~-D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQWVIC-DDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeEEEe-cCCceE
Confidence 355 7776 789999999654 335667888865 3765332 4333211 122334444443 366789
Q ss_pred EEEeeec
Q 007857 143 ILYTGID 149 (587)
Q Consensus 143 l~YTg~~ 149 (587)
||+++-+
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 9998754
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.24 E-value=28 Score=38.83 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=57.7
Q ss_pred EccCCeEEEEEeeecC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 135 ILPGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 135 ~~~dg~~~l~YTg~~~---~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
+..+|++++||.-+.. .+...=+.|+|+|. +||+..+ +++.|...++.....--.+|-+ .++.+.|+-|
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~p--iaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHLP--IALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceECC--ceecCCCccccCCceeeeEEEe-CCcEEEEEcc
Confidence 3358999999986542 13334468999886 8998752 3554443333444444443333 4667777766
Q ss_pred eeeC---Ccc-eEEEEEeCCCCCCEE-ccccCcc
Q 007857 212 GQID---NEG-MAFVYWSWDFIHWTK-LDHPLYS 240 (587)
Q Consensus 212 ~~~~---~~G-~~~ly~S~Dl~~W~~-~~~~~~~ 240 (587)
...+ .+. .=.+..|+|..++++ .+.++..
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 5441 122 234667888778777 3555543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 587 | ||||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 0.0 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 0.0 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 0.0 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 0.0 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 0.0 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 0.0 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 0.0 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 0.0 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-125 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 1e-34 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 4e-34 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 3e-29 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 1e-26 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 2e-21 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 6e-16 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 8e-16 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 3e-15 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 4e-15 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 2e-09 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 2e-09 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 5e-09 |
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 723 bits (1868), Expect = 0.0
Identities = 316/539 (58%), Positives = 403/539 (74%), Gaps = 5/539 (0%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
IHL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L+
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIH 230
+WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++
Sbjct: 124 EWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVN 183
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W + D PL S TG WECPD +PV +N T G+DTSV V+HV+K + HD+Y +
Sbjct: 184 WKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTI 241
Query: 291 GTYDPQMDIFSPDTDFHGNSN--DLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348
GTY P + F P + DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS D
Sbjct: 242 GTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQAD 301
Query: 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGIT 408
DI+KGW+G+Q+ PRA+W+D++GKQL+QWPVEEIE LR QV++ +K L GS++E+ GI
Sbjct: 302 DIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIA 361
Query: 409 ASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKT 468
ASQ DV I F+L L+EAE+ D VDPQ LCN++ AS +G GPFGLL +A++DL E++
Sbjct: 362 ASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQS 421
Query: 469 AIFFRIFKGQ-NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIV 527
AIFFR+F+ Q +Y VLMCSD SRS+++ ++D T+YGAFVDIDP ++SLR+L+DHSI+
Sbjct: 422 AIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSII 481
Query: 528 ESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESFK 586
ESF A GKTCIT+R+YPK EAHLF FNNGTQ+V IS ++AW+M A+ ++S K
Sbjct: 482 ESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQSVK 540
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 685 bits (1768), Expect = 0.0
Identities = 318/543 (58%), Positives = 405/543 (74%), Gaps = 11/543 (2%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S D
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTD 59
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LINW A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSD
Sbjct: 60 LINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSD 119
Query: 167 PLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224
P L++W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y
Sbjct: 120 PYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYT 179
Query: 225 SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLF 281
S DF+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL
Sbjct: 180 SKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLD 239
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
KHDYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W N
Sbjct: 240 DTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTN 299
Query: 342 ESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGS 400
ES S +DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS
Sbjct: 300 ESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 401 IVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILA 460
+EV G+TA+Q DVE+ F++ +LE+A++ +P+W DPQ +C+ N S++ GPFGL++LA
Sbjct: 360 RLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLA 419
Query: 461 TEDLTEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVS 517
+++L E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+P H +S
Sbjct: 420 SKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLS 478
Query: 518 LRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
LR+L+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A
Sbjct: 479 LRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSA 538
Query: 578 RLS 580
++S
Sbjct: 539 QIS 541
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 662 bits (1709), Expect = 0.0
Identities = 230/533 (43%), Positives = 330/533 (61%), Gaps = 6/533 (1%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S T++HF+P ++W++DP+GP++YKG YH FYQYNP P++G+ W H+VS D
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGN-NTWGHTVSRD 69
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LI+W++L AL YD+ +SGS T LP + +LYTG+ ++ +LA P +LSD
Sbjct: 70 LIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSD 129
Query: 167 PLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226
PLL +WVK+ GNP+++ P GV FRD +T W +G WR+ +G + + G+A VY +
Sbjct: 130 PLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETK 189
Query: 227 DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286
DF + L+ L++V +TG+WEC D++PVS G G++TSV P VKHVLK S+ + D
Sbjct: 190 DFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRD 249
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +GTYD + ++PD LRYD+GK+YASKTF+D K RRV+WAW E DS
Sbjct: 250 YYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSE 309
Query: 347 QDDIDKGWSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVS 405
D +KGW+ VQT+PR + LD K+G ++ WPVEE+E+LR + G+GS+V +
Sbjct: 310 VADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLD 369
Query: 406 GITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLT 465
TA+Q+D+ +FE+ + + A+ +G GPFGLL+ ATE+L+
Sbjct: 370 VGTATQLDIIAEFEIDKEALEGTIEADM--GYNCTTSGGAAERGVLGPFGLLVSATENLS 427
Query: 466 EKTAIFFRIFKGQN-KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDH 524
E+T ++F I KG + + C D SRSS D+ K G V + K ++R LVDH
Sbjct: 428 EQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLD-GEKFTMRLLVDH 486
Query: 525 SIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
SIVESFA G++CIT+RVYP A+ A LF FNN T + + +SL W MN A
Sbjct: 487 SIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSA 539
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 544 bits (1403), Expect = 0.0
Identities = 132/558 (23%), Positives = 206/558 (36%), Gaps = 80/558 (14%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSGPYDINS--CWSGSVTILPGDKP----------FILYTGI---------- 148
AL G + +SGS + +YT
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 149 --DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM---FRDPTTAWQAPD 203
QQ Q++A D L + NPV+ P + FRDP W
Sbjct: 123 QTVQEDQQSQSIAYS---LDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDES 179
Query: 204 GRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG- 262
+W V I +Y S + W + + G+WECP + + ++
Sbjct: 180 QKWV--VVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNST 237
Query: 263 --VDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V TS LNPG S Y +G +D DT + GNS D+G
Sbjct: 238 KWVITSGLNPGGPPGTVGS-----GTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPD 292
Query: 320 FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQWP 377
FYA+ + + N V W N + W +PR + L G + LVQ P
Sbjct: 293 FYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
Query: 378 VEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQ 437
E ++ K+ + T V++ F
Sbjct: 353 QEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAK---------------- 396
Query: 438 QLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED 497
+ F + + A+ + TE+T + + K Q + L + HS ++
Sbjct: 397 -----------SKASTFAIALRASANFTEQTLVGYDFAKQQ---IFLDRT-HSGDVSFDE 441
Query: 498 LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAF 557
+ Y + D G V L VD S VE F +G+T +T +++P + H
Sbjct: 442 TFASVYHGPLTPD-STGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPS---SDAVHARLA 497
Query: 558 NNGTQSVVISSLNAWNMN 575
+ G + + + +
Sbjct: 498 STGG-TTEDVRADIYKIA 514
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 503 bits (1297), Expect = e-174
Identities = 129/553 (23%), Positives = 203/553 (36%), Gaps = 75/553 (13%)
Query: 45 QVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+++A N + YH WINDPNG +YKG +H+FYQ +P G +G M W H S
Sbjct: 30 EMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGP-MHWGHVSS 88
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI--------DASGQQVQ 156
D++NW PS + + +SGS I YTG QVQ
Sbjct: 89 TDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQ 148
Query: 157 NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
A+P+N ++ P D +RDP W + G +
Sbjct: 149 MTALPDNDE-----LTSATKQGMIIDCPTDKVDHHYRDPKVWKT--GDTWYMTFGVSSAD 201
Query: 217 E-GMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGV---DTSVLNPG 271
+ G +++ S D + W + M ECPD P+ S +
Sbjct: 202 KRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSK 261
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
+ ++ + Y++GT++P + F P+T+F +D G +YA ++F
Sbjct: 262 PSGFMNRNVS---NAGYMIGTWEPGGE-FKPETEFR------LWDCGHNYYAPQSFNV-- 309
Query: 331 KNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVS 390
R++++ W + D GW G T+PR I L G +V PV E+E LR +
Sbjct: 310 DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGLREDTLD 368
Query: 391 IHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGR 450
L ++ A V++E+ +L
Sbjct: 369 HGSVTLDMDG-EQIIADDAEAVEIEMTIDLAA--------------------------ST 401
Query: 451 FGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDID 510
GL I ATED T + + GQ VV+ R ++ D +
Sbjct: 402 AERAGLKIHATED-GAYTYVAYD---GQIGRVVV-----DRQAMANGDRGYRAAPLTDAE 452
Query: 511 PHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLN 570
GK+ LR VD VE + G +++ Y E + S+ + SL
Sbjct: 453 LASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYAS---EGPRAIKLVAESG-SLKVDSLK 508
Query: 571 AWNMNQARLSEEE 583
+M L E
Sbjct: 509 LHHMKSIGLELEH 521
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 475 bits (1223), Expect = e-163
Identities = 116/562 (20%), Positives = 213/562 (37%), Gaps = 101/562 (17%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S + Y SYHF P Q W+N+PNG + +HLF+Q+NP ++G+ + W H+ S D
Sbjct: 21 SQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGN-ICWGHATSTD 79
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPG----------DKPFILYTG-IDASGQQV 155
L++W H A+ + ++G+ P +TG +S Q
Sbjct: 80 LMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQD 136
Query: 156 QNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM-----FRDPTTAWQAPDGRWRVLV 210
Q LA + W KF GNP+++ D+ RDP + G W +++
Sbjct: 137 QRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVL 192
Query: 211 GGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDT 265
+ + S D I+WT + + WE PD+F + + GT
Sbjct: 193 AHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT----- 245
Query: 266 SVLNPGVKHVLKTSL-----FSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V+ + + G++D + P +++ + D G+
Sbjct: 246 ----EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPV-----DASTMWLDNGRD 296
Query: 320 FYASKTFFD--SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQ 375
F + ++ + ++ RR++ A N S W G+ + PR + L K G Q VQ
Sbjct: 297 FDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSLKKVGTQQHFVQ 354
Query: 376 WPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVD 435
P+ E++T+ + ++ + G + +S I + +DV + F
Sbjct: 355 QPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPDAGSV---------- 403
Query: 436 PQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLK 495
L + +E+T I + + D + S
Sbjct: 404 ------------------LSLAVRK--GASEQTVIKYTQSDAT------LSVDRTESGDI 437
Query: 496 E--DLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAH 553
+ A ++ D G VS+R LVD VE F +G+ I+ ++P + +
Sbjct: 438 SYDPAAGGVHTAKLEEDGT-GLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDS-SDGLA 495
Query: 554 LFAFNNGTQSVVISSLNAWNMN 575
L + V+ S++ +++
Sbjct: 496 LEVTGG---NAVLQSVDVRSVS 514
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 466 bits (1200), Expect = e-160
Identities = 109/555 (19%), Positives = 193/555 (34%), Gaps = 70/555 (12%)
Query: 46 VSAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSV 103
+S ++ HF P + W+NDPNG Y K ++HL++QYNP +G + W H+
Sbjct: 1 LSVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHAT 60
Query: 104 SYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID------------AS 151
S DL++W A+ P +D +SGS+ + + + ID
Sbjct: 61 SNDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP 118
Query: 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211
Q Q++A + + K+ NPV+ + + FRDP W +W ++V
Sbjct: 119 DNQTQDIAFSLDGG----YTFTKYENNPVIDVSS----NQFRDPKVFWHEDSNQWIMVVS 170
Query: 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGV-DTSVLNP 270
E ++ S + +W + S +ECP + V I + L
Sbjct: 171 KS--QEYKIQIFGSANLKNWVLNSN-FSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAI 227
Query: 271 GVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDS 329
L S + Y +G +D F PD +S D GK FYA +TF +
Sbjct: 228 NPGSPLGGS-----INQYFVGDFDG--FQFVPD-----DSQTRFVDIGKDFYAFQTFSE- 274
Query: 330 AKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL-------DKSGKQLVQWPVEEIE 382
++ + AWA+ W ++ R L + L+Q PV
Sbjct: 275 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 334
Query: 383 TLRGKQVSIHDKELGSGSIVEVS-GITASQVDVEIDFELPELEEAELFDPAWVDPQQLCN 441
++ + +L + ++ + + D I F++ L P L N
Sbjct: 335 INVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLN----VSPGKTHFDILIN 390
Query: 442 DKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKT 501
+ + G D ++ + R +D + L
Sbjct: 391 SQELNSSVDSIKIGF------DSSQSSFYIDRHIPNVEFPRKQFFTDKLAAYL------- 437
Query: 502 TYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGT 561
+D D SL +VD +I+E + G +T + +
Sbjct: 438 ---EPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHDIQIVTDTEE 494
Query: 562 QSVVISSLNAWNMNQ 576
+ S+ +N+
Sbjct: 495 PLFELESVIIRELNK 509
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 463 bits (1192), Expect = e-159
Identities = 110/552 (19%), Positives = 184/552 (33%), Gaps = 106/552 (19%)
Query: 58 YHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL 117
YH PP W+ +P P+ G Y L+Y ++ W H+ + D + + H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNN---GPGGWDHASTTDGVAFTHHGTVM 60
Query: 118 CPSGPYDINSCWSGSVTILPGDKPFILYTGI----------DASGQQVQNLAMPEN---- 163
+ WSGS + G Q Q L +
Sbjct: 61 PLRPDFP---VWSGSAVVDTA-NTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 164 ---LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMA 220
L DP++ + G TP + FRDP W G W ++G A
Sbjct: 117 FTALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYA 169
Query: 221 FVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280
Y S + WT + Y G ECPD+F ++ + VL S+
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWVLAASM 219
Query: 281 FSDKHDY-----YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF--FDSAKN 332
+ Y GT+D + F D + D+G +YA+ T+ D+ +
Sbjct: 220 DAYGIGLPMTYAYWTGTWDG--EQFHAD-----DLTPQWLDWGWDWYAAVTWPSIDAPET 272
Query: 333 RRVLWAWANESDSTQDDI----DKGWSGVQTVPRAIWLDK---SGKQLVQWPVEEIETLR 385
+R+ AW N D+ G++G ++ R + L + L+ PV +
Sbjct: 273 KRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYV 332
Query: 386 GKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNA 445
++ D+ + +++ +G ++E+D
Sbjct: 333 TATTTLPDRTVDGSAVLPWNG---RAYEIELDIAWDTATN-------------------- 369
Query: 446 SIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGA 505
G+ + + D T T I KY + D S L A
Sbjct: 370 --------VGISVGRSPDGTRHTNI--------GKYGADLYVDRGPSDLAGYSLAPYSRA 413
Query: 506 FVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVV 565
IDP V LR LVD VE F G T ++ +V+ E + + + +G
Sbjct: 414 AAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFA---EGDTGISLYTDGG-PAH 469
Query: 566 ISSLNAWNMNQA 577
+ + + QA
Sbjct: 470 FTGIVVREIGQA 481
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 413 bits (1065), Expect = e-140
Identities = 124/529 (23%), Positives = 215/529 (40%), Gaps = 109/529 (20%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
+ +YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHL 60
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPL 168
AL P + + +SGS + K F++YT + ++ Q + M EN
Sbjct: 61 PVALYPD--DETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN----- 112
Query: 169 LKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWD 227
D+VK+ GNPV++ P FRDP +G WR+++G D + G +Y S D
Sbjct: 113 GLDFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDD 170
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287
HW + ++ + T +CPD+ + G K +L S+ S
Sbjct: 171 LFHWK-YEGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVL 214
Query: 288 YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANE--SD 344
+ +G + + D+G FYA++TFF +R V+ W
Sbjct: 215 FSMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRT 263
Query: 345 STQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEV 404
+GW+GV ++PR ++++ +L PV+E+ LR ++V K S +
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAK-----SGTFL 316
Query: 405 SGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
+ + ++ +F I+ R G
Sbjct: 317 LDVKENSYEIVCEFS-------------------------GEIELRMG------------ 339
Query: 465 TEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDH 524
E + + + + D +RS + + + +R+ +D
Sbjct: 340 NESEEVVITKSRDE------LIVDTTRSGVSGGEVRKSTV------EDEATNRIRAFLDS 387
Query: 525 SIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSL-NAW 572
VE F + R++P EN ++ + + + + L N W
Sbjct: 388 CSVEFFFN-DSIAFSFRIHP----ENVYNILSVKSNQVKLEVFELENIW 431
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 391 bits (1006), Expect = e-129
Identities = 99/639 (15%), Positives = 190/639 (29%), Gaps = 144/639 (22%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+ + H P + I DP G++H+ + ++ G A + +
Sbjct: 19 NNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG--------IAGATT 70
Query: 105 YDLINWIHLSH----ALCPSGPYDINSCWSGS-VTILPGDKPFILYTGIDAS-------- 151
+L + S + P G D + + G+ + + + P +LYT +
Sbjct: 71 ANLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPY 130
Query: 152 --GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT-PPNGVKDDMFRDP------------- 195
G + Q+LA ++ + + K PV+ P V FR P
Sbjct: 131 TRGSETQSLA----VARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLS 186
Query: 196 ---------------TTAWQAPDGRWRVLVGGQI-DNEGMAFVY-----WSWDFIHWTKL 234
W + W V V G + F+Y + +F +W L
Sbjct: 187 LDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYL 246
Query: 235 DHPLYSVQETG-------------MWECPDIFPVSINGTIGVDTSVLN----PGVKHVLK 277
+ +E ++ ++ G V G +
Sbjct: 247 GEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIV 306
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA------ 330
+ S + G + +F + D+G YA+ A
Sbjct: 307 PQVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSM-AGFLDWGFSAYAAAGKVLPASSAVSK 365
Query: 331 -----KNRRVLWAWANESDSTQDD----IDKGWSGVQTVPRAIWL---------DKSGKQ 372
+R V + W Q D +GW+G +PR + + + ++
Sbjct: 366 TSGVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREE 425
Query: 373 LVQWPVEE-------IETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEE 425
V W V E + TL L + V Q + F +
Sbjct: 426 GVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSPSSK 485
Query: 426 AELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLM 485
+ + AS + G ILA E+TAI+++ +
Sbjct: 486 FFVLTAQL--------EFPASARSSPLQSGFEILA--SELERTAIYYQFSNES------L 529
Query: 486 CSDHSRSSLKEDLDK-----------TTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARG 534
D S++S + + + + L +VD+++VE +A G
Sbjct: 530 VVDRSQTSAAAPTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYAN-G 588
Query: 535 KTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWN 573
+ ++T +N + F+NG V +++
Sbjct: 589 RFALSTWARS--WYDNSTQIRFFHNGEGEVQFRNVSVSE 625
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 8e-10
Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 23/216 (10%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIWAHSVSYDLINWIHL 113
DP+ + G Y+++Y + D+ ++ S D W
Sbjct: 94 VRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEE 153
Query: 114 SHALC--PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
A+ G YD S ++ + + DK ++ Y + + + +D
Sbjct: 154 GPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP 212
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ-IDNEGMAFVYWS----W 226
W K + NGV +D + D + I +G ++Y+
Sbjct: 213 WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKGEQMG 272
Query: 227 DFIHWTKLDHPL---YSVQETGMWECPDIFPVSING 259
+ I + + G + P+S +G
Sbjct: 273 EAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSG 308
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 3e-08
Identities = 54/347 (15%), Positives = 98/347 (28%), Gaps = 112/347 (32%)
Query: 305 DFHGNSNDLRY---------DYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWS 355
DF + +Y + + K D K+ +L S D I
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS--IL------SKEEIDHIIMSKD 59
Query: 356 GVQTVPRAIW-LDKSGKQLVQ------------WPVEEIETLRGKQ--------VSIHDK 394
V R W L +++VQ + + I+T +Q + D+
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT-EQRQPSMMTRMYIEQRDR 118
Query: 395 ELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPF 454
+ ++ +V +L +A L +L KN I G G
Sbjct: 119 LYNDNQVF-------AKYNVSRLQPYLKLRQA-L--------LELRPAKNVLIDGVLG-S 161
Query: 455 GLLILATE---DLTEKTAIFFRIF---------------KGQNKYVVLMCSDHSRSSLKE 496
G +A + + + F+IF Q + + SRS
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 497 DLDKTTYGAFVDIDPHHGKVSLRSLV----------------DHSIVESFAARGKTCITT 540
++ + H + LR L+ + +F K +TT
Sbjct: 222 NIK---------LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272
Query: 541 RVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESFKL 587
R + F + + IS + + L+ +E L
Sbjct: 273 R---------FKQVTDFLSAATTTHISL----DHHSMTLTPDEVKSL 306
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 4e-08
Identities = 58/491 (11%), Positives = 127/491 (25%), Gaps = 142/491 (28%)
Query: 149 DASGQQVQNLAMPENLSDPLLKDW----VKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG 204
+ Q Q + D + ++ V+ +++ D +
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILS--KEEIDHIIMSKD-----AVS 62
Query: 205 RWRVLVG---GQIDNEGMAFV-------Y-WSWDFIHW----TKLDHPLYSVQETGMWEC 249
L + + FV Y + I + +Y Q ++
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 250 PDIFP-------------------------VSINGTIGVDTSVLNPGVKHVLKTSLFSDK 284
+F V I+G +G + + V + K
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV---ALDVCLSYKVQCK 179
Query: 285 HDYYV----LGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYAS--------KTFFDSAKN 332
D+ + L + SP+T L Y + S K S +
Sbjct: 180 MDFKIFWLNLKNCN------SPETVLE-MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 333 R-RVLWAWANESDS--TQDDIDKGWSGVQTVPRAIW--LDKSGKQLV----QWPVEEIET 383
R L + ++ + W + S K L+ + + +
Sbjct: 233 ELRRLLKSKPYENCLLVLLNV---QN------AKAWNAFNLSCKILLTTRFKQVTDFLSA 283
Query: 384 LRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDP------------ 431
+S+ + EV + +D +LP E +P
Sbjct: 284 ATTTHISLDHHSMTLTP-DEVKSLLLKYLDCRPQ-DLPR--EVLTTNPRRLSIIAESIRD 339
Query: 432 ---AWVDPQQLCNDKNASIQGRFGPFGLLILATEDLT---EKTAIF----------FRIF 475
W + + + DK +I L +L + ++ ++F +
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESS----LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395
Query: 476 KGQNKYVV---LMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVD-----H-SI 526
++ H S +++ ++T + L+ ++ H SI
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI------PSIYLELKVKLENEYALHRSI 449
Query: 527 VESFAARGKTC 537
V+ +
Sbjct: 450 VDHYNIPKTFD 460
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 82/568 (14%), Positives = 163/568 (28%), Gaps = 142/568 (25%)
Query: 30 QSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPL 89
Q + Y NQ VS QPYL + + + P +
Sbjct: 115 QRDRLYNDNQVFAKYNVSRL--QPYLKL------RQALLELR-PAKNVLID--------- 156
Query: 90 GPL-FGDKMIWAHSVSYDL---------INWIHLSHALCPSGPYDINSCWSGSVTILPGD 139
G L G K A V I W++L + P +
Sbjct: 157 GVLGSG-KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET--VLEMLQK--------- 204
Query: 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVK--FSGNPVMTPPNG--VKDDMFRDP 195
L ID + + + L ++ ++ P N V ++ ++
Sbjct: 205 ----LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY---ENCLLVLLNV-QNA 256
Query: 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPV 255
W A + ++L+ + + + + H + LDH ++ E +
Sbjct: 257 KA-WNAFNLSCKILLTTR--FKQVTDFLSAATTTHIS-LDHHSMTLTPD---EVKSLLLK 309
Query: 256 SINGTIGVDTSVLNPGVK--HVLKTSLFS-------DKHDYYVLGTYDPQMDIFSPDTDF 306
++ L V + + S+ + D + D I +
Sbjct: 310 YLD----CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN- 364
Query: 307 HGNSNDLRYDYGKFYASKTFFDSAK-NRRVLWA-WANESDSTQDDIDKGWSGVQTVPRAI 364
+ R + + F SA +L W + S +
Sbjct: 365 VLEPAEYRKMFDRLS---VFPPSAHIPTILLSLIWFDVIKSDVMVV-------------- 407
Query: 365 WLDKSGKQ--LVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPE 422
++K K + + P E +SI + ++ ++
Sbjct: 408 -VNKLHKYSLVEKQPKES-------TISIPS--------------------IYLELKVKL 439
Query: 423 LEEAELFDPAWVD----PQQLCNDKNASIQGRFGPFGLLI---LATEDLTEKTAIFFRIF 475
E L + VD P+ +D + F I L + E+ +F +F
Sbjct: 440 ENEYALHR-SIVDHYNIPKTFDSD-DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 476 KG----QNKYVVLMCSDHSRSSLKEDL-DKTTYGAFV-DIDPHHGKVSLRSLVDHSI-VE 528
+ K + ++ S+ L Y ++ D DP + ++ + +++D +E
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL-VNAILDFLPKIE 556
Query: 529 SFAARGK-TCITTRV--YPKVAVENEAH 553
K T + A+ EAH
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIFEEAH 584
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 5e-08
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 25/168 (14%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIWAHSVSYDLINWIHL 113
DP+ + Y+++Y + D+ ++ S D + W
Sbjct: 89 VRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQ 148
Query: 114 SHAL--CPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
A+ G YD S ++ V + K ++ Y + + + +D
Sbjct: 149 GIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGL 207
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219
W K + PV+ P D D R++V+ G D+ +
Sbjct: 208 WTK-TDKPVLEP---------SDTGEWEGDEDNRFKVVSKGDFDSHKV 245
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 6e-08
Identities = 45/317 (14%), Positives = 94/317 (29%), Gaps = 32/317 (10%)
Query: 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIW 99
P + DP+ + YH++Y + DK
Sbjct: 36 TPLKGDLAYEEGVIR-RDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEV 94
Query: 100 AHSVSYDLINWIHLSHALC--PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQN 157
H+ S D I W + A+ +G YD + ++ V +++Y + A
Sbjct: 95 WHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEVLRH-NGTYYLVYQTVKAPYLNRSL 153
Query: 158 LAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217
+ SD W K S P+++P + D R+ V G D+
Sbjct: 154 EHIAIAYSDSPFGPWTK-SDAPILSPE---------NDGVWDTDEDNRFLVKEKGSFDSH 203
Query: 218 GMAFVYWSW--DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHV 275
+ + + + + G E ++ + S NP
Sbjct: 204 KVHDPCLMFFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEYNPITNSG 263
Query: 276 LKTSLFSDKHDYYVLGTYDPQMD---IFSPD-TDFHGNSNDLRYDYGKFYASKTFFDSAK 331
+ +++ K + T D ++ D +F S+ +
Sbjct: 264 HEVAVWPYKGGMATMLTTDGPEKNTCQWAEDGINFDIMSHIKGAPEAVGFFRPESDSDDP 323
Query: 332 NRRVLWAWANESDSTQD 348
+ W +++ D++ +
Sbjct: 324 ISGIEWGLSHKYDASWN 340
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 7e-07
Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 25/188 (13%)
Query: 65 NWINDPNGPMYYKGVYHLFY--QYNPLGPLFGDKMIWAHSVSYDLINWIHLSH-ALCPSG 121
+ +P Y G + Y + N + ++ S D I++ + A P+
Sbjct: 48 SDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAK 106
Query: 122 PYDINSCWSGS-----VTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS 176
+ G + + +LYT + ++ +A KD ++
Sbjct: 107 DNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATS--------KDLKHWT 157
Query: 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI 229
+A + V +++ E + S + I
Sbjct: 158 KFGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLI 217
Query: 230 HWTKLDHP 237
W L
Sbjct: 218 DWDPLLDE 225
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 5e-06
Identities = 31/206 (15%), Positives = 51/206 (24%), Gaps = 29/206 (14%)
Query: 53 PYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIH 112
P + P + + + Y G + ++ + + S D INW
Sbjct: 43 PIIGRNPV-PKGARVFNS-AVVPYNGEFVGVFRIDHKN----TRPFLHFGRSKDGINWEI 96
Query: 113 LS----HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPL 168
P+ + + V + D +I + D +
Sbjct: 97 EPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYITFCTDDHGPTI------------GV 143
Query: 169 L--KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226
KD+ F P P +F R G F+ S
Sbjct: 144 GMTKDFKTFVRLPNAYVPFNRNGVLFPRKINGKYVMLNRP---SDNGHTPFGDIFLSESP 200
Query: 227 DFIHWTKLDHPLYSVQETGMWECPDI 252
D IHW + WE I
Sbjct: 201 DMIHWGN-HRFVLGRSSYNWWENLKI 225
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 39/232 (16%), Positives = 62/232 (26%), Gaps = 35/232 (15%)
Query: 75 YYKGVYHLFYQYNPLGPLFGDK---MIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131
+ G + P D +++ D +W + P WSG
Sbjct: 143 NWNGYQLVIGMMGV--PNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPVIQQ--WSG 198
Query: 132 SVTILPGDKPFILYTGIDASGQQ--VQNLA-----MPENLSDPLLKDW------VKFSGN 178
S T+ + YT +D S Q LA + + + F G+
Sbjct: 199 SATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGD 258
Query: 179 PVM--------TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ--IDNEGMAFVYWSWDF 228
G + RD +G ++ +N + W
Sbjct: 259 GYHYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLN 317
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTS---VLNPGVKHVLK 277
T D+ Q + D S N IG+ V NP V V
Sbjct: 318 YGGTNKDNLGDFFQILSNSDIKDRAKWS-NAAIGIIKLNDDVKNPSVAKVYS 368
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 11/165 (6%)
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL--SDPLLKDWVKFS 176
S ++ N ++ + L + +LY D SG + + S + +
Sbjct: 44 DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGT-HF-QRE 100
Query: 177 GNPVMTPPNGVKDDMF-----RDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
PV P N + ++ DP DG + ++ + V S + W
Sbjct: 101 KTPVFYPDNDSQKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDW 159
Query: 232 TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVL 276
TK + + + + + K+ +
Sbjct: 160 TKHGPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFM 204
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 38/250 (15%), Positives = 73/250 (29%), Gaps = 37/250 (14%)
Query: 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGD----KMIWAHSVSYDLINWIHLSHALCPSG 121
+ + +G Y G + +F P D M + + +W + S
Sbjct: 64 LQNADGTVANYHGYHIVFALAGD--PKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSD 121
Query: 122 PYDI--------NSCWSGSVTILPGDKPFILYTGIDASGQQVQNLA-----MPENLSDPL 168
+D WSGS T K + YT Q L + + S
Sbjct: 122 KFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLN 181
Query: 169 LKDWVK----FSGNPVM--------TPPNGVKDDM--FRDPTTAWQAPDGRWRVLVGGQI 214
+ F G+ N D RDP + ++ V
Sbjct: 182 INGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTG 240
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI-NGTIGVDTSVLNPGVK 273
+G ++ ++ K + + + + + NG +G+ + +K
Sbjct: 241 TEDGYQGEESLFNKAYYGK-STSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLK 299
Query: 274 HVLKTSLFSD 283
V+K + S+
Sbjct: 300 KVMKPLIASN 309
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 100.0 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.93 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.93 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.92 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.91 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.89 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.88 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.86 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.83 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.83 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.82 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.81 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.81 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.79 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.69 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.67 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.64 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.61 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.61 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.6 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.58 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.56 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.55 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.48 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.44 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.41 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.4 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.35 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.05 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.97 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.95 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.89 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.58 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.43 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.36 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.33 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.22 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.2 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.14 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.11 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 98.01 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 98.0 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.97 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.93 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.88 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.82 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.77 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.72 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.69 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.62 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.58 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.56 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.24 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.11 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 97.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 96.91 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 96.82 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 96.81 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 96.78 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.59 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.48 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.37 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.23 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.84 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 95.63 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 95.37 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 94.6 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 94.55 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 94.18 | |
| 4b1m_A | 185 | Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil | 93.37 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 93.08 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 92.89 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 92.66 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 92.23 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 92.03 | |
| 4azz_A | 172 | Levanase; hydrolase; 1.70A {Bacillus subtilis} | 90.73 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 90.66 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 90.43 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 89.61 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 88.19 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 86.57 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 85.74 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 85.0 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 81.66 | |
| 1w0p_A | 781 | Sialidase; hydrolase, neuraminidase, lectin; HET: | 81.34 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-122 Score=1013.44 Aligned_cols=523 Identities=44% Similarity=0.837 Sum_probs=456.8
Q ss_pred CCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEee
Q 007857 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131 (587)
Q Consensus 52 ~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SG 131 (587)
+.+||+|||+||.||||||||++|++|+|||||||||+++.|| +|+||||+|+|||||+++|+||.|+.++|++|||||
T Consensus 16 ~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg-~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~SG 94 (546)
T 3ugf_A 16 SWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWG-NNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSG 94 (546)
T ss_dssp HHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSC-SCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEEEE
T ss_pred hhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCC-CcEEEEEEcCCcCccccCCCCCCCCcccccCCcCcc
Confidence 5689999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred eEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 132 SVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 132 sav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
||++++||+++|||||+...+.|.|++|+|+|++|+.|++|+|++.||||.+|+++...+||||+|+|++++|+|||++|
T Consensus 95 Savv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~~g~w~MviG 174 (546)
T 3ugf_A 95 SATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIG 174 (546)
T ss_dssp EEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECSTTCEEEEEE
T ss_pred eEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECCCCEEEEEEE
Confidence 99887799999999999876789999999999999999999999889999887777778999999889877899999999
Q ss_pred eeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEE
Q 007857 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (587)
Q Consensus 212 ~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (587)
++.+..|++++|+|+||++|++.+.++......+||||||||+|+..+.+|++.|+++.+.||||+.|.+..+.++|++|
T Consensus 175 a~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~iG 254 (546)
T 3ugf_A 175 AKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIG 254 (546)
T ss_dssp EEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEEEE
T ss_pred EccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEEEe
Confidence 98877899999999999999999887665445679999999999976667899999988889999999987788999999
Q ss_pred eecCCCCeeccCCCCCCCCCceecccCCCcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEec-CC
Q 007857 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG 370 (587)
Q Consensus 292 ~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-dg 370 (587)
+||+++.+|+|+....+.+.+.++|+|.|||||||.++++|||||||||++|++..+..+.||+|+|||||||+|++ +|
T Consensus 255 ~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~~g 334 (546)
T 3ugf_A 255 TYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKTG 334 (546)
T ss_dssp EEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTTTS
T ss_pred eecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeCCC
Confidence 99998889998865444455678999999999999997679999999999999876677899999999999999974 45
Q ss_pred CeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCc-CCcccccc-ccccccc
Q 007857 371 KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAW-VDPQQLCN-DKNASIQ 448 (587)
Q Consensus 371 ~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 448 (587)
.+|+|+||+||++||.+...+.+..+.++..+.+.+..+.++||+++|++.. +.++..+ .+.+..|. ..+++.+
T Consensus 335 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~----~~l~~~~~~~~~~~c~~~~ga~~~ 410 (546)
T 3ugf_A 335 TNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDK----EALEGTIEADMGYNCTTSGGAAER 410 (546)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC---------------CCCGGGSCGGGSC
T ss_pred CEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEecc----cccccccccccccccccccCcccc
Confidence 5799999999999999988888888888888888888888999999998752 1122212 24556687 6688888
Q ss_pred CccccEEEEEEEeCCCCceEEEEEEEeeCC-CceEEEEeecCCCCCccCCCCcccceeEEEecCCCCeEEEEEEEeCceE
Q 007857 449 GRFGPFGLLILATEDLTEKTAIFFRIFKGQ-NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIV 527 (587)
Q Consensus 449 ~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~-~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~~~~~LrifvD~S~v 527 (587)
|+.++|||.|+++++++|+|.|+|++.+.. ++..+.+|+||+||++.++..++.+++++++ +.+++++||||||||||
T Consensus 411 g~~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~~~~~~~~~~~~v~v-~~~~~lsLRilvD~SiV 489 (546)
T 3ugf_A 411 GVLGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPV-LDGEKFTMRLLVDHSIV 489 (546)
T ss_dssp BTTBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSCSSSCCCEEEEECCC-CTTCCEEEEEEEETTEE
T ss_pred CcccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCCcCCcccccceEeec-CCCCcEEEEEEEeccee
Confidence 999999999999999999999999998642 3455678999999999888888878877665 34678999999999999
Q ss_pred EEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccccccc
Q 007857 528 ESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580 (587)
Q Consensus 528 EvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~~~ 580 (587)
|+|+|+||+|||+||||..+..+++++++|++|.+...+.+|++|+|+++.++
T Consensus 490 E~F~~~Gr~~iTsrvYP~~~~~~~~~l~~fnn~~~~~~~~sl~~W~m~~~~~~ 542 (546)
T 3ugf_A 490 ESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQ 542 (546)
T ss_dssp EEEETTTTEEEEEECCCSSSCGGGCEEEEEECCSSCCEEEEEEEEEECCCCCE
T ss_pred eeeccCCeEEEEEEecCCcccCCCcEEEEEeCCCCceEEEEEEEeccccccCc
Confidence 99999999999999999987556789999998865444559999999999765
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-116 Score=978.79 Aligned_cols=534 Identities=59% Similarity=1.134 Sum_probs=466.5
Q ss_pred CCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCC-ceEEEEEeCCCcccEeccCCCCCCCccCCCCe
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDK-MIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~-~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv 128 (587)
.+++|||+|||+||.||||||||++|++|+|||||||+|+++.|| + |+||||+|+|||||+++|+||.|+.++|++||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g-~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv 81 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFG-DVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSC 81 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCC-SCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCC-CccEEEEEECCCccceEECCeeccCCCccccCCE
Confidence 458899999999999999999999999999999999999999999 8 99999999999999999999999999999999
Q ss_pred EeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEE
Q 007857 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
|||||+++++|+++|||||.+....|.|++|+|+|++||+|++|+|++.||||.+|+++...+||||+|+|++++|+|||
T Consensus 82 ~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~m 161 (543)
T 1st8_A 82 WSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRI 161 (543)
T ss_dssp EEEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEE
T ss_pred EcceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEE
Confidence 99999886799999999996555689999999999999999999999889999877777779999999889867899999
Q ss_pred EEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeE
Q 007857 209 LVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (587)
Q Consensus 209 ~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (587)
++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+.+|.+++++|+++.+.||||++|. .+.++|
T Consensus 162 v~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y 239 (543)
T 1st8_A 162 VVGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWY 239 (543)
T ss_dssp EEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEE
T ss_pred EEEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEE
Confidence 999987778999999999999999998777655566899999999999888889999999877899999987 567899
Q ss_pred EEEeecCCCCeeccCCCCC--CCCCceecccCCCcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEE
Q 007857 289 VLGTYDPQMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL 366 (587)
Q Consensus 289 ~vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l 366 (587)
++|+||+++.+|+|+..+. +...++++|+|.|||||||.++++|||||||||++|++..++.+.||+|+|||||||+|
T Consensus 240 ~iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l 319 (543)
T 1st8_A 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWI 319 (543)
T ss_dssp EEEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEE
T ss_pred EEEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEE
Confidence 9999999877999876543 43445689999999999999975699999999999998766778999999999999999
Q ss_pred ecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCcCCccccccccccc
Q 007857 367 DKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNAS 446 (587)
Q Consensus 367 ~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (587)
+++|.+|+|+||+||++||.+...+.+..+..+..+.+.+..+.+++++++|++..+++++.+++.|++++..|...+++
T Consensus 320 ~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (543)
T 1st8_A 320 DRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGAS 399 (543)
T ss_dssp CTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSSCCHHHHHHHSCTT
T ss_pred EeCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeecccccccccccccccccccccccccc
Confidence 76785699999999999999887777766766666777777778899999999876666677777787777788888888
Q ss_pred ccCccccEEEEEEEeCCCCceEEEEEEEeeC-CCceEEEEeecCCCCCccCCCCcccceeEEEecCCCCeEEEEEEEeCc
Q 007857 447 IQGRFGPFGLLILATEDLTEKTAIFFRIFKG-QNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHS 525 (587)
Q Consensus 447 ~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~-~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~~~~~LrifvD~S 525 (587)
++++.++|||.++++++++|+|.|+|++.+. +++..+++++||+||+......++.+++.+++++.++.++||||||+|
T Consensus 400 ~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~~~~~~~~~~~~~LrI~vD~S 479 (543)
T 1st8_A 400 SRGALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHS 479 (543)
T ss_dssp SCCSSCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSCSSCCCCCEEEEECCCTTTSCEEEEEEEETT
T ss_pred ccccccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCccccccccccceEEEEeccCCeEEEEEEEeCC
Confidence 8888889999999999989999999998875 445556789999999876655555566666554456789999999999
Q ss_pred eEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccccccccccccc
Q 007857 526 IVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESFK 586 (587)
Q Consensus 526 ~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~~~~~~~~~ 586 (587)
|||||+||||.|||+||||.....+..+|+++++|.+.+++.++++|+|+++.+++.||.|
T Consensus 480 svEvF~n~G~~~~TsRvyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~l~~~~~~~~~~~~ 540 (543)
T 1st8_A 480 IIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQSVK 540 (543)
T ss_dssp EEEEEEGGGTEEEEEECCCSGGGTSCCEEEEEECSSSCEEEEEEEEEEECCCCEEECCC--
T ss_pred EEEEEECCCEEEEEEEeecCCccCCcceEEEEeCCCceEEEEEEEEEechhheechhhhhh
Confidence 9999999999999999999875334678888887766778889999999999999998865
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-116 Score=976.74 Aligned_cols=531 Identities=60% Similarity=1.099 Sum_probs=463.1
Q ss_pred CCCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCC
Q 007857 48 APANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127 (587)
Q Consensus 48 ~~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G 127 (587)
..++++|||+|||+||.||||||||++|++|+|||||||+|+++.|| +|+||||+|+|||||+++|+||.|+.++|++|
T Consensus 2 ~~~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G 80 (541)
T 2ac1_A 2 PSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWG-NIVWAHSTSTDLINWDPHPPAIFPSAPFDING 80 (541)
T ss_dssp ---CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSBEEEEEEECCCSGGGTTC
T ss_pred CCcCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCC-CcEEEEEECCCccceEECceeecCCCccccCC
Confidence 45678999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCCCCCccCCeEEeecCCCe
Q 007857 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p--~~~~~~~fRDP~V~w~~~~g~ 205 (587)
||||||+++++|+++|||||++....|.|++|+|+|++||+|++|+|++.||||.+| +++...+||||+|+|++++|+
T Consensus 81 ~~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~ 160 (541)
T 2ac1_A 81 CWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKK 160 (541)
T ss_dssp EEEEEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSC
T ss_pred EEcceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCe
Confidence 999999986699999999997655689999999999999999999999889999777 676778999999889866899
Q ss_pred EEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCC---ceeEEEEeeCC
Q 007857 206 WRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPG---VKHVLKTSLFS 282 (587)
Q Consensus 206 ~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~---~k~vl~~s~~~ 282 (587)
|||++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+.+|.+++++|++|.+ .||||..|.++
T Consensus 161 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~ 240 (541)
T 2ac1_A 161 WRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240 (541)
T ss_dssp EEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETT
T ss_pred EEEEEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecC
Confidence 999999988778999999999999999998777654556899999999999877788999998765 69999999888
Q ss_pred CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCCCcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeE
Q 007857 283 DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPR 362 (587)
Q Consensus 283 ~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPR 362 (587)
.+.++|++|+||+++.+|+|+..+.+...++++|+|.|||||||.++++|||||||||++|++..++.+.||+|+|||||
T Consensus 241 ~~~~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPR 320 (541)
T 2ac1_A 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPR 320 (541)
T ss_dssp TTEEEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCE
T ss_pred CcceEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCE
Confidence 88899999999998779999876554444579999999999999997569999999999998766667789999999999
Q ss_pred EEEEecCCCeEEEcchHHHHhhhcCce-eecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCcCCcccccc
Q 007857 363 AIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCN 441 (587)
Q Consensus 363 eL~l~~dg~~L~q~Pv~el~~Lr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (587)
||+|+++|.+|+|+||+||++||.+.. .+.+..+..+..+.+.+..+.+++++++|++..+++++.+++.|.+++..|.
T Consensus 321 el~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (541)
T 2ac1_A 321 KIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICS 400 (541)
T ss_dssp EEEECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTTCCCHHHHHH
T ss_pred EEEEEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEecccccccccccccccccccccc
Confidence 999976785699999999999999877 6666667666667777777788999999998766667778888888888898
Q ss_pred cccccccCccccEEEEEEEeCCCCceEEEEEEEeeC-C--CceEEEEeecCCCCCccCCCCcccceeEEEecCCCCeEEE
Q 007857 442 DKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKG-Q--NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSL 518 (587)
Q Consensus 442 ~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~-~--~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~~~~~L 518 (587)
..+++++++.++|||.++++++++|.|.|+|++.+. + ++..+++++||+||+......++.++..+++++ +++++|
T Consensus 401 ~~g~~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~~~~~~~-~~~~~L 479 (541)
T 2ac1_A 401 KMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSL 479 (541)
T ss_dssp HTCTTSCCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSCTTSCCCCEEEEECCCT-TSCEEE
T ss_pred ccccccccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCccccccccccceEEEecC-CCceEE
Confidence 888888998899999999999888999999998865 3 455566899999998766555555666665544 567999
Q ss_pred EEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccccccc
Q 007857 519 RSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580 (587)
Q Consensus 519 rifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~~~ 580 (587)
|||||+||||||+||||.|||+||||.....+..+|++|++|++.+++.++++|+|+++.++
T Consensus 480 ri~vD~S~vEvF~n~G~~~~Tsrvyp~~~~~~~~~~~~~~~g~~~~~~~~~~~w~l~~~~~~ 541 (541)
T 2ac1_A 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541 (541)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECSSSCEEEEEEEEEEBCCCCBC
T ss_pred EEEEeCCEEEEEECCCEEEEEEEeeCCCccCCcceEEEEeCCCceEEEEEEEEEecceeecC
Confidence 99999999999999999999999999875334678888887766788889999999998764
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-105 Score=878.82 Aligned_cols=465 Identities=28% Similarity=0.464 Sum_probs=380.1
Q ss_pred CCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCe
Q 007857 49 PANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (587)
Q Consensus 49 ~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv 128 (587)
..+++|||+|||+||.||||||||++|++|+|||||||||+++.|| +|+||||+|+|||||+++|+||.|+.++|.+||
T Consensus 34 ~~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg-~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~ 112 (526)
T 3pij_A 34 KRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWG-PMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGV 112 (526)
T ss_dssp TCCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSC-SBEEEEEEESSSSSEEECCCCBCCCBGGGTTEE
T ss_pred ccCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcC-CcEEEEEEeCCCCCceeCeeccCCCCccccCCe
Confidence 3568999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EeeeEEEccCCeEEEEEeeecC--------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee
Q 007857 129 WSGSVTILPGDKPFILYTGIDA--------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (587)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~--------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~ 200 (587)
|||||+++.||+++|+|||+.. .+.|.|++|+|+|+| |++|+|++ |||..|.+....+||||+| |+
T Consensus 113 ~SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P~~~~~~~fRDP~V-~~ 186 (526)
T 3pij_A 113 FSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCPTDKVDHHYRDPKV-WK 186 (526)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCCGGGEEEEEEEEEE-EE
T ss_pred EeceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCCCCccccccccCEE-EE
Confidence 9999999778899999999842 124899999999974 58999974 8887664445689999996 55
Q ss_pred cCCCeEEEEEeeee-CCcceEEEEEeCCCCCCEEccccCc-cCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEE
Q 007857 201 APDGRWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKT 278 (587)
Q Consensus 201 ~~~g~~~m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~-~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~ 278 (587)
++|+|||++|++. +..|++++|+|+||++|++.+.++. ....++||||||||+|+ |.+ .+.||||++
T Consensus 187 -~~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~~ 255 (526)
T 3pij_A 187 -TGDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIGF 255 (526)
T ss_dssp -ETTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEEE
T ss_pred -ECCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEEE
Confidence 5899999999876 5679999999999999999987433 23457899999999998 322 245999998
Q ss_pred eeCC----------CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCC
Q 007857 279 SLFS----------DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQ 347 (587)
Q Consensus 279 s~~~----------~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~ 347 (587)
|..+ .+.++|++|+||.. .+|+|+.. ++++|+|+ |||||||. + +|||||||||++|++..
T Consensus 256 s~~g~~~~~~~~~~~~~~~Y~vG~~d~~-~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~ 326 (526)
T 3pij_A 256 SAMGSKPSGFMNRNVSNAGYMIGTWEPG-GEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPI 326 (526)
T ss_dssp EEESCCCBTTBSCSSSEEEEEEEEECTT-SCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCC
T ss_pred eccccCCCccccccccceeEEEEEEcCC-CcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccC
Confidence 8632 35689999999942 48998753 57899999 99999998 4 79999999999999988
Q ss_pred CCCCCCcceeeeeeEEEEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCcccccc
Q 007857 348 DDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAE 427 (587)
Q Consensus 348 ~~~~~gW~g~ltlPReL~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 427 (587)
+..+.+|+|+|||||||+|+++| +|+|+|++||++||.+.+.+.+..+..+....+.. .+.+++|+++|++..
T Consensus 327 ~~~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~----- 399 (526)
T 3pij_A 327 PMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAA----- 399 (526)
T ss_dssp GGGGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTT-----
T ss_pred CCCCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECC-----
Confidence 88889999999999999998777 59999999999999988776666665443333332 345678888887641
Q ss_pred ccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEE
Q 007857 428 LFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV 507 (587)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~ 507 (587)
+..++|||.|++++++ |.|.|.|+.. .+.+ .+||++|+... ..++...
T Consensus 400 ---------------------~~~~~~gl~l~~~~~~-e~t~i~yd~~---~~~l---~~DR~~s~~~~----~~~~~~~ 447 (526)
T 3pij_A 400 ---------------------STAERAGLKIHATEDG-AYTYVAYDGQ---IGRV---VVDRQAMANGD----RGYRAAP 447 (526)
T ss_dssp ---------------------CCCSEEEEEEEECTTS-CCEEEEEETT---TTEE---EEECTTCSSSC----CCEEEEE
T ss_pred ---------------------CCcceEEEEEEECCCC-cEEEEEEEeC---CCEE---EEECCCCCCCC----CccceEE
Confidence 1113699999988775 8999999854 2443 46999997542 1222211
Q ss_pred E--ecCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeecccccccccc
Q 007857 508 D--IDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEE 583 (587)
Q Consensus 508 ~--~~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~~~~~~ 583 (587)
. +.+.++.++||||||+||||||+||||.|||+||||... ..+|.++++++ .+++.+|++|+|+++..++|.
T Consensus 448 ~~~~~~~~~~~~LrI~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~gg-~~~~~~l~~~~l~~~~~~~~~ 521 (526)
T 3pij_A 448 LTDAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYASEG---PRAIKLVAESG-SLKVDSLKLHHMKSIGLELEH 521 (526)
T ss_dssp CCHHHHHHSEEEEEEEECSSEEEEEETTTTEEEEEECCCCSS---CCEEEEEEESS-CEEEEEEEEEEBCCCSSSCSC
T ss_pred EeeecCCCCcEEEEEEEeCCEEEEEECCCeEEEEEEEcCCCC---CceEEEEEcCC-eEEEEEEEEEecccchhhhhh
Confidence 1 112246899999999999999999999999999999875 33555565553 678999999999999999885
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-102 Score=852.98 Aligned_cols=456 Identities=25% Similarity=0.462 Sum_probs=361.5
Q ss_pred CCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCe
Q 007857 49 PANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (587)
Q Consensus 49 ~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv 128 (587)
...++|||+|||+||.||||||||++|++|+|||||||||+++.|| +||||||+|+|||||+++|+|| | |.+||
T Consensus 23 ~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg-~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~ 96 (516)
T 3sc7_X 23 AQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWG-NICWGHATSTDLMHWAHKPTAI-A----DENGV 96 (516)
T ss_dssp -CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTC-CCEEEEEEESSSSSCEEEEEEE-C----CBTTE
T ss_pred hcCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccC-CCEEEEEEeCCCCcceecCccc-c----CCCCc
Confidence 3568899999999999999999999999999999999999999999 9999999999999999999999 4 34565
Q ss_pred --EeeeEEEccCC----------eEEEEEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCC----CC-CCC
Q 007857 129 --WSGSVTILPGD----------KPFILYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN----GV-KDD 190 (587)
Q Consensus 129 --~SGsav~~~dg----------~~~l~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~----~~-~~~ 190 (587)
|||||++++++ .++|||||+.. .+.|.|++|+|+|+| ++|+|+++||||.+++ ++ ...
T Consensus 97 ~~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~ 172 (516)
T 3sc7_X 97 EAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGL 172 (516)
T ss_dssp EEEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSS
T ss_pred eeEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCC
Confidence 99999997543 48999999864 467999999999975 8999998899996432 22 124
Q ss_pred CccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCC-----CCccccCeEEEeccCCccceee
Q 007857 191 MFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQE-----TGMWECPDIFPVSINGTIGVDT 265 (587)
Q Consensus 191 ~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~-----~~~wECPdlf~l~~~g~~g~~~ 265 (587)
+||||+|+|++++|+|||++|++ ..|++++|+|+||++|++.+.+...... ++||||||||+|+++|.
T Consensus 173 ~fRDPkV~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~----- 245 (516)
T 3sc7_X 173 ESRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT----- 245 (516)
T ss_dssp SCEEEEEEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS-----
T ss_pred cccCCeEEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC-----
Confidence 89999988876789999999874 3578999999999999999875443222 26999999999986552
Q ss_pred ccCCCCceeEEEEeeCC-----CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEec--CCCCcEEEE
Q 007857 266 SVLNPGVKHVLKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFD--SAKNRRVLW 337 (587)
Q Consensus 266 ~~~~~~~k~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d--~~~grri~~ 337 (587)
.+.||||++|.++ ...++|++|+||++ +|+++... ...+++|+|+ |||||||.+ .++||||+|
T Consensus 246 ----~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~---~~~~~lD~G~DfYA~qtf~~~~~~~gRri~w 316 (516)
T 3sc7_X 246 ----EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVD---ASTMWLDNGRDFDGALSWVNVPASDGRRIIA 316 (516)
T ss_dssp ----SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCC---TTTSBSCSSSSCEEEEECBSCCTTTCCCEEE
T ss_pred ----CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCC---ccceeEEcCCCccccccccCCcCCCCCEEEE
Confidence 1359999999854 24679999999986 78775421 1246799999 999999974 247999999
Q ss_pred EeccCCCCCCCCCCCCcceeeeeeEEEEEec-CC-CeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEE
Q 007857 338 AWANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG-KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVE 415 (587)
Q Consensus 338 gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-dg-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 415 (587)
|||++++.. .++.+|+|+|||||||+|++ +| .+|+|+||+||++||.+...+.+..+..+..+ +.++.+.++||+
T Consensus 317 ~w~~~~~~~--~pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~ 393 (516)
T 3sc7_X 317 AVMNSYGSN--PPTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVR 393 (516)
T ss_dssp EEECCSTTC--SSCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEE
T ss_pred EECCCccCC--CCCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEE
Confidence 999887653 34579999999999999985 33 37999999999999998766665555544322 444556778888
Q ss_pred EEEEcCccccccccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCcc
Q 007857 416 IDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLK 495 (587)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~ 495 (587)
++|+... ..+|||.+++++ +|+|.|.|+..+ +. +++||++|+..
T Consensus 394 ~~~~~~~----------------------------~~~fgl~l~~~~--~e~t~i~~d~~~---~~---l~~DR~~sg~~ 437 (516)
T 3sc7_X 394 VAFYPDA----------------------------GSVLSLAVRKGA--SEQTVIKYTQSD---AT---LSVDRTESGDI 437 (516)
T ss_dssp EEEEECT----------------------------TCEEEEEEEECS--SCCEEEEEETTT---TE---EEEECTTSSCC
T ss_pred EEEEcCC----------------------------CCEEEEEEecCC--CcEEEEEEEccC---CE---EEEecCCCCCc
Confidence 8886531 025899998875 688999998643 33 45799998743
Q ss_pred CCCCcccceeEEEecC---CCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEee
Q 007857 496 EDLDKTTYGAFVDIDP---HHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAW 572 (587)
Q Consensus 496 ~~~~~~~~~~~~~~~~---~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w 572 (587)
. ..+.++..+..++ .++.++||||||+||||||+||||.|||+||||... ..+|.++++| +++++.++++|
T Consensus 438 ~--~~~~~~~~~~~~l~~~~~~~~~Lri~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~g-G~~~~~~l~v~ 511 (516)
T 3sc7_X 438 S--YDPAAGGVHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDS---SDGLALEVTG-GNAVLQSVDVR 511 (516)
T ss_dssp C--SCTTSSSEEEEECCCCTTSCEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEE
T ss_pred c--ccCCcceEEEeeeccCCCCcEEEEEEEeCcEEEEEECCCEEEEEEEecCCCC---CCeEEEEEcC-CcEEEEEEEEE
Confidence 2 2233333333333 257899999999999999999999999999999875 4566666665 36889999999
Q ss_pred ecc
Q 007857 573 NMN 575 (587)
Q Consensus 573 ~~~ 575 (587)
+|+
T Consensus 512 ~l~ 514 (516)
T 3sc7_X 512 SVS 514 (516)
T ss_dssp EEC
T ss_pred Eee
Confidence 986
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-101 Score=853.34 Aligned_cols=467 Identities=26% Similarity=0.470 Sum_probs=372.3
Q ss_pred CCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC----CCCCccCC
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL----CPSGPYDI 125 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al----~P~~~~d~ 125 (587)
++++|||+|||+||.||||||||++|++|+|||||||||+++.|| +||||||+|+|||||+++|+|| .|+ +|.
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg-~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~ 79 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWG-NISWGHAISEDLTHWEEKPVALLARGFGS--DVT 79 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSCEEEEEEECCBTTTS--CCC
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCccEEECCceEecCCCCC--CCC
Confidence 568899999999999999999999999999999999999999999 9999999999999999999999 775 577
Q ss_pred CCeEeeeEEEccCC----------eEEEEEeeecCC------------CceeEEEEEecCCCCCccceeeee-cCCcEEc
Q 007857 126 NSCWSGSVTILPGD----------KPFILYTGIDAS------------GQQVQNLAMPENLSDPLLKDWVKF-SGNPVMT 182 (587)
Q Consensus 126 ~Gv~SGsav~~~dg----------~~~l~YTg~~~~------------~~~~q~~A~s~D~~d~~l~~w~k~-~~nPvi~ 182 (587)
+|||||||+++.+| +++|||||+... +.|.|++|+|+|++ ++|+|+ ++||||.
T Consensus 80 ~g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~ 155 (518)
T 1y4w_A 80 EMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIP 155 (518)
T ss_dssp BEEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBC
T ss_pred CceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEe
Confidence 89999999997554 899999998542 25899999999964 899998 7899997
Q ss_pred CCCC---CCCCCccCCeEEeecCCCeEEEE--EeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEecc
Q 007857 183 PPNG---VKDDMFRDPTTAWQAPDGRWRVL--VGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257 (587)
Q Consensus 183 ~p~~---~~~~~fRDP~V~w~~~~g~~~m~--~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~ 257 (587)
+++. ....+||||+|+|++++|+|||+ +|++ ..+++|+|+||++|++.+.+......++||||||||+|.+
T Consensus 156 ~~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~ 231 (518)
T 1y4w_A 156 NPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPL 231 (518)
T ss_dssp SCCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEB
T ss_pred cCCcccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeec
Confidence 6543 24689999998887668999999 6654 2589999999999999987554344578999999999965
Q ss_pred CCccceeeccCCCCceeEEEEeeCC-------CCeeeEEEEeecCCCCeeccCCCCC--CCCCceecccCC-CcccceEe
Q 007857 258 NGTIGVDTSVLNPGVKHVLKTSLFS-------DKHDYYVLGTYDPQMDIFSPDTDFH--GNSNDLRYDYGK-FYASKTFF 327 (587)
Q Consensus 258 ~g~~g~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~-fYA~qt~~ 327 (587)
+|. .+.||||++|.++ .+.++|++|+||++ +|+|+.... ....+++||+|+ |||||||.
T Consensus 232 ~g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~ 300 (518)
T 1y4w_A 232 DSG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYN 300 (518)
T ss_dssp TTS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECB
T ss_pred CCC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccc
Confidence 441 1349999999754 34789999999985 799875211 012367999998 99999999
Q ss_pred cCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEec-CC-CeEEEcchHHHHhhhcCceeecceeecCcceEEec
Q 007857 328 DSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG-KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVS 405 (587)
Q Consensus 328 d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-dg-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~ 405 (587)
+.++|||||||||++|++....++.+|+|+|||||||+|++ +| .+|+|+|++||++||.+...+.+..+..+....+.
T Consensus 301 d~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~ 380 (518)
T 1y4w_A 301 GLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNT 380 (518)
T ss_dssp SCCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCC
T ss_pred cCCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeec
Confidence 85589999999999998865556689999999999999985 33 37999999999999998765544444333233333
Q ss_pred CcccceeeEEEEEE-cCccccccccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEE
Q 007857 406 GITASQVDVEIDFE-LPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVL 484 (587)
Q Consensus 406 ~~~~~~~~le~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~ 484 (587)
+..+.+++|+++|+ .. ..+.|||.|+++++++|.|.|.|+..+ +.
T Consensus 381 ~~~~~~~el~~~~~~~~----------------------------~~~~~gl~l~~~~~~~e~~~i~~~~~~---~~--- 426 (518)
T 1y4w_A 381 TTTGETFKVDLSFSAKS----------------------------KASTFAIALRASANFTEQTLVGYDFAK---QQ--- 426 (518)
T ss_dssp EECCSSEEEEEEEETTC----------------------------SSSEEEEEEEECTTSSSCEEEEEETTT---TE---
T ss_pred CCCCeEEEEEEEEecCC----------------------------CCccEEEEEEcCCCCceeEEEEEEecC---CE---
Confidence 34455677777775 21 113699999998888899999998643 33
Q ss_pred EeecCCCCCccCCCCccccee--EEEe-cCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCc
Q 007857 485 MCSDHSRSSLKEDLDKTTYGA--FVDI-DPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGT 561 (587)
Q Consensus 485 ~~~Dr~~s~~~~~~~~~~~~~--~~~~-~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~ 561 (587)
+++||++|+... . ...++. ..++ ....+.++||||||+||||||+||||.|||+|+||... ..+|.+++++
T Consensus 427 l~~dr~~s~~~~-~-~~~~~~~~~~~~~~~~~~~~~lri~vD~SsvEvF~n~G~~~~T~rvyp~~~---~~~i~~~~~~- 500 (518)
T 1y4w_A 427 IFLDRTHSGDVS-F-DETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHARLASTG- 500 (518)
T ss_dssp EEEECTTSSCCT-T-CTTTSCEEEEECCCCTTSEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-
T ss_pred EEEecCCCCCCc-c-cCcccceEEEEeecCCCCeEEEEEEEeCCEEEEEECCCEEEEEEEecCCCC---CCEEEEEECC-
Confidence 467999997532 1 122222 2333 22356899999999999999999999999999999864 4567777765
Q ss_pred eeEEEeEEEeeeccccc
Q 007857 562 QSVVISSLNAWNMNQAR 578 (587)
Q Consensus 562 ~~~~v~~l~~w~~~~~~ 578 (587)
+.+++.++++|+|+++.
T Consensus 501 g~~~~~~~~~~~l~s~w 517 (518)
T 1y4w_A 501 GTTEDVRADIYKIASTW 517 (518)
T ss_dssp SCEEEEEEEEEEBCCCC
T ss_pred CeEEEEEEEEEeccccc
Confidence 46888899999999874
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-100 Score=834.82 Aligned_cols=464 Identities=22% Similarity=0.365 Sum_probs=364.2
Q ss_pred CCCCcccceeecCCCCCccCCCcceEE--CCEEEEEEEECCCCCCCCCC-ceEEEEEeCCCcccEeccCCCCCCCccCCC
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDK-MIWAHSVSYDLINWIHLSHALCPSGPYDIN 126 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~--~G~YHlfyQ~~P~~~~~g~~-~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~ 126 (587)
..+.|||+|||+||.||||||||++|+ +|+|||||||||+++.|| + ||||||+|+|||||+++|+||.|+. |.+
T Consensus 5 ~~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg-~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~ 81 (509)
T 3kf3_A 5 TSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWG-QPLYWGHATSNDLVHWDEHEIAIGPEH--DNE 81 (509)
T ss_dssp CHHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCC-SSBEEEEEEESSSSSCEECSCCBCCSS--TTC
T ss_pred ccccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCC-CcCEEEEEEccCCCCcEECcccccccc--cCC
Confidence 346899999999999999999999998 499999999999999999 6 9999999999999999999999986 788
Q ss_pred CeEeeeEEEccC-------------CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCcc
Q 007857 127 SCWSGSVTILPG-------------DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFR 193 (587)
Q Consensus 127 Gv~SGsav~~~d-------------g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fR 193 (587)
||||||||++.+ |+++|+|||+. ...|.|++|+|.|++ .+|+|++.||||..+ ..+||
T Consensus 82 G~~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~-~~~q~q~lA~S~D~g----~~~~k~~~nPVi~~~----~~~fR 152 (509)
T 3kf3_A 82 GIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDNQTQDIAFSLDGG----YTFTKYENNPVIDVS----SNQFR 152 (509)
T ss_dssp EEEEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEE-TTEEEEEEEEESSSS----SSCEECTTCCSBCCS----CSSCE
T ss_pred CEEeceEEEeCCccccccccccCCCCceEEEECCCC-CCCeeEEEEEECCCC----cceEEcCCCceEcCC----CCccc
Confidence 999999998632 57999999976 367999999999965 799999889999542 47999
Q ss_pred CCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCce
Q 007857 194 DPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVK 273 (587)
Q Consensus 194 DP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k 273 (587)
||+|+|++++|+|+|++|+. ..|++++|+|+||++|++.+.+.. +..++||||||||+|+.+| +.+.|
T Consensus 153 DPkVfw~~~~g~w~Mv~g~~--~~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~---------~~~~k 220 (509)
T 3kf3_A 153 DPKVFWHEDSNQWIMVVSKS--QEYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIEN---------SDKSK 220 (509)
T ss_dssp EEEEEEETTTTEEEEEEEEG--GGTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTT---------SSCEE
T ss_pred CCeEEEECCCCEEEEEEEEC--CCCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccC---------CCCce
Confidence 99988987789999999864 357899999999999999987665 5567799999999998654 12459
Q ss_pred eEEEEeeCC-----CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCC
Q 007857 274 HVLKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQ 347 (587)
Q Consensus 274 ~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~ 347 (587)
|||++|.++ ...++|++|+||+. +|+|+.. ..++||+|+ |||||||.+ ++|||||||||++|++..
T Consensus 221 ~vL~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~-----~~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~ 292 (509)
T 3kf3_A 221 WVMFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDS-----QTRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYAD 292 (509)
T ss_dssp EEEEEEECSCCTTSSCEEEEEEEEECSS--CEEESSC-----BCEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTT
T ss_pred EEEEEccCCCCCCCCCceEEEEEEEeCC--EEEecCc-----cceeeccCCcceeeceeeC-CCCCEEEEEecCCccccc
Confidence 999998753 35689999999985 8998753 246899999 999999955 589999999999999877
Q ss_pred CCCCCCcceeeeeeEEEEEecC--C-----CeEEEcchH-HHHhhhcCceeecceeecCcceEEec--CcccceeeEEEE
Q 007857 348 DDIDKGWSGVQTVPRAIWLDKS--G-----KQLVQWPVE-EIETLRGKQVSIHDKELGSGSIVEVS--GITASQVDVEID 417 (587)
Q Consensus 348 ~~~~~gW~g~ltlPReL~l~~d--g-----~~L~q~Pv~-el~~Lr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~le~~ 417 (587)
+.++.+|+|+|||||||+|++. | .+|+|+||+ ||++||.+.. +.+..+..+..+.+. +. ..++|++++
T Consensus 293 ~~p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~-~~~~el~~~ 370 (509)
T 3kf3_A 293 QVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGS-TGLFDFNIT 370 (509)
T ss_dssp TSSCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCC-CSEEEEEEE
T ss_pred CCCCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCC-CceEEEEEE
Confidence 6778999999999999999851 1 269999999 9999996544 555566555444333 22 236777777
Q ss_pred EEcCccccccccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCC
Q 007857 418 FELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED 497 (587)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~ 497 (587)
|+..... .+. ++....|+|.++.+.+.+|.|.|.||.. .+.+ .+||++|+..-
T Consensus 371 ~~~~~~~---~~~-----------------~~~~~~~~l~l~~~~~~~e~~~i~yd~~---~~~l---~~DR~~sg~~~- 423 (509)
T 3kf3_A 371 FKVLNLN---VSP-----------------GKTHFDILINSQELNSSVDSIKIGFDSS---QSSF---YIDRHIPNVEF- 423 (509)
T ss_dssp EEECSCC---CCG-----------------GGSEEEEEEEECCSSSCCCEEEEEEETT---TTEE---EEECCCTTCCC-
T ss_pred Eeccccc---ccc-----------------cccceeEEEEEEecCCCCcEEEEEEECC---CCEE---EEECCCCCCCc-
Confidence 7653100 000 0111357888877777788999999953 2443 45999997411
Q ss_pred CCcccceeEE--EecC-----CCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCce-eEEEeEE
Q 007857 498 LDKTTYGAFV--DIDP-----HHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQ-SVVISSL 569 (587)
Q Consensus 498 ~~~~~~~~~~--~~~~-----~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~-~~~v~~l 569 (587)
...+.+.... .+.+ ..+.++||||||+||||||+|||+.|||+||||..... -..|.+++++.+ .++|.++
T Consensus 424 ~~~~~~~~~~~~~~~p~~~~~~~~~~~L~i~vD~ssvEvF~ndG~~v~T~~iFP~~~~~-~~~l~~~s~~~g~~~~i~~~ 502 (509)
T 3kf3_A 424 PRKQFFTDKLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKY-PHDIQIVTDTEEPLFELESV 502 (509)
T ss_dssp TTGGGCCCEEEEECCCSEEETTEEEEEEEEEEETTEEEEEETTTTEEEEEECCCSTTCC-EEEEEEEECCSSCSEEEEEE
T ss_pred ccCccccceeEEeeccccccccCCeEEEEEEEeccEEEEEECCCEEEEEEEEcCCCCCC-CceEEEEEcCCCeEEEEEEE
Confidence 0111111221 1222 23579999999999999999999999999999987521 345666665334 4789999
Q ss_pred Eeeecc
Q 007857 570 NAWNMN 575 (587)
Q Consensus 570 ~~w~~~ 575 (587)
++.+|.
T Consensus 503 ~~~~l~ 508 (509)
T 3kf3_A 503 IIRELN 508 (509)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 998875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-100 Score=832.85 Aligned_cols=446 Identities=23% Similarity=0.386 Sum_probs=355.4
Q ss_pred ccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEE
Q 007857 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVT 134 (587)
Q Consensus 55 Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav 134 (587)
+|+|||+||.||||||||++|++|+|||||||||+++.|| + ||||+|+|||||+++|+||.|+. ..||||||||
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g-~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav 74 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPG-G--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAV 74 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCC-E--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCC-c--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEE
Confidence 5999999999999999999999999999999999999999 7 99999999999999999999975 5799999999
Q ss_pred EccCCe-------EEEEEeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCC------------cc
Q 007857 135 ILPGDK-------PFILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM------------FR 193 (587)
Q Consensus 135 ~~~dg~-------~~l~YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~------------fR 193 (587)
++++|+ ++|||||+.. .+.|.|++|+|+|+| ++|+|+ +||||.+|.. .+ ||
T Consensus 75 ~~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~---~~~~~~~~~~~~~~fR 146 (492)
T 4ffh_A 75 VDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDG---RAATTPAEIENAEWFR 146 (492)
T ss_dssp EETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTT---TTCCSHHHHHHHTCEE
T ss_pred EeCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCc---cccccccccccCCCCc
Confidence 976664 9999999864 367999999999964 899999 8999976543 35 99
Q ss_pred CCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCce
Q 007857 194 DPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVK 273 (587)
Q Consensus 194 DP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k 273 (587)
||+|+|.+++|+|||++ ++ .++++||+|+||++|++.+.+......++||||||||+|+.++ .+.|
T Consensus 147 DP~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k 212 (492)
T 4ffh_A 147 DPKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRH 212 (492)
T ss_dssp EEEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEE
T ss_pred CCEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCce
Confidence 99988776789999999 44 3689999999999999999765544456899999999999532 2359
Q ss_pred eEEEEeeCC-----CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEe--cCCCCcEEEEEeccCCCC
Q 007857 274 HVLKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFF--DSAKNRRVLWAWANESDS 345 (587)
Q Consensus 274 ~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~--d~~~grri~~gW~~~~~~ 345 (587)
|||++|.++ ...++|++|+||+ .+|+|+.. ..+++|+|+ |||||||. +.++|||||||||++|++
T Consensus 213 ~vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~ 285 (492)
T 4ffh_A 213 WVLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKY 285 (492)
T ss_dssp EEEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTT
T ss_pred EEEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCcc
Confidence 999999754 4568999999996 48998753 257999999 99999999 445899999999999986
Q ss_pred C---CCCC-CCCcceeeeeeEEEEEec-CCC--eEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEE
Q 007857 346 T---QDDI-DKGWSGVQTVPRAIWLDK-SGK--QLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDF 418 (587)
Q Consensus 346 ~---~~~~-~~gW~g~ltlPReL~l~~-dg~--~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~ 418 (587)
. .++. ..||+|+|||||||+|++ +|+ +|+|+|++||++||.+.+.+.+..+..+. .+ ...+..++|+++|
T Consensus 286 ~~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~--~~-~~~~~~~el~~~~ 362 (492)
T 4ffh_A 286 AARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSA--VL-PWNGRAYEIELDI 362 (492)
T ss_dssp CSSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEE--EC-SCCCSSEEEEEEE
T ss_pred ccccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCce--ee-cCCCceEEEEEEE
Confidence 4 2333 378999999999999984 243 79999999999999988776665554322 12 2234556777666
Q ss_pred EcCccccccccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCC
Q 007857 419 ELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDL 498 (587)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~ 498 (587)
+.. ....|||.|+.+++ +.+.|.||... +. +.+||++|+....
T Consensus 363 ~~~----------------------------~~~~~gl~l~~~~~--~~~~i~yd~~~---~~---l~ldR~~sg~~~~- 405 (492)
T 4ffh_A 363 AWD----------------------------TATNVGISVGRSPD--GTRHTNIGKYG---AD---LYVDRGPSDLAGY- 405 (492)
T ss_dssp EES----------------------------SCSEEEEEEEECTT--SSCCEEEEEET---TE---EEEECGGGCCTTS-
T ss_pred ccC----------------------------CccEEEEEEEECCC--CeEEEEEECcC---CE---EEEEccCCCCccc-
Confidence 532 01368999998776 45789998753 43 3469999875321
Q ss_pred Cccccee--EEEecCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccc
Q 007857 499 DKTTYGA--FVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576 (587)
Q Consensus 499 ~~~~~~~--~~~~~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~ 576 (587)
...+.. ..++.+.++.++||||||+|||||||||||.|||+||||... ..+|.++++| +.+++.++++|+|++
T Consensus 406 -~~~~~~~~~~~~~~~~~~~~L~I~vD~SsvEvFvndG~~v~T~rifp~~~---~~~i~~~a~g-g~~~~~~l~v~~l~~ 480 (492)
T 4ffh_A 406 -SLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEG---DTGISLYTDG-GPAHFTGIVVREIGQ 480 (492)
T ss_dssp -CCTTCCEEEEECCTTCCEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEEEECC
T ss_pred -cccCCceEEEEecCCCCcEEEEEEEeCCEEEEEECCCEEEEEEEEeCCCC---CCeEEEEEcC-CeEEEEEEEEEeCch
Confidence 111211 223333468899999999999999999999999999999875 4566666665 367899999999999
Q ss_pred cccc
Q 007857 577 ARLS 580 (587)
Q Consensus 577 ~~~~ 580 (587)
+-++
T Consensus 481 ~~~~ 484 (492)
T 4ffh_A 481 AILE 484 (492)
T ss_dssp C---
T ss_pred hhhh
Confidence 8765
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-97 Score=828.08 Aligned_cols=473 Identities=21% Similarity=0.293 Sum_probs=360.8
Q ss_pred ccccccCCCCCCCcccceeecCCCCCccCCCcceE--ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEec----c
Q 007857 41 LQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL----S 114 (587)
Q Consensus 41 ~~~~~~~~~~~~~~Rp~yH~~p~~gw~nDPnG~~~--~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~----~ 114 (587)
+..... ....++|||+|||+||.||||||||++| ++|+|||||||||+ | ||||+|+|||||+++ |
T Consensus 14 l~~~~~-~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g----WgHa~S~DLvhW~~~~~~~~ 84 (634)
T 3lig_A 14 LSTLPN-NTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G----IAGATTANLATYTDTSDNGS 84 (634)
T ss_dssp GGGSCT-TTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C----EEEEEESSSSCCEESCSTTC
T ss_pred HHHhhh-cccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c----eeEEEecCcCceeECcCCCC
Confidence 444333 5567899999999999999999999999 99999999999994 4 999999999999999 8
Q ss_pred CCCCCCCccCCCCeEeeeEEEc-cCCeEEEEEeeecC----------CCceeEEEEEecCCCCCccceeeeecCCcEEc-
Q 007857 115 HALCPSGPYDINSCWSGSVTIL-PGDKPFILYTGIDA----------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT- 182 (587)
Q Consensus 115 ~al~P~~~~d~~Gv~SGsav~~-~dg~~~l~YTg~~~----------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~- 182 (587)
+||.|+.++|++||||||||++ .+|+++|||||+.+ .+.|.|++|+|+|+| ++|+|++.||||.
T Consensus 85 ~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g----~~w~K~~~nPVi~~ 160 (634)
T 3lig_A 85 FLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGG----RRFDKLDQGPVIAD 160 (634)
T ss_dssp EEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGG----TEEEECSSSCSBCS
T ss_pred ceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCC----CEEEECCCCceEcC
Confidence 9999999999999999999874 27999999999853 246899999999864 8999998899996
Q ss_pred CCCCCCCCCccCCeEEe----------------------------ecCCCeEEEEEeeee-CCcceEEEEE--eCC---C
Q 007857 183 PPNGVKDDMFRDPTTAW----------------------------QAPDGRWRVLVGGQI-DNEGMAFVYW--SWD---F 228 (587)
Q Consensus 183 ~p~~~~~~~fRDP~V~w----------------------------~~~~g~~~m~~g~~~-~~~G~~~ly~--S~D---l 228 (587)
+|.+++..+||||||+| .+.+|+|||++|++. +..|+++||+ |+| |
T Consensus 161 ~p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l 240 (634)
T 3lig_A 161 HPFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEF 240 (634)
T ss_dssp SSTTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCC
T ss_pred CCcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCcccc
Confidence 45566778999999766 224789999999987 5678999999 777 9
Q ss_pred CCCEEccccCcc-------------CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC-----------CC
Q 007857 229 IHWTKLDHPLYS-------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-----------DK 284 (587)
Q Consensus 229 ~~W~~~~~~~~~-------------~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~-----------~~ 284 (587)
++|+|.+++... +..++||||||||+|+.+|.. .+..+|||++|.++ .+
T Consensus 241 ~~W~~~g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~ 313 (634)
T 3lig_A 241 QYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIH 313 (634)
T ss_dssp SCEEEEEEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEE
T ss_pred CCceEecccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCcccccccccc
Confidence 999999875421 234679999999999954310 01248999998743 13
Q ss_pred eeeEEEEee--cCC----CCeeccCCCCCCCCCceecccCC-CcccceEecCC----------C-CcEEEEEeccCCCCC
Q 007857 285 HDYYVLGTY--DPQ----MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA----------K-NRRVLWAWANESDST 346 (587)
Q Consensus 285 ~~~Y~vG~~--d~~----~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~----------~-grri~~gW~~~~~~~ 346 (587)
.+.|++|+| |++ +.+|+|+. +++||+|+ |||||||.++. + |||||||||++|++.
T Consensus 314 ~~~y~~G~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~ 386 (634)
T 3lig_A 314 DMLWAAGEVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYE 386 (634)
T ss_dssp EEEEEEEEEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTT
T ss_pred ccEEEEEEEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCccc
Confidence 578999999 443 45788764 57899999 99999999863 2 999999999999865
Q ss_pred ----CCCCCCCcceeeeeeEEEEEec-----CC----------------------CeEEEcchHHH-HhhhcCcee--ec
Q 007857 347 ----QDDIDKGWSGVQTVPRAIWLDK-----SG----------------------KQLVQWPVEEI-ETLRGKQVS--IH 392 (587)
Q Consensus 347 ----~~~~~~gW~g~ltlPReL~l~~-----dg----------------------~~L~q~Pv~el-~~Lr~~~~~--~~ 392 (587)
.++.+.||+|+|||||||+|++ +| .+|.|+|++|| ++||.+... ..
T Consensus 387 ~~~~~pt~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~ 466 (634)
T 3lig_A 387 QADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEE 466 (634)
T ss_dssp TCSSCCHHHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEEC
T ss_pred ccccCCCCCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeeccc
Confidence 3456789999999999999951 22 26999999999 889987643 22
Q ss_pred ceeecCcceEEe-cCcccceeeEEEEEEcCccccccccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEE
Q 007857 393 DKELGSGSIVEV-SGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIF 471 (587)
Q Consensus 393 ~~~~~~~~~~~~-~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~ 471 (587)
+..+.....+.+ .+..+..++|++++++.... ++....+||.|+++++ |.|.|.
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~El~~~i~~~~~~-----------------------~~~a~~~Gl~L~~s~~--e~T~I~ 521 (634)
T 3lig_A 467 DRTLQTAAVVPFAQSPSSKFFVLTAQLEFPASA-----------------------RSSPLQSGFEILASEL--ERTAIY 521 (634)
T ss_dssp CEEECSEEEEECSSCCSSSEEEEEEEEECCGGG-----------------------TTSCCEEEEEEEESSS--CCEEEE
T ss_pred ceeccccceecccccCCCcEEEEEEEEecCCCC-----------------------cCcccEEEEEEEeCCC--cEEEEE
Confidence 233332222222 12345677888777653100 0111368999998754 789999
Q ss_pred EEEeeCCCceEEEEeecCCCCCccC----CCC-cccceeEEEecCC------CCeEEEEEEEeCceEEEEcCCCceEEEE
Q 007857 472 FRIFKGQNKYVVLMCSDHSRSSLKE----DLD-KTTYGAFVDIDPH------HGKVSLRSLVDHSIVESFAARGKTCITT 540 (587)
Q Consensus 472 ~~~~~~~~~~~~~~~~Dr~~s~~~~----~~~-~~~~~~~~~~~~~------~~~~~LrifvD~S~vEvFvNdG~~~~T~ 540 (587)
||.. .+.+ .+||++|+... +.. .+..+..+.+++. .+.++||||||+||||||||| |.|||+
T Consensus 522 Yd~~---~~~l---~vDRs~Sg~~~~~~~~~~~~~e~g~~R~~~~~~~~~~~~e~l~LrIfVD~SSVEVFvNd-e~vmTs 594 (634)
T 3lig_A 522 YQFS---NESL---VVDRSQTSAAAPTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYANG-RFALST 594 (634)
T ss_dssp EETT---TTEE---EEECTTSCTTTTTCTTSCCCCEEEECCCCEEESSSSEEECCEEEEEEEETTEEEEEETT-TEEEEE
T ss_pred EECC---CCEE---EEECCCCCCcccccccccccccccceEEEeecCcccccCCceEEEEEEECCEEEEEECC-cEEEEE
Confidence 9953 3444 45999998532 111 1112222222222 378999999999999999998 999999
Q ss_pred EeecC-CccCCccEEEEEecCceeEEEeEEEeeecc
Q 007857 541 RVYPK-VAVENEAHLFAFNNGTQSVVISSLNAWNMN 575 (587)
Q Consensus 541 rvyp~-~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~ 575 (587)
||||. .. +.+|.++++|.+.+++.++++|+..
T Consensus 595 RIyP~~~~---s~gI~l~a~G~G~a~~~~l~vw~gl 627 (634)
T 3lig_A 595 WARSWYDN---STQIRFFHNGEGEVQFRNVSVSEGL 627 (634)
T ss_dssp ECCCCCTT---TTEEEEEEESSSCEEEEEEEEEECC
T ss_pred EecCCCCC---CCcEEEEECCCccEEEEEEEEecCc
Confidence 99998 54 5677777776346899999999843
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-92 Score=764.69 Aligned_cols=421 Identities=28% Similarity=0.517 Sum_probs=343.3
Q ss_pred CcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeee
Q 007857 53 PYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGS 132 (587)
Q Consensus 53 ~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGs 132 (587)
+|||+|||+||.||||||||++|++|+|||||||+|.++.|| +++||||+|+||+||+++|+||.|+.+ .+||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g-~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgs 77 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWG-NICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGS 77 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCC-SCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCC-CcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeE
Confidence 489999999999999999999999999999999999999999 999999999999999999999999876 67999999
Q ss_pred EEEccCCeEEEEEeeecC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 133 VTILPGDKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 133 av~~~dg~~~l~YTg~~~-----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
|++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|++.||||..+++....+||||+| |+ ++|+||
T Consensus 78 av~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~ 149 (432)
T 1w2t_A 78 AVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWR 149 (432)
T ss_dssp EEE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEE
T ss_pred EEE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEE
Confidence 998 59999999999864 24689999999996 6899988899996543333689999995 66 489999
Q ss_pred EEEeeee-CCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCee
Q 007857 208 VLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286 (587)
Q Consensus 208 m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~ 286 (587)
|++|++. +..|++.+|+|+||++|++.+.+..... ++|||||+||+++ | ||||++|.++...+
T Consensus 150 m~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~-g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~~ 213 (432)
T 1w2t_A 150 MVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDET-TKEIDCPDLVRIG--E-------------KDILIYSITSTNSV 213 (432)
T ss_dssp EEEEEEETTTEEEEEEEEESSSSSCEEEEEEEEETT-CSCCEEEEEEEET--T-------------EEEEEEEETTTTEE
T ss_pred EEEEEecCCCCcEEEEEECCCCCCceEccccccCCC-CCEEECCeEEEEC--C-------------EEEEEEeCCCCcce
Confidence 9999875 5578899999999999999987554433 6799999999998 6 99999999887889
Q ss_pred eEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCC--CCCCCCCCcceeeeeeEE
Q 007857 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS--TQDDIDKGWSGVQTVPRA 363 (587)
Q Consensus 287 ~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~--~~~~~~~gW~g~ltlPRe 363 (587)
.|++|+|| + ..|.++. ++++|+|+ |||||||.++ + ||||||||++|++ ..++.+.+|+|+||||||
T Consensus 214 ~Y~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~ 282 (432)
T 1w2t_A 214 LFSMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRE 282 (432)
T ss_dssp EEEEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEE
T ss_pred EEEEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEE
Confidence 99999999 5 4565532 67899999 9999999986 5 9999999999987 455557899999999999
Q ss_pred EEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCcCCcccccccc
Q 007857 364 IWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDK 443 (587)
Q Consensus 364 L~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (587)
|+|+ +| +|.|+|++||++||.+...+.+ .+ ...+.+..+.+++|+++++.
T Consensus 283 l~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~~~----------------------- 332 (432)
T 1w2t_A 283 LYVE-NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEFSG----------------------- 332 (432)
T ss_dssp EEEE-TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEEEE-----------------------
T ss_pred EEEe-CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEEec-----------------------
Confidence 9997 67 7999999999999998765433 22 13444444556666655431
Q ss_pred cccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEEecCC-CCeEEEEEEE
Q 007857 444 NASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPH-HGKVSLRSLV 522 (587)
Q Consensus 444 ~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~-~~~~~Lrifv 522 (587)
.|||.++.+ .+.|.|.|+ . +. +++||++++.. .+..+.+++. ++.++|||||
T Consensus 333 ---------~~~l~~~~~---~~~~~i~~~--~---~~---~~~dr~~~~~~-------~g~~~~~~~~~~~~~~l~i~v 385 (432)
T 1w2t_A 333 ---------EIELRMGNE---SEEVVITKS--R---DE---LIVDTTRSGVS-------GGEVRKSTVEDEATNRIRAFL 385 (432)
T ss_dssp ---------EEEEEEECS---SCEEEEEEE--T---TE---EEEECTTSSTT-------CCCEEEEECCCCSSEEEEEEE
T ss_pred ---------eEEEEEeCC---CCeEEEEEE--C---CE---EEEEcCCCCCC-------CCeEEEEEeCCCCeeEEEEEE
Confidence 378888532 367999998 2 33 45699888643 1222223332 3669999999
Q ss_pred eCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccccc
Q 007857 523 DHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQAR 578 (587)
Q Consensus 523 D~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~ 578 (587)
|+||||||+|||+ |||+|+||... ..+|.+++++ .++++|+|+++.
T Consensus 386 D~s~vEvF~n~G~-~~t~r~yp~~~---~~~i~~~~~~------~~~~~~~l~~~w 431 (432)
T 1w2t_A 386 DSCSVEFFFNDSI-AFSFRIHPENV---YNILSVKSNQ------VKLEVFELENIW 431 (432)
T ss_dssp ETTEEEEEETTTE-EEEEECCCSSC---CCEEEEEEEE------EEEEEEEECCSC
T ss_pred cCCEEEEEECCCE-EEEEEEeCCCC---CCeEEEEeCC------cEEEEEEchhhc
Confidence 9999999999999 99999999865 3455555432 246789999875
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=292.49 Aligned_cols=269 Identities=13% Similarity=0.129 Sum_probs=186.6
Q ss_pred ccCC-CcceE-ECCEEEEEEE-ECCCCCCCCCCceEEEEEeC----CCcccEeccCCCCCCCccCCCCeEeeeEEEccCC
Q 007857 67 INDP-NGPMY-YKGVYHLFYQ-YNPLGPLFGDKMIWAHSVSY----DLINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (587)
Q Consensus 67 ~nDP-nG~~~-~~G~YHlfyQ-~~P~~~~~g~~~~Wgha~S~----Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg 139 (587)
++|| +|.++ ++|.||+|++ ..|. ++ ..||.|..++ ||+||++.|+++.|+.++ .|||||||++..||
T Consensus 133 l~D~~~G~v~~~~G~~vvf~L~~dP~---~~-d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG 206 (571)
T 2yfr_A 133 VQDAKTGYVSNWNGYQLVIGMMGVPN---VN-DNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDG 206 (571)
T ss_dssp BBCTTTCCBCCBTTEEEEEEEEECTT---SC-CCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTS
T ss_pred EEecCCCcEEEecCceEEEEEccCCC---CC-CcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCC
Confidence 4788 88887 8999999999 6665 57 8999999998 779999999989886443 79999999985699
Q ss_pred eEEEEEeeecCC--CceeEEEEE-----e----cCCCCCccceeeeec-CCcEEcCCC--------------CCCCCCcc
Q 007857 140 KPFILYTGIDAS--GQQVQNLAM-----P----ENLSDPLLKDWVKFS-GNPVMTPPN--------------GVKDDMFR 193 (587)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~~A~-----s----~D~~d~~l~~w~k~~-~nPvi~~p~--------------~~~~~~fR 193 (587)
+++|||||+... +.+.|++|. + +|+ .+++|.. ..+|+.+++ +....+||
T Consensus 207 ~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dg-----v~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FR 281 (571)
T 2yfr_A 207 SIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDK-----ISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMR 281 (571)
T ss_dssp CEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTE-----EEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCE
T ss_pred EEEEEEeccccCCCCcccceEEEEEeeeeecccCCC-----cceecccCCCceecCCCcccccccccccccccCCcccCc
Confidence 999999997642 234566654 2 332 3455432 245564432 11568999
Q ss_pred CCeEEeecCCCeEEEEEeeeeCC------------------------------------------cceEEEEEeCCC---
Q 007857 194 DPTTAWQAPDGRWRVLVGGQIDN------------------------------------------EGMAFVYWSWDF--- 228 (587)
Q Consensus 194 DP~V~w~~~~g~~~m~~g~~~~~------------------------------------------~G~~~ly~S~Dl--- 228 (587)
||+ ||++++|+|||++|++... .|+|.||+|+|+
T Consensus 282 DP~-Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n 360 (571)
T 2yfr_A 282 DAH-VIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKN 360 (571)
T ss_dssp EEE-EEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTS
T ss_pred CCe-EEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCC
Confidence 999 5664469999999998532 489999999765
Q ss_pred -CCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCC-----------------eeeE-E
Q 007857 229 -IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK-----------------HDYY-V 289 (587)
Q Consensus 229 -~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~-----------------~~~Y-~ 289 (587)
.+|++.+++..+...+.|||||+||+++ | +|||++|..... ...| +
T Consensus 361 ~~~We~~~pL~~~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~ 425 (571)
T 2yfr_A 361 PSVAKVYSPLISAPMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGY 425 (571)
T ss_dssp CCEEEECCCSEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEE
T ss_pred cccceeccccccCCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEE
Confidence 6899987544332335699999999998 6 899998864311 2344 4
Q ss_pred EEe-ecCCCCeeccCCCCC---CC--CCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeE
Q 007857 290 LGT-YDPQMDIFSPDTDFH---GN--SNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPR 362 (587)
Q Consensus 290 vG~-~d~~~~~F~~~~~~~---~~--~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPR 362 (587)
+++ +. +.|.|-.... .. .....++ +. +||..+..+ .+++++++||.+.... ...+|.|.|+-+.
T Consensus 426 vSdsl~---GPy~plng~glVL~~~~P~~~~~~-tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~ 496 (571)
T 2yfr_A 426 VSDNLT---HGYVPLNESGVVLTASVPANWRTA-TYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSF 496 (571)
T ss_dssp EESSSS---SCCEETTTTSEEEECCSCTTSTTC-EEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEE
T ss_pred EeCCCC---CCCeeCCCCceeecCCCCCccccc-cceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcE
Confidence 543 33 3666521100 00 0011232 44 777766433 3578899999988653 3467999998888
Q ss_pred EEEEecCCC
Q 007857 363 AIWLDKSGK 371 (587)
Q Consensus 363 eL~l~~dg~ 371 (587)
.|.++.||.
T Consensus 497 ~vq~~~dgt 505 (571)
T 2yfr_A 497 LLQINPDNT 505 (571)
T ss_dssp EEEEETTTE
T ss_pred EEEEcCCCC
Confidence 888877774
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=272.55 Aligned_cols=269 Identities=14% Similarity=0.144 Sum_probs=185.1
Q ss_pred CCCcc------CCCcce-EECCEEEEEEEECCCCCCCCCCceEEEEEeC----CCcccEeccCCCCCC-------Ccc--
Q 007857 64 QNWIN------DPNGPM-YYKGVYHLFYQYNPLGPLFGDKMIWAHSVSY----DLINWIHLSHALCPS-------GPY-- 123 (587)
Q Consensus 64 ~gw~n------DPnG~~-~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~----Dlv~W~~~~~al~P~-------~~~-- 123 (587)
..|+- ||.|-+ .++|.+++||+..+... ++ ..||+|+.|+ ||+||++.++ |.|+ .++
T Consensus 55 ~~~VWDsWpl~d~~G~~~~~~g~~lif~L~~dp~~-~~-~~hi~~~ys~~g~~dl~~W~~~G~-vfp~~~~~~~~~~~~~ 131 (447)
T 1oyg_A 55 GLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKN-AD-DTSIYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILK 131 (447)
T ss_dssp TCEEEEEEEEECTTSSBCCBTTEEEEEEEEECTTC-TT-CCEEEEEEEETTCCSGGGCEEEEE-SCCTTHHHHTTCTTGG
T ss_pred CCcccccceEECCCCCEEEecCcEEEEEEcCCCCC-CC-ceEEEEEECcCCCcccCCccCCCe-ecCCCccccccccccC
Confidence 46655 566644 36788889998765433 56 8999999999 5699999998 5555 344
Q ss_pred CCCCeEeeeEEEccCCeEEEEEeeecCC--CceeEEEEE-----ecCCCCCccceeeeec-CCcEEcCCCC---------
Q 007857 124 DINSCWSGSVTILPGDKPFILYTGIDAS--GQQVQNLAM-----PENLSDPLLKDWVKFS-GNPVMTPPNG--------- 186 (587)
Q Consensus 124 d~~Gv~SGsav~~~dg~~~l~YTg~~~~--~~~~q~~A~-----s~D~~d~~l~~w~k~~-~nPvi~~p~~--------- 186 (587)
+..|||||||++..||+++|||||+... ..|++..|. ++|+ .+|++.+ .++|+.+++.
T Consensus 132 ~~~g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg-----v~~~~~~~~~~l~~~Dg~~Yq~~~q~~ 206 (447)
T 1oyg_A 132 DQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS-----LNINGVEDYKSIFDGDGKTYQNVQQFI 206 (447)
T ss_dssp GCCEEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC-----EEEEEEEEEEEEECCCSSSBCCHHHHH
T ss_pred CCCCEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC-----cceecccCCCceEcCCCcccccccccc
Confidence 3689999999985699999999998642 334444333 4443 4555533 3566654321
Q ss_pred -------CCCCCccCCeEEeecCCCeEEEEEeeeeCC------------------------------------------c
Q 007857 187 -------VKDDMFRDPTTAWQAPDGRWRVLVGGQIDN------------------------------------------E 217 (587)
Q Consensus 187 -------~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~------------------------------------------~ 217 (587)
.+..+||||+| |++ +|+|||++|++... .
T Consensus 207 ~~~~~~~~~~~~fRDP~V-f~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 1oyg_A 207 DEGNYSSGDNHTLRDPHY-VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELAN 284 (447)
T ss_dssp HHTGGGGTCCCCCEEEEE-EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCC
T ss_pred ccccccCCCccccCCCeE-EeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcC
Confidence 12479999995 653 79999999998632 3
Q ss_pred ceEEEE-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCC--------CeeeE
Q 007857 218 GMAFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD--------KHDYY 288 (587)
Q Consensus 218 G~~~ly-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~--------~~~~Y 288 (587)
|+|.|+ .|+||.+|++.++++.+.....+||||++|+++ | ||||++|.... ....|
T Consensus 285 G~Igl~~~s~Dl~~W~~~~pL~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy 349 (447)
T 1oyg_A 285 GALGMIELNDDYTLKKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIY 349 (447)
T ss_dssp EEEEEEEECTTSSEEEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEE
T ss_pred cEEEEEEcCCCCCCceEccccccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEE
Confidence 788877 699999999986443332335699999999998 6 99999986432 12578
Q ss_pred EEEe-ecCCCCeeccCCC--------CCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceee
Q 007857 289 VLGT-YDPQMDIFSPDTD--------FHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQ 358 (587)
Q Consensus 289 ~vG~-~d~~~~~F~~~~~--------~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~l 358 (587)
++|- -+.-.+.|.|-.. .+ ....++ +. +||..+. + .+++++++||.+.... ..|.|.|
T Consensus 350 ~~g~vsdsl~GPy~plngsGlVl~~~~p---~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~~-----~~~ggtl 417 (447)
T 1oyg_A 350 MLGYVSNSLTGPYKPLNKTGLVLKMDLD---PNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGFY-----ADKQSTF 417 (447)
T ss_dssp EEEEEESSTTCCCEEGGGTSEEEEECCC---TTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTSC-----SSCCCEE
T ss_pred EEEEEcCCCCCCCeeCCCCceeecCCCC---Cccccc-cceeEEEecC-C--CCeEEEEEEeCCCCcc-----cccceee
Confidence 6663 2222346765110 00 011344 55 8888877 5 3689999999987532 4699999
Q ss_pred eeeEEEEEecC
Q 007857 359 TVPRAIWLDKS 369 (587)
Q Consensus 359 tlPReL~l~~d 369 (587)
+-+..|.|+.|
T Consensus 418 ap~~~v~~~gd 428 (447)
T 1oyg_A 418 APSFLLNIKGK 428 (447)
T ss_dssp CBCEEEEEETT
T ss_pred cCcEEEEEcCC
Confidence 99999999744
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=238.02 Aligned_cols=193 Identities=16% Similarity=0.229 Sum_probs=146.6
Q ss_pred CCCCcccce-eecCCCC--------CccCCCcceEECCEEEEEEEECCC-------------CCCCCCCceEEEEEeCCC
Q 007857 50 ANQPYLTSY-HFRPPQN--------WINDPNGPMYYKGVYHLFYQYNPL-------------GPLFGDKMIWAHSVSYDL 107 (587)
Q Consensus 50 ~~~~~Rp~y-H~~p~~g--------w~nDPnG~~~~~G~YHlfyQ~~P~-------------~~~~g~~~~Wgha~S~Dl 107 (587)
.+++|||.| |++|+.| ++|||+|+++++|+||||||++|. ...|+ .++|+||+|+||
T Consensus 69 ~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~-~~~i~~A~S~Dl 147 (408)
T 3p2n_A 69 LGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWD-RCDIWYATSEDG 147 (408)
T ss_dssp CCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTT-TCEEEEEEESSS
T ss_pred cCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccc-cceEEEEEcCCC
Confidence 578999999 9999999 999999999999999999998762 12356 789999999999
Q ss_pred cccEeccCCCCCCC--ccCCCCeEeeeEEEccCCeEEEEEeeecCC---C-ceeEEEEEecCCCCCccceeeeecCCcEE
Q 007857 108 INWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFILYTGIDAS---G-QQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (587)
Q Consensus 108 v~W~~~~~al~P~~--~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~---~-~~~q~~A~s~D~~d~~l~~w~k~~~nPvi 181 (587)
+||++.+++|.|.. .||..++|+++++. .+|+++||||++... + ...+++|++.... +. |++. ++||+
T Consensus 148 v~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli 221 (408)
T 3p2n_A 148 WTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPIL 221 (408)
T ss_dssp SEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSB
T ss_pred CeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-Cccee
Confidence 99999999998864 78889999999987 599999999997421 1 3456666654321 25 9997 57888
Q ss_pred cCC------------------CCCCCCCccCCeEEeecCCCeEEEEEeeeeCC--------cceEEEEEeCCCC-CCEEc
Q 007857 182 TPP------------------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--------EGMAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 182 ~~p------------------~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~--------~G~~~ly~S~Dl~-~W~~~ 234 (587)
.+. ..++...+++|.|+. .+|+|||++.+.... .-++.+.+|+|+. .|+..
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~~--~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 299 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIP--YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKS 299 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEEE--ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEEC
Confidence 542 345556689999654 489999999876411 1357788999987 89986
Q ss_pred c-ccCccCCCCCccccCeEEEec
Q 007857 235 D-HPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 235 ~-~~~~~~~~~~~wECPdlf~l~ 256 (587)
. .|+.... .| |-+|+-+
T Consensus 300 ~~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 300 PYNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TTCCSCSSC----SS-CCEEEET
T ss_pred CCCCcccCC----CC-CeeEecC
Confidence 4 3554321 12 6666544
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=230.94 Aligned_cols=193 Identities=18% Similarity=0.306 Sum_probs=150.1
Q ss_pred CCCCcccceeecCCCC--------CccCCCcceEECCEEEEEEEECCCC-------------CCCCCCceEEEEEeCCCc
Q 007857 50 ANQPYLTSYHFRPPQN--------WINDPNGPMYYKGVYHLFYQYNPLG-------------PLFGDKMIWAHSVSYDLI 108 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~g--------w~nDPnG~~~~~G~YHlfyQ~~P~~-------------~~~g~~~~Wgha~S~Dlv 108 (587)
.+..++++||++|..| |+||||++++++|+||||||++|.. ..|+ .++|+||+|+||+
T Consensus 25 ~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~-~~~i~~a~S~DLv 103 (374)
T 3r4z_A 25 KGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWD-KTEVWHATSKDKI 103 (374)
T ss_dssp SCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTT-TCEEEEEEESSSS
T ss_pred CCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccC-ccEEEEEECCCCc
Confidence 4578999999999999 9999999999999999999998642 1367 8999999999999
Q ss_pred ccEeccCCCCCCC--ccCCCCeEeeeEEEccCCeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEc
Q 007857 109 NWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (587)
Q Consensus 109 ~W~~~~~al~P~~--~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~ 182 (587)
||++++++|.|.. .|+..|||+|+++. .+|+++||||+.... ..+.+++|+|+|.. ..|++. ++||+.
T Consensus 104 ~W~~~g~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~ 177 (374)
T 3r4z_A 104 TWKEIGPAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILS 177 (374)
T ss_dssp EEEEEEEEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CcEeCcccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeC
Confidence 9999999999864 78889999999987 599999999997542 34789999999863 589996 689996
Q ss_pred CCC------------------CCCCCCccCCeEEeecCCCeEEEEEeeeeCC-----cc---eEEEEEeCCCC-CCEEcc
Q 007857 183 PPN------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN-----EG---MAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 183 ~p~------------------~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~-----~G---~~~ly~S~Dl~-~W~~~~ 235 (587)
+.+ .++...++||+|+ + .+|+|||++++.... .+ ++.+.+|+++. .|+...
T Consensus 178 ~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~ 255 (374)
T 3r4z_A 178 PENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-F-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSE 255 (374)
T ss_dssp CCCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECT
T ss_pred CCcCCceeecCCceEEEecCCccccCccccceEE-E-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECC
Confidence 432 1234467999954 5 589999999876421 11 57788898754 698863
Q ss_pred -ccCccCCCCCccccCeEEEec
Q 007857 236 -HPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 236 -~~~~~~~~~~~wECPdlf~l~ 256 (587)
.|+.... . =|.+|+-+
T Consensus 256 ~~Pi~~~~----~-dp~V~~~~ 272 (374)
T 3r4z_A 256 YNPITNSG----H-EVAVWPYK 272 (374)
T ss_dssp TCCCCSSC----S-SCCEEEET
T ss_pred CCCEeCCC----C-CCceEEeC
Confidence 3554321 1 25666654
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=235.54 Aligned_cols=203 Identities=16% Similarity=0.217 Sum_probs=145.2
Q ss_pred cCCCCCc------cCCCc-ceEECCEEEEEEEECCCCC--CCCCCceE----EEEEeCC---------CcccEeccCCCC
Q 007857 61 RPPQNWI------NDPNG-PMYYKGVYHLFYQYNPLGP--LFGDKMIW----AHSVSYD---------LINWIHLSHALC 118 (587)
Q Consensus 61 ~p~~gw~------nDPnG-~~~~~G~YHlfyQ~~P~~~--~~g~~~~W----gha~S~D---------lv~W~~~~~al~ 118 (587)
+.+..|+ +||+| ++.++|.||+||+..|... .|+ ..|| ||+.|+| |+||++.+.+|.
T Consensus 66 ~~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~-drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~ 144 (493)
T 1w18_A 66 INPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFD-DRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFP 144 (493)
T ss_dssp SCTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGG-GCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSC
T ss_pred ccCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCcc-CCCccceeeeEEecCccccccccccCCceECCcccc
Confidence 4467774 57888 8889999999999988764 355 4454 5999999 899999999886
Q ss_pred CCCc--------cCCCCeEeeeEEEc--cCCeEEEEEeeecC----CC----ceeEEEEEec-----CCCCCccceeeee
Q 007857 119 PSGP--------YDINSCWSGSVTIL--PGDKPFILYTGIDA----SG----QQVQNLAMPE-----NLSDPLLKDWVKF 175 (587)
Q Consensus 119 P~~~--------~d~~Gv~SGsav~~--~dg~~~l~YTg~~~----~~----~~~q~~A~s~-----D~~d~~l~~w~k~ 175 (587)
++.. ++..++|||||++. .||+++||||++.. .+ ...|+||.+. +..+..+.+|+|.
T Consensus 145 ~g~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~ 224 (493)
T 1w18_A 145 DGASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH 224 (493)
T ss_dssp TTGGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC
Confidence 6532 45578999999985 69999999999753 11 1247776332 2111235678875
Q ss_pred cCCcEEcCCCC-C------CCCCccCCeEEeecC-CCeEEEEEeeeeC--------------------------------
Q 007857 176 SGNPVMTPPNG-V------KDDMFRDPTTAWQAP-DGRWRVLVGGQID-------------------------------- 215 (587)
Q Consensus 176 ~~nPvi~~p~~-~------~~~~fRDP~V~w~~~-~g~~~m~~g~~~~-------------------------------- 215 (587)
++|+.+++. + ...+||||+|+..++ +|+|||+++++..
T Consensus 225 --~~l~~~DG~~Yqt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 302 (493)
T 1w18_A 225 --TPLLQPDGVLYQNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSG 302 (493)
T ss_dssp --EEEECCCSSSBCCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTT
T ss_pred --CceeecCccccccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhccccc
Confidence 567754321 1 247999999655433 4999999998651
Q ss_pred ---CcceEEEEE--eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 216 ---NEGMAFVYW--SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 216 ---~~G~~~ly~--S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
..|+|.|.+ |+||.+|++..+++....-..++|||++|+++ | ||+|++|..
T Consensus 303 a~~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G-------------kyYLFtSs~ 358 (493)
T 1w18_A 303 AYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G-------------KYYIFTISH 358 (493)
T ss_dssp GGGCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred chhccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------EEEEEEEcc
Confidence 146775555 56899999886544443345699999999998 7 999998853
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=225.09 Aligned_cols=188 Identities=18% Similarity=0.218 Sum_probs=146.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEec-cCCCCCC--CccCCCCe-EeeeEEEccCCe
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL-SHALCPS--GPYDINSC-WSGSVTILPGDK 140 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~-~~al~P~--~~~d~~Gv-~SGsav~~~dg~ 140 (587)
|..| +|+++++|+||||||+++. ++ .++|+||+|+|++||++. +++|.|+ ..++..|| |+++++. .+|+
T Consensus 55 gv~n--~~~i~~~g~~~lfY~~~~~---~~-~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~-~~d~ 127 (338)
T 1vkd_A 55 RVFN--SAVVPYNGEFVGVFRIDHK---NT-RPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDT 127 (338)
T ss_dssp EEEE--EEEEEETTEEEEEEEEEET---TS-CEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTE
T ss_pred eEEc--cEEEEECCEEEEEEEEECC---CC-cEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEE-ECCE
Confidence 4444 4789999999999999985 45 799999999999999997 5788888 67888999 8999988 4899
Q ss_pred EEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecC-CCeEEEEEeeee---CC
Q 007857 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP-DGRWRVLVGGQI---DN 216 (587)
Q Consensus 141 ~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~-~g~~~m~~g~~~---~~ 216 (587)
++|+||+ .. ..+.|++|.|+|+ ++|+|.. +++ . .+.|||. +|.+. +|+|+|+++.+. ..
T Consensus 128 yym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~~--~i~-~------~~~rd~~-~fp~~i~Gky~m~~~~q~~~~~~ 190 (338)
T 1vkd_A 128 YYITFCT-DD-HGPTIGVGMTKDF-----KTFVRLP--NAY-V------PFNRNGV-LFPRKINGKYVMLNRPSDNGHTP 190 (338)
T ss_dssp EEEEEEE-ES-SSEEEEEEEESSS-----SSEEEEC--CSS-S------SSEEEEE-ECSSCBTTBEEEEEEECCSSSCS
T ss_pred EEEEEEE-cC-CcceEEEEEECCC-----CeEEECC--ccC-C------CcCCceE-EEEEEECCEEEEEEEecCCCCCC
Confidence 9999999 64 5688999999987 8999863 343 1 1468997 66643 899999998764 35
Q ss_pred cceEEEEEeCCCCCCEEccccCccCCCCCccc------cCeEEEeccCCccceeeccCCCCceeEEEEeeCC--CCeeeE
Q 007857 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE------CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS--DKHDYY 288 (587)
Q Consensus 217 ~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wE------CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~--~~~~~Y 288 (587)
.|.+.+++|+||.+|+..+. +.....++||| ||+.|+++ + .|+|+++... .....|
T Consensus 191 ~~~I~~a~S~Dl~~W~~~~~-l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~Y 254 (338)
T 1vkd_A 191 FGDIFLSESPDMIHWGNHRF-VLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYVY 254 (338)
T ss_dssp CCCEEEEEESSSSCBEEEEE-EECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEEE
T ss_pred CcEEEEEEcCCcccCCcCce-EEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcEE
Confidence 67899999999999997764 43333344999 79999997 3 5887765321 124568
Q ss_pred EEEe
Q 007857 289 VLGT 292 (587)
Q Consensus 289 ~vG~ 292 (587)
.+|-
T Consensus 255 ~~G~ 258 (338)
T 1vkd_A 255 SFGA 258 (338)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-24 Score=226.91 Aligned_cols=193 Identities=17% Similarity=0.287 Sum_probs=147.7
Q ss_pred CCCCcccceeecCCCC-------Cc-cCCCcceEECCEEEEEEEECCCCC-------------CCCCCceEEEEEeCCCc
Q 007857 50 ANQPYLTSYHFRPPQN-------WI-NDPNGPMYYKGVYHLFYQYNPLGP-------------LFGDKMIWAHSVSYDLI 108 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~g-------w~-nDPnG~~~~~G~YHlfyQ~~P~~~-------------~~g~~~~Wgha~S~Dlv 108 (587)
....++++||..|..| |+ |||||+++++|+||||||++|... .|+ .++|+||+|+||+
T Consensus 65 ~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~-~~~i~~a~S~Dlv 143 (404)
T 4ak5_A 65 HDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWD-RCDIWYATSKDGL 143 (404)
T ss_dssp CCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTT-TCEEEEEEESSSS
T ss_pred CCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccC-ccEEEEEECCCCC
Confidence 4578888998777776 87 999999999999999999998411 367 8999999999999
Q ss_pred ccEeccCCCCCC--CccCCCCeEeeeEEEccCCeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEc
Q 007857 109 NWIHLSHALCPS--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (587)
Q Consensus 109 ~W~~~~~al~P~--~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~ 182 (587)
||++++.+|.|. ..|+..+||+++++. .+|+++|+||+.... ..+.+++|+|++.. -.|++. ++|||.
T Consensus 144 ~W~~~g~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~ 217 (404)
T 4ak5_A 144 TWKEQGIAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLE 217 (404)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CceeCceEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceec
Confidence 999999999985 478889999999987 599999999997542 34678999998642 269985 689996
Q ss_pred CCC------------------CCCCCCccCCeEEeecCCCeEEEEEeeeeCC--------cceEEEEEeCCCC-CCEEcc
Q 007857 183 PPN------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--------EGMAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 183 ~p~------------------~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~--------~G~~~ly~S~Dl~-~W~~~~ 235 (587)
+.+ .++...++||.|+ + .+|+|||++.+.... .-++.+..|+|+. .|+...
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 295 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSE 295 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECC
Confidence 432 1234567899965 4 489999999876411 1257889999987 798763
Q ss_pred -ccCccCCCCCccccCeEEEec
Q 007857 236 -HPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 236 -~~~~~~~~~~~wECPdlf~l~ 256 (587)
.|+.... .|| .+|+-+
T Consensus 296 ~nPv~~~~----~e~-~Vw~~~ 312 (404)
T 4ak5_A 296 YNPISNSG----HEV-CVWPYK 312 (404)
T ss_dssp TCCSCSSC----SSC-CEEEET
T ss_pred CCceecCC----Ccc-eEEEeC
Confidence 3554321 354 555544
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=210.27 Aligned_cols=189 Identities=15% Similarity=0.202 Sum_probs=145.1
Q ss_pred CCccCCCcceEEC--CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--ccCCCCeEeeeEEEcc---
Q 007857 65 NWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTILP--- 137 (587)
Q Consensus 65 gw~nDPnG~~~~~--G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~d~~Gv~SGsav~~~--- 137 (587)
||.+||+ +++.+ |+||||+++.++ +.|+ .++|.|++|+||+||+..+.+|.+.. .++..++|+++++..+
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~-~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~ 89 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWG-GSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDG 89 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGC-CCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETT
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCC-CcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecC
Confidence 7889999 99987 999999998765 5577 78999999999999999999998764 5666799999998742
Q ss_pred CCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecC-CCeEEEEEeeeeC
Q 007857 138 GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP-DGRWRVLVGGQID 215 (587)
Q Consensus 138 dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~-~g~~~m~~g~~~~ 215 (587)
+|+++|+||+.... ..+.+++|+|+|.. -.|++. ++||+...+. ...++|||.|++. + +|++||++|+
T Consensus 90 ~Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~~-~~p~~~~~~~-g~~~~iDp~vf~d-d~dG~~yl~~g~--- 159 (311)
T 3qz4_A 90 KYKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTDL-GKPIITSSPT-GRGQQIDVDVFTD-PVSGKSYLYWGN--- 159 (311)
T ss_dssp EEEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEEC-SSCSBCSCTT-SSSBSCCCEEEEC-TTTCCEEEEECB---
T ss_pred CCEEEEEEEeccCCCCCeeEEEEEECCCC----CCceEC-CcceEcCCCC-CCcccccccEEEE-CCCCcEEEEEcC---
Confidence 89999999997542 35788999998863 379884 6788854321 1357899996544 5 8999999986
Q ss_pred CcceEEEEE-eCCCCCCEEccccCccCC-----CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCC
Q 007857 216 NEGMAFVYW-SWDFIHWTKLDHPLYSVQ-----ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD 283 (587)
Q Consensus 216 ~~G~~~ly~-S~Dl~~W~~~~~~~~~~~-----~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~ 283 (587)
|.+.+.+ |+|+.+|......+.... ...+.|||.+|+.+ | +++|++|....
T Consensus 160 --~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 --GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDDT 216 (311)
T ss_dssp --SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESCT
T ss_pred --CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCCC
Confidence 3355666 788888864322222221 12479999999997 6 89999997543
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=206.08 Aligned_cols=149 Identities=17% Similarity=0.271 Sum_probs=115.8
Q ss_pred cceEECCEEEEEEEECCCCCC---CCCCceEEEEEeCCCcccEec-cCCCCCCCccCC-----CCeEeeeEEEccCCeEE
Q 007857 72 GPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHL-SHALCPSGPYDI-----NSCWSGSVTILPGDKPF 142 (587)
Q Consensus 72 G~~~~~G~YHlfyQ~~P~~~~---~g~~~~Wgha~S~Dlv~W~~~-~~al~P~~~~d~-----~Gv~SGsav~~~dg~~~ 142 (587)
|+++++|+||||||+++.... ++ .++||||+|+|++||++. .++|.|+..+++ .||++++++..+||+++
T Consensus 57 ~ai~~dGky~LfY~~~~~~~~~~~~~-~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG~yy 135 (364)
T 3qc2_A 57 AATLYNGEIVVLYRAEDKSGVGIGHR-TSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDGLYV 135 (364)
T ss_dssp EEEEETTEEEEEEEEECSSSSSTTCS-CEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEE
T ss_pred eEEEECCEEEEEEEEECCCCcccCCC-ceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCCEEE
Confidence 378899999999999998654 35 899999999999999995 478999887664 79999999885589999
Q ss_pred EEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCCCCCccCCeEE--------e-ecCCCeEEEEEe
Q 007857 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTA--------W-QAPDGRWRVLVG 211 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p--~~~~~~~fRDP~V~--------w-~~~~g~~~m~~g 211 (587)
|+||+... ..+.|++|+|+|+ ++|+|.. +++.+. ..+.....+|+.++ + ...+|+|+|+++
T Consensus 136 m~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~g--~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M~~g 207 (364)
T 3qc2_A 136 MMYTQWNR-HVPRLAVATSRNL-----KDWTKHG--PAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWG 207 (364)
T ss_dssp EEEEEECS-SCEEEEEEEESSS-----SSCEEEE--ETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEEEEC
T ss_pred EEEEecCC-CCeEEEEEEECCC-----CEEEEee--eccCccccccccccccccceeeeeccccceeeEEECCEEEEEEc
Confidence 99999763 5688999999997 8999973 555331 01112244666532 1 125899999986
Q ss_pred eeeCCcceEEEEEeCCCCCCEEc
Q 007857 212 GQIDNEGMAFVYWSWDFIHWTKL 234 (587)
Q Consensus 212 ~~~~~~G~~~ly~S~Dl~~W~~~ 234 (587)
. +.+.+++|+||++|+..
T Consensus 208 ~-----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 208 E-----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp S-----SSBEEEEESSSSSEEEC
T ss_pred C-----CeEEEEeCCCcccceEc
Confidence 2 56789999999999873
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=198.43 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=146.7
Q ss_pred CccCCCcceEECCEEEEEEEECCCC---CCCCCCceEEEEEeCCCcccEeccCCCCCC-CccCCCCeEeeeEEEccCCeE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLG---PLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKP 141 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~---~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~-~~~d~~Gv~SGsav~~~dg~~ 141 (587)
+.+||+ ++.++|+||||+++.+.. +.++ ...|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|++
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~~~~~~~~~-~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 11 FTADPA-ALVHKGRVYLYAGRDEAPDNTTFFV-MNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp EEEEEE-EEEETTEEEEEEEEECCSSSSSCCC-EEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred ccCCCc-eEEECCEEEEEEccCcccCCccccc-cCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 569999 556899999999988763 4566 6889999999999999999988864 456667899999987 69999
Q ss_pred EEEEeeecCC--CceeEEEEEecCCCCCccceeeeecCCcEEcCC-C--CCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 142 FILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-N--GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 142 ~l~YTg~~~~--~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~--~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+||||+.... ..+.+++|+|++.. -.|++..++|++... . .....+++||.|+ .+++|++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf-~DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSVF-IDDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEEE-ECTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCceE-ECCCCCEEEEEeCC---
Confidence 9999997643 24788999998753 379985467888531 1 1112468999965 44689999999874
Q ss_pred cceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEe
Q 007857 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (587)
Q Consensus 217 ~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (587)
+..++--|+|+.+|......+. ....++|||.+|+.+ | +++|++|....+...|...+
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s~ 217 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMGK 217 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEES
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEECC
Confidence 2222334789998864322222 245689999999987 6 89999998655556666553
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=185.06 Aligned_cols=183 Identities=14% Similarity=0.094 Sum_probs=133.4
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC-------CCCeEeeeEEEccC
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD-------INSCWSGSVTILPG 138 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d-------~~Gv~SGsav~~~d 138 (587)
+++||+ +++++|+||||++..+. ..+|.+++|+||+||+.++.+|.+...|+ ..++|+++++. .+
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~------~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~ 82 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE------ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YN 82 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT------SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ET
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC------CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-EC
Confidence 468999 66689999999998652 35799999999999999999998875543 36899999987 59
Q ss_pred CeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 139 DKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 139 g~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
|+++|+||+.... ..+.+++|+|+|... -.|++. .++|..++. ...+++||.|++. ++|++||++|+..
T Consensus 83 G~yylyyt~~~~~~~~~~i~va~s~~p~~---Gpw~~~--~~~l~~~~~-~~~~~iDp~vf~d-~dG~~Yl~~g~~~--- 152 (293)
T 1uv4_A 83 GKYWLYYSVSSFGSNTSAIGLASSTSISS---GGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFW--- 152 (293)
T ss_dssp TEEEEEEEECCTTCSCEEEEEEEESCTTT---TCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBST---
T ss_pred CEEEEEEEecCCCCCcceEEEEECCCCCC---CCCccC--CccEecCCC-CCCCCCCCCeEEC-CCCCEEEEEEecC---
Confidence 9999999986542 456789999988510 279885 345533221 2357899996554 6899999998642
Q ss_pred ceEEEEE-eCCCCCCEEccccCc-cCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 218 GMAFVYW-SWDFIHWTKLDHPLY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 218 G~~~ly~-S~Dl~~W~~~~~~~~-~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+.+.+++ ++|+..+.-....+. ......++|||.+|+.+ | +++|++|..
T Consensus 153 ~~i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 153 SGIKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp TCEEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred CCEEEEEECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 3356666 567766532211122 22235689999999997 6 899999864
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-19 Score=185.37 Aligned_cols=182 Identities=15% Similarity=0.117 Sum_probs=132.3
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC-------CCCeEeeeEEEccC
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD-------INSCWSGSVTILPG 138 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d-------~~Gv~SGsav~~~d 138 (587)
+++||+ +++++|+||||++. .+|.|++|+||+||+.++.||.+...|+ ..++|+++++. .+
T Consensus 6 ~~~DP~-i~~~~g~yyl~~t~----------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~ 73 (318)
T 1gyh_A 6 DVHDPV-MTREGDTWYLFSTG----------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HK 73 (318)
T ss_dssp CCSSCE-EEEETTEEEEEESE----------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ET
T ss_pred ecCCCE-EEEECCEEEEEECC----------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-EC
Confidence 578999 68889999999986 2489999999999999999998876555 46899999988 59
Q ss_pred CeEEEEEeeecCC-CceeEEEEEecCCCCCccc--eeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC
Q 007857 139 DKPFILYTGIDAS-GQQVQNLAMPENLSDPLLK--DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (587)
Q Consensus 139 g~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~--~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~ 215 (587)
|+++|+||+.... ..+.+++|+|++. ||..- .|++. ++|+...+.....+++||.|++. ++|++||++|+..
T Consensus 74 g~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf~D-~dG~~Yl~~g~~~- 148 (318)
T 1gyh_A 74 GLFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIAD-DHGQVWMSFGSFW- 148 (318)
T ss_dssp TEEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEEC-TTSCEEEEECBST-
T ss_pred CEEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeEEC-CCCCEEEEeeccC-
Confidence 9999999987543 4577889999762 22111 29885 46775422223457899996544 6899999998742
Q ss_pred CcceEEEEE-eCC------CCCCEEcc---cc--Cc-cCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 216 NEGMAFVYW-SWD------FIHWTKLD---HP--LY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 216 ~~G~~~ly~-S~D------l~~W~~~~---~~--~~-~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+.+.+++ ++| +..|+... .. +. ......++|||.+|+.+ | +++|++|..
T Consensus 149 --~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 --GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp --TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred --CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 3456776 455 34676431 01 11 11234689999999997 6 899998864
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-20 Score=192.11 Aligned_cols=144 Identities=18% Similarity=0.270 Sum_probs=112.3
Q ss_pred cceEECCEEEEEEEECCCCCC--C-CCCceEEEEEeCCCcccEec-cCCCCCCCccC-----CCCeEeeeEEEccCCeEE
Q 007857 72 GPMYYKGVYHLFYQYNPLGPL--F-GDKMIWAHSVSYDLINWIHL-SHALCPSGPYD-----INSCWSGSVTILPGDKPF 142 (587)
Q Consensus 72 G~~~~~G~YHlfyQ~~P~~~~--~-g~~~~Wgha~S~Dlv~W~~~-~~al~P~~~~d-----~~Gv~SGsav~~~dg~~~ 142 (587)
++++++|+||||||.++.... | + .++|+||+|+|++||++. .++|.|+..++ ..+|++++++..+||+++
T Consensus 54 sai~~dG~y~lfYtg~~~~~~~~~~~-~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~dg~y~ 132 (356)
T 3taw_A 54 AATIYDGKIVVMYRAEDNSAQGIGSR-TSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTEDGTYV 132 (356)
T ss_dssp EEEEETTEEEEEEEEECSSSCSTTSS-CEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEE
T ss_pred EEEEECCEEEEEEEEEcCCCccCCCc-eeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECCCEEE
Confidence 378899999999999987642 2 4 789999999999999994 57888887643 378999999885589999
Q ss_pred EEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccC----------------CeEEeecCCCeE
Q 007857 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRD----------------PTTAWQAPDGRW 206 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRD----------------P~V~w~~~~g~~ 206 (587)
|+||+.. .....+++|.|+|+ ++|++.. +++.++. ..+||| |+ +++ .+|+|
T Consensus 133 m~yt~~~-~~~~~i~la~S~Dl-----~~W~~~g--~i~~~~~---~~~~~~~~~k~~~l~p~~~~g~p~-v~k-~~G~y 199 (356)
T 3taw_A 133 LLYTQWN-RKVPRLAVATSKDL-----KHWTKFG--PAFEKAY---NGKFKDEATKSASLVTTLKGDKQV-IAK-VNGKY 199 (356)
T ss_dssp EEEEEEC-SSCEEEEEEEESSS-----SSCEEEE--ETTSSHH---HHTTTTSCCCCEEEEEEEETTEEE-ECC-BTTBE
T ss_pred EEEEEeC-CCCceEEEEECCCC-----CCceEee--eEcCCcc---ccccccccCCccEEeecccCCCce-EEE-ECCEE
Confidence 9999975 35678999999997 8999863 5554321 123333 23 344 68999
Q ss_pred EEEEeeeeCCcceEEEEEeCCCCCCEEc
Q 007857 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKL 234 (587)
Q Consensus 207 ~m~~g~~~~~~G~~~ly~S~Dl~~W~~~ 234 (587)
+|++|. +.|.+++|+||.+|+..
T Consensus 200 ~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 200 FMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp EEEECS-----SSBEEEEESSSSSCEEC
T ss_pred EEEeCC-----ceeeEEECCCcccCeec
Confidence 999972 45789999999999974
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=186.47 Aligned_cols=178 Identities=18% Similarity=0.167 Sum_probs=134.1
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEE-ccCCeEEEE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-LPGDKPFIL 144 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~-~~dg~~~l~ 144 (587)
...||+ ++.++|+||||++..+. + ..+|.+++|+||+||+..+.+|.+...++..|+|+++++. ..+|+++|+
T Consensus 23 ~~~DP~-i~~~~g~yyl~~t~~~~---~--~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~ 96 (306)
T 3kst_A 23 PIADPY-VMFYNNKYYAYGTGGTT---A--GEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLF 96 (306)
T ss_dssp CCEEEE-EEEETTEEEEEEESCCS---S--SSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCE-EEEECCEEEEEEecCCc---C--CCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEE
Confidence 368999 66779999999997653 2 3579999999999999999999887777778999999864 249999999
Q ss_pred EeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEE
Q 007857 145 YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (587)
Q Consensus 145 YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~ 224 (587)
||+. +.+++|+|++.. -.|++....|++. ...+||.|+ .+++|++||+++...++.+ +.+.+
T Consensus 97 yt~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~vf-~D~dG~~Yl~~~~~~~g~~-i~~~~ 158 (306)
T 3kst_A 97 YSAE-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSLF-IDDDGTPYLYFVRFTDGNV-IWVAQ 158 (306)
T ss_dssp EEET-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEEE-ECTTSCEEEEEEEESSSEE-EEEEE
T ss_pred EECC-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceEE-EeCCCCEEEEEEEeCCCCE-EEEEE
Confidence 9985 368899998863 3688755556652 468999965 4468999999986433222 44444
Q ss_pred -eCCCCCCEEcccc-Ccc------CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 225 -SWDFIHWTKLDHP-LYS------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 225 -S~Dl~~W~~~~~~-~~~------~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
|+|+.+|...... +.. .....++|||.+|+.+ | +++|++|...
T Consensus 159 ls~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~ 209 (306)
T 3kst_A 159 MTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANH 209 (306)
T ss_dssp BCTTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred eCcccccccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCC
Confidence 8999998643211 111 1125689999999997 6 8999998754
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.3e-20 Score=198.33 Aligned_cols=199 Identities=17% Similarity=0.116 Sum_probs=133.9
Q ss_pred ccCCCc-ceEECCEEEEEEEECCCCCCCCC---CceEEEEEe---------CCCcccEeccCCCCCCC--------ccCC
Q 007857 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGD---KMIWAHSVS---------YDLINWIHLSHALCPSG--------PYDI 125 (587)
Q Consensus 67 ~nDPnG-~~~~~G~YHlfyQ~~P~~~~~g~---~~~Wgha~S---------~Dlv~W~~~~~al~P~~--------~~d~ 125 (587)
+.||.| ++-++|..++|++.-|....|+. .+..||..+ .|+.+|+..+.++.++. .++.
T Consensus 80 lqd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~ 159 (496)
T 3vss_A 80 LTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSH 159 (496)
T ss_dssp EECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSE
T ss_pred eECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccC
Confidence 468876 67789988899986544332320 466788655 56779999988775542 1222
Q ss_pred CCeEeeeEEEccCCeEEEEEeeecC--------CCceeEEEEEecCC--CCCccceeeeecCCcEEcCCCC--------C
Q 007857 126 NSCWSGSVTILPGDKPFILYTGIDA--------SGQQVQNLAMPENL--SDPLLKDWVKFSGNPVMTPPNG--------V 187 (587)
Q Consensus 126 ~Gv~SGsav~~~dg~~~l~YTg~~~--------~~~~~q~~A~s~D~--~d~~l~~w~k~~~nPvi~~p~~--------~ 187 (587)
..-|||||++.+||+++||||++.. ...+.|+||.+... .++..++|++.+.+++|-.+.+ .
T Consensus 160 ~~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~ 239 (496)
T 3vss_A 160 QTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQN 239 (496)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTC
T ss_pred CceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccc
Confidence 3469999998889999999998732 12356666654310 0011277888777777733221 1
Q ss_pred CCCCccCCeEEeec-CCCeEEEEEeeeeC-----------------------------------CcceEEEE--EeCCCC
Q 007857 188 KDDMFRDPTTAWQA-PDGRWRVLVGGQID-----------------------------------NEGMAFVY--WSWDFI 229 (587)
Q Consensus 188 ~~~~fRDP~V~w~~-~~g~~~m~~g~~~~-----------------------------------~~G~~~ly--~S~Dl~ 229 (587)
...+||||+|+++. .+|++||++.+... ..|+|.|+ +|+|+.
T Consensus 240 ~~~~fRDP~vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~ 319 (496)
T 3vss_A 240 EFFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLT 319 (496)
T ss_dssp TTCCCEEEEEECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSC
T ss_pred cccccCCCeeEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCC
Confidence 34689999964432 47889999866431 13665554 689999
Q ss_pred CCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 230 HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 230 ~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
.|++.++++.+..-..|||||++|+++ | ||||+.+.
T Consensus 320 ~We~~~PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s 355 (496)
T 3vss_A 320 EWEFLPPILSANCVTDQTERPQIYFKD--G-------------KSYLFTIS 355 (496)
T ss_dssp CEEEEEEEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccEEeCccccCCCCCCceeCCcEEEEC--C-------------EEEEEEec
Confidence 999997555444445699999999998 7 99998774
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=177.09 Aligned_cols=181 Identities=17% Similarity=0.185 Sum_probs=129.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC--------CCCeEeeeEEEc
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--------INSCWSGSVTIL 136 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d--------~~Gv~SGsav~~ 136 (587)
.+++||+ +++++|+||||++. .+|.|++|+||+||+..+.+|.+...++ ..++|+++++.
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~----------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~- 89 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG----------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF- 89 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE----------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-
T ss_pred cCcCCCE-EEEECCEEEEEECC----------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-
Confidence 3589998 68889999999986 2489999999999999999998876554 46899999987
Q ss_pred cCCeEEEEEeeecCC-CceeEEEEEecCCCCCccc--eeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 137 PGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLK--DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 137 ~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~--~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
.+|+++|+||+.... ..+.+++|+|++. ||..- +|++. .+|+..+.. ...+++||.|++. ++|++||++++.
T Consensus 90 ~~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf~D-~dG~~Yl~~g~~ 164 (314)
T 3cu9_A 90 YNGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVVFD-QEGQPWLSFGSF 164 (314)
T ss_dssp ETTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBS
T ss_pred ECCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeEEc-CCCCEEEEEecc
Confidence 599999999987532 4577899999772 22211 39885 467654321 2346899996544 689999999874
Q ss_pred eCCcceEEEEE-eCCCCC----CEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 214 IDNEGMAFVYW-SWDFIH----WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 214 ~~~~G~~~ly~-S~Dl~~----W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
. +.+.+.+ ++|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 165 ~---~~i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 165 W---SGIQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp T---TCEEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred C---CcEEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 2 2356666 344332 3211 111111234689999999997 6 899998864
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=173.07 Aligned_cols=178 Identities=16% Similarity=0.174 Sum_probs=129.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC------CCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD------INSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d------~~Gv~SGsav~~~d 138 (587)
|+.+||+ +++++|+||||++..+. ...|.+++|+||+||+.++.+|.+...++ ..|+|+++++. ++
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~------~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~ 83 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW------FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 83 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE------ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc------CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 6899999 89999999999986542 23589999999999999999987764332 46899999987 69
Q ss_pred CeEEEEEeeecC--C--CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEE---Ee
Q 007857 139 DKPFILYTGIDA--S--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVL---VG 211 (587)
Q Consensus 139 g~~~l~YTg~~~--~--~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~---~g 211 (587)
|++||+||+... . +.+.+++|+|+|.. -.|++ |+.- ....+||.|++. ++|++||+ ++
T Consensus 84 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~D-~dG~~Yl~~~~~~ 148 (528)
T 1yrz_A 84 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFHD-DDGRKWLVNMIWD 148 (528)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEEC-CCCCEEEEEeecc
Confidence 999999997542 1 24568899998863 25764 4432 236799996554 68999999 55
Q ss_pred eeeC--CcceEEEEE-eCCCCCCEEccc--cCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 212 GQID--NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 212 ~~~~--~~G~~~ly~-S~Dl~~W~~~~~--~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
++.. ..+.+.+++ ++|. ++..++ .+..+....++|||.+|+.+ | +++|++|...
T Consensus 149 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~g 207 (528)
T 1yrz_A 149 YRKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 207 (528)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCCC
Confidence 5432 135577777 5664 444433 23333334689999999997 6 8999998743
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.1e-16 Score=166.24 Aligned_cols=153 Identities=20% Similarity=0.250 Sum_probs=113.8
Q ss_pred ccCCCcceEECCEEEEEEEEC--CCCCC-CCCCceEEEEEeCCCcccEeccCC-CCCC------------------CccC
Q 007857 67 INDPNGPMYYKGVYHLFYQYN--PLGPL-FGDKMIWAHSVSYDLINWIHLSHA-LCPS------------------GPYD 124 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~--P~~~~-~g~~~~Wgha~S~Dlv~W~~~~~a-l~P~------------------~~~d 124 (587)
+-+|. +++++|+|||||+.+ |.+.. ++ .+.+++|+|+|+. |++++.+ +.|. ..||
T Consensus 170 v~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~-~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd 246 (408)
T 3p2n_A 170 VFTVE-IMKWEDKYYLCYQTVKSPYNVRVKN-QVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFD 246 (408)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCC-EEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTT
T ss_pred eEeeE-EEEECCEEEEEEEeecCCCCCcCCC-ceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceec
Confidence 44676 788999999999975 32222 33 6789999999998 9997544 4443 4677
Q ss_pred CCCeEeeeEEEccCCeEEEEEeeecCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeE
Q 007857 125 INSCWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTT 197 (587)
Q Consensus 125 ~~Gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V 197 (587)
..+++.++++. .+|+++|+|++.... +.+.+++|+|+|.. -.|+|.++|||+... .||+
T Consensus 247 ~~~v~~P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~--------~dp~- 312 (408)
T 3p2n_A 247 SHKVHDPCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG--------HEIC- 312 (408)
T ss_dssp SSEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC--------SSCC-
T ss_pred CCCeEcceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC--------CCCe-
Confidence 77898888876 699999999997531 24789999999863 379998889998522 3799
Q ss_pred EeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCc
Q 007857 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLY 239 (587)
Q Consensus 198 ~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~ 239 (587)
+|++.+|.|+|+. . +..|...+|+|+|+++|++.+.+..
T Consensus 313 Vw~~~dG~y~mi~-~--~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 313 VWPYNGGIASLIT-T--DGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp EEEETTEEEEEEC-S--SSTTCSEEEEESSSSCCEEEEECSC
T ss_pred eEecCCCEEEEEE-E--CCCCcEEEEECCCCCEEEEEeeccc
Confidence 6876677777763 2 2344445799999999999986543
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.3e-16 Score=162.98 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=97.8
Q ss_pred ccEec---cCCCCCCC------------ccCCCCeEeeeEEEccCCeEEEEEeeecCC------CceeEEEEEecCCCCC
Q 007857 109 NWIHL---SHALCPSG------------PYDINSCWSGSVTILPGDKPFILYTGIDAS------GQQVQNLAMPENLSDP 167 (587)
Q Consensus 109 ~W~~~---~~al~P~~------------~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~~A~s~D~~d~ 167 (587)
-|++. .+.|.|.. +||+.|||+|+|+. .+|+++||||++... +.+.|++|+|+|+
T Consensus 16 pf~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg--- 91 (356)
T 3taw_A 16 GFERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG--- 91 (356)
T ss_dssp CCBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS---
T ss_pred ceeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC---
Confidence 36665 35788875 68999999999998 599999999998642 4688999999996
Q ss_pred ccceeeeecCCcEEcCCCCCC-----CCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccC
Q 007857 168 LLKDWVKFSGNPVMTPPNGVK-----DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 168 ~l~~w~k~~~nPvi~~p~~~~-----~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
++|+|.+ +|||.+.+..+ ..++|||+|+ +.++|+|+|++.+..+..+.+.+|+|+||.+|++.+.++
T Consensus 92 --i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v~-~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 --IHFERDT-KPAFYPAKDNQAENECPGGTEDPRIA-MTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp --SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred --ccceECC-cceecCCCccccccccCCceECCEEE-EECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 7999974 79996544322 3689999964 435889999998765556789999999999999988644
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=159.95 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=127.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc------CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~------d~~Gv~SGsav~~~d 138 (587)
|+..||+ +++++|+||||++..+. ...|.+++|+||+||+..+.+|.+...+ ...|+|+++++. ++
T Consensus 10 g~~~DP~-ii~~~~~yY~~~s~~~~------~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 10 GFNPDPS-ICRAGEDYYIAVSTFEW------FPGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE------ESBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCe-EEEECCEEEEEEecCCC------CCCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 6789999 78899999999886532 1358999999999999999888765322 246899999987 69
Q ss_pred CeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|+++|+||+.... +.+.+++|+|+|.. -.|++ |+.-. ...+||.+++. ++|++||+.+...
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-~dG~~Yl~~~~~~ 146 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFHD-TDGKKYLLNMLWD 146 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEEC-CCCCEEEEEEecc
Confidence 9999999986431 24678899998863 25864 55421 24689996654 6899999988432
Q ss_pred --C---CcceEEEEE-eCCCCCCEEccc--cCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 215 --D---NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 215 --~---~~G~~~ly~-S~Dl~~W~~~~~--~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
. ..+.+.+++ ++|+. +..++ .+..+....++|||.+|+.+ | +++|++|...
T Consensus 147 ~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (533)
T 1yif_A 147 HRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEGG 205 (533)
T ss_dssp CCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 1 123466666 56654 33333 23333334589999999997 6 8999988743
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-14 Score=159.04 Aligned_cols=186 Identities=18% Similarity=0.259 Sum_probs=131.6
Q ss_pred CccCCCcceEECCEEEEEEEECCC-----C-----CCCCCCceEEEEEeCCCcccEeccCCCCCCC----------ccCC
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPL-----G-----PLFGDKMIWAHSVSYDLINWIHLSHALCPSG----------PYDI 125 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~-----~-----~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~----------~~d~ 125 (587)
+..||. +++++|+||||..+... + .... ...|.+++|+||+||+.++.++.+.. .|.
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~-~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w~- 97 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFAN-LNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWA- 97 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTT-CCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTTC-
T ss_pred cCCCCC-eEEECCEEEEEEcCCccccccccccccccccc-ccceEEEECCCCcCcEEccccccCCcccccccccccCcc-
Confidence 578998 77789999999997642 1 1122 46799999999999999988877652 232
Q ss_pred CCeEeeeEEEc-cC--CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCC-CCCccCCeEEee
Q 007857 126 NSCWSGSVTIL-PG--DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVK-DDMFRDPTTAWQ 200 (587)
Q Consensus 126 ~Gv~SGsav~~-~d--g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~-~~~fRDP~V~w~ 200 (587)
.++|.++++.. .| |++||+||... +.+++|+|+|.. -.|+...++|++... ++.. ....+||.|+++
T Consensus 98 ~~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~D 169 (487)
T 3c7f_A 98 GASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVD 169 (487)
T ss_dssp SCCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEEC
T ss_pred ccCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEEc
Confidence 47999999863 14 69999999642 568999998863 258875457888532 2221 246799996655
Q ss_pred cCCCeEEEEEeeeeC-----------CcceEEEE-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccC
Q 007857 201 APDGRWRVLVGGQID-----------NEGMAFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL 268 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~-----------~~G~~~ly-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~ 268 (587)
++|++||++|.... ....+.+. -++|+..|......+. ...+.|+|.+++.+ |
T Consensus 170 -ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G--------- 234 (487)
T 3c7f_A 170 -DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G--------- 234 (487)
T ss_dssp -TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T---------
T ss_pred -CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C---------
Confidence 68999999987421 01223444 4789999975432222 23589999999997 6
Q ss_pred CCCceeEEEEeeC
Q 007857 269 NPGVKHVLKTSLF 281 (587)
Q Consensus 269 ~~~~k~vl~~s~~ 281 (587)
+++|++|..
T Consensus 235 ----~YYl~ys~~ 243 (487)
T 3c7f_A 235 ----TYYYSYCIN 243 (487)
T ss_dssp ----EEEEEEEEC
T ss_pred ----EEEEEEECC
Confidence 888888864
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-14 Score=159.22 Aligned_cols=178 Identities=16% Similarity=0.138 Sum_probs=128.4
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc------CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~------d~~Gv~SGsav~~~d 138 (587)
|+..||. +++++|+||||++.... ...|.+++|+||+||+..+.+|.+...+ +..|+|+++++. ++
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~------~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 82 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW------FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SD 82 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE------ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC------CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 7899999 78999999999875431 2468999999999999999988765322 346899999987 69
Q ss_pred CeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|++||+||+.... +.+.+++|+|+|.. -.|++ |+.-. ...+||.++++ ++|++||+.+...
T Consensus 83 g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~D-ddG~~Yl~~~~~~ 147 (535)
T 2exh_A 83 GKFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFHD-EDGRKYLVNMYWD 147 (535)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEEC-CCCCEEEEEEecC
Confidence 9999999986431 24677899998753 25764 44321 25799996554 6899999987432
Q ss_pred C-----CcceEEEEE-eCCCCCCEEccc--cCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 215 D-----NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 215 ~-----~~G~~~ly~-S~Dl~~W~~~~~--~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
. ..+.|.+++ ++|+ |+..++ .+..+....++|||.+|+.+ | +++|++|...
T Consensus 148 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 206 (535)
T 2exh_A 148 HRVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 206 (535)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 1 123466666 5665 455443 23333334589999999997 6 8999988753
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-14 Score=153.64 Aligned_cols=176 Identities=17% Similarity=0.096 Sum_probs=129.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc--cCC-CCeEeeeEEEc-cCCeEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--YDI-NSCWSGSVTIL-PGDKPFI 143 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~--~d~-~Gv~SGsav~~-~dg~~~l 143 (587)
.||. +++++|+||||.++.+.... . ...|.+++|+||+||+.++.+|.+... +.. .++|.+.++.. .+|++||
T Consensus 25 HDPs-Ii~~~g~YYly~T~~~~~~~-~-~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYL 101 (441)
T 3nqh_A 25 HGAC-IVEENGRYYLFGEYKSDKSN-A-FPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVM 101 (441)
T ss_dssp EEEE-EEEETTEEEEEEECCCSSCS-S-CCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEE
T ss_pred cCCE-EEEECCEEEEEEEcCCccCC-C-CCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEE
Confidence 4885 99999999999998765432 2 467999999999999999999977643 322 25799998763 5999999
Q ss_pred EEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEE
Q 007857 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (587)
Q Consensus 144 ~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~l 222 (587)
+||+.... ..+.+++|+|++.. -.|+.. +|++.... ....+||.|+++ ++|++||++|.. . +
T Consensus 102 yyt~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g~---~~~~IDPsvF~D-dDGk~YL~~g~~-----~--I 164 (441)
T 3nqh_A 102 YMHADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEGK---PIRRWDMGTYQD-TDGTGYLLLHGG-----I--V 164 (441)
T ss_dssp EEEEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETTE---ECCCCSEEEEEC-TTSCEEEEEGGG-----E--E
T ss_pred EEEeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCCC---cccccCceEEEe-CCCCEEEEeCCC-----c--E
Confidence 99987532 35678999998754 257753 57774211 125689996554 789999999752 2 3
Q ss_pred EE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 223 YW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 223 y~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
++ ++|+.++......+. .+...|||.+|+.+ | +++|++|..
T Consensus 165 ~eLs~D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~ 206 (441)
T 3nqh_A 165 YRLSKDYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNL 206 (441)
T ss_dssp EEECTTSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECS
T ss_pred EEeCCccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCC
Confidence 44 789988864322221 23578999999997 6 899999863
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=152.58 Aligned_cols=121 Identities=8% Similarity=0.058 Sum_probs=99.8
Q ss_pred CCCcccEeccCCCCCCC-ccCCCCeEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcC
Q 007857 105 YDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP 183 (587)
Q Consensus 105 ~Dlv~W~~~~~al~P~~-~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~ 183 (587)
..+++|+..| +|.|+. +| +.|||+|+|+.. +|+++|||++....+.+.|++|+|+|+ ++|++.+ +|||.+
T Consensus 34 ~~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p 104 (338)
T 1vkd_A 34 GPVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWV 104 (338)
T ss_dssp SSEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEE
T ss_pred CceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeC
Confidence 3578888777 799985 77 789999999884 999999999987667789999999997 7999974 788855
Q ss_pred C--CCCCCCCcc-CCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEcccc
Q 007857 184 P--NGVKDDMFR-DPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (587)
Q Consensus 184 p--~~~~~~~fR-DP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~ 237 (587)
. ...+..++| ||+|+ + .+|+|||++++ ....+++.+++|+|+.+|++.+.+
T Consensus 105 ~~~~~~~~~g~~yDP~v~-~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i 158 (338)
T 1vkd_A 105 DVNGEPFQPSYAYDPRVV-K-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNA 158 (338)
T ss_dssp CTTSCBCCCSSEEEEEEE-E-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCccccCCEEeCcEEE-E-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCcc
Confidence 4 345678999 99964 4 36899999998 655678999999999999998753
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.9e-14 Score=151.70 Aligned_cols=124 Identities=18% Similarity=0.227 Sum_probs=98.4
Q ss_pred CcccEeccCCCCCCC-------------ccCCCCeEeeeEEEccCCeEEEEEeeecCC------CceeEEEEEecCCCCC
Q 007857 107 LINWIHLSHALCPSG-------------PYDINSCWSGSVTILPGDKPFILYTGIDAS------GQQVQNLAMPENLSDP 167 (587)
Q Consensus 107 lv~W~~~~~al~P~~-------------~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~~A~s~D~~d~ 167 (587)
+++|+...++|.|+. +||+.|||+|+|+. .+|+++||||++... +.+.+++|+|+|+
T Consensus 19 f~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG--- 94 (364)
T 3qc2_A 19 FERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG--- 94 (364)
T ss_dssp CBCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS---
T ss_pred ceeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC---
Confidence 344444356899986 78999999999997 599999999998653 4688999999997
Q ss_pred ccceeeeecCCcEEcCCCCCCC-----CCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccC
Q 007857 168 LLKDWVKFSGNPVMTPPNGVKD-----DMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 168 ~l~~w~k~~~nPvi~~p~~~~~-----~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
+||++. .+|||.+....+. .++|||+|+ +.++|+|||++++.....+++.+++|+|+.+|++.+.++
T Consensus 95 --i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v~-~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 --THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRIA-VTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp --SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred --ceeeEc-CcCeEcCCCccccccccCCcEECCEEE-EeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 799996 4799865443332 579999964 435889999999876556789999999999999987543
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8.2e-13 Score=140.10 Aligned_cols=153 Identities=16% Similarity=0.230 Sum_probs=108.1
Q ss_pred CCCcceEECCEEEEEEEECCCCC-CCCCCceEEEEEeCCC-cccEecc-CCCCCC------------------CccCCCC
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYDL-INWIHLS-HALCPS------------------GPYDINS 127 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~-~~g~~~~Wgha~S~Dl-v~W~~~~-~al~P~------------------~~~d~~G 127 (587)
.|. +++++|+|||||..+.... ... ..+.++|+|+|+ .+|++.+ +.|.|. ..++..+
T Consensus 127 aPs-vi~~dGkyyL~Yt~~~~~~~~~~-~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~~~ 204 (374)
T 3r4z_A 127 TPE-VLRHNGTYYLVYQTVKAPYLNRS-LEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSHK 204 (374)
T ss_dssp EEE-EEEETTEEEEEEEEECSSCCTTC-CBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTSSE
T ss_pred CCE-EEEECCEEEEEEEeccCCCCCCC-cceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCccccCc
Confidence 465 7788999999999764322 122 578999999997 6999874 344443 1235556
Q ss_pred eEeeeEEEccCCeEEEEEeeecCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee
Q 007857 128 CWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~ 200 (587)
++.++++. .+|+++|+|++.... +.+.+++|+|++.. -.|+|.+.|||+.. .+||+ +|+
T Consensus 205 ~~~P~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~--------~~dp~-V~~ 270 (374)
T 3r4z_A 205 VHDPCLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNS--------GHEVA-VWP 270 (374)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSS--------CSSCC-EEE
T ss_pred cccceEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCC--------CCCCc-eEE
Confidence 88888876 699999999998532 14689999998753 36999888999842 24999 577
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCcc
Q 007857 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYS 240 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~ 240 (587)
. ++.|+++++......+ .++.|+|+++|++.+.+...
T Consensus 271 ~-~~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~ 307 (374)
T 3r4z_A 271 Y-KGGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGA 307 (374)
T ss_dssp E-TTEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCC
T ss_pred e-CCEEEEEEEecCCCce--EEEECCCcCCeEEcceeccC
Confidence 4 4556444454333344 56779999999999875543
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-12 Score=144.85 Aligned_cols=200 Identities=15% Similarity=0.110 Sum_probs=134.2
Q ss_pred CCcccceeecCCCC---CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--ccCCC
Q 007857 52 QPYLTSYHFRPPQN---WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDIN 126 (587)
Q Consensus 52 ~~~Rp~yH~~p~~g---w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~d~~ 126 (587)
...+|..++..+.| ...||. +++++|+||||........ + ...+..++|+||+||+..+.+|.+.. .++..
T Consensus 40 ~~~~~g~~w~d~~g~~i~a~DP~-Ii~~~g~YY~~~T~~~~~~--~-~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~ 115 (526)
T 3vsf_A 40 GVIVNGTQFKDTSGNVIHAHGGG-MLKHGDYYYWYGEYRDDSN--L-FLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHC 115 (526)
T ss_dssp CEEESSBCCBCTTSCBCCCEEEE-EEEETTEEEEEEEEECTTS--S-EEEEEEEEESSSSSCEEEEEEEETTSSGGGSSC
T ss_pred ceEeCCCccCCCCCCEEeccCCe-EEEECCEEEEEEecCCCCC--C-cCcEEEEECCCCCCcCCCCccCCCCCCcCcccC
Confidence 34555555554433 346997 8999999999998753321 2 45799999999999999998887654 45556
Q ss_pred CeEeeeEEEc-cCCeEEEEEeeecC--CCceeEEEEEecCCCCCccceeeeec-CCcEEcC---CCCCCCCCccCCeEEe
Q 007857 127 SCWSGSVTIL-PGDKPFILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP---PNGVKDDMFRDPTTAW 199 (587)
Q Consensus 127 Gv~SGsav~~-~dg~~~l~YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~-~nPvi~~---p~~~~~~~fRDP~V~w 199 (587)
++|.+.++.. .+|++||||+.... ...+.+++|+|++..+ .|+... ..|+... +.+......+||.|++
T Consensus 116 ~~WAP~v~~~~~~Gkyymy~~~~~~~~~~~~~igvats~~p~G----pw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~ 191 (526)
T 3vsf_A 116 NIERPKVMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPDG----KFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFV 191 (526)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEECSSCSCCCEEEEEEESSSSS----CCEEEEEECSSCTTCCEETTEESCCCCSEEEEE
T ss_pred ceECCEEEEECCCCEEEEEEEeeCCCCCCcceEEEEEcCCCCC----CCEeccccccccccccccCCCCCcccccccEEE
Confidence 7999999874 38999999996521 2357889999988642 566431 1343211 0111124679999654
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEE
Q 007857 200 QAPDGRWRVLVGGQIDNEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKT 278 (587)
Q Consensus 200 ~~~~g~~~m~~g~~~~~~G~~~ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~ 278 (587)
+ ++|++||++++.. .+.+.+++ ++|+..+......+. .+...|+|.+|+.+ | +++|++
T Consensus 192 D-~dG~~Yl~~~~~~--~~~i~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~ 250 (526)
T 3vsf_A 192 D-TDGKGYFISAANE--NMDLHLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLIT 250 (526)
T ss_dssp C-TTSCEEEEEEETT--TTEEEEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEE
T ss_pred C-CCCCEEEEEEecC--CCceEEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEE
Confidence 4 6899999998642 23345554 567776643222122 23567999999987 6 889998
Q ss_pred ee
Q 007857 279 SL 280 (587)
Q Consensus 279 s~ 280 (587)
|.
T Consensus 251 S~ 252 (526)
T 3vsf_A 251 SG 252 (526)
T ss_dssp EC
T ss_pred cC
Confidence 84
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.3e-12 Score=135.68 Aligned_cols=155 Identities=20% Similarity=0.243 Sum_probs=109.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCC-CCCCCceEEEEEeCC-CcccEecc-CCCCCCC------------------ccCC
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLS-HALCPSG------------------PYDI 125 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~-~~g~~~~Wgha~S~D-lv~W~~~~-~al~P~~------------------~~d~ 125 (587)
+-+|. +++++|+|||||..+.... ..+ ....|+|+|++ .-.|++.+ ++|.|.. .||.
T Consensus 165 v~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~-~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~ 242 (404)
T 4ak5_A 165 VFTPE-VMEWKGKYYLCYQAVKSPYTVRV-KNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDS 242 (404)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSCCCTTC-CCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTS
T ss_pred EEeeE-EEEECCEEEEEEEeccCCCCCCC-cceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccC
Confidence 34665 7889999999998654321 123 56899999986 34899874 3455432 3466
Q ss_pred CCeEeeeEEEccCCeEEEEEeeecCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEE
Q 007857 126 NSCWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTA 198 (587)
Q Consensus 126 ~Gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~ 198 (587)
.+++.++++. .+|+++|||++.... +.+.+++|+|+|.. -.|+|.+.|||+.. + .+++ +
T Consensus 243 ~~~~~P~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~--~------~e~~-V 308 (404)
T 4ak5_A 243 HKVHDPCIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNS--G------HEVC-V 308 (404)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSS--C------SSCC-E
T ss_pred CcEECCEEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecC--C------Ccce-E
Confidence 7789999876 699999999998542 14689999998863 37999888999942 1 1557 6
Q ss_pred eecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCcc
Q 007857 199 WQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYS 240 (587)
Q Consensus 199 w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~ 240 (587)
|++.+|.|+|+... ..+.| .++.|+|+++|++.+.+...
T Consensus 309 w~~~dg~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~ 347 (404)
T 4ak5_A 309 WPYKGGIASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGA 347 (404)
T ss_dssp EEETTEEEEEECSS-STTCS--EEEEESSSSCCEEEEECSCC
T ss_pred EEeCCcEEEEEEec-CCCce--EEEECCCCCeEEEeeeeccC
Confidence 88555544666432 23455 57779999999999876543
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.40 E-value=4.3e-12 Score=138.42 Aligned_cols=179 Identities=19% Similarity=0.274 Sum_probs=114.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc--------------c-CCCCeEee
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--------------Y-DINSCWSG 131 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~--------------~-d~~Gv~SG 131 (587)
..||. +++++|+||||.. +...++|+||+||+..+.+|.+... | ...++|.+
T Consensus 36 ~~DPs-ii~~~g~YYl~~T------------~~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP 102 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGS------------HLASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAA 102 (470)
T ss_dssp CSSCE-EEEETTEEEEECS------------TTCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCC
T ss_pred CCCCE-EEEECCEEEEEEC------------cCceEECCCcccceeccccccccccccccccccccccccccCCCceECC
Confidence 57998 8888999999743 1235899999999999877754321 2 23589999
Q ss_pred eEEEccCCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCC-----CC--C---CCCCccCCeEEee
Q 007857 132 SVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-----NG--V---KDDMFRDPTTAWQ 200 (587)
Q Consensus 132 sav~~~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-----~~--~---~~~~fRDP~V~w~ 200 (587)
+++..++|++||||+..... ..+.+++|+|+|.. -.|+.. +.++.... .+ + .....+||.|++.
T Consensus 103 ~vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~D 177 (470)
T 2x8s_A 103 DVTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFFD 177 (470)
T ss_dssp EEEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEEC
T ss_pred eEEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEEc
Confidence 99875589999999986432 45678899998863 258875 23444320 00 1 1245789997655
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEe-CCCC---CCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEE
Q 007857 201 APDGRWRVLVGGQIDNEGMAFVYWS-WDFI---HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVL 276 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~~~G~~~ly~S-~Dl~---~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl 276 (587)
++|++||++|... |.+.+.+- +|.. .|+..+..+.. ......|.|.+|.-...| +++|
T Consensus 178 -dDG~~Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~~-g~~~~~EGP~i~~~K~~G-------------~YYL 239 (470)
T 2x8s_A 178 -KDGKLWMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLLG-GNHSRIEGPYVLYNPDTQ-------------YYYL 239 (470)
T ss_dssp -TTSCEEEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEEC-CSSCSEEEEEEEEETTTT-------------EEEE
T ss_pred -CCCCEEEEeeecC---CcEEEEEECCccCcCcCCcccceEecC-CCCCceeccEEEEEccCC-------------EEEE
Confidence 6899999998642 33455553 3321 12111111111 122468999999542215 8999
Q ss_pred EEeeC
Q 007857 277 KTSLF 281 (587)
Q Consensus 277 ~~s~~ 281 (587)
++|..
T Consensus 240 ~~S~g 244 (470)
T 2x8s_A 240 YLSYG 244 (470)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 98864
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-11 Score=135.69 Aligned_cols=178 Identities=17% Similarity=0.180 Sum_probs=123.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc------cCCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP------YDINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~------~d~~Gv~SGsav~~~d 138 (587)
|+..||. +++.+|+||||..... | ...+..++|+||+||+..+.+|.+... .+..++|.++++. ++
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~--~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W--FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-AD 81 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C--CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 6789998 8999999999875321 1 235789999999999999988865431 1246799999987 59
Q ss_pred CeEEEEEeeecC-C---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDA-S---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~-~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|++||+||.... . ..+.+++|+|+|.. -.|++ |+.-. ...+||.++++ ++|++||+.+...
T Consensus 82 g~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-ddG~~Yl~~~~~~ 146 (538)
T 3c2u_A 82 GKFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFHD-PSGKKYLVNMYWD 146 (538)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEEC-CCCCEEEEEEecC
Confidence 999999997643 1 24567899998763 24764 44321 24589997655 6899999987432
Q ss_pred C-----CcceEEEEE-eCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 215 D-----NEGMAFVYW-SWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 215 ~-----~~G~~~ly~-S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
. ..+.+.+.+ +.|. |+..+++ +..+......|+|.+++.+ | +|+|++|...
T Consensus 147 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (538)
T 3c2u_A 147 QRVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEGG 205 (538)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecCC
Confidence 1 123455665 4554 4544432 2223334578999999987 6 8999988753
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=7.8e-09 Score=114.53 Aligned_cols=174 Identities=11% Similarity=0.088 Sum_probs=112.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC---c---------cCCCCeEeee
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG---P---------YDINSCWSGS 132 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~---~---------~d~~Gv~SGs 132 (587)
|+.-||. ++..+|+|+||-.... | ...+....|+||+||+..+.+|.... . ....|+|.++
T Consensus 15 g~~~DP~-iir~~~~YY~~~st~~----~--~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 15 EDHPALE-VFRVGSVFYYSSSTFA----Y--SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp SCCCSCE-EEEETTEEEEECCCBT----E--ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCe-EEEECCEEEEEEecCc----c--CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 5668998 8999999999853211 1 12477889999999999988774321 0 1136899999
Q ss_pred EEEcc-CCeEEEEEeeecCCCceeEEEEEecCCCCCc-----cce---eeeecCCcEEcCCCCCCCCCccCCeEEeecCC
Q 007857 133 VTILP-GDKPFILYTGIDASGQQVQNLAMPENLSDPL-----LKD---WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 133 av~~~-dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~-----l~~---w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~ 203 (587)
+.... +|++||+|+.. ..+.+|++++..+|+ |++ |+. |+.-. ....||.++++ ++
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~----~~~~~------~~~iDp~~f~D-dD 151 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQH----TATID------NCYYDAGLLID-DD 151 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEE----EEEES------SCCTTCEEEEC-TT
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCcccc----ccccC------CCCCCCcEEEc-CC
Confidence 98742 39999999863 457889988765442 011 553 11111 34569997665 78
Q ss_pred CeEEEEEeeeeCCcceEEEEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 204 GRWRVLVGGQIDNEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 204 g~~~m~~g~~~~~~G~~~ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+.||+.|. +.+.+.+ ++|+..=......+.....+...|-|-+++.+ | +++|++|..
T Consensus 152 G~~Yl~~g~-----~~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~--G-------------~YYL~~s~~ 210 (542)
T 3zxk_A 152 DTMYIAYGN-----PTINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR--G-------------NYYILVTRP 210 (542)
T ss_dssp SCEEEEECS-----SSEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET--T-------------EEEEEEEET
T ss_pred CCEEEEEcC-----CCEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC--C-------------EEEEEEEeC
Confidence 999999974 2344444 45553321111112222233378999999987 6 888888864
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=6.9e-09 Score=113.10 Aligned_cols=178 Identities=16% Similarity=0.125 Sum_probs=116.1
Q ss_pred cCCCcceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC--CC-CccCCCCeEeeeEEEccCCeEEE
Q 007857 68 NDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC--PS-GPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 68 nDPnG~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~--P~-~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
-||. +++ .+|+|+||.... . ..++..++|+||+||+..+.++. +. ......++|.+.++. .+|++||
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~----~---~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyl 90 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVP----E---YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYV 90 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECT----T---CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeC----C---CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEE
Confidence 8997 777 599999998753 1 24699999999999998764332 21 122345799999987 5999999
Q ss_pred EEeeecCCC--ceeEEEEE--ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---C
Q 007857 144 LYTGIDASG--QQVQNLAM--PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---N 216 (587)
Q Consensus 144 ~YTg~~~~~--~~~q~~A~--s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~---~ 216 (587)
+|+...... ...+++|+ ++|. .--.|+... .++.+. + ....||.+++ ++|++||+.+.... .
T Consensus 91 yys~~~~~~~~~~~i~va~~~s~dp---~~Gpw~~~g--~~~~~~-~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~ 159 (468)
T 3akh_A 91 YFAAGSTSDVWAIRMYVLESGAANP---LTGSWTEKG--QIATPV-S---SFSLDATTFV--VNGVRHLAWAQRNPAEDN 159 (468)
T ss_dssp EEEEECSSCTTCCEEEEEEECCSCT---TTSCCEEEE--ECCCSS-C---SCEEEEEEEE--ETTEEEEEEEECCTTSSS
T ss_pred EEEeECCCCCCceeEEEEEccCCCC---CCCCCcccc--eeecCC-C---CCcCcCeEEE--ECCEEEEEEEccCCCCCC
Confidence 999875321 34566776 5553 113687642 233221 1 3467999654 58999999986431 1
Q ss_pred cceEEEEEeCCCCCCEEcccc--CccCC------CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 217 EGMAFVYWSWDFIHWTKLDHP--LYSVQ------ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 217 ~G~~~ly~S~Dl~~W~~~~~~--~~~~~------~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.+.+.+.+.+|. |+..+++ +.... .....|-|-+++.+ | +++|++|...
T Consensus 160 ~~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 160 NTSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp SBEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 234666676653 6655442 11111 12367999999976 5 8899988754
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.1e-08 Score=102.72 Aligned_cols=183 Identities=13% Similarity=0.107 Sum_probs=110.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCC--C-CCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA--L-CPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~a--l-~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
-||. ++.+++.|+||+...+.. ..+....|+||++|+..... + .+.......++|.+.++. .+|++||+
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~~------~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yyly 89 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPEY------DRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIY 89 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTTC------CEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCCC------CCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEE
Confidence 6997 889999999999865432 35778899999999865432 1 222333446799999987 69999999
Q ss_pred EeeecCC-----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee--CCc
Q 007857 145 YTGIDAS-----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DNE 217 (587)
Q Consensus 145 YTg~~~~-----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~--~~~ 217 (587)
|+..... .......+++.+..+|.-..|+.. ..+.... ...-.||.|++. .+++|+|+.+... ...
T Consensus 90 ys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~---~~~~IDp~vf~D-dd~~~~~~~~~~~~~~~~ 162 (330)
T 3k1u_A 90 FAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAW---ESFSLDATIFEH-NEKLYYVWAQQDINIKGH 162 (330)
T ss_dssp EEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSS---CSCEEEEEEEEE-TTEEEEEEEECCTTSSSS
T ss_pred EEeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCC---CCCccCceEEEE-CCccEEEEeecCCCcCCC
Confidence 9976432 112234455544434433456542 1221111 123479996554 5677776655432 122
Q ss_pred ceEEEEEeCCCCCCEEccccC--ccC------CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 218 GMAFVYWSWDFIHWTKLDHPL--YSV------QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 218 G~~~ly~S~Dl~~W~~~~~~~--~~~------~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
+.+.+.+-++. ++..+++. ... ......|-|-+++.+ | +++|++|...
T Consensus 163 ~~i~i~~l~~~--~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 163 SNIYIAEMENP--WTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp BEEEEEEEEET--TEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred ceEEEEECCCC--ccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 34555554332 34444321 111 112356999999987 6 8999998754
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.58 E-value=8.2e-07 Score=91.38 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=95.6
Q ss_pred CCCcceEE----CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEcc-CCeEE
Q 007857 69 DPNGPMYY----KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILP-GDKPF 142 (587)
Q Consensus 69 DPnG~~~~----~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~-dg~~~ 142 (587)
-|. ++++ +|+|||||..+..+. + ....++|+|+|.. .|++++..|....+.....+.++++++++ ||+++
T Consensus 79 AP~-v~~~~~~~~Gkyylyyt~~~~~~--~-~~~i~va~s~~p~Gpw~~~~~p~~~~~~~g~~~~iDp~vf~dd~dG~~y 154 (311)
T 3qz4_A 79 APC-IEEKKIDGKYKYFFYYSANPTTN--K-GKQIGVAVADSPTGPFTDLGKPIITSSPTGRGQQIDVDVFTDPVSGKSY 154 (311)
T ss_dssp EEE-EEEEEETTEEEEEEEEEEEETTC--S-SCEEEEEEESSTTCCCEECSSCSBCSCTTSSSBSCCCEEEECTTTCCEE
T ss_pred CCe-eEEeeecCCCEEEEEEEeccCCC--C-CeeEEEEEECCCCCCceECCcceEcCCCCCCcccccccEEEECCCCcEE
Confidence 465 7888 999999999775432 2 4679999999976 99997643333222111346789999876 89999
Q ss_pred EEEeeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCC---CCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 143 ILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGV---KDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~---~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|+|.+ ..+.+|. +.|. .+|... ...++. +.+. ......-|++ ++ .+|+|||++++......
T Consensus 155 l~~g~------~~i~~~~l~~d~-----~~~~~~-~~~i~~-~~~~~~~~~~~~EgP~i-~k-~~g~YyL~~s~~~~~~~ 219 (311)
T 3qz4_A 155 LYWGN------GYMAGAELNDDM-----LSIKEE-TTVVLT-PKGGTLQTYAYREAPYV-IY-RKGIYYFFWSVDDTGSP 219 (311)
T ss_dssp EEECB------SSCEEEEBCTTS-----SSBCGG-GCEECC-CCCCCTTTTCCCEEEEE-EE-ETTEEEEEEEESCTTST
T ss_pred EEEcC------CCEEEEEeCCcc-----cccCCC-ceEEeC-CCCCcccccceeeccEE-EE-ECCEEEEEEEcCCCCCC
Confidence 99975 1233443 4443 455532 223333 2221 1124567885 55 58999999987642212
Q ss_pred --eEEEEEeCCCC-CCEEcc
Q 007857 219 --MAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 219 --~~~ly~S~Dl~-~W~~~~ 235 (587)
++.+++|+++. -|+..+
T Consensus 220 ~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 220 NYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp TCEEEEEEESSTTCCCEEEE
T ss_pred CceEEEEEcCCCCCCCEeCC
Confidence 57788999987 498865
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.1e-05 Score=82.82 Aligned_cols=147 Identities=14% Similarity=0.166 Sum_probs=92.7
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccC-CCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSH-ALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~-al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.|. +++. +|+|||||..+ .+.++|+|+|.. .|+.... .|.. ....+++++.++||++||+
T Consensus 81 AP~-v~~~~~~g~~yl~yt~~---------~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl~ 144 (306)
T 3kst_A 81 APE-VYYVESKKKFYLFYSAE---------EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYLY 144 (306)
T ss_dssp EEE-EEEETTTTEEEEEEEET---------TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEEE
T ss_pred cCe-EEEECCCCEEEEEEECC---------CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEEE
Confidence 344 5677 99999999864 358999999976 8997531 1211 3468999998778999999
Q ss_pred EeeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCC---CCCccCCeEEeecCCCeEEEEEeeee--CCcc
Q 007857 145 YTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVK---DDMFRDPTTAWQAPDGRWRVLVGGQI--DNEG 218 (587)
Q Consensus 145 YTg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~---~~~fRDP~V~w~~~~g~~~m~~g~~~--~~~G 218 (587)
|.... ..+.+.+|. +.|. .+|.......++.+...++ ...+.-|.+ ++ .+|+|||++++.. ...-
T Consensus 145 ~~~~~--~g~~i~~~~ls~d~-----~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i-~k-~~G~YYL~~S~~~~~~~~y 215 (306)
T 3kst_A 145 FVRFT--DGNVIWVAQMTDDL-----MSIKTETLNQCIKAEVSWELLQGKVAEGPSL-LK-KNGVYYLIYSANHYENKGY 215 (306)
T ss_dssp EEEES--SSEEEEEEEBCTTS-----SCBCGGGCEEEECCCSGGGCSSSSBEEEEEE-EE-ETTEEEEEEEESCTTSTTC
T ss_pred EEEeC--CCCEEEEEEeCccc-----ccccCcceeeeccCCccceecCCCceecceE-EE-ECCEEEEEEEeCCCCCCCc
Confidence 97543 223344554 4443 5665432222332221121 234457884 45 5899999997643 1122
Q ss_pred eEEEEEeCCCC-CCEE-ccccCcc
Q 007857 219 MAFVYWSWDFI-HWTK-LDHPLYS 240 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~-~~~~~~~ 240 (587)
++.+++|+++. -|+. .+.++..
T Consensus 216 ~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 216 GVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp EEEEEEESSTTCCCEECTTCCSBS
T ss_pred eEEEEEeCCCCCCCEeCCCCeeEe
Confidence 57788999987 7998 3445543
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=3.3e-06 Score=85.94 Aligned_cols=152 Identities=13% Similarity=0.184 Sum_probs=95.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc--ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI--NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv--~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
-.|. +++++|+|||||..+..+. . ....++|+|+|+. +|++.+..|..... ....+..+++++++||+.+|+|
T Consensus 74 wAP~-v~~~~G~yylyyt~~~~~~--~-~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~ 148 (293)
T 1uv4_A 74 WAPD-IQYYNGKYWLYYSVSSFGS--N-TSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAF 148 (293)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTC--S-CEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEE
T ss_pred ecce-EEEECCEEEEEEEecCCCC--C-cceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEE
Confidence 3565 7889999999999765432 2 5678999999997 99987544433221 1234678999887799999999
Q ss_pred eeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCcce
Q 007857 146 TGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGM 219 (587)
Q Consensus 146 Tg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~G~ 219 (587)
.+.. ..+.++. +.|. .++... ...++..+. ....+..|.+ ++ .+|+|||++.+.. +..-+
T Consensus 149 g~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~y~ 214 (293)
T 1uv4_A 149 GSFW----SGIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYK 214 (293)
T ss_dssp CBST----TCEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEE
T ss_pred EecC----CCEEEEEECchh-----CccCCc-ceEEeecCC--CCCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCcce
Confidence 6532 2244554 3343 223211 112333222 1245678884 55 4899999987642 11124
Q ss_pred EEEEEeCCCC-CCEEc-cccC
Q 007857 220 AFVYWSWDFI-HWTKL-DHPL 238 (587)
Q Consensus 220 ~~ly~S~Dl~-~W~~~-~~~~ 238 (587)
+.+++|+++. -|+.. +.++
T Consensus 215 ~~~~~s~~~~GP~~~~~~~p~ 235 (293)
T 1uv4_A 215 IAYGRSKSITGPYLDKSGKSM 235 (293)
T ss_dssp EEEEEESSTTCCCBCTTSCBG
T ss_pred EEEEEeCCCCCCCCccCCCee
Confidence 7788999876 57764 3344
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.5e-06 Score=89.94 Aligned_cols=128 Identities=9% Similarity=0.029 Sum_probs=87.6
Q ss_pred ceEECCEEEEEEEECCC-CCCCCCCceEEEEEeCCCcccEe--ccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 73 PMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLINWIH--LSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~-~~~~g~~~~Wgha~S~Dlv~W~~--~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
++..+|+|||||..+.. ...++.....++|+|+|+.+|++ ..++|.+.......+.-++.++. ++|+++|+|.+..
T Consensus 78 av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~-~dg~~~m~~g~~~ 156 (432)
T 1w2t_A 78 AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGK 156 (432)
T ss_dssp EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-CSSSEEEEEEEEE
T ss_pred EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEE-ECCEEEEEEEEec
Confidence 55689999999987543 22222146789999999999998 45656543211123467888776 4999999998764
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
........++.|+|+ ++|+... ++... .+ ...|--|.+ ++ .+|+|||+++.+
T Consensus 157 ~~~~g~i~ly~S~Dl-----~~W~~~g--~~~~~-~~--g~~~EcP~l-f~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 157 DEKIGRVLLYTSDDL-----FHWKYEG--AIFED-ET--TKEIDCPDL-VR-IGEKDILIYSIT 208 (432)
T ss_dssp TTTEEEEEEEEESSS-----SSCEEEE--EEEEE-TT--CSCCEEEEE-EE-ETTEEEEEEEET
T ss_pred CCCCcEEEEEECCCC-----CCceEcc--ccccC-CC--CCEEECCeE-EE-ECCEEEEEEeCC
Confidence 334456778888886 8998753 44432 11 245778884 44 478999999875
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.3e-05 Score=82.46 Aligned_cols=160 Identities=11% Similarity=0.119 Sum_probs=95.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC--c-c---cEeccCCCCCCCccCCCCeEeeeEEEccCCeE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--I-N---WIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl--v-~---W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~ 141 (587)
-.|. +++++|+|||||..+..+. . ....|+|+|+++ . . |++.+..+.+....+......+++++++||+.
T Consensus 65 wAP~-v~~~~g~~ylyyt~~~~~~--~-~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~ 140 (318)
T 1gyh_A 65 WAPD-IYQHKGLFYLYYSVSAFGK--N-TSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQV 140 (318)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTS--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCE
T ss_pred ccCe-EEEECCEEEEEEEeccCCC--C-cceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCCE
Confidence 3455 7788999999999775432 2 467899999984 2 3 99876544432222223467899988778999
Q ss_pred EEEEeeecCCCceeEEEEEe-cCCC-CCccceeeeecCC--c--EEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee--
Q 007857 142 FILYTGIDASGQQVQNLAMP-ENLS-DPLLKDWVKFSGN--P--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ-- 213 (587)
Q Consensus 142 ~l~YTg~~~~~~~~q~~A~s-~D~~-d~~l~~w~k~~~n--P--vi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~-- 213 (587)
||+|.+.. ..+.+|.. .|.. -..+..|+....+ + +.... .....+--|.+ ++ .+|+|||++.+.
T Consensus 141 Yl~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~--~~~~~~EgP~i-~k-~~g~yYL~~s~~~~ 212 (318)
T 1gyh_A 141 WMSFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQ--AGSAQIEAPFI-LR-KGDYYYLFASWGLC 212 (318)
T ss_dssp EEEECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTS--CCSCCEEEEEE-EE-ETTEEEEEEEESCC
T ss_pred EEEeeccC----CCEEEEEeCCccccccceeecceecccCcceeecccC--CCCcceeccEE-EE-ECCEEEEEEEeCCC
Confidence 99997532 22445543 3420 0012456543111 1 11111 11234667884 55 589999998763
Q ss_pred ---eCCcceEEEEEeCCCC-CCEEc-cccCc
Q 007857 214 ---IDNEGMAFVYWSWDFI-HWTKL-DHPLY 239 (587)
Q Consensus 214 ---~~~~G~~~ly~S~Dl~-~W~~~-~~~~~ 239 (587)
....-++.+++|+++. -|+.. +.++.
T Consensus 213 ~~g~~~~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 213 CRKGDSTYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp SCGGGCCCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred cCCCCCcceEEEEEcCCCCCCCCcCCCCEee
Confidence 1222257789999875 57765 34443
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3.2e-05 Score=79.38 Aligned_cols=155 Identities=13% Similarity=0.206 Sum_probs=92.3
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC---cc---cEeccCCCCCCCccCCCCeEeeeEEEccCCeE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL---IN---WIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl---v~---W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~ 141 (587)
-.|. +++++|+|||||..+..+. + ....|+|+|+|+ -. |++.+..+.+.. .+......++++.++||+.
T Consensus 83 wAP~-v~~~~g~yylyyt~~~~~~--~-~~~igva~s~~~dP~gp~~~w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG~~ 157 (314)
T 3cu9_A 83 WAPD-ICFYNGIYYLYYSVSTFGK--N-TSVIGLATNQTLDPRDPDYEWKDMGPVIHSTA-SDNYNAIDPNVVFDQEGQP 157 (314)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTC--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECT-TSSSCCCSCEEEECTTSCE
T ss_pred ecCc-EEEECCEEEEEEEeccCCC--C-CceEEEEEeCCCCCCCCCcCcccCCeEecCCC-CCCCCccCCCeEEcCCCCE
Confidence 3455 7788999999999875432 2 467899999984 23 998755333211 1223467899988779999
Q ss_pred EEEEeeecCCCceeEEEEEec-CCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----C
Q 007857 142 FILYTGIDASGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----D 215 (587)
Q Consensus 142 ~l~YTg~~~~~~~~q~~A~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~ 215 (587)
||+|.+.. ..+.++..+ |.+.+. ..++. ..+...+. ....+.-|.+ ++ .+|+|||++.+.. .
T Consensus 158 Yl~~g~~~----~~i~~~~l~~d~~~~~-~~~~~---~~~~~~~~--~~~~~EgP~i-~k-~~G~yyL~~s~~~~~~g~~ 225 (314)
T 3cu9_A 158 WLSFGSFW----SGIQLIQLDTETMKPA-AQAEL---LTIASRGE--EPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIE 225 (314)
T ss_dssp EEEECBST----TCEEEEECCTTTCSCC-TTCCC---EEEECCSS--SSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGG
T ss_pred EEEEeccC----CcEEEEEECcccCccc-CCCce---EEecccCC--CCCccCccEE-EE-ECCEEEEEEEcCCcccCCC
Confidence 99998642 124455433 322110 01110 01111111 1234678885 45 4899999987531 1
Q ss_pred CcceEEEEEeCCCC-CCEEc-cccCc
Q 007857 216 NEGMAFVYWSWDFI-HWTKL-DHPLY 239 (587)
Q Consensus 216 ~~G~~~ly~S~Dl~-~W~~~-~~~~~ 239 (587)
..-++.+++|+++. -|+.. +.++.
T Consensus 226 ~~y~~~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 226 STYKIAVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp CCCEEEEEEESSTTSCCBCTTSCBGG
T ss_pred CcceEEEEEeCCCCCCCCcCCCCccc
Confidence 12257788999976 68765 44543
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=5.8e-05 Score=77.38 Aligned_cols=141 Identities=7% Similarity=-0.014 Sum_probs=89.8
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEec-cC-CCCCC----CccCCCCeEeeeEEEccCCeE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SH-ALCPS----GPYDINSCWSGSVTILPGDKP 141 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~-~~-al~P~----~~~d~~Gv~SGsav~~~dg~~ 141 (587)
-|. +++++|+|||||..+..+..+ ....++|+|+|.. .|++. +. .+... ... .....++++++++||+.
T Consensus 77 AP~-i~~~~Gkyylyyt~~~~~~~~--~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~-~~~~iDp~vf~DddG~~ 152 (307)
T 3qee_A 77 ASQ-VIERNGKFYWYVTVRHDDTKP--GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPI-DWDDIDPSVFIDDDGQA 152 (307)
T ss_dssp EEE-EEEETTEEEEEEEEEECTTSC--SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCC-SCCSCCCEEEECTTSCE
T ss_pred Cce-EEEECCEEEEEEEeccCCCCC--ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCC-CcCcccCceEECCCCCE
Confidence 465 788999999999977544332 3678999999954 89983 43 23211 111 12367899988778999
Q ss_pred EEEEeeecCCCceeEEEE-EecCCCCCccceeeeecCCcE-EcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcce
Q 007857 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPV-MTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219 (587)
Q Consensus 142 ~l~YTg~~~~~~~~q~~A-~s~D~~d~~l~~w~k~~~nPv-i~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~ 219 (587)
||+|.+.. ..++ .+.|. .+|... ++ |..+ ...+.-|. +++ .+|+|||++++.. .-+
T Consensus 153 Yl~~g~~~------i~~~~l~~d~-----~~~~g~---~~~i~~~----~~~~EgP~-i~k-~~g~YyL~~s~~~--~~~ 210 (307)
T 3qee_A 153 YLFWGNTR------PRYAKLKKNM-----VELDGP---IRAIEGL----PEFTEAIW-VHK-YQDNYYLSYAMGF--PEK 210 (307)
T ss_dssp EEEECSSS------CEEEEECTTS-----SSEEEE---EEECCCC----TTEEEEEE-EEE-CC-CEEEEEEETT--TTE
T ss_pred EEEEeCCc------EEEEEECCcc-----ccccCc---eEEeCCC----CCccCceE-EEE-ECCEEEEEEECCC--CcE
Confidence 99996531 2233 34454 456532 22 2211 12356788 456 6899999998742 235
Q ss_pred EEEEEeCCCC-CCEEcc
Q 007857 220 AFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 220 ~~ly~S~Dl~-~W~~~~ 235 (587)
+.+.+|+++. -|+..+
T Consensus 211 ~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 211 IGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp EEEEEESSTTCCCEEEE
T ss_pred EEEEECCCCCCCcEECC
Confidence 6778999986 788764
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=0.0001 Score=80.03 Aligned_cols=156 Identities=12% Similarity=0.202 Sum_probs=96.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEE--eCCC--cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSV--SYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~--S~Dl--v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-.|. ++|++|+|||||.....+..+ ....+.|+ |+|- -.|++++..+.|.. ..+.+++++. +||++|
T Consensus 76 ~WAP~-v~~~~Gkyylyys~~~~~~~~--~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~~Y 147 (468)
T 3akh_A 76 IWAPE-IHFIDGKWYVYFAAGSTSDVW--AIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGVRH 147 (468)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCTT--CCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTEEE
T ss_pred Eecce-EEEECCEEEEEEEeECCCCCC--ceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCEEE
Confidence 44565 788999999999876533222 35567775 8886 48999876565532 3478999988 699999
Q ss_pred EEEeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEE-cCC-CCCCC---CCccCCeEEeecCCCeEEEEEeeeeC
Q 007857 143 ILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQID 215 (587)
Q Consensus 143 l~YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-~~p-~~~~~---~~fRDP~V~w~~~~g~~~m~~g~~~~ 215 (587)
|+|.+... ...+.+.+|..++. .+.. +.|+. ..| ..++. .-..-|++ ++ .+|+|||++++...
T Consensus 148 l~~g~~~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~~~we~~g~~~~EGP~i-~k-~~G~YYL~ys~~g~ 217 (468)
T 3akh_A 148 LAWAQRNPAEDNNTSLFIAKMANP-----WTIS---GTPTEISQPTLSWETVGYKVNEGPAV-IQ-HGGKVFLTYSASAT 217 (468)
T ss_dssp EEEEECCTTSSSSBEEEEEEEEET-----TEEE---EEEEEEECCCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESCS
T ss_pred EEEEccCCCCCCCCcEEEEEeCCC-----ceec---CccEEecCCCcccccCCCccccCCEE-EE-ECCEEEEEEEeCCC
Confidence 99986532 12345566655543 2222 23332 222 12221 23467884 45 58999999876431
Q ss_pred Ccc-eEEEEEeC---CCCC---CEEccccCcc
Q 007857 216 NEG-MAFVYWSW---DFIH---WTKLDHPLYS 240 (587)
Q Consensus 216 ~~G-~~~ly~S~---Dl~~---W~~~~~~~~~ 240 (587)
..+ ++.+.+|+ ++.. |+..+.++..
T Consensus 218 ~~~y~v~~a~s~~~~~~~gP~~w~~~~~pvl~ 249 (468)
T 3akh_A 218 DANYCLGMLSASASADLLNAASWTKSSQPVFK 249 (468)
T ss_dssp STTCEEEEEEEETTSCTTSGGGCEECSSCSBC
T ss_pred CCCceEEEEEECCCCCCCCcHHhccCCceEEE
Confidence 122 56778886 6664 9887655543
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00027 Score=78.08 Aligned_cols=147 Identities=12% Similarity=0.098 Sum_probs=91.3
Q ss_pred ccCCCcceEECCEEEEEEEECC-CCCCCCCCceEEEEEeCCCcc-cEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNP-LGPLFGDKMIWAHSVSYDLIN-WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P-~~~~~g~~~~Wgha~S~Dlv~-W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
+--|. ++|++|+|||||.... .+..+. ....++|+|+|... |++ |+.+. ...++++++.++||+.||+
T Consensus 72 ~WAP~-i~~~~g~~yly~t~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~~-------~~~iDp~~f~DddG~~Yl~ 141 (538)
T 3c2u_A 72 IWAPD-LSYADGKFWLIYTDVKVVDGMWK-DCHNYLTTAEDIKGPWSK-PILLN-------GAGFDASLFHDPSGKKYLV 141 (538)
T ss_dssp ECSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTCCCCC-CEEEE-------CSCSCCEEEECTTSCEEEE
T ss_pred EECCe-EEEECCEEEEEEEeccCCCCCcc-cccEEEEEECCCCCCccc-cEecC-------CCcCCCeeEECCCCCEEEE
Confidence 45676 8899999999998532 222233 46789999999874 986 33231 1246888988778999999
Q ss_pred EeeecC--C--CceeEEEEEe-cCCCCCccceeeeecCCc-EEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 145 YTGIDA--S--GQQVQNLAMP-ENLSDPLLKDWVKFSGNP-VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 145 YTg~~~--~--~~~~q~~A~s-~D~~d~~l~~w~k~~~nP-vi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|..... . ....+.++.. .|. ++ ..+.+ +|..+.+ .....-|++ ++ .+|+|||++++.....+
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~l~~d~-------~~-~~g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~ 209 (538)
T 3c2u_A 142 NMYWDQRVYHHNFYGIALQEYSVAE-------EK-LIGKPEIIYKGTD--IAYTEGPHL-YY-INDMYYLMTAEGGTTYQ 209 (538)
T ss_dssp EEEECCCTTSCSEEEEEEEEEETTT-------TE-ECSCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEecCCccCCCCCCCEEEEEECCcc-------CC-CCCCCEEEecCCC--CCccccceE-EE-ECCEEEEEEecCCCCCC
Confidence 985432 1 1234455543 332 11 11222 2222211 234667884 55 58999999976432222
Q ss_pred -eEEEEEeCCCC-CCEEcc
Q 007857 219 -MAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 219 -~~~ly~S~Dl~-~W~~~~ 235 (587)
++.+++|+++. -|+...
T Consensus 210 ~~~~~~rS~s~~GP~~~~~ 228 (538)
T 3c2u_A 210 HSETIARSKTIHGPYEIQP 228 (538)
T ss_dssp CEEEEEEESSTTCCCEECT
T ss_pred eEEEEEEECCCCCCCccCC
Confidence 57789999986 788764
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00038 Score=76.70 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=94.3
Q ss_pred CCccCCCcceEECCEEEEEEEEC-CCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYN-PLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~-P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+--|. ++|++|+|||||... ..+..|. ..+.+.|+|+|.. .|++ |+.+ .. ..++++++.++||+.|
T Consensus 70 ~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~D~dG~~Y 139 (533)
T 1yif_A 70 GGVWAPC-LSYSDGKFWLIYTDVKVVDGAWK-DCHNYLVTCETINGDWSE-PIKL-NS------SGFDASLFHDTDGKKY 139 (533)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCEE
T ss_pred CCEECce-EEEECCEEEEEEEeccCCCCCcc-cccEEEEEeCCCCCCccc-cEEc-CC------CcCCCceEECCCCCEE
Confidence 3355676 889999999999853 3233344 4678999999986 7986 3333 11 2467889887899999
Q ss_pred EEEeeecC-C---CceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 143 ILYTGIDA-S---GQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 143 l~YTg~~~-~---~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
|+|.+... . ....+.++. +.|. .+... +...|+... + ....--|++ ++ .+|+|||++.+.....
T Consensus 140 l~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~-~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~ 208 (533)
T 1yif_A 140 LLNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGT-D--RKLTEAPHL-YH-IGNYYYLLTAEGGTRY 208 (533)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCC-T--TCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCC-C--CCccccceE-EE-ECCEEEEEEeCCCCCC
Confidence 99985431 1 123444553 4443 11111 112233221 1 234567884 55 5899999997643222
Q ss_pred c-eEEEEEeCCCC-CCEEcc-ccCc
Q 007857 218 G-MAFVYWSWDFI-HWTKLD-HPLY 239 (587)
Q Consensus 218 G-~~~ly~S~Dl~-~W~~~~-~~~~ 239 (587)
+ .+.+++|+++. -|+... .|+.
T Consensus 209 ~~~v~~~rs~s~~GP~~~~~~~pil 233 (533)
T 1yif_A 209 EHAATIARSANIEGPYEVHPDNPIL 233 (533)
T ss_dssp TCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CeEEEEEEECCCCceeeeCCCCceE
Confidence 2 57788999876 688764 3443
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00014 Score=80.06 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=90.9
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccC--CCCCCCccC----CCCeEeeeEEEccCC
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSH--ALCPSGPYD----INSCWSGSVTILPGD 139 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~--al~P~~~~d----~~Gv~SGsav~~~dg 139 (587)
-|. ++|+ +|+|||||.... +..++ ..+.|+|+|+|.. .|+..+. .+......| ...+.++++++++||
T Consensus 119 AP~-v~~~~~~Gkyymy~~~~~-~~~~~-~~~igvats~~p~Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~D~dG 195 (526)
T 3vsf_A 119 RPK-VMYNASTGEFVMWMHWEN-GINYG-QARAAVAYSKTPDGKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFVDTDG 195 (526)
T ss_dssp EEE-EEECTTTCCEEEEEEEEC-SSCSC-CCEEEEEEESSSSSCCEEEEEECSSCTTCCEETTEESCCCCSEEEEECTTS
T ss_pred CCE-EEEECCCCEEEEEEEeeC-CCCCC-cceEEEEEcCCCCCCCEeccccccccccccccCCCCCcccccccEEECCCC
Confidence 344 6665 899999998762 22345 6789999999987 8997642 111111111 234678999888899
Q ss_pred eEEEEEeeecCCCceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc-
Q 007857 140 KPFILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE- 217 (587)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~~A~s-~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~- 217 (587)
+.||+|.+... ....++.. .|. ..+... +....+ ......|+ +++ .+|+|||++.......
T Consensus 196 ~~Yl~~~~~~~---~~i~i~~l~~d~-----~~~~~~---~~~~~~----g~~~EgP~-i~k-~~G~YYL~~S~~tg~~~ 258 (526)
T 3vsf_A 196 KGYFISAANEN---MDLHLYELTPDY-----KNIASL---KAKLFV----GQQREAPC-LIK-RNGYYYLITSGCTGWNP 258 (526)
T ss_dssp CEEEEEEETTT---TEEEEEEECTTS-----SSEEEE---EEEEST----TSCCEEEE-EEE-SSSCEEEEEECCCTTSC
T ss_pred CEEEEEEecCC---CceEEEEcCCCc-----ccccCc---eEEeCC----CCCcCCeE-EEE-ECCEEEEEEcCCCCcCC
Confidence 99999986421 23344433 333 334332 221111 13456899 456 5899999997543211
Q ss_pred ceEEEEEeCCCC-CCEEcccc
Q 007857 218 GMAFVYWSWDFI-HWTKLDHP 237 (587)
Q Consensus 218 G~~~ly~S~Dl~-~W~~~~~~ 237 (587)
-.+.+++|+++. -|+..+.+
T Consensus 259 ~~~~~a~S~s~~GPw~~~~~~ 279 (526)
T 3vsf_A 259 NQAKYAYSKDLASGWSQLYNL 279 (526)
T ss_dssp CCEEECEESCSSSCCCCCEEE
T ss_pred CceEEEEeCCCCCCceeCCcc
Confidence 146788998876 57665443
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00028 Score=77.67 Aligned_cols=148 Identities=15% Similarity=0.068 Sum_probs=91.2
Q ss_pred ccCCCcceEECCEEEEEEEECC-CCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNP-LGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P-~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
+-.|. ++|++|+|||||.... .+..+. ..+.++|+|+|.. .|++ |..+ ....++++++.++||+.||+
T Consensus 74 ~wAP~-i~~~~g~~yl~yt~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl~ 143 (528)
T 1yrz_A 74 IWAPC-LSYHDGTFYLIYTDVKQWHGAFK-DAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWLV 143 (528)
T ss_dssp ECSCE-EEEETTEEEEEEEEEEECSSSCC-EEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEEE
T ss_pred EECCe-EEEECCEEEEEEecccCCCCCcc-cceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEEE
Confidence 45676 8889999999998532 122233 4568899999987 5986 3323 12357899988779999999
Q ss_pred EeeecC-C---CceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc-
Q 007857 145 YTGIDA-S---GQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG- 218 (587)
Q Consensus 145 YTg~~~-~---~~~~q~~A~s-~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G- 218 (587)
|..... . ....+.++.. .|. .+.... ...|+... ....+--|++ ++ .+|+|||++.+.....+
T Consensus 144 ~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~~g~~~~~ 212 (528)
T 1yrz_A 144 NMIWDYRKGNHPFAGIILQEYSEAE-----QKLVGP-VKNIYKGT---DIQLTEGPHL-YK-KDGYYYLLVAEGGTEYEH 212 (528)
T ss_dssp EEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EeeccCCCCCCCCCeEEEEEECCcc-----CCCCCC-CEEEEcCC---CCCccCCCEE-EE-ECCEEEEEEeCCCCCCCc
Confidence 654321 1 1234555543 332 222211 12333221 1234668884 55 58999999976432122
Q ss_pred eEEEEEeCCCC-CCEEcc
Q 007857 219 MAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~~ 235 (587)
.+.+++|+++. -|+...
T Consensus 213 ~~~~~rs~~~~GP~~~~~ 230 (528)
T 1yrz_A 213 AATLARSQSIDGPYETDP 230 (528)
T ss_dssp EEEEEEESSTTCCCEECT
T ss_pred EEEEEEECCCCCCCCcCC
Confidence 47788999987 798863
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00086 Score=73.92 Aligned_cols=150 Identities=12% Similarity=0.049 Sum_probs=91.3
Q ss_pred CCccCCCcceEECCEEEEEEEECC-CCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNP-LGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P-~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+--|. ++|++|+|||||.... .+..+. ..+.++|+|+|.. .|++ |+.+. ....+++++.++||+.|
T Consensus 71 ~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~-~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Y 140 (535)
T 2exh_A 71 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWK-DGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKY 140 (535)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCcc-ccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEE
Confidence 3355676 8899999999998532 222233 4678999999976 6986 33231 13478899887799999
Q ss_pred EEEeeecC-C---CceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 143 ILYTGIDA-S---GQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 143 l~YTg~~~-~---~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
|+|..... . ....+.++. +.|. .+.... ...|+.+. + .....-|++ ++ .+|+|||++++.....
T Consensus 141 l~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~~~-~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~~ 209 (535)
T 2exh_A 141 LVNMYWDHRVDHHPFYGIVLQEYSVEQ-----KKLVGE-PKIIFKGT-D--LRITEGPHL-YK-INGYYYLLTAEGGTRY 209 (535)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECCC-T--TCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEEecCCccCCCCCCcEEEEEECCcc-----CCCCCC-cEEEEcCC-C--CCccccceE-EE-ECCEEEEEEeCCCCCC
Confidence 99985432 1 123344553 3342 111111 12333321 1 234567884 55 4899999997643222
Q ss_pred c-eEEEEEeCCCC-CCEEcc
Q 007857 218 G-MAFVYWSWDFI-HWTKLD 235 (587)
Q Consensus 218 G-~~~ly~S~Dl~-~W~~~~ 235 (587)
+ .+.+++|+++. -|+...
T Consensus 210 ~~~~~~~rs~s~~GP~~~~~ 229 (535)
T 2exh_A 210 NHAATIARSTSLYGPYEVHP 229 (535)
T ss_dssp TCEEEEEEESSTTCCCEECT
T ss_pred CeEEEEEEeCCCCCCCccCC
Confidence 2 47788999876 687764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00014 Score=79.29 Aligned_cols=147 Identities=14% Similarity=0.140 Sum_probs=90.4
Q ss_pred CCCcceEE--C--CEEEEEEEECCCCCCCCCCceEEEEEeCCCcc-cEec-c-CCCCCCCc-cC-CCCeEeeeEEEccCC
Q 007857 69 DPNGPMYY--K--GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHL-S-HALCPSGP-YD-INSCWSGSVTILPGD 139 (587)
Q Consensus 69 DPnG~~~~--~--G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~-W~~~-~-~al~P~~~-~d-~~Gv~SGsav~~~dg 139 (587)
.|. ++|+ + |+|||||... ....++|+|+|... |++. + +.+.++.+ .+ .....++++++++||
T Consensus 102 AP~-v~~~~~~g~g~yylyyt~~--------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG 172 (487)
T 3c7f_A 102 APS-IAVKKINGKDKFFLYFANS--------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDG 172 (487)
T ss_dssp EEE-EEEEEETTEEEEEEEEEST--------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTS
T ss_pred chh-eEEEecCCCCeEEEEEEcC--------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCC
Confidence 454 6666 4 6999999632 24589999999985 9974 3 22332211 11 124689999998899
Q ss_pred eEEEEEeeecCC----------CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEE
Q 007857 140 KPFILYTGIDAS----------GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 140 ~~~l~YTg~~~~----------~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
+.||+|.+.... ..+...+| .+.|. .+|.... ..|..| ..+.-|.+ ++ .+|+|||
T Consensus 173 ~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-----~~~~g~~--~~i~~p-----~~~Egp~i-~k-~~G~YYl 238 (487)
T 3c7f_A 173 TGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDM-----TSVVGSA--STIDAP-----FMFEDSGL-HK-YNGTYYY 238 (487)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTS-----SSEEEEE--EEECCT-----TEEEEEEE-EE-ETTEEEE
T ss_pred CEEEEECCcccCccccccccccCCCceEEEEECCCe-----eeccCcc--EEecCC-----ceEecceE-EE-ECCEEEE
Confidence 999999863211 11234455 45554 6776421 123222 23567884 45 5899999
Q ss_pred EEeeee--C-----CcceEEEEEeCCCC-CCEEccccC
Q 007857 209 LVGGQI--D-----NEGMAFVYWSWDFI-HWTKLDHPL 238 (587)
Q Consensus 209 ~~g~~~--~-----~~G~~~ly~S~Dl~-~W~~~~~~~ 238 (587)
++.+.. . ....+.+++|+++. -|++.+.++
T Consensus 239 ~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il 276 (487)
T 3c7f_A 239 SYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFL 276 (487)
T ss_dssp EEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEE
T ss_pred EEECCCCCCcccCCCCceeEEEEcCCCCCCceECceec
Confidence 876642 1 12357788999876 688875433
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0001 Score=79.08 Aligned_cols=139 Identities=12% Similarity=0.159 Sum_probs=89.7
Q ss_pred ceE--ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 73 PMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 73 ~~~--~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
++| ++|+|||||..+..+ .+ ....|.|+|++.. .|+..++.+..+.++ +.+++++++++||+.||+|.+.
T Consensus 90 V~y~~~dGkYYLyyt~~~~~--~~-~~~igVAtSdsP~GPwt~~gpl~~~g~~~---~~IDPsvF~DdDGk~YL~~g~~- 162 (441)
T 3nqh_A 90 VMKCPSTGEYVMYMHADDMN--YK-DPHIGYATCSTIAGEYKLHGPLLYEGKPI---RRWDMGTYQDTDGTGYLLLHGG- 162 (441)
T ss_dssp EEECTTTCCEEEEEEEEETT--SC-SCEEEEEEESSTTSCCEEEEECEETTEEC---CCCSEEEEECTTSCEEEEEGGG-
T ss_pred eEEEccCCEEEEEEEeCCCC--CC-cceEEEEEeCCCCCCceEcceeecCCCcc---cccCceEEEeCCCCEEEEeCCC-
Confidence 666 599999999876432 23 5789999999965 899876544333221 3578999998899999999642
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC-cceEEEEEeCCC
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN-EGMAFVYWSWDF 228 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~-~G~~~ly~S~Dl 228 (587)
. ....+.|. .++... ++.-.++ ....-|+ +++ .+|+|||+++..... ...+.+++|+++
T Consensus 163 -----~-I~eLs~D~-----~~~~g~---~~~i~~g----~~~EgP~-i~K-~~G~YYL~~S~~~g~~~~~~~~arS~s~ 222 (441)
T 3nqh_A 163 -----I-VYRLSKDY-----RTAEEK---VVSGVGG----SHGESPA-MFK-KDGTYFFLFSNLTSWEKNDNFYFTAPSV 222 (441)
T ss_dssp -----E-EEEECTTS-----SSEEEE---EESCSTT----CCCEEEE-EEE-ETTEEEEEEECSCTTSCCCCEEEEESST
T ss_pred -----c-EEEeCCcc-----ccccCc---eEEeCCC----CceECcE-EEE-ECCEEEEEEeCCCCcCCCceEEEEeCCC
Confidence 1 12334454 455432 2211111 2456888 456 589999999764211 113568899987
Q ss_pred C-CCEEccccC
Q 007857 229 I-HWTKLDHPL 238 (587)
Q Consensus 229 ~-~W~~~~~~~ 238 (587)
. -|+..+.++
T Consensus 223 ~GPw~~~g~i~ 233 (441)
T 3nqh_A 223 KGPWTRQGLFA 233 (441)
T ss_dssp TCCCEEEEESS
T ss_pred CCCceECCccC
Confidence 6 688876544
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00021 Score=78.70 Aligned_cols=138 Identities=14% Similarity=0.219 Sum_probs=91.0
Q ss_pred EeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCc
Q 007857 103 VSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNP 179 (587)
Q Consensus 103 ~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nP 179 (587)
.|.++.+|.+..--+.|...| +=++..++..+|+++|||.-+... +...-++|+|+|+ +||+..+ +
T Consensus 10 ~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DL-----vhW~~~p--~ 78 (546)
T 3ugf_A 10 WSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL-----IHWLYLP--L 78 (546)
T ss_dssp CCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSS-----SSCEECC--C
T ss_pred cchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCc-----CccccCC--C
Confidence 467899999988888887543 234444444699999999976432 3356689999997 8999863 6
Q ss_pred EEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-CcceEEEEEeCCC-----CCCEEcc-ccCccCCCC---Ccccc
Q 007857 180 VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVYWSWDF-----IHWTKLD-HPLYSVQET---GMWEC 249 (587)
Q Consensus 180 vi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G~~~ly~S~Dl-----~~W~~~~-~~~~~~~~~---~~wEC 249 (587)
+|.+...++....-.+.++.. .+|+++|++.+... ..-...+..|+|+ .+|+... .|+...+.+ .-+.-
T Consensus 79 AL~P~~~~D~~G~~SGSavv~-~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRD 157 (546)
T 3ugf_A 79 ALAADQWYDMQGVFSGSATCL-PDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRD 157 (546)
T ss_dssp CBCSCSGGGTTCEEEEEEEEC-TTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCC
T ss_pred CCCCCcccccCCcCcceEEEe-eCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeec
Confidence 665543344445556665433 58899999977542 2233567788885 8999864 355433222 24677
Q ss_pred CeE
Q 007857 250 PDI 252 (587)
Q Consensus 250 Pdl 252 (587)
|..
T Consensus 158 PkV 160 (546)
T 3ugf_A 158 AST 160 (546)
T ss_dssp BCC
T ss_pred cce
Confidence 773
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00053 Score=74.00 Aligned_cols=128 Identities=14% Similarity=0.258 Sum_probs=82.7
Q ss_pred ECCEEEEEEEECCCCCCCCC------CceEE------EEEeCC---CcccEeccCCCCCCCcc-C------CCCeEeeeE
Q 007857 76 YKGVYHLFYQYNPLGPLFGD------KMIWA------HSVSYD---LINWIHLSHALCPSGPY-D------INSCWSGSV 133 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~~~~g~------~~~Wg------ha~S~D---lv~W~~~~~al~P~~~~-d------~~Gv~SGsa 133 (587)
.+|+|||||...-+....++ ..... |+ ++| |.+|+.+++.+.+++.+ + ....-.+.+
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a-~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 251 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHA-DFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFT 251 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEE-CSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceec-cCCCccccccccCCceeecCccccccccccCCccccCCEE
Confidence 58999999986533211110 13345 33 344 67999888878887532 2 234568888
Q ss_pred EEcc--CCeEEEEEeeecCCC----------------------------------ceeEEEEEecCCCCCccceeeeecC
Q 007857 134 TILP--GDKPFILYTGIDASG----------------------------------QQVQNLAMPENLSDPLLKDWVKFSG 177 (587)
Q Consensus 134 v~~~--dg~~~l~YTg~~~~~----------------------------------~~~q~~A~s~D~~d~~l~~w~k~~~ 177 (587)
+.++ ||+.||++.++.... ...++||.+++. .+..|+-.
T Consensus 252 f~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~-- 326 (493)
T 1w18_A 252 FEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL-- 326 (493)
T ss_dssp EECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--
Confidence 8875 399999999865321 235566877643 13789865
Q ss_pred CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 178 nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
.|++..+.. ...+.-|.|+. .+|+|||+...+
T Consensus 327 ~PL~~a~~v--~deiErP~V~~--~~GkyYLFtSs~ 358 (493)
T 1w18_A 327 SPLISANCV--NDQTERPQVYL--HNGKYYIFTISH 358 (493)
T ss_dssp EEEEECTTT--BSCCEEEEEEE--ETTEEEEEEEEC
T ss_pred CccccCCCC--CCcEECCeEEE--ECCEEEEEEEcc
Confidence 488876532 35667788654 489999998765
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00054 Score=74.44 Aligned_cols=158 Identities=11% Similarity=0.073 Sum_probs=93.0
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCC--------CccC---CCCeEeeeE
Q 007857 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPS--------GPYD---INSCWSGSV 133 (587)
Q Consensus 67 ~nDPnG~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~--------~~~d---~~Gv~SGsa 133 (587)
+-.|. +++ ++|+|||||.....+. + ....++|+|+|.. .|++++..|.+. ..|+ ...+.++++
T Consensus 99 ~WAP~-vi~~~dGkyylyys~~~~~~--~-~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~v 174 (470)
T 2x8s_A 99 LWAAD-VTQLADGKYYMYYNACRGDS--P-RSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHT 174 (470)
T ss_dssp CCCCE-EEECTTSCEEEEEEEECSSS--C-CEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEE
T ss_pred eECCe-EEEecCCEEEEEEEeccCCC--C-ccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCE
Confidence 44565 667 4899999998765432 2 5679999999998 699886544321 1222 235678999
Q ss_pred EEccCCeEEEEEeeecCCCceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEee
Q 007857 134 TILPGDKPFILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~~A~s-~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
++++||+.||+|.+... .+.++.. .|.+.+ ..+... ...+... ......-|+++.+..+|+|||+++.
T Consensus 175 f~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g----~~~~~EGP~i~~~K~~G~YYL~~S~ 243 (470)
T 2x8s_A 175 FFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGG----NHSRIEGPYVLYNPDTQYYYLYLSY 243 (470)
T ss_dssp EECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECC----SSCSEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCC----CCCceeccEEEEEccCCEEEEEEEe
Confidence 98889999999976431 2334433 222211 111100 1122211 1123557885443468999999876
Q ss_pred ee-C--CcceEEEEEeCCCC-CCEE-ccccCc
Q 007857 213 QI-D--NEGMAFVYWSWDFI-HWTK-LDHPLY 239 (587)
Q Consensus 213 ~~-~--~~G~~~ly~S~Dl~-~W~~-~~~~~~ 239 (587)
.. . ..-++.+++|+++. -|+. .+.++.
T Consensus 244 g~~~~~~~y~v~~arS~s~~GP~~~~~g~pl~ 275 (470)
T 2x8s_A 244 GGLDATGGYNIRVARSKKPDGPYYDAEGNPML 275 (470)
T ss_dssp SBSSTTSBCEEEEEEESSTTCCCBCTTCCBGG
T ss_pred CCCCCCCCceEEEEEECCCCCCCCcCCCCccc
Confidence 43 1 11257788999875 5763 334443
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0043 Score=63.72 Aligned_cols=154 Identities=15% Similarity=0.206 Sum_probs=80.5
Q ss_pred CCcceEECCEEEEEEEECCCCCCCCC-CceEEEEE-eCCC----cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 70 PNGPMYYKGVYHLFYQYNPLGPLFGD-KMIWAHSV-SYDL----INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 70 PnG~~~~~G~YHlfyQ~~P~~~~~g~-~~~Wgha~-S~Dl----v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
|. ++|+||+|||||...+.+..... ..+-.+++ ++.. -.|+..+....+. .....+++++.+ ||+.++
T Consensus 77 P~-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~----~~~~IDp~vf~D-dd~~~~ 150 (330)
T 3k1u_A 77 PE-IHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAW----ESFSLDATIFEH-NEKLYY 150 (330)
T ss_dssp EE-EEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSS----CSCEEEEEEEEE-TTEEEE
T ss_pred CE-EEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCC----CCCccCceEEEE-CCccEE
Confidence 54 78899999999987665432210 11222333 2222 2577654322221 134688999886 666666
Q ss_pred EEeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEE-cCC-CCCCC---CCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 144 LYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 144 ~YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-~~p-~~~~~---~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+|.+... ...+.+.++-.++. . + ..+.|+. ..+ ..++. .-..-|++ ++ .+|+|||++++....
T Consensus 151 ~~~~~~~~~~~~~~i~i~~l~~~-----~--~-~~g~~~~i~~~~~~~e~~~~~~~EGp~i-~k-~~G~YYL~ys~~~~~ 220 (330)
T 3k1u_A 151 VWAQQDINIKGHSNIYIAEMENP-----W--T-LKTKPVMLTKPELEWEIKGFWVNEGPAV-LK-KNGKIFITYSASATD 220 (330)
T ss_dssp EEEECCTTSSSSBEEEEEEEEET-----T--E-ECSCCEEEECSCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESCSS
T ss_pred EEeecCCCcCCCceEEEEECCCC-----c--c-ccCCcEEecCCCccccccCCceeeCCEE-EE-ECCEEEEEEEeCCCC
Confidence 6655432 23344555544332 1 1 1233433 222 11111 22357884 45 589999998765321
Q ss_pred cc-eEEEEEeCCCC------CCEEccccCc
Q 007857 217 EG-MAFVYWSWDFI------HWTKLDHPLY 239 (587)
Q Consensus 217 ~G-~~~ly~S~Dl~------~W~~~~~~~~ 239 (587)
.+ ++.+++|+... .|+..+.++.
T Consensus 221 ~~y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 221 VNYCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp TTCEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred CCceEEEEEECCCCCCCCCccccccCCCEE
Confidence 22 46677776543 3776655443
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0031 Score=67.64 Aligned_cols=146 Identities=12% Similarity=0.206 Sum_probs=92.0
Q ss_pred ceE-ECCEEEEEEEECCCCCCCCCCceEEEEE-----eCC---CcccEeccCCCCCCCc-c---------------CCCC
Q 007857 73 PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSV-----SYD---LINWIHLSHALCPSGP-Y---------------DINS 127 (587)
Q Consensus 73 ~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~-----S~D---lv~W~~~~~al~P~~~-~---------------d~~G 127 (587)
.+. .+|++||||..+-... -. .....+|+ |+| +..|+...+.+.++.. | +...
T Consensus 141 Ai~~~dG~i~LfYTg~~~~~-~~-~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~ 218 (447)
T 1oyg_A 141 ATFTSDGKIRLFYTDFSGKH-YG-KQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHT 218 (447)
T ss_dssp EEECTTSCEEEEEEEEEGGG-TT-EEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCC
T ss_pred eEECcCCEEEEEEEeecCCC-CC-ceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccc
Confidence 344 5999999999753321 11 35677777 578 4566666777777642 1 1234
Q ss_pred eEeeeEEEccCCeEEEEEeeecCCC-----------------------------------------ceeEEEEE-ecCCC
Q 007857 128 CWSGSVTILPGDKPFILYTGIDASG-----------------------------------------QQVQNLAM-PENLS 165 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~~A~-s~D~~ 165 (587)
.-.+-++.+ +|+++|+..+..... ...++++. |.|.
T Consensus 219 fRDP~Vf~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~Dl- 296 (447)
T 1oyg_A 219 LRDPHYVED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDY- 296 (447)
T ss_dssp CEEEEEEEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTS-
T ss_pred cCCCeEEeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCCC-
Confidence 567877764 899999998875421 12455563 5554
Q ss_pred CCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-C-------cce-EEEEEeCCCC-CCE
Q 007857 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-N-------EGM-AFVYWSWDFI-HWT 232 (587)
Q Consensus 166 d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~-------~G~-~~ly~S~Dl~-~W~ 232 (587)
..|+-. .|++.+.. . ...+.-|.+ ++ .+|+|||++..+.. . .+. ++.|.|+.|. -|+
T Consensus 297 ----~~W~~~--~pL~~~~~-v-~d~~EcPdl-fk-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 297 ----TLKKVM--KPLIASNT-V-TDEIERANV-FK-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp ----SEEEEE--EEEEECTT-T-CSCCEEEEE-EE-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred ----CCceEc--cccccCCC-C-CCceEcCcE-EE-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 789764 47776532 1 235778985 44 58999999887641 1 123 3467999885 454
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0056 Score=67.60 Aligned_cols=116 Identities=16% Similarity=0.269 Sum_probs=73.3
Q ss_pred eEeeeEEEccCCeEEEEEeeecCC---Cc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC
Q 007857 128 CWSGSVTILPGDKPFILYTGIDAS---GQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~---~~-~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~ 203 (587)
+-.+..++..+|+++|||..+... +. ..-++|+|+|+ +||+.. .|+|.+...++....-.+.++.. .+
T Consensus 20 ~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~Gv~SGsav~~-~d 91 (543)
T 1st8_A 20 MNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDL-----VNWIHL--DPAIYPTQEADSKSCWSGSATIL-PG 91 (543)
T ss_dssp EEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSS-----SSEEEC--CCSBCCCSGGGTTEEEEEEEEEE-TT
T ss_pred eECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCc-----cceEEC--CeeccCCCccccCCEEcceEEEe-eC
Confidence 345554444699999999987542 22 46789999997 899985 46675543333334445664443 58
Q ss_pred CeEEEEEeeee-CCcceEEEEEeCCC-----CCCEEcc-ccCccCCCC---CccccCe
Q 007857 204 GRWRVLVGGQI-DNEGMAFVYWSWDF-----IHWTKLD-HPLYSVQET---GMWECPD 251 (587)
Q Consensus 204 g~~~m~~g~~~-~~~G~~~ly~S~Dl-----~~W~~~~-~~~~~~~~~---~~wECPd 251 (587)
|+++|++.+.. +..-...+..|+|. .+|+... .|+.....+ .-+.-|.
T Consensus 92 g~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~ 149 (543)
T 1st8_A 92 NIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPS 149 (543)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCC
T ss_pred CEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCe
Confidence 99999987632 23334567778764 8899863 344433222 3466676
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0091 Score=65.89 Aligned_cols=116 Identities=15% Similarity=0.205 Sum_probs=73.3
Q ss_pred eEeeeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC
Q 007857 128 CWSGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG 204 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g 204 (587)
+-++..++..+|+++|||..+... +...-++|+|+|+ +||+.. .|+|.+...++....-.+.++.. .+|
T Consensus 21 ~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~G~~SGsav~~-~dg 92 (541)
T 2ac1_A 21 MNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL-----INWDPH--PPAIFPSAPFDINGCWSGSATIL-PNG 92 (541)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSBEEE--EEEECCCSGGGTTCEEEEEEEEC-TTS
T ss_pred eeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCc-----cceEEC--ceeecCCCccccCCEEcceEEEe-eCC
Confidence 345554444699999999976532 3345689999997 899986 36776543343344456665433 588
Q ss_pred eEEEEEeeee-CCcceEEEEEeCCC-----CCCEEcc-ccCccCC--CC---CccccCe
Q 007857 205 RWRVLVGGQI-DNEGMAFVYWSWDF-----IHWTKLD-HPLYSVQ--ET---GMWECPD 251 (587)
Q Consensus 205 ~~~m~~g~~~-~~~G~~~ly~S~Dl-----~~W~~~~-~~~~~~~--~~---~~wECPd 251 (587)
+++|++.+.. +..-...+..|+|. .+|+... .|+...+ .+ .-+.-|.
T Consensus 93 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~ 151 (541)
T 2ac1_A 93 KPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPT 151 (541)
T ss_dssp CEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCC
T ss_pred EEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCe
Confidence 9999987632 23334567778764 8999863 3544332 22 2456676
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.015 Score=63.85 Aligned_cols=134 Identities=9% Similarity=0.094 Sum_probs=83.8
Q ss_pred ceE-ECCEEEEEEEECCCCCC-CCCCceEEEEE-------eCC---CcccEeccCCCCCCCcc--------------CCC
Q 007857 73 PMY-YKGVYHLFYQYNPLGPL-FGDKMIWAHSV-------SYD---LINWIHLSHALCPSGPY--------------DIN 126 (587)
Q Consensus 73 ~~~-~~G~YHlfyQ~~P~~~~-~g~~~~Wgha~-------S~D---lv~W~~~~~al~P~~~~--------------d~~ 126 (587)
.+. .+|++||||..+-+... .. ....+.+. |+| +..|+..++.+.|+..+ +..
T Consensus 200 Ai~~~DG~l~LFYTG~~~~~~~~~-~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~ 278 (571)
T 2yfr_A 200 ATLNKDGSIQLYYTKVDTSDNNTN-HQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNI 278 (571)
T ss_dssp EEECTTSCEEEEEEEEECTTTTCC-EEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCC
T ss_pred eEECcCCEEEEEEeccccCCCCcc-cceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcc
Confidence 344 59999999997644321 11 23445432 467 55676666767776421 334
Q ss_pred CeEeeeEEEccCCeEEEEEeeecCCC-----------------------------------------ceeEEEEEecCCC
Q 007857 127 SCWSGSVTILPGDKPFILYTGIDASG-----------------------------------------QQVQNLAMPENLS 165 (587)
Q Consensus 127 Gv~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~~A~s~D~~ 165 (587)
..-.+-++.+.+|++||++.+..... ...++++.|+|..
T Consensus 279 ~FRDP~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~ 358 (571)
T 2yfr_A 279 AMRDAHVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV 358 (571)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT
T ss_pred cCcCCeEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc
Confidence 46678887754599999998874321 2456788887642
Q ss_pred CCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 166 d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
..+..|+-. .|++.... ....+.-|.+ ++ .+|+||+++..+.
T Consensus 359 -~n~~~We~~--~pL~~~~~--v~dm~EcP~l-f~-~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 359 -KNPSVAKVY--SPLISAPM--VSDEIERPDV-VK-LGNKYYLFAATRL 400 (571)
T ss_dssp -TSCCEEEEC--CCSEECTT--TBSCCEEEEE-EE-ETTEEEEEEEEEG
T ss_pred -CCcccceec--cccccCCC--cCceeecCcE-EE-ECCEEEEEEeCCC
Confidence 113689853 57775432 1346777884 44 5899999997763
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.019 Score=63.04 Aligned_cols=118 Identities=11% Similarity=0.138 Sum_probs=74.2
Q ss_pred eeeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEc---CCCCCCCCCccCCeEEeecCC
Q 007857 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT---PPNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~---~p~~~~~~~fRDP~V~w~~~~ 203 (587)
++..++..+|+++|||.-+... +...-++|+|+|+ +||+..+ ++|. .|. .+....-++.++-. .+
T Consensus 22 DPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dl-----v~W~~~~--~al~~~g~P~-~d~~g~~SGsav~~-~~ 92 (518)
T 1y4w_A 22 DPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDL-----THWEEKP--VALLARGFGS-DVTEMYFSGSAVAD-VN 92 (518)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSCEEEE--EEECCBTTTS-CCCBEEEEEEEEEC-TT
T ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-----ccEEECC--ceEecCCCCC-CCCCceEeeeEEEc-CC
Confidence 4554444699999999866432 3456789999997 8999863 5661 221 23345567775543 34
Q ss_pred C----------eEEEEEeeeeC-C------------cceEEEEEeCC-CCCCEEc--cccCccCCC------CCccccCe
Q 007857 204 G----------RWRVLVGGQID-N------------EGMAFVYWSWD-FIHWTKL--DHPLYSVQE------TGMWECPD 251 (587)
Q Consensus 204 g----------~~~m~~g~~~~-~------------~G~~~ly~S~D-l~~W~~~--~~~~~~~~~------~~~wECPd 251 (587)
| +++|++.+... . .-...+..|+| +.+|+.. +.|+..... ..-+.-|.
T Consensus 93 ~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~ 172 (518)
T 1y4w_A 93 NTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPF 172 (518)
T ss_dssp CTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEE
T ss_pred CccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCc
Confidence 3 89998866431 1 12456777877 8899986 235543322 13577888
Q ss_pred EEEec
Q 007857 252 IFPVS 256 (587)
Q Consensus 252 lf~l~ 256 (587)
+|.-+
T Consensus 173 V~~~~ 177 (518)
T 1y4w_A 173 VFWHD 177 (518)
T ss_dssp EEEET
T ss_pred EeEEC
Confidence 88765
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0035 Score=68.87 Aligned_cols=127 Identities=10% Similarity=0.060 Sum_probs=79.4
Q ss_pred ECCEEEEEEEECCCC---CCCCC-CceEEEEEeCCC--cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 76 YKGVYHLFYQYNPLG---PLFGD-KMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~---~~~g~-~~~Wgha~S~Dl--v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
.+|+++|||.-+... ..-+. ...-++|+|+|. ++|+..+++|...........-++.+.. .+|+++|++.+..
T Consensus 121 ~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~pvi~~P~~~~~~~fRDP~V~~-~~g~w~mv~ga~~ 199 (526)
T 3pij_A 121 DNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQGMIIDCPTDKVDHHYRDPKVWK-TGDTWYMTFGVSS 199 (526)
T ss_dssp TTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEEEEECCCGGGEEEEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cCCEEEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECCccccCCCCccccccccCEEEE-ECCEEEEEEEEec
Confidence 368999999865211 00120 146789999997 8999887655321111122355777766 6899999987544
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC-----eEEEEEeee
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g-----~~~m~~g~~ 213 (587)
.+......+..|+|+ ++|+.. .+++..+.. ....|--|-+ +. -+| +|+|+++.+
T Consensus 200 ~~~~G~i~ly~S~Dl-----~~W~~~--g~l~~~~~~-~g~mwECPdl-f~-l~~~~g~~k~vL~~s~~ 258 (526)
T 3pij_A 200 ADKRGQMWLFSSKDM-----VRWEYE--RVLFQHPDP-DVFMLECPDF-SP-IKDKDGNEKWVIGFSAM 258 (526)
T ss_dssp TTSCEEEEEEEESSS-----SSCEEE--EEEEECSCT-TCCEEEEEEE-EE-EECTTSCEEEEEEEEEE
T ss_pred CCCCcEEEEEECCCC-----CcceEc--CcccccCCC-ccCeEECCEE-EE-ECCCCCceeEEEEEecc
Confidence 344456678889886 899975 355543321 1245666763 33 234 899987754
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.026 Score=61.51 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=72.9
Q ss_pred eeeEEEccCCeEEEEEeeecCC--CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC---
Q 007857 130 SGSVTILPGDKPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--- 204 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~--~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g--- 204 (587)
++..++..+|+++|||.-+... ... -++|+|+|+ +||+..+ +.|.+.. ....-.+.++-. .+|
T Consensus 15 DPNG~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~DL-----vhW~~~~--~aL~P~~---~~g~~SGSav~~-~~~~~g 82 (492)
T 4ffh_A 15 NPQRPVTTHGAYQLYYLHSDQNNGPGG-WDHASTTDG-----VAFTHHG--TVMPLRP---DFPVWSGSAVVD-TANTAG 82 (492)
T ss_dssp EEEEEEEETTEEEEEEEEESSTTCCCE-EEEEEESSS-----SSCEEEE--EEECCBT---TBCCCCEEEEEE-TTCSSS
T ss_pred CCeeeEEECCEEEEEEECCCCCCCCCc-EEEEEeCCC-----CccEECC--CCCCCCC---CCCEEeceEEEe-CCCccc
Confidence 3444444699999999876432 122 789999997 8999863 5664422 234556665544 444
Q ss_pred ----eEEEEEeeeeC---CcceEEEEEeCC-CCCCEEccccCccCCCCCc------------cccCeEEEec
Q 007857 205 ----RWRVLVGGQID---NEGMAFVYWSWD-FIHWTKLDHPLYSVQETGM------------WECPDIFPVS 256 (587)
Q Consensus 205 ----~~~m~~g~~~~---~~G~~~ly~S~D-l~~W~~~~~~~~~~~~~~~------------wECPdlf~l~ 256 (587)
.++|++.+... ..-...+..|+| +.+|+..+.|+...+...- +.-|.+|+-+
T Consensus 83 ~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~ 154 (492)
T 4ffh_A 83 FGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDT 154 (492)
T ss_dssp SCTTEEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEET
T ss_pred cCCCcEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEEC
Confidence 48888866431 122456778888 7899998546554322222 7789988864
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.2 Score=52.08 Aligned_cols=187 Identities=13% Similarity=0.107 Sum_probs=101.0
Q ss_pred cceeecCCCCCccCCCc----ceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCC-e
Q 007857 56 TSYHFRPPQNWINDPNG----PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINS-C 128 (587)
Q Consensus 56 p~yH~~p~~gw~nDPnG----~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~G-v 128 (587)
..-=|.||.++ +||.+ ++. .||+..++|......+ + ..+++..+|+|. .+|++......+...+ + |
T Consensus 8 ~~~if~~~~~~-~~~~~~yp~~v~L~dG~lLa~~~~~~~~~--~-~~~~~v~rS~DgG~TW~~~~~v~~~~~g~---~~~ 80 (355)
T 3a72_A 8 NVTIFSPPSDY-IVPRTLYPRNEQLPNGDLLATWENYSPEP--P-AVYFPIYRSKDHGKTWNEISRVHDTVNGY---GLR 80 (355)
T ss_dssp EEEEECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCSS--S-CCCEEEEEESSTTSCCEEEEEECCTTTSS---CEE
T ss_pred eeeEecCCccc-CCCCCccceEEEcCCCCEEEEEEeecCCC--C-CceEEEEEEcCCCcCcCCCcccCCCcCCc---ccc
Confidence 34456777764 56652 222 4898888776543321 3 466788889885 7999865433222211 3 3
Q ss_pred EeeeEEEcc-------CCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCC--CCCCccCCeE
Q 007857 129 WSGSVTILP-------GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGV--KDDMFRDPTT 197 (587)
Q Consensus 129 ~SGsav~~~-------dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~--~~~~fRDP~V 197 (587)
+.++++..+ +|++.+.+.....+ ....+.+..|+|+| ++|++.. .+-... +.. .....-.|++
T Consensus 81 ~~P~l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~~~~~~g~~~v~eP~~ 154 (355)
T 3a72_A 81 YQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGEARPNNGLTPVWEPFL 154 (355)
T ss_dssp EEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESCSSCCTTCCCEEEEEE
T ss_pred cCCcEEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCC----ccCccCc--cccccCccccccCCCccccceE
Confidence 466666544 78877665443222 23456788999987 8999853 222211 110 0011124543
Q ss_pred EeecCCCeEEEEEeeee-C-Ccc-eEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEecc
Q 007857 198 AWQAPDGRWRVLVGGQI-D-NEG-MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257 (587)
Q Consensus 198 ~w~~~~g~~~m~~g~~~-~-~~G-~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~ 257 (587)
. . .+|+.++++..+. + ..+ .+.+..|+|+++|...............--.|.+.+|..
T Consensus 155 ~-~-~~G~l~~~~~~~~~~~~~~~~~~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 215 (355)
T 3a72_A 155 L-A-NKGKLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPN 215 (355)
T ss_dssp E-E-ETTEEEEEEEECCCTTTCSCEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred E-c-cCCeEEEEECCCCCCCCCCcEEEEEECCCCCCCCCCeeccccCccCCCCCceEEEECCC
Confidence 2 2 3677777775443 1 233 355568899999965322111111111111377888873
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.018 Score=63.54 Aligned_cols=82 Identities=15% Similarity=0.064 Sum_probs=54.2
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC--------------
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ-------------- 242 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~-------------- 242 (587)
.||||. .++.||.|+.. ++.|||+.... +....+.+|+|+||.+|+..+..+....
T Consensus 9 ~NPil~-------g~~~DP~iir~--~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~ 78 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFRV--GSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGA 78 (542)
T ss_dssp ESCSCC-------SCCCSCEEEEE--TTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTT
T ss_pred cCCccC-------CCCCCCeEEEE--CCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccccCCccccccccCCcccc
Confidence 489983 24689997643 78999986543 2222478999999999999886442110
Q ss_pred CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 243 ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 243 ~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
.....-.|++...+..| +++|.++.+
T Consensus 79 ~~~~~WAP~i~~~~~~G-------------~fYly~~~~ 104 (542)
T 3zxk_A 79 YVKGIWASTLRYRRSND-------------RFYWYGCVE 104 (542)
T ss_dssp TTCSBCSCEEEEETTTT-------------EEEEEEEET
T ss_pred cCCceECCcEEEECCCC-------------EEEEEEECC
Confidence 12234578888875223 888877764
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.28 Score=51.25 Aligned_cols=167 Identities=15% Similarity=0.178 Sum_probs=94.3
Q ss_pred cccceeecCCCCCccCCCc----ceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCC
Q 007857 54 YLTSYHFRPPQNWINDPNG----PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINS 127 (587)
Q Consensus 54 ~Rp~yH~~p~~gw~nDPnG----~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~G 127 (587)
|-..-=|.|+.++ +||.+ ++. .||+..++|......+ + ..++...+|+|. .+|++......+...+ .-
T Consensus 11 ~~~~~if~~~~~~-~~~~~~yp~~v~L~dG~LLa~~~~~~~~~--~-~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~ 84 (367)
T 2ydt_A 11 FSNVEIFDPPTNY-RDPQVLYARPLELSDGTLLGTWENYSPEP--P-NVWFPIVKSKDGGKTWKEISKVKDTQNNW--GL 84 (367)
T ss_dssp EEEEEEECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCSS--S-CCCEEEEEESSTTSSCEEEEEECCCSSSS--CE
T ss_pred ccceeEecCCccc-CCCCCCceeEEEcCCCCEEEEEEeccCCC--C-CeEEEEEEECCCCcCcCcCcccCCCCCCc--cc
Confidence 3334456777764 57762 222 4898888775433221 3 567888899885 7999865433222222 12
Q ss_pred eEeeeEEEcc-------CCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCC--CCCCccCCe
Q 007857 128 CWSGSVTILP-------GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGV--KDDMFRDPT 196 (587)
Q Consensus 128 v~SGsav~~~-------dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~--~~~~fRDP~ 196 (587)
|+.+++++.. +|++.+.+.....+ ....+.+..|+|+| ++|++.. .|.... +.. .....-+|+
T Consensus 85 ~~~P~l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~~--~i~~g~~~~~~~g~~~v~eP~ 158 (367)
T 2ydt_A 85 RYQPQLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFVS--HVALGGEALPNPGLTPVWEPF 158 (367)
T ss_dssp EEEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEEE--EEEEESCSSCCTTCCCEEEEE
T ss_pred ccCCeEEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCCe--ecccCCCcccccCCCccccce
Confidence 4567666544 67777766543222 23456688899987 8999853 233211 100 001122454
Q ss_pred EEeecCCCeEEEEEeeeeC--Ccce-EEEEEeCCCCCCEEc
Q 007857 197 TAWQAPDGRWRVLVGGQID--NEGM-AFVYWSWDFIHWTKL 234 (587)
Q Consensus 197 V~w~~~~g~~~m~~g~~~~--~~G~-~~ly~S~Dl~~W~~~ 234 (587)
++ . .+|+.++++....+ ..|+ +.+..|+|.++|...
T Consensus 159 ~~-~-~~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~ 197 (367)
T 2ydt_A 159 LM-T-YKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKV 197 (367)
T ss_dssp EE-E-ETTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCCC
T ss_pred EE-C-CCCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCCc
Confidence 33 2 46777766654432 2343 556689999999643
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.089 Score=54.76 Aligned_cols=145 Identities=17% Similarity=0.260 Sum_probs=83.5
Q ss_pred eEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecC---
Q 007857 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDA--- 150 (587)
Q Consensus 74 ~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~--- 150 (587)
...+|+..++|.....++.+ ...+.|++|+|+.+|...-....+. .+... .-...++...||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~--~~~~~~~~S~DG~TWs~~~~~~~~~-~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~ 230 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY--GQTMVHQVTNDLKNWGPVVEDVTYP-TYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGT 230 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC--SCEEEEEEESSSSSCCCCEEEECCS-STTCE-EEEEEEEECTTSCEEEEEEEEBCTTS
T ss_pred EccCCeEEEEECCCCCCCCC--CcEEEEEECCCCCCCCCCeeccccC-ccCCC-CCceEEEECCCCCEEEEEEECCCccc
Confidence 44799999999765433333 3679999999999997642211221 11111 11245556679999998886532
Q ss_pred -CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecC---CCeEEEEEeeeeCCcceEEEEEeC
Q 007857 151 -SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP---DGRWRVLVGGQIDNEGMAFVYWSW 226 (587)
Q Consensus 151 -~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~---~g~~~m~~g~~~~~~G~~~ly~S~ 226 (587)
.+......++|+|+ .+|....+.++.... + ....--|.|.|... +|+- ++.+. ..+ .+|.|.
T Consensus 231 ~~~~~~~~~~iS~DG-----~tw~~~~~~~~~~~~-~--~~~~g~p~v~~~~~gg~~g~l-l~s~~---~~~--~v~~s~ 296 (355)
T 3a72_A 231 ETYSFPLYYRLSSDP-----ENIASAPGQRLVVSS-G--TQPTSSPYAVWTPYGGENGTI-IVSSG---TQG--TLFINK 296 (355)
T ss_dssp SSCBCBEEEEEESST-----TCCTTSCCEECCBTT-C--CCCBSSCEEEEESTTSTTCEE-EEECS---SCS--SEEEES
T ss_pred CCCceeEEEEECCCc-----ccccCcCCcceecCC-C--cccCCCCeEEECcCCCCCCeE-EEEcC---CCc--EEEEEC
Confidence 12345678889885 789754323333322 2 12356788888632 3432 23232 122 256664
Q ss_pred C-C-CCCEEccc
Q 007857 227 D-F-IHWTKLDH 236 (587)
Q Consensus 227 D-l-~~W~~~~~ 236 (587)
| . ..|+....
T Consensus 297 ~~g~~~W~~~~~ 308 (355)
T 3a72_A 297 ALGEGEWTEIPC 308 (355)
T ss_dssp STTCSCBEEECC
T ss_pred CCCCCCCeECCC
Confidence 4 5 78987653
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.15 Score=53.31 Aligned_cols=144 Identities=16% Similarity=0.237 Sum_probs=81.5
Q ss_pred eEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC-CCCeEeeeEEEccCCeEEEEEeeecCC-
Q 007857 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD-INSCWSGSVTILPGDKPFILYTGIDAS- 151 (587)
Q Consensus 74 ~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d-~~Gv~SGsav~~~dg~~~l~YTg~~~~- 151 (587)
+..+|+..++|......+.+ ...+.|++|+|..+|...-... +...+. ..| -+.++...||+++|.|.-....
T Consensus 160 ~~~~G~l~v~~~d~~~~~~~--~q~l~~~~S~DG~TWs~~~~~~-~~~~~~~rpg--~p~v~~l~dG~l~~~y~~~~~~~ 234 (367)
T 2ydt_A 160 MTYKEKLILYYSDQRDNATH--SQKLVHQTTTDLKKWSKVVDDT-KYANYYARPG--MPTVAKLPNNEYIYVYEYGGGPN 234 (367)
T ss_dssp EEETTEEEEEEEECCSTTTC--SSEEEEEEESSSSSCCCCEEEE-CCSSTTCEEE--EEEEEECTTSCEEEEEEEETCSC
T ss_pred ECCCCcEEEEECCCCCCCCC--CcEEEEEECCCCCCCCCceecc-ccCCcCCCCC--cceEEECCCCcEEEEEEecCCCC
Confidence 45799999999765421222 3578999999999997642211 211111 112 1344556789999988754311
Q ss_pred ------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeec---CCCeEEEEEeeeeCCcceEEE
Q 007857 152 ------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA---PDGRWRVLVGGQIDNEGMAFV 222 (587)
Q Consensus 152 ------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~---~~g~~~m~~g~~~~~~G~~~l 222 (587)
......+++|+|+ .+|....+.++.. +.+ ...-.-|+|+|.. .+|+-++. +. . +. .+
T Consensus 235 ~~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~--~~~~~sp~v~~~p~~~~~g~l~~s-~~-~---~~-~v 300 (367)
T 2ydt_A 235 PPAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDG--TTPAGSPYVVWTPYGGKNGTIVVS-CG-T---RS-EI 300 (367)
T ss_dssp CCTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTC--CCCBSSCEEEEESTTSTTCEEEEE-CS-S---CS-CE
T ss_pred cccccccccceEEEEcCCc-----cccCCcCCceeec-CCC--cccCcCceEEECcCCCCCCeEEEE-cC-C---Cc-eE
Confidence 1234567889886 7897643223332 212 1234578988973 24533322 22 1 11 36
Q ss_pred EEeCCC-C--CCEEccc
Q 007857 223 YWSWDF-I--HWTKLDH 236 (587)
Q Consensus 223 y~S~Dl-~--~W~~~~~ 236 (587)
|.|.|+ . .|+....
T Consensus 301 ~~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 301 FTNQALGDASAWKKWDV 317 (367)
T ss_dssp EEESSTTCTTCCEEECC
T ss_pred EEECCCCCCCcceeccC
Confidence 777654 4 7988754
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.064 Score=58.81 Aligned_cols=148 Identities=13% Similarity=0.080 Sum_probs=85.4
Q ss_pred ccCCCcceEE--CCEEEEEEEECCC-C--CCC-------C--CCceEEEEEeCC-CcccEeccCCCCCCCccCC-CCeE-
Q 007857 67 INDPNGPMYY--KGVYHLFYQYNPL-G--PLF-------G--DKMIWAHSVSYD-LINWIHLSHALCPSGPYDI-NSCW- 129 (587)
Q Consensus 67 ~nDPnG~~~~--~G~YHlfyQ~~P~-~--~~~-------g--~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~-~Gv~- 129 (587)
..||. +++. +|+-+|||-+... + ..| . ........+|+| ..+|... ..|.+....+. ..++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcceEEec
Confidence 46786 7774 6999999987532 1 111 1 012455677765 6999863 22322210000 1223
Q ss_pred -eeeEEEccCCeEEE-EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 130 -SGSVTILPGDKPFI-LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 130 -SGsav~~~dg~~~l-~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
.|+.++..+|++++ .|. ....+...-.+.+|+|.| ++|+... ++- ....+|.|+-. ++|+.+
T Consensus 326 g~G~GI~l~dGrLv~P~~~-~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve~-~dG~L~ 389 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQF-IDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAEV-EPGVLM 389 (523)
T ss_dssp CSEECEECTTSCEEEEEEE-ECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEEE-ETTEEE
T ss_pred CCCcceEEeCCeEEEEEEE-EcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEEe-cCCEEE
Confidence 35556667999765 332 222334455677899876 8998742 221 12567886532 478877
Q ss_pred EEEeeeeCCcceEEEEEeCC-CCCCEEc
Q 007857 208 VLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 208 m~~g~~~~~~G~~~ly~S~D-l~~W~~~ 234 (587)
|.+.... .|...+|+|.| ...|+..
T Consensus 390 ~~~R~~~--~g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 390 LNMRDNR--GGSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEEETT--CSBCEEEEESSTTSSCEEC
T ss_pred EEEEecC--CCcEEEEEECCCCCccCcC
Confidence 7665532 24446888866 7899875
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.16 Score=55.36 Aligned_cols=109 Identities=15% Similarity=0.230 Sum_probs=66.6
Q ss_pred CCeEEEEEeeecCC---C-ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeec------------
Q 007857 138 GDKPFILYTGIDAS---G-QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA------------ 201 (587)
Q Consensus 138 dg~~~l~YTg~~~~---~-~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~------------ 201 (587)
+|+++|||.-+... + ...-++|+|+|+ +||+..+ ++|.+.. +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DL-----vhW~~~~--~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSNDL-----VHWDEHE--IAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESSS-----SSCEECS--CCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccCC-----CCcEECc--ccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999865432 2 245689999997 8999853 5564432 22233344433221
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEcc-ccCccCCCCCccccCeEEEec
Q 007857 202 PDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD-HPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 202 ~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~-~~~~~~~~~~~wECPdlf~l~ 256 (587)
.+|+++|++.+.....-...+..|+| +.+|+... .|+... ...-+.-|.+|.-+
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~ 160 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHE 160 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEET
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEEC
Confidence 13578888866443333456778888 78999864 354432 23356778888665
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.69 Score=50.10 Aligned_cols=132 Identities=17% Similarity=0.191 Sum_probs=79.0
Q ss_pred eEECCEEEEEEEECCC-----CCCCC-CCceEEEEE-----eCCCcccE---eccCCCCCCCccCC-------CCeEeee
Q 007857 74 MYYKGVYHLFYQYNPL-----GPLFG-DKMIWAHSV-----SYDLINWI---HLSHALCPSGPYDI-------NSCWSGS 132 (587)
Q Consensus 74 ~~~~G~YHlfyQ~~P~-----~~~~g-~~~~Wgha~-----S~Dlv~W~---~~~~al~P~~~~d~-------~Gv~SGs 132 (587)
+..||+++|||....+ +.... .....++|+ |.|.++|+ ..++.+.|+..+.+ ...-.+-
T Consensus 169 ~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~ 248 (496)
T 3vss_A 169 VSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPF 248 (496)
T ss_dssp ECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEE
T ss_pred ECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCe
Confidence 3469999999985421 11111 023456654 67777665 44566777753321 2234777
Q ss_pred EEEc--cCCeEEEEEeeecCC-C---------------------------------ceeEEEEEecCCCCCccceeeeec
Q 007857 133 VTIL--PGDKPFILYTGIDAS-G---------------------------------QQVQNLAMPENLSDPLLKDWVKFS 176 (587)
Q Consensus 133 av~~--~dg~~~l~YTg~~~~-~---------------------------------~~~q~~A~s~D~~d~~l~~w~k~~ 176 (587)
++.+ ++|..||++.|+... + .-.++||..++. .+..|+-.
T Consensus 249 vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~- 324 (496)
T 3vss_A 249 TFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL- 324 (496)
T ss_dssp EECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE-
T ss_pred eEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe-
Confidence 7765 368899999886431 0 123456665432 13789765
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.|++..... ...+.=|.||. .+|+||++..++.
T Consensus 325 -~PL~~a~~v--~deiErP~vf~--~dGKyYLFt~s~~ 357 (496)
T 3vss_A 325 -PPILSANCV--TDQTERPQIYF--KDGKSYLFTISHR 357 (496)
T ss_dssp -EEEEEEETT--BSCCEEEEEEE--ETTEEEEEEEECS
T ss_pred -CccccCCCC--CCceeCCcEEE--ECCEEEEEEeccc
Confidence 488865322 34667788654 4899999987653
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=94.55 E-value=0.11 Score=58.02 Aligned_cols=109 Identities=15% Similarity=0.067 Sum_probs=64.4
Q ss_pred cCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~--nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.+|+++|||.-+.. + -++|+|+|+ +||+..+. .+.|.+...++....-...++-...+|+.+|++.+..
T Consensus 50 ~~G~YHlFYQ~~P~-g---WgHa~S~DL-----vhW~~~~~~~~~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~ 120 (634)
T 3lig_A 50 STGLFHVGFLHDGD-G---IAGATTANL-----ATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVS 120 (634)
T ss_dssp TTCCEEEEEEETTS-C---EEEEEESSS-----SCCEESCSTTCEEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEEC
T ss_pred CCCEEEEEEecCCC-c---eeEEEecCc-----CceeECcCCCCceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecc
Confidence 58999999986532 2 689999997 89998632 4666554333332222333332212678888876542
Q ss_pred C---------Ccc--eEEEEEeCC-CCCCEEcc-ccCccC-CCC---CccccCeEEE
Q 007857 215 D---------NEG--MAFVYWSWD-FIHWTKLD-HPLYSV-QET---GMWECPDIFP 254 (587)
Q Consensus 215 ~---------~~G--~~~ly~S~D-l~~W~~~~-~~~~~~-~~~---~~wECPdlf~ 254 (587)
. ..| ...+..|+| +.+|+... .|+... +.+ .-|-=|-+|+
T Consensus 121 ~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 121 FLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp SCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 1 122 345666766 78999874 354432 222 1355677776
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=94.18 E-value=1.2 Score=48.96 Aligned_cols=168 Identities=15% Similarity=0.028 Sum_probs=91.4
Q ss_pred ceEE-CCEEEEEEEECCCCCC-CCCCceEEEEEeCCC-cccEeccCCCCCCC-ccCCCCeEeeeEEEcc-CCeEEEEEee
Q 007857 73 PMYY-KGVYHLFYQYNPLGPL-FGDKMIWAHSVSYDL-INWIHLSHALCPSG-PYDINSCWSGSVTILP-GDKPFILYTG 147 (587)
Q Consensus 73 ~~~~-~G~YHlfyQ~~P~~~~-~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~-~~d~~Gv~SGsav~~~-dg~~~l~YTg 147 (587)
++.. +|....||...+.... .+ ........|+|. .+|+.... |..+. .....++..++.+++. +|+++|+|..
T Consensus 26 L~~~~~G~lla~~~~~~~~~~~~~-~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~ 103 (601)
T 1w8o_A 26 LTVTPDGDLLASYDGRPTGIGAPG-PNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVY 103 (601)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTS-CCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCCEEEEEcccCCCCCCCC-cceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEe
Confidence 4444 6778888877665432 34 567778889885 89997543 33321 1122356667777763 7899999975
Q ss_pred ecC-------------C-CceeEEEEEecCCCCCccceeeeecCCcEEcC---CCCCCCCCccCCe-EEeec---CCCeE
Q 007857 148 IDA-------------S-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP---PNGVKDDMFRDPT-TAWQA---PDGRW 206 (587)
Q Consensus 148 ~~~-------------~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~---p~~~~~~~fRDP~-V~w~~---~~g~~ 206 (587)
... + ......+..|+|+| ++|.+.. .+.. .+++ ...|..|- .+-.. ..|++
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l 175 (601)
T 1w8o_A 104 SQRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRL 175 (601)
T ss_dssp ESSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCE
T ss_pred ecCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceE
Confidence 321 0 11235788899986 8999742 1211 1122 11233442 11111 13777
Q ss_pred EEEEeeeeCC-cceEEEEEeCC-CCCCEEccccCccCCCCCccccCeEEEec
Q 007857 207 RVLVGGQIDN-EGMAFVYWSWD-FIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 207 ~m~~g~~~~~-~G~~~ly~S~D-l~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
++.+...... .....++.|+| ..+|+.... +. .++.| |.++++.
T Consensus 176 ~~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~~-~~----~~~~~-~~v~~~~ 221 (601)
T 1w8o_A 176 IQQYTIINAAGAFQAVSVYSDDHGRTWRAGEA-VG----VGMDE-NKTVELS 221 (601)
T ss_dssp EEEEEEECTTSCEEEEEEEESSTTSSCEECCC-BC----SSCCS-EEEEECT
T ss_pred EEEEEEcCCCCceeEEEEEECCCCcCccCCCC-CC----CCCCc-CEEEEeC
Confidence 6544332111 12345666766 899998643 21 12334 3677775
|
| >4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A | Back alignment and structure |
|---|
Probab=93.37 E-value=1.6 Score=40.77 Aligned_cols=101 Identities=8% Similarity=0.053 Sum_probs=58.8
Q ss_pred cEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEEecC-CCCeEEEEEEEeCceEEEEc
Q 007857 453 PFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDP-HHGKVSLRSLVDHSIVESFA 531 (587)
Q Consensus 453 ~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~-~~~~~~LrifvD~S~vEvFv 531 (587)
..||.+|.++|....+.+.++. ..+.+.+..... +. . .... ..+..+ .++..+|+|.++.+.|++|+
T Consensus 82 ~~Gi~fR~~~d~~~gY~~~i~~---~~~~~~l~k~~~---g~----~-~~L~-~~~~~~~~g~w~~l~I~~~G~~i~~~v 149 (185)
T 4b1m_A 82 AGALMFRSDKDAKNGYLANVDA---KHDLVKFFKFEN---GA----A-SVIA-EYKTPIDVNKKYHLKTEAEGDRFKIYL 149 (185)
T ss_dssp EEEEEEEECTTSSSEEEEEEET---TTTEEEEEEEET---TE----E-EEEE-EEECCCCSSCCEEEEEEEETTEEEEEE
T ss_pred eEEEEEEEcCCCCCcEEEEEEC---CCCEEEEEEEeC---Cc----E-EEee-eccccCCCCCeEEEEEEEECCEEEEEE
Confidence 5789999877766777766653 122333322211 10 0 0000 111122 25678999999999999999
Q ss_pred CCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEe
Q 007857 532 ARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNA 571 (587)
Q Consensus 532 NdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~ 571 (587)
| |+.+++.+-..-.. ..+++.+.. +.+.+.++++
T Consensus 150 n-G~~v~~~~D~~~~~--G~iGl~~~~---~~v~F~ni~V 183 (185)
T 4b1m_A 150 D-DRLVIDAHDSVFSE--GQFGLNVWD---ATAVFQNVTK 183 (185)
T ss_dssp T-TEEEEEEECCSCCC--EEEEEEEEE---EEEEEEEEEE
T ss_pred C-CEEEEEEECCCCCC--CcEEEEEcC---CeEEEEEEEE
Confidence 7 78888877543222 356776642 2466666654
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=93.08 E-value=0.69 Score=49.38 Aligned_cols=125 Identities=14% Similarity=0.194 Sum_probs=67.6
Q ss_pred eEEEEEeCC-CcccEeccCCCCCC--CccCCC-CeEeeeEEEccC----CeEEE-EEeeecCCCceeEEEEEecCCCCCc
Q 007857 98 IWAHSVSYD-LINWIHLSHALCPS--GPYDIN-SCWSGSVTILPG----DKPFI-LYTGIDASGQQVQNLAMPENLSDPL 168 (587)
Q Consensus 98 ~Wgha~S~D-lv~W~~~~~al~P~--~~~d~~-Gv~SGsav~~~d----g~~~l-~YTg~~~~~~~~q~~A~s~D~~d~~ 168 (587)
.....+|+| ..+|.... .|.+. ..+..- +...|+.+...+ |++++ +|.... .......+.+|+|+|
T Consensus 188 ~~~~~~S~D~G~TWs~p~-~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEPQ-NINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCCE-ECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCCc-cCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC---
Confidence 345677877 68998632 22211 111110 222344444444 78766 443322 233455688999976
Q ss_pred cceeeeecCCcEEcC---CCC-------C--CCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEc
Q 007857 169 LKDWVKFSGNPVMTP---PNG-------V--KDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 169 l~~w~k~~~nPvi~~---p~~-------~--~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~ 234 (587)
++|+... ++... +.+ . ...+..+|.|+-. ++|+-+|+.... .|.+.+|+|.| ..+|+..
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 8998742 21110 000 0 0124457775533 578888876443 46778999977 6899753
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=92.89 E-value=1.8 Score=47.22 Aligned_cols=168 Identities=13% Similarity=0.036 Sum_probs=91.4
Q ss_pred ceEE-CCEEEEEEEECCCCC-CC-CCCceEEEEEeCC-CcccEeccCCCCCCC----ccCCCCeEeeeEEEcc-CCeEEE
Q 007857 73 PMYY-KGVYHLFYQYNPLGP-LF-GDKMIWAHSVSYD-LINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPFI 143 (587)
Q Consensus 73 ~~~~-~G~YHlfyQ~~P~~~-~~-g~~~~Wgha~S~D-lv~W~~~~~al~P~~----~~d~~Gv~SGsav~~~-dg~~~l 143 (587)
+++- +|+...||-..+.++ .+ + ........|+| ..+|.....+....+ +-..+++..++.+++. +|++++
T Consensus 186 L~~~~~G~Lla~~~~r~~~~~D~~~-~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L 264 (523)
T 4fj6_A 186 LVTTNNGTLLGVYDIRYNSSVDLQE-KIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWV 264 (523)
T ss_dssp EEECTTSCEEEEEEEESSCSCCSSS-SEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEE
T ss_pred eEECCCCcEEEEEeceeccCCCCcC-cEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEE
Confidence 4443 788888886554332 22 3 55677788988 479986543332221 1124578999999875 799999
Q ss_pred EEeeecC----------------CCceeEEEEEecCCCCCccceeeeecCCcEEcC---CCCCCCCCccCCe-EEeecCC
Q 007857 144 LYTGIDA----------------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP---PNGVKDDMFRDPT-TAWQAPD 203 (587)
Q Consensus 144 ~YTg~~~----------------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~---p~~~~~~~fRDP~-V~w~~~~ 203 (587)
||+.... ......++..|+|+| ++|.+.. .|.+ .+.+ ...+.-|- -+-. ++
T Consensus 265 ~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~---~l~~~~~~~~~-~~~~~g~G~GI~l-~d 335 (523)
T 4fj6_A 265 VAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI---NITSQVKDPSW-YFLLQGPGRGITM-QD 335 (523)
T ss_dssp EEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE---ECHHHHCCTTC-SEEEECSEECEEC-TT
T ss_pred EEEecccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe---eecccccCCcc-eEEecCCCcceEE-eC
Confidence 9874211 011345688899987 8997621 1211 1111 11112231 0112 47
Q ss_pred CeEEEEEeeeeC-Ccce-EEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 204 GRWRVLVGGQID-NEGM-AFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 204 g~~~m~~g~~~~-~~G~-~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
|++++-+-.... +... .++|+.++..+|+.... ... + .--|.++++.
T Consensus 336 GrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~-~~~----~-~~e~~vve~~ 384 (523)
T 4fj6_A 336 GTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNL-ART----N-TTEAQVAEVE 384 (523)
T ss_dssp SCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCC-SEE----T-EEEEEEEEEE
T ss_pred CeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCC-CCc----c-ccCCEEEEec
Confidence 887755543321 1223 34454455899987643 211 1 2236778876
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=92.66 E-value=0.32 Score=50.90 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=77.7
Q ss_pred ccCCCcceEE-CCEEEEEEEECCCC----C---------------CCCCCceEEEEEeCC-CcccEeccCCCCCC---Cc
Q 007857 67 INDPNGPMYY-KGVYHLFYQYNPLG----P---------------LFGDKMIWAHSVSYD-LINWIHLSHALCPS---GP 122 (587)
Q Consensus 67 ~nDPnG~~~~-~G~YHlfyQ~~P~~----~---------------~~g~~~~Wgha~S~D-lv~W~~~~~al~P~---~~ 122 (587)
..+|. ++.. +|+.+|||.+++.. . .|.........+|+| ..+|... ..|.+. ..
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p-~~l~~~~~~~~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKP-VDLTKELTPDG 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCC-EECHHHHSCTT
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCc-ccCcccccccc
Confidence 34565 5666 79999999764421 0 111023455677887 7999853 112111 11
Q ss_pred cCCCCeEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecC--CCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee
Q 007857 123 YDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPEN--LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (587)
Q Consensus 123 ~d~~Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D--~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~ 200 (587)
+.....-.|+.|+..+|++++-.. ..+.+|+| +| ++|+... ++ +. -.+|.|+-.
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~--~~---~~------~~e~~vve~ 235 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQR--LS---GA------GAEGTIVQT 235 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEE--CT---TC------CSSEEEEEC
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccC--cC---CC------CCcCEEEEe
Confidence 211111123445556898765432 24567988 65 8998642 21 11 147775533
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEc
Q 007857 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKL 234 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~ 234 (587)
++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 236 -~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 236 -PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp -TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred -CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 578887776432 222457999999 999754
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=92.23 E-value=1.3 Score=48.42 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=65.7
Q ss_pred eeeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC---
Q 007857 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--- 203 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~--- 203 (587)
++..++..+|+++|||.-+... +...-++|+|+|+ +||+..+ +.| ++.+ ....-...++-. .+
T Consensus 43 DPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DL-----vhW~~~~--~aL-~d~~--g~~~~SGSav~~-~~~~~ 111 (516)
T 3sc7_X 43 EPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDL-----MHWAHKP--TAI-ADEN--GVEAFTGTAYYD-PNNTS 111 (516)
T ss_dssp EEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSS-----SSCEEEE--EEE-CCBT--TEEEEEEEEEEC-TTCTT
T ss_pred CCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCC-----CcceecC--ccc-cCCC--CceeEeceEEEe-CCccc
Confidence 3443444699999999876432 2345679999997 8999863 344 2211 001122332322 22
Q ss_pred -------CeEEEEEeeeeCC--cceEEEEEeCC-CCCCEEcc-ccCccCCC----C----CccccCeEEEec
Q 007857 204 -------GRWRVLVGGQIDN--EGMAFVYWSWD-FIHWTKLD-HPLYSVQE----T----GMWECPDIFPVS 256 (587)
Q Consensus 204 -------g~~~m~~g~~~~~--~G~~~ly~S~D-l~~W~~~~-~~~~~~~~----~----~~wECPdlf~l~ 256 (587)
+.++|++.+.... .-...+..|+| ..+|+... .|+..... + .-+.=|.+|.-+
T Consensus 112 g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~ 183 (516)
T 3sc7_X 112 GLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHR 183 (516)
T ss_dssp SSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEET
T ss_pred ccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEEC
Confidence 2588777664322 12345677877 58999864 35432110 1 135778888865
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=92.03 E-value=1.3 Score=50.00 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=66.8
Q ss_pred EEEEEeCC-CcccEeccCCCCCCCccCCCCeEe--eeEEEccC----CeEEE-EEeeecCCCceeEEEEEecCCCCCccc
Q 007857 99 WAHSVSYD-LINWIHLSHALCPSGPYDINSCWS--GSVTILPG----DKPFI-LYTGIDASGQQVQNLAMPENLSDPLLK 170 (587)
Q Consensus 99 Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~S--Gsav~~~d----g~~~l-~YTg~~~~~~~~q~~A~s~D~~d~~l~ 170 (587)
+-..+|+| ..+|.... .|.+...-.....+. |+.+...+ |++++ .|+... ....+.+|+|+| +
T Consensus 428 i~v~~S~DgG~TWs~p~-~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLD-IVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCE-ECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCc-ccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 45567877 68998653 232211001112222 34455444 78765 444321 234677899986 8
Q ss_pred eeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEcc
Q 007857 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 171 ~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~ 235 (587)
+|++... + .|.+ .+..+|.|+-. .+|+.+|+.... .|...+|+|.| ...|+...
T Consensus 499 TW~~~~~--~--~p~~---~~~~e~~vve~-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 499 NWTYVEA--D--NLTG---GATAEAQIVEM-PDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp SCEEEEC--C--CCCS---CCCCCEEEEEC-TTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred ceEeCcc--C--CCCC---CCccceEEEEe-CCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 9998531 1 1211 35678885432 578888876442 35667899987 78998654
|
| >4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=90.73 E-value=0.036 Score=51.26 Aligned_cols=107 Identities=10% Similarity=0.061 Sum_probs=63.6
Q ss_pred ccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEEecCCCCeEEEEEEEeCceEEEEc
Q 007857 452 GPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFA 531 (587)
Q Consensus 452 ~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~~~~~LrifvD~S~vEvFv 531 (587)
+.+||.++.++|....+.+.++... +.+.+ .|...+..... .....+++ .++..+|||.++.+.|++|+
T Consensus 60 ~~~Gi~fR~~~d~~~~Y~~~i~~~~---~~~~l---~~~~~G~~~~l----~~~~~~~~-~g~w~~l~I~~~G~~i~~~v 128 (172)
T 4azz_A 60 GAGALMFRSDKDAKNGYLANVDAKH---DLVKF---FKFENGAASVI----AEYKTPID-VNKKYHLKTEAEGDRFKIYL 128 (172)
Confidence 3578999887766666666665431 22222 22212111000 01111221 35678999999999999999
Q ss_pred CCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeecc
Q 007857 532 ARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMN 575 (587)
Q Consensus 532 NdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~ 575 (587)
| |+.+++.+.+.... ..+++.+. ++ .+.+.++++=+|+
T Consensus 129 n-G~~v~~~~D~~~~~--G~iGl~~~-~g--~~~f~ni~v~~~~ 166 (172)
T 4azz_A 129 D-DRLVIDAHDSVFSE--GQFGLNVW-DA--TAVFQNVTKESLE 166 (172)
Confidence 7 79999998876543 46777653 22 4566666665543
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=90.66 E-value=1.2 Score=47.87 Aligned_cols=125 Identities=21% Similarity=0.266 Sum_probs=67.3
Q ss_pred EEEEEeCC-CcccEeccCCCCCC--CccCCC-CeEeeeEEEccC----CeEEE-EEeeecC---CCceeEEEEEecCCCC
Q 007857 99 WAHSVSYD-LINWIHLSHALCPS--GPYDIN-SCWSGSVTILPG----DKPFI-LYTGIDA---SGQQVQNLAMPENLSD 166 (587)
Q Consensus 99 Wgha~S~D-lv~W~~~~~al~P~--~~~d~~-Gv~SGsav~~~d----g~~~l-~YTg~~~---~~~~~q~~A~s~D~~d 166 (587)
.-..+|+| ..+|... ..|.+. ..+..- +.-.|+.++..+ |++++ +|+.... .+.....+.+|+|.|
T Consensus 216 ~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G- 293 (471)
T 2w20_A 216 LWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG- 293 (471)
T ss_dssp EEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT-
T ss_pred EEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC-
Confidence 44567877 7899863 223221 111110 011233455445 78766 5553211 122345678999986
Q ss_pred CccceeeeecCCcEEcC-C-CC-------CC--CCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEc
Q 007857 167 PLLKDWVKFSGNPVMTP-P-NG-------VK--DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 167 ~~l~~w~k~~~nPvi~~-p-~~-------~~--~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~ 234 (587)
++|+... ++-.. + ++ .+ .....+|.++ .-.+|+.+|+... ..|.+.+|+|.| ...|+..
T Consensus 294 ---~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 ---KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp ---SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred ---CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 8998742 22111 0 01 00 0124688854 3257888777643 246677999977 6899754
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=90.43 E-value=1.6 Score=48.04 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=62.6
Q ss_pred EeeeEEEccCCeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcC-CCCCCCCCccCCeEEeecCC
Q 007857 129 WSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~-p~~~~~~~fRDP~V~w~~~~ 203 (587)
-.++.+...+|.++++|.+.... ..-.+.+..|.|+| ++|++. .++.. +.......+.||.++....+
T Consensus 22 ~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~---~~l~~~~~~~~~~~~~~P~~~~d~~~ 94 (601)
T 1w8o_A 22 RIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ---QVVSAGQTTAPIKGFSDPSYLVDRET 94 (601)
T ss_dssp EEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC---EEEECCBCSSSCBEEEEEEEEECTTT
T ss_pred eEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC---EEEecCccCCCCCccccceEEEECCC
Confidence 36666666689999999986532 12246788999986 899863 23322 11111234778985555347
Q ss_pred CeEEEEEeeeeC---------------CcceEEEEEeCC-CCCCEEcc
Q 007857 204 GRWRVLVGGQID---------------NEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 204 g~~~m~~g~~~~---------------~~G~~~ly~S~D-l~~W~~~~ 235 (587)
|+.+|+++.... ....+.+++|+| .+.|+...
T Consensus 95 g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 95 GTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp CCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 888888764211 112467888866 78998754
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=89.61 E-value=2.9 Score=46.75 Aligned_cols=149 Identities=15% Similarity=0.079 Sum_probs=81.7
Q ss_pred CccCCCcceEECCEEEEEE-EECCCCC----CCCCCceEEE-------EEeCC-C-----cccEeccCCCCCC--CccCC
Q 007857 66 WINDPNGPMYYKGVYHLFY-QYNPLGP----LFGDKMIWAH-------SVSYD-L-----INWIHLSHALCPS--GPYDI 125 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfy-Q~~P~~~----~~g~~~~Wgh-------a~S~D-l-----v~W~~~~~al~P~--~~~d~ 125 (587)
-..||. ++..+|+.+||+ .|+.... .++ ...|+. ..|+| . |+|... ..|.+. .++..
T Consensus 107 ~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~-~~~~~llLVkG~V~~S~D~Gktsk~ItWs~p-~~L~~~~~~~~~~ 183 (648)
T 1ms9_A 107 RVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGD-ARDWDILLAVGEVTKSTAGGKITASIKWGSP-VSLKEFFPAEMEG 183 (648)
T ss_dssp EEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSS-STTEEEEEEEEEEEEECGGGSCEEEEEECCC-EECGGGCCSBSSS
T ss_pred Eeeccc-eeeecccEEEEEEeecCCccccccccc-CCCcceEEEEeeeccccccccccceeeccCc-ccCcccccccccc
Confidence 355787 666789888888 4543321 122 335664 24665 3 479753 223221 11110
Q ss_pred ---CCeE--eeeEEEccCCeEEE-EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEe
Q 007857 126 ---NSCW--SGSVTILPGDKPFI-LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAW 199 (587)
Q Consensus 126 ---~Gv~--SGsav~~~dg~~~l-~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w 199 (587)
.+.. .|+.|+..||++++ .|... ..+...-.+.+|+|.| .+|+... ++ + .....||.|+-
T Consensus 184 ~~~~~~~~GgGsGI~m~dGtLVfPv~~~~-~~g~~~s~iiySdD~G----~TW~ls~--~~---~----~~gc~EpsVvE 249 (648)
T 1ms9_A 184 MHTNQFLGGAGVAIVASNGNLVYPVQVTN-KKKQVFSKIFYSEDEG----KTWKFGK--GR---S----AFGCSEPVALE 249 (648)
T ss_dssp SBEEEEEECSEECEECTTSCEEEEEEEEE-TTCCEEEEEEEESSTT----SSCEECS--CC---C----CTTEEEEEEEE
T ss_pred ceeEEEEecCCceEEecCCcEEEEEEEEc-ccccceeeEEEecCCC----CCEEECC--CC---C----CCCccceEEEE
Confidence 1111 35556777999875 33222 2233444567898876 8998742 22 1 13568999763
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEccc
Q 007857 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLDH 236 (587)
Q Consensus 200 ~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~~ 236 (587)
. +|+-+|.... . .|...+|+|.| ...|+....
T Consensus 250 w--dG~Lmm~~R~-~--~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 250 W--EGKLIINTRV-D--YRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp E--TTEEEEEEEE-T--TSCCCEEEESSTTSSCEECTT
T ss_pred E--CCEEEEEEEc-c--CCcEEEEEecCCCcccccccc
Confidence 3 5774444332 2 24445889977 689987643
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=88.19 E-value=4.7 Score=45.49 Aligned_cols=114 Identities=17% Similarity=0.181 Sum_probs=62.2
Q ss_pred EEEEeCC-CcccEeccCCCCCCCccCC-CCeEe--eeEEE-ccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeee
Q 007857 100 AHSVSYD-LINWIHLSHALCPSGPYDI-NSCWS--GSVTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVK 174 (587)
Q Consensus 100 gha~S~D-lv~W~~~~~al~P~~~~d~-~Gv~S--Gsav~-~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k 174 (587)
...+|+| ..+|.... .| |....+. ...+. |+.++ ..+|++++.+... ....+.+|+|+| ++|++
T Consensus 449 ~v~rS~DgG~TWs~p~-~l-~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~ 517 (686)
T 2jkb_A 449 AMTTSQNRGESWEQFK-LL-PPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKK 517 (686)
T ss_dssp EEEEESSTTSCCCCCE-EC-CCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEE
T ss_pred EEEEECCCCCcCCCCe-ec-ccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEe
Confidence 4456777 67998742 23 2211111 11122 23333 3478887644332 234678999987 89998
Q ss_pred ecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEcc
Q 007857 175 FSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 175 ~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~ 235 (587)
.. ++. |.+ ...-.|.++-. .+|+.+|++... .|...+|+|.| ...|+...
T Consensus 518 ~~--~~~--p~~---~~~~e~~ivel-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~~ 568 (686)
T 2jkb_A 518 SS--ASI--PFK---NATAEAQMVEL-RDGVIRTFFRTT---TGKIAYMTSRDSGETWSKVS 568 (686)
T ss_dssp EE--EEC--SCS---SCCCCEEEEEE-ETTEEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred Cc--ccC--CCC---CCceeeEEEEe-cCCEEEEEEEcC---CCcEeEEEeCCCCCCCcccc
Confidence 53 222 211 12335664422 478888775432 24456888877 78997653
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=86.57 E-value=10 Score=40.17 Aligned_cols=67 Identities=16% Similarity=0.020 Sum_probs=42.6
Q ss_pred CCEEEEEEEECCCCC---CCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCCeEeeeEEEcc-CCeEEEEEee
Q 007857 77 KGVYHLFYQYNPLGP---LFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILP-GDKPFILYTG 147 (587)
Q Consensus 77 ~G~YHlfyQ~~P~~~---~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~Gv~SGsav~~~-dg~~~l~YTg 147 (587)
+|+...||...+.+. ..+ .+......|+|. .+|..... |.... ...+.+.++.+++. +|+++|+|+.
T Consensus 33 ~G~lla~~~~r~~~~~d~~~~-~~~i~~~rS~DgG~TWs~~~~-v~~~~--~~~~~~dp~l~~d~~~G~i~l~~~~ 104 (449)
T 2bf6_A 33 EGTLIASIDARRHGGADAPNN-DIDTAVRRSEDGGKTWDEGQI-IMDYP--DKSSVIDTTLIQDDETGRIFLLVTH 104 (449)
T ss_dssp TSCEEEEEEEETTSSCCTTSS-CEEEEEEEESSTTSSCCCCEE-EECCS--TTCEEEEEEEEECTTTCCEEEEEEE
T ss_pred CCCEEEEEeCccCccccCCCC-cceEEEEEcCCCCCCCCCCEE-eecCC--CccccccceeEEECCCCeEEEEEec
Confidence 677778886554432 112 356888899886 79997543 32222 12456677777764 6899999874
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=85.74 E-value=7.8 Score=40.18 Aligned_cols=157 Identities=13% Similarity=0.075 Sum_probs=86.1
Q ss_pred ceEE-CCEEEEEEEECCCC-CCCCCCceEEEEEeC---CC----cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 73 PMYY-KGVYHLFYQYNPLG-PLFGDKMIWAHSVSY---DL----INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 73 ~~~~-~G~YHlfyQ~~P~~-~~~g~~~~Wgha~S~---Dl----v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
++.- +|..-.||-..+.. ..+| ........|+ |. .+|.... .|.... ..++..++.+++.+|+++|
T Consensus 43 Lv~~~~G~l~A~~e~~~~~~~d~g-~~~i~~~rS~~~~D~G~~~~tW~~~~-~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 43 VVRTTTGRILAFAEGRRHTNQDFG-DINLVYKRTKTTANNGASPSDWEPLR-EVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEECTTSCEEEEEEEESSSSCSSS-SEEEEEEEBSSSSSTTCSGGGBCCCE-EEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEeCCCcEEEEEEeeeCCCCCCC-ceeEEEEEeeeecCCCcCceeccCcE-EEeeCC---CCcccccEEEEeCCCCEEE
Confidence 5554 67777777544432 2345 6778888898 86 7998543 343332 2345667777754799999
Q ss_pred EEeeecC------C-----------------CceeEEEEEecCCCCCccceeeeecCCcEEc--CCCCCCCCCccCC-eE
Q 007857 144 LYTGIDA------S-----------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT--PPNGVKDDMFRDP-TT 197 (587)
Q Consensus 144 ~YTg~~~------~-----------------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~--~p~~~~~~~fRDP-~V 197 (587)
+|+.... . ......+..|+|+| ++|.+.. .|.. .++.+ ...+..| .-
T Consensus 118 ~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~p~--~l~~~~~~~~~-~~~~~~~g~g 190 (386)
T 2xzi_A 118 FLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSKPV--DLTKELTPDGW-AWDAVGPGNG 190 (386)
T ss_dssp EEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCCCE--ECHHHHSCTTC-CSCCBCSSCC
T ss_pred EEEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCCcc--cCccccccccc-eeeccCCccE
Confidence 9963210 0 11245678898876 8997521 1211 11122 1123344 21
Q ss_pred EeecCCCeEEEEEeeeeCCcceEEEEEeC--CCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSW--DFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 198 ~w~~~~g~~~m~~g~~~~~~G~~~ly~S~--Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
+-. .+|+.++-+- ..++|+.+ ...+|+... .+.. .-|| .++++.
T Consensus 191 I~l-~dGrLv~p~~-------~~~~~S~D~~~G~tW~~~~-~~~~-----~~e~-~vve~~ 236 (386)
T 2xzi_A 191 IRL-TTGELVIPAM-------GRNIIGRGAPGNRTWSVQR-LSGA-----GAEG-TIVQTP 236 (386)
T ss_dssp EEC-TTSCEEEEET-------TEEEEEESSTTSCEEEEEE-CTTC-----CSSE-EEEECT
T ss_pred EEe-cCCEEEEEeE-------EEEEEccCCCCCCcccccC-cCCC-----CCcC-EEEEeC
Confidence 222 4777665442 23455555 589998653 2221 1243 677775
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=85.00 E-value=3.7 Score=42.37 Aligned_cols=100 Identities=10% Similarity=0.068 Sum_probs=59.5
Q ss_pred CeEe-eeEE-EccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccc----eeeeecCCcEEcCCCCCCCCCccCCeE
Q 007857 127 SCWS-GSVT-ILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLK----DWVKFSGNPVMTPPNGVKDDMFRDPTT 197 (587)
Q Consensus 127 Gv~S-Gsav-~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~----~w~k~~~nPvi~~p~~~~~~~fRDP~V 197 (587)
.+|. ++.+ ...+|.+++++.+.... ....+.+..|+|+| + +|++. .++... ......+++|.+
T Consensus 20 ~s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~-~~~~~~~~~P~~ 91 (382)
T 1so7_A 20 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQA-RLDGHRSMNPCP 91 (382)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTS-CCTTEEEEEEEE
T ss_pred eEEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccC-CCCCCccccceE
Confidence 3554 6666 55689999999875421 11125667888876 7 99852 233221 111235789986
Q ss_pred EeecCCCeEEEEEeeeeC------------CcceEEEEEeCC-CCCCEEc
Q 007857 198 AWQAPDGRWRVLVGGQID------------NEGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 198 ~w~~~~g~~~m~~g~~~~------------~~G~~~ly~S~D-l~~W~~~ 234 (587)
+....+|+-+|+++.... ....+.+++|+| .++|+..
T Consensus 92 v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~ 141 (382)
T 1so7_A 92 LYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSP 141 (382)
T ss_dssp EECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCC
T ss_pred EEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCC
Confidence 665446788877764421 123467888865 7899754
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=81.66 E-value=15 Score=38.15 Aligned_cols=148 Identities=11% Similarity=0.073 Sum_probs=80.2
Q ss_pred ccCCCcceEE-CC--EEEEEEE-ECCCCCCCC--------CCceEEEEEeCC-CcccEeccCCCCCC---CccCCCCeE-
Q 007857 67 INDPNGPMYY-KG--VYHLFYQ-YNPLGPLFG--------DKMIWAHSVSYD-LINWIHLSHALCPS---GPYDINSCW- 129 (587)
Q Consensus 67 ~nDPnG~~~~-~G--~YHlfyQ-~~P~~~~~g--------~~~~Wgha~S~D-lv~W~~~~~al~P~---~~~d~~Gv~- 129 (587)
..||.-++-. .| +.+||+. |+-....|. .....-+++|+| .++|.+.. .+.+. ....-.+.+
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~-~~~~~~~~~~~~~~~~~~ 173 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVE-TNIHDIVTKNGTISAMLG 173 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEEC-CSHHHHHHHHCSEEEEEE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCc-ccccccccccceeeeecC
Confidence 5678744443 47 8788764 332211111 012234677766 69998832 11111 000001122
Q ss_pred -eeeEEEccCCeEEE-EEeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 130 -SGSVTILPGDKPFI-LYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 130 -SGsav~~~dg~~~l-~YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
.|+.|+..+|++++ .|..... .....-.+.+|+| | ++|+.. +++- .....+|.|+-. +|+
T Consensus 174 g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~--~~~~-------~~~~~ep~vvE~--dG~ 237 (379)
T 3sil_A 174 GVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLP--SGYC-------EGFGSENNIIEF--NAS 237 (379)
T ss_dssp CSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECC--SCCE-------ECTTCCEEEEEE--TTE
T ss_pred CCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEEC--CCCC-------CccCCCCEEEEE--CCE
Confidence 45567778999865 3322211 1233445678988 6 899864 2221 124678997633 688
Q ss_pred EEEEEeeeeCCcceEEEEEeCC-CCCCEEcc
Q 007857 206 WRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 206 ~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~ 235 (587)
.+|+... .|.-.+|+|.| ...|+...
T Consensus 238 L~m~~R~----~g~r~v~~S~D~G~tWt~~~ 264 (379)
T 3sil_A 238 LVNNIRN----SGLRRSFETKDFGKTWTEFP 264 (379)
T ss_dssp EEEEECC----SSBCBCEEESSSSSCCEECT
T ss_pred EEEEEEe----CCCEEEEEEcCCCccCCCCc
Confidence 7777755 24445788866 68999763
|
| >1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* | Back alignment and structure |
|---|
Probab=81.34 E-value=4.6 Score=46.24 Aligned_cols=154 Identities=10% Similarity=0.055 Sum_probs=81.7
Q ss_pred CCcceEECCEEEE-EEEECCCCCCCCCCceEEEEE-eCCCcccEe-ccCCCCCCCccCCCCeEeeeEEEcc--CCeEEEE
Q 007857 70 PNGPMYYKGVYHL-FYQYNPLGPLFGDKMIWAHSV-SYDLINWIH-LSHALCPSGPYDINSCWSGSVTILP--GDKPFIL 144 (587)
Q Consensus 70 PnG~~~~~G~YHl-fyQ~~P~~~~~g~~~~Wgha~-S~Dlv~W~~-~~~al~P~~~~d~~Gv~SGsav~~~--dg~~~l~ 144 (587)
|.--+|.||+-++ -..... ..-. ...||-.. |.|..++-. ...-+.+...++ .+---++.+..+ +|.+++|
T Consensus 166 ~~~~f~~dG~l~~~~~~~~~--~~~~-~~~~G~~~~s~dG~~~~~~v~~~~~~~~~f~-~~yRIPaL~~~~~~~GtLLA~ 241 (781)
T 1w0p_A 166 PSASFYFDGKLIRDNIQPTA--SKQN-MIVWGNGSSNTDGVAAYRDIKFEIQGDVIFR-GPDRIPSIVASSVTPGVVTAF 241 (781)
T ss_dssp CEEEEEETTEEEEEEECCEE--CCCC-EEEEEECCSSSCEEEEEEEEEEEECCEEEEC-TTCEEEEEEECSSSTTCEEEE
T ss_pred ceeEEecCCcEEEEeccCCC--Cccc-EEEeccccccCCCcccceeEEEecCCCcccC-CCCcCcEEEEccCCCCeEEEE
Confidence 3345566777666 221111 1001 34566655 677776633 222222222222 121235555555 6999999
Q ss_pred EeeecCCC-------ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC--
Q 007857 145 YTGIDASG-------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-- 215 (587)
Q Consensus 145 YTg~~~~~-------~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-- 215 (587)
+.+..... .-.+.+..|.|+| ++|... ..|...+..-....++||.++...++|++++++.....
T Consensus 242 ad~R~~~~D~g~~~~~~~Iv~rRS~DgG----~TWs~~--~~v~~~~~~~~~~~~~dP~~v~D~~tG~I~lf~~~~~~~~ 315 (781)
T 1w0p_A 242 AEKRVGGGDPGALSNTNDIITRTSRDGG----ITWDTE--LNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDA 315 (781)
T ss_dssp EEEEETCSSTTCTTCEEEEEEEEESSSS----SSCCCC--EESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETTC
T ss_pred EcccccCCCcccccCCceEEEEEcCCCC----cccCCc--EEEecCCCCCCCCeeeCCEEEEECCCCEEEEEEEeccCCc
Confidence 98753211 1135677899987 899752 12223211111467999997776557888877643211
Q ss_pred -C---------cceEEEEEe-CCCCCCEE
Q 007857 216 -N---------EGMAFVYWS-WDFIHWTK 233 (587)
Q Consensus 216 -~---------~G~~~ly~S-~Dl~~W~~ 233 (587)
. ...+.+.+| ++...|..
T Consensus 316 ~~eg~~~~~~~~~~v~~~~S~D~G~TWS~ 344 (781)
T 1w0p_A 316 AQNGDRIKPWMPNGIFYSVYDVASGNWQA 344 (781)
T ss_dssp CSGGGCCCTTSCCEEEEEEEETTTTEECC
T ss_pred cccccccccCCCceEEEEEecCCCCcccC
Confidence 0 123555566 56889975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 587 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 2e-89 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 8e-73 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 2e-27 | |
| d1y4wa1 | 164 | b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus a | 1e-22 | |
| d1uypa1 | 138 | b.29.1.19 (A:295-432) Beta-fructosidase (invertase | 2e-05 | |
| d1wl7a1 | 312 | b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermo | 1e-04 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 278 bits (711), Expect = 2e-89
Identities = 100/360 (27%), Positives = 142/360 (39%), Gaps = 44/360 (12%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSGPYDINS--CWSGSVTILPGDKP----------FILYTGI---------- 148
AL G + +SGS + +YT
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 149 --DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPD 203
QQ Q++A D L + NPV+ P + FRDP W
Sbjct: 123 QTVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDES 179
Query: 204 GRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG- 262
+W V I +Y S + W + + G+WECP + + ++
Sbjct: 180 QKWV--VVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNST 237
Query: 263 --VDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V TS LNPG S Y +G +D DT + GNS D+G
Sbjct: 238 KWVITSGLNPGGPPGTVGS-----GTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPD 292
Query: 320 FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQWP 377
FYA+ + + N V W N + W +PR + L G + LVQ P
Sbjct: 293 FYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 233 bits (594), Expect = 8e-73
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 37/327 (11%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
+ +YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHL 60
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWV 173
A + + +SGS K F++YT + D+V
Sbjct: 61 PVA--LYPDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFV 117
Query: 174 KFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWT 232
K+ GNPV++ P FRDP +G WR+++G D + G +Y S D HW
Sbjct: 118 KYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHW- 174
Query: 233 KLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292
K + ++ + T ECPD+ + G K +L S+ S + +G
Sbjct: 175 KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGE 219
Query: 293 YDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANE--SDSTQDDI 350
+ + L FYA++TFF +R V+ W
Sbjct: 220 LK--------EGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTK 269
Query: 351 DKGWSGVQTVPRAIWLDKSGKQLVQWP 377
+GW+GV ++PR ++++ +L P
Sbjct: 270 REGWNGVMSLPRELYVE--NNELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 113 bits (283), Expect = 2e-27
Identities = 44/358 (12%), Positives = 88/358 (24%), Gaps = 85/358 (23%)
Query: 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGDK--MIWAHSVSYDLINWIHLSHALCPSGPY 123
+ + +G Y G + +F M + + +W + S +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 124 DINSC--------WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL--SDPLLKDWV 173
D N WSGS T K + YT Q L + + +
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 174 KFSGNPVMTPPNGV-----------------KDDMFRDP------TTAWQAPDGRWRVLV 210
+ +G + RDP + +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 211 G-----------------------------------GQIDNEGMAFVYWSWDFIHWTKLD 235
G ++ N + + + D+ +
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTY-- 293
+ S T E ++F + NG + T K ++ + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 294 DPQMDIFSPDTDFHGN--SNDLRYDYGKF-YASKTFFDSAKNRRVLWAWANESDSTQD 348
+ + P + G DL + F Y+ + N V+ ++ D
Sbjct: 349 NSLTGPYKPL-NKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYAD 405
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 164 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 92.7 bits (230), Expect = 1e-22
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 452 GPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDP 511
F + + A+ + TE+T + + + + L + S E +G
Sbjct: 47 STFAIALRASANFTEQTLVGYD---FAKQQIFLDRTHSGDVSFDETFASVYHGPL--TPD 101
Query: 512 HHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNA 571
G V L VD S VE F +G+T +T +++P + H + G + +
Sbjct: 102 STGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPS---SDAVHARLASTGG-TTEDVRADI 157
Query: 572 WNMN 575
+ +
Sbjct: 158 YKIA 161
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 42.7 bits (100), Expect = 2e-05
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 511 PHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPK 545
+R+ +D VE F + R++P+
Sbjct: 80 EDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHPE 113
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} Length = 312 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 23/196 (11%), Positives = 52/196 (26%), Gaps = 21/196 (10%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL-------- 117
W +DP +++F+ G + S D ++W ++
Sbjct: 23 WAHDPV-IAKEGSRWYVFH--------TGSGIQIKTS--EDGVHWENMGRVFPSLPDWCK 71
Query: 118 CPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSG 177
D + W+ + G + LY + G+ + + N + ++
Sbjct: 72 QYVPEKDEDHLWAPDICFYNGI--YYLYYSVSTFGKNTSVIGLATNRTLDPRDPDYEWKD 129
Query: 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237
+ + DP + W + + + +L
Sbjct: 130 MGPVIHSTASDNYNAIDPNVVFDQEGQPWLSFGSFWSGIQLIQLDTETMKPAAQAELLTI 189
Query: 238 LYSVQETGMWECPDIF 253
+E E P I
Sbjct: 190 ASRGEEPNAIEAPFIV 205
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 99.86 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.72 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 99.7 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.67 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.52 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.48 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.36 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.31 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.25 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.16 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.17 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.76 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.73 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.7 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.7 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.52 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.51 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.3 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.55 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 92.24 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 87.87 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 85.77 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 85.33 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 82.21 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 81.31 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.5e-79 Score=626.16 Aligned_cols=284 Identities=34% Similarity=0.693 Sum_probs=252.9
Q ss_pred cccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeE
Q 007857 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSV 133 (587)
Q Consensus 54 ~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsa 133 (587)
|||+|||+|+.||||||||++|++|+|||||||||+++.|| +++||||+|+|||||+++|+||.|+. |.+|||||||
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsa 78 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWG-NICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSA 78 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSC-SCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCC-CcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEE
Confidence 89999999999999999999999999999999999999999 99999999999999999999999986 6789999999
Q ss_pred EEccCCeEEEEEeeecC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEE
Q 007857 134 TILPGDKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 134 v~~~dg~~~l~YTg~~~-----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
++ .+|++++|||++.. ...+.|++|+|+|+ ++|+|++.||||..++.....+||||+| |. ++|+|+|
T Consensus 79 v~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M 150 (294)
T d1uypa2 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRM 150 (294)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEE
T ss_pred Ee-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEE
Confidence 98 59999999998743 24678889999886 8999999999998766656789999996 55 4799999
Q ss_pred EEeeee-CCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeee
Q 007857 209 LVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287 (587)
Q Consensus 209 ~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~ 287 (587)
++|++. ++.|++++|+|+||++|++.+. +...+.++||||||||+|+ + ||||++|.+....+.
T Consensus 151 ~~g~~~~~~~G~i~ly~S~Dl~~W~~~g~-l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~~ 214 (294)
T d1uypa2 151 VLGSGKDEKIGRVLLYTSDDLFHWKYEGA-IFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSVL 214 (294)
T ss_dssp EEEEEETTTEEEEEEEEESSSSSEEEEEE-EEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEEE
T ss_pred EEEeeecCCccEEEEEEcCCccceeEecc-ceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCee
Confidence 999977 5678999999999999999985 4455567899999999997 5 999999998888999
Q ss_pred EEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCC--CCCCCCCcceeeeeeEEE
Q 007857 288 YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGWSGVQTVPRAI 364 (587)
Q Consensus 288 Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~--~~~~~~gW~g~ltlPReL 364 (587)
|++|++++. +|+++. .++||+|+ |||+|||.+ ++||||||||++|.+. .++...+|+|+|||||||
T Consensus 215 y~~G~~~~~--~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel 283 (294)
T d1uypa2 215 FSMGELKEG--KLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPREL 283 (294)
T ss_dssp EEEEEEETT--EEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEE
T ss_pred eEeeeecCC--eEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEE
Confidence 999999974 898765 46899999 999999987 4899999999998765 345567999999999999
Q ss_pred EEecCCCeEEEcc
Q 007857 365 WLDKSGKQLVQWP 377 (587)
Q Consensus 365 ~l~~dg~~L~q~P 377 (587)
+|+ +| +|+|+|
T Consensus 284 ~l~-~~-~L~q~P 294 (294)
T d1uypa2 284 YVE-NN-ELKVKP 294 (294)
T ss_dssp EEE-TT-EEEEEE
T ss_pred EEE-CC-EEEecC
Confidence 996 56 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=1.8e-77 Score=631.40 Aligned_cols=310 Identities=31% Similarity=0.573 Sum_probs=253.3
Q ss_pred CCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-cC-CCC
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YD-INS 127 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-~d-~~G 127 (587)
|+++|||+|||+||.||||||||++|++|+|||||||||+++.|| +|+||||+|+|||||+++|+||.|+.. .| ..|
T Consensus 3 y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g-~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~ 81 (353)
T d1y4wa2 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWG-NISWGHAISEDLTHWEEKPVALLARGFGSDVTEM 81 (353)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBE
T ss_pred CCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCC-CeEEEEEEeccccceeECCccccCCccCcCCCCc
Confidence 679999999999999999999999999999999999999999999 999999999999999999999999853 33 457
Q ss_pred eEeeeEEEccCC----------eEEEEEeeecC------------CCceeEEEEEecCCCCCccceeeee-cCCcEEcCC
Q 007857 128 CWSGSVTILPGD----------KPFILYTGIDA------------SGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPP 184 (587)
Q Consensus 128 v~SGsav~~~dg----------~~~l~YTg~~~------------~~~~~q~~A~s~D~~d~~l~~w~k~-~~nPvi~~p 184 (587)
||||||+++.+| .++++|||+.. ...|.|++|+|.|.+ ++|+|+ +.||||..+
T Consensus 82 ~~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~ 157 (353)
T d1y4wa2 82 YFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNP 157 (353)
T ss_dssp EEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSC
T ss_pred cccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCC
Confidence 999999986443 47889999743 235789999998865 788886 579999654
Q ss_pred C-CC--CCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCcc
Q 007857 185 N-GV--KDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTI 261 (587)
Q Consensus 185 ~-~~--~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~ 261 (587)
+ +. ...+||||+|+|+ +++.|+|++++ ....|+++||+|+||.+|++.+.+......++||||||||+|+.++
T Consensus 158 ~~~~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~-- 233 (353)
T d1y4wa2 158 PSPYEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS-- 233 (353)
T ss_dssp CTTCGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT--
T ss_pred CCCCcccccccCCCceEEE-CCCCEEEEEEe-ecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC--
Confidence 3 32 3479999998777 34444444443 3456889999999999999998765545567899999999997554
Q ss_pred ceeeccCCCCceeEEEEeeCC-------CCeeeEEEEeecCCCCeeccCCCCC--CCCCceecccCC-CcccceEecCCC
Q 007857 262 GVDTSVLNPGVKHVLKTSLFS-------DKHDYYVLGTYDPQMDIFSPDTDFH--GNSNDLRYDYGK-FYASKTFFDSAK 331 (587)
Q Consensus 262 g~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~-fYA~qt~~d~~~ 331 (587)
+.+.+|||..+... ...+.|++|+||+. +|+|+.+.. .....++||+|+ |||||||.++++
T Consensus 234 -------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~ 304 (353)
T d1y4wa2 234 -------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSL 304 (353)
T ss_dssp -------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCG
T ss_pred -------CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCC
Confidence 23458999887532 34689999999975 787765321 223457899999 999999998767
Q ss_pred CcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecCC--CeEEEcc
Q 007857 332 NRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSG--KQLVQWP 377 (587)
Q Consensus 332 grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~dg--~~L~q~P 377 (587)
|||||||||+++++..+..+.+|+|+|||||||+|+++| .+|+|+|
T Consensus 305 gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 305 NDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 999999999999988777889999999999999998653 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.2e-24 Score=231.96 Aligned_cols=275 Identities=15% Similarity=0.135 Sum_probs=182.4
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCC--CceEEEEEeCCCcccEeccCCCCCCC--------ccCCCCeEeeeEEE
Q 007857 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGD--KMIWAHSVSYDLINWIHLSHALCPSG--------PYDINSCWSGSVTI 135 (587)
Q Consensus 67 ~nDPnG~~~-~~G~YHlfyQ~~P~~~~~g~--~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~d~~Gv~SGsav~ 135 (587)
+.|++|-.. ++|.+++|++..|....+.. ...+.|+.|+||.||++.+.++.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 789988554 79999999987764332221 23356666899999999998775442 22344679999998
Q ss_pred ccCCeEEEEEeeecCC--CceeEEEE----EecCCCCCccceeeeecCCcEEcCCCC--C---------------CCCCc
Q 007857 136 LPGDKPFILYTGIDAS--GQQVQNLA----MPENLSDPLLKDWVKFSGNPVMTPPNG--V---------------KDDMF 192 (587)
Q Consensus 136 ~~dg~~~l~YTg~~~~--~~~~q~~A----~s~D~~d~~l~~w~k~~~nPvi~~p~~--~---------------~~~~f 192 (587)
..||+++|||||+... ..|++..| .+++. ...|++...+++|-.|++ + +..+|
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~----~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~f 212 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDS----SLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTL 212 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSS----CEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCC
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeecCC----cceeecccCCceeecCCCccceeeecccccCCCCCCCcccc
Confidence 7899999999997532 22322222 12232 277887766666633322 1 24589
Q ss_pred cCCeEEeecCCCeEEEEEeeeeC-C-----------------------------------------cceE-EEEEeCCCC
Q 007857 193 RDPTTAWQAPDGRWRVLVGGQID-N-----------------------------------------EGMA-FVYWSWDFI 229 (587)
Q Consensus 193 RDP~V~w~~~~g~~~m~~g~~~~-~-----------------------------------------~G~~-~ly~S~Dl~ 229 (587)
|||+| |. .+|+|||++++... . .|.+ +++.|+|+.
T Consensus 213 RDP~v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~ 290 (440)
T d1oyga_ 213 RDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYT 290 (440)
T ss_dssp EEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSS
T ss_pred cCCce-ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCcc
Confidence 99995 45 37999999987531 0 1333 455699999
Q ss_pred CCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC-------CCCe----eeEEEEeecCCCC
Q 007857 230 HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF-------SDKH----DYYVLGTYDPQMD 298 (587)
Q Consensus 230 ~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~-------~~~~----~~Y~vG~~d~~~~ 298 (587)
+|+..++++.+.....|||||++|+++ | ||+|+.|.+ ..+. ..++||+ .-.+
T Consensus 291 ~We~~~pLl~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vsd--sl~G 353 (440)
T d1oyga_ 291 LKKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSN--SLTG 353 (440)
T ss_dssp EEEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEES--STTC
T ss_pred cceecCcceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEECC--CCCC
Confidence 999987655554556799999999998 7 999987742 1111 2244553 3345
Q ss_pred eeccCCCC-CCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecC
Q 007857 299 IFSPDTDF-HGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369 (587)
Q Consensus 299 ~F~~~~~~-~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~d 369 (587)
.|+|.+.. .........|+++ +|+..+|.+....++++.+||.++.... ...|.++-+.+|.|+-+
T Consensus 354 py~PlN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~~-----~~g~t~APt~~l~l~g~ 421 (440)
T d1oyga_ 354 PYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-----DKQSTFAPSFLLNIKGK 421 (440)
T ss_dssp CCEEGGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSCS-----SCCCEECBCEEEEEETT
T ss_pred CCeecCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCccc-----ccCCccCCcEEEEEcCC
Confidence 78776521 0001112457788 6999999876557889999999997432 23578888888999743
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=99.86 E-value=1e-20 Score=175.88 Aligned_cols=114 Identities=22% Similarity=0.356 Sum_probs=88.7
Q ss_pred cEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCccccee--EEEecC-CCCeEEEEEEEeCceEEE
Q 007857 453 PFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGA--FVDIDP-HHGKVSLRSLVDHSIVES 529 (587)
Q Consensus 453 ~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~--~~~~~~-~~~~~~LrifvD~S~vEv 529 (587)
.|||.|++++|+.|+|.|+||..+ +. +.+||++|+.... .+.++. ..++.+ .++.++||||||+|+|||
T Consensus 48 ~fgl~lr~s~d~~e~t~i~yd~~~---~~---l~vDRs~sg~~~~--~~~~~~~~~~~~~~~~~~~l~Lri~vD~ssvEv 119 (164)
T d1y4wa1 48 TFAIALRASANFTEQTLVGYDFAK---QQ---IFLDRTHSGDVSF--DETFASVYHGPLTPDSTGVVKLSIFVDRSSVEV 119 (164)
T ss_dssp EEEEEEEECTTSSSCEEEEEETTT---TE---EEEECTTSSCCTT--CTTTSCEEEEECCCCTTSEEEEEEEEETTEEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEECCC---CE---EEEECCCCCCCcc--cccccceeEEecccCCCCeEEEEEEEECcEEEE
Confidence 699999999999999999999542 43 4569999975321 122221 222222 368999999999999999
Q ss_pred EcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccccc
Q 007857 530 FAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQAR 578 (587)
Q Consensus 530 FvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~~ 578 (587)
|+|||+.|||+|+||... ..+|.++++| +.+++.++++|+|++++
T Consensus 120 F~NdG~~~~T~~~fp~~~---~~~i~~~s~g-g~~~~~~l~v~~lksiW 164 (164)
T d1y4wa1 120 FGGQGETTLTAQIFPSSD---AVHARLASTG-GTTEDVRADIYKIASTW 164 (164)
T ss_dssp EETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEEEBCCCC
T ss_pred EECCCeEEEEEEecCCCC---CCEEEEEEcC-CeEEEEEEEEEeccccC
Confidence 999999999999999765 5677777776 46788999999999974
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=8.3e-17 Score=165.29 Aligned_cols=156 Identities=18% Similarity=0.221 Sum_probs=116.1
Q ss_pred cceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCC---ccCCCCeEeeeEEEccCCeEEEEEee
Q 007857 72 GPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSG---PYDINSCWSGSVTILPGDKPFILYTG 147 (587)
Q Consensus 72 G~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~---~~d~~Gv~SGsav~~~dg~~~l~YTg 147 (587)
|+++++|+|||+|+..- ..+ .++||+|+|+|++||++.+ +++.|+. .++..||++++++. .+|+++|+||+
T Consensus 49 ~~i~~~g~~~ll~r~~~---~~~-~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~-~~d~yym~yt~ 123 (327)
T d1vkda_ 49 AVVPYNGEFVGVFRIDH---KNT-RPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDTYYITFCT 123 (327)
T ss_dssp EEEEETTEEEEEEEEEE---TTS-CEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTEEEEEEEE
T ss_pred EEEEECCEEEEEEEecC---CCC-ceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEE-ECCEEEEEEEe
Confidence 68999999999998642 345 8999999999999999764 5677764 35677999999988 58999999998
Q ss_pred ecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee---CCcceEEEEE
Q 007857 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---DNEGMAFVYW 224 (587)
Q Consensus 148 ~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~---~~~G~~~ly~ 224 (587)
.. ....+++|.|+|+ ++|+|.. +++. ..-||+.++....+|+|+|+..... ...|.+.+.+
T Consensus 124 ~~--~~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~ 187 (327)
T d1vkda_ 124 DD--HGPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSE 187 (327)
T ss_dssp ES--SSEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEEEEE
T ss_pred cC--CCcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceEEEEc
Confidence 64 4567899999997 8999973 3321 2346877433334899999964432 2345689999
Q ss_pred eCCCCCCEEccccCccCCCCCcccc
Q 007857 225 SWDFIHWTKLDHPLYSVQETGMWEC 249 (587)
Q Consensus 225 S~Dl~~W~~~~~~~~~~~~~~~wEC 249 (587)
|+||.+|+....++. ....+.||+
T Consensus 188 S~Dl~~W~~~~~v~~-~~~~~~wd~ 211 (327)
T d1vkda_ 188 SPDMIHWGNHRFVLG-RSSYNWWEN 211 (327)
T ss_dssp ESSSSCBEEEEEEEC-CCSSCGGGS
T ss_pred CCCcccccccceecc-cCCCCceee
Confidence 999999998754333 233455654
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.70 E-value=3e-16 Score=141.24 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=56.3
Q ss_pred EeecCCCCCccCCCCcccceeEEEecCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeE
Q 007857 485 MCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSV 564 (587)
Q Consensus 485 ~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~ 564 (587)
+.+||++++...+. .....+ ..++.++||||||+|+||||+|||+ |||+|+||... ...+.+.++
T Consensus 60 l~~dR~~s~~~~~~-----~r~~~~-~~~~~~~LrIfvD~SsvEiFiNdg~-v~t~rvfP~~~---~~~i~~~~~----- 124 (138)
T d1uypa1 60 LIVDTTRSGVSGGE-----VRKSTV-EDEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV---YNILSVKSN----- 124 (138)
T ss_dssp EEEECTTSSTTCCC-----EEEEEC-CCCSSEEEEEEEETTEEEEEETTTE-EEEEECCCSSC---CCEEEEEEE-----
T ss_pred EEEEeeccccCCCc-----eEEEEc-CCCCcEEEEEEEEeeEEEEEECCCE-EEEEEEcCCCC---CcEEEEEec-----
Confidence 34699998743221 112222 2367899999999999999999996 99999999875 345655432
Q ss_pred EEeEEEeeecccccc
Q 007857 565 VISSLNAWNMNQARL 579 (587)
Q Consensus 565 ~v~~l~~w~~~~~~~ 579 (587)
..++++|+|+++++
T Consensus 125 -~~~~~~~~Lksiw~ 138 (138)
T d1uypa1 125 -QVKLEVFELENIWL 138 (138)
T ss_dssp -EEEEEEEEECCSCC
T ss_pred -ccEEEEEEcccccC
Confidence 12467899999864
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.67 E-value=1.5e-15 Score=152.94 Aligned_cols=191 Identities=14% Similarity=0.124 Sum_probs=128.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc-------CCCCeEeeeEEEccCC
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGD 139 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------d~~Gv~SGsav~~~dg 139 (587)
++||. +++++|+||||...... ..++.+++|+||+||+.++.++.+.... ...++|.++++. .+|
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~------~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 81 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE------ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 81 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT------SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred ccCCE-EEEECCEEEEEEecCCC------CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECC
Confidence 56998 99999999999874321 3458899999999999988777654321 135799999887 599
Q ss_pred eEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 140 KPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
+++|||++.... ..+.+++|+|++.-. -.|+.. ++++..... .....+||.|++. ++|++||+.+... .|
T Consensus 82 ~yylyy~~~~~~~~~~~i~~a~s~~~~~---Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~D-~dG~~Y~~~~~~~--~~ 152 (291)
T d1uv4a1 82 KYWLYYSVSSFGSNTSAIGLASSTSISS---GGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFW--SG 152 (291)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTTT---TCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBST--TC
T ss_pred EEEEEEEecCCCCCcceEEEEEeCCCCC---CCCCcC--ccccccccC-CCCCccCceEEEe-cCCcEEEEecccC--Cc
Confidence 999999987543 456778999977411 258763 344432221 2356789997665 7899999997542 23
Q ss_pred eEEEEEe-CCCCCCEEcccc--Cc-cCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC---CCeeeEEEE
Q 007857 219 MAFVYWS-WDFIHWTKLDHP--LY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLG 291 (587)
Q Consensus 219 ~~~ly~S-~Dl~~W~~~~~~--~~-~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG 291 (587)
+.+++. .|. |...+.+ +. ......+.|||.+|+.+ | +++|++|... .....|.++
T Consensus 153 -i~i~~l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~~~~~~~~~~y~v~ 214 (291)
T d1uv4a1 153 -IKLTKLDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFDKCCDGVNSTYKIA 214 (291)
T ss_dssp -EEEEEECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEECSSSSSCCEEEEE
T ss_pred -eEEEeecccc--ccCcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecCcccCCCCCCceeE
Confidence 445553 443 3333322 11 22345689999999997 6 8999998642 123445554
Q ss_pred e
Q 007857 292 T 292 (587)
Q Consensus 292 ~ 292 (587)
-
T Consensus 215 ~ 215 (291)
T d1uv4a1 215 Y 215 (291)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.52 E-value=1.7e-13 Score=138.22 Aligned_cols=182 Identities=14% Similarity=0.097 Sum_probs=119.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEccCC
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~Gv~SGsav~~~dg 139 (587)
+.||+ +++++|+||||... .++...+|+||+||+.++.+|.+... ....++|++.++. .+|
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~----------~gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 74 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG----------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE----------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred CCCCE-EEEECCEEEEEEee----------CCEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcC
Confidence 46998 89999999998642 23567799999999999988865422 2235799999987 599
Q ss_pred eEEEEEeeecCC-CceeEEEEEecCCC-CCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 140 KPFILYTGIDAS-GQQVQNLAMPENLS-DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~~A~s~D~~-d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
++++||++.... ....+++|++.... +.....|++. .++....+......++||.|++. ++|++||+.+....
T Consensus 75 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~d-~dG~~Yl~~~~~~~-- 149 (318)
T d1gyha_ 75 LFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIAD-DHGQVWMSFGSFWG-- 149 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEEC-TTSCEEEEECBSTT--
T ss_pred ceEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceEee-cCCcEEEeccCCCC--
Confidence 999999987643 44566777764321 1122577764 23444333445678899996554 78999999986432
Q ss_pred ceEEEEEe-CCCC------CCEEccc----cCcc--CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 218 GMAFVYWS-WDFI------HWTKLDH----PLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 218 G~~~ly~S-~Dl~------~W~~~~~----~~~~--~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+ +.+.+. .|+. .|..... ++.. .....++|||.+|+.+ | +++|++|..
T Consensus 150 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 150 G-LKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp C-EEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred C-eeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 2 223332 3332 2222211 1111 1124589999999998 6 899998864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.48 E-value=5.6e-13 Score=134.69 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=119.9
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--------ccCCCCeEeeeEEEcc
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--------PYDINSCWSGSVTILP 137 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~d~~Gv~SGsav~~~ 137 (587)
|..||. +++++|+||||.. + .++..++|+||+||+.++.+|.+.. ..+..++|++.++. .
T Consensus 23 ~~~DP~-i~~~~g~yY~~~t--------~--~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~ 90 (312)
T d1wl7a1 23 WAHDPV-IAKEGSRWYVFHT--------G--SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-Y 90 (312)
T ss_dssp BCSSCE-EEEETTEEEEEES--------E--ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred CcCCCE-EEEECCEEEEEEe--------c--CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-e
Confidence 668998 9999999999853 1 2477899999999999998876432 24567899999987 5
Q ss_pred CCeEEEEEeeecCC-CceeEEEEEecC--CCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 138 GDKPFILYTGIDAS-GQQVQNLAMPEN--LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 138 dg~~~l~YTg~~~~-~~~~q~~A~s~D--~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
+|+++||||+.... ....+++|.+.. ..++. ..|++. .|++..+. .+...++||.+++. ++|++||+.+...
T Consensus 91 ~g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~~~~~-~~~~~~iD~~~f~d-~dG~~y~~~~~~~ 165 (312)
T d1wl7a1 91 NGIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPD-YEWKDM--GPVIHSTA-SDNYNAIDPNVVFD-QEGQPWLSFGSFW 165 (312)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCSCTTSTT-CCCEEE--EEEEEECT-TSSSCCCSCEEEEC-TTSCEEEEECBST
T ss_pred CCEEEEEEEeecCCcccceeeEEEEecccCCCCc-cccccc--cceecCCC-CCCCCcCCCceeEc-cCCcEEEeecCCC
Confidence 99999999987653 344556665432 22222 456653 45553322 23467899996554 7899999987642
Q ss_pred CCcceEEEEE-eCCCCCCEEccccCcc---CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 215 DNEGMAFVYW-SWDFIHWTKLDHPLYS---VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 215 ~~~G~~~ly~-S~Dl~~W~~~~~~~~~---~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+.+.+++ +.|..........+.. .......|+|.+|+.+ | +++|++|..
T Consensus 166 ---~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 166 ---SGIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp ---TCEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred ---CceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 2344554 3343322211122211 1234578999999987 6 899998864
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.36 E-value=6e-11 Score=119.94 Aligned_cols=178 Identities=15% Similarity=0.158 Sum_probs=114.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC------ccCCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG------PYDINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~------~~d~~Gv~SGsav~~~d 138 (587)
|+..||. +++++|+||||+.-+. + ...+...+|+||+||+.++.+|.... ......+|.+.++. .+
T Consensus 9 ~~~aDP~-vi~~~~~yY~~~tt~~----~--~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 80 (317)
T d1yrza2 9 GFHPDPS-IVRVGDDYYIATSTFE----W--FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 80 (317)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C--CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-EC
Confidence 4668998 8999999999975321 1 12356689999999999988775442 23345689999877 59
Q ss_pred CeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|++||+|++... .....+.+|.+++.. ..|+ .|+.. .....||.+++. ++|+.||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~----~~~~~------~~~~iDp~~f~D-~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWS----DPIYL------NSSGFDPSLFHD-DDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCC----CCEEC------CCSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCcc----ceeee------cCCccCCcEEEe-cCCCEEEEEeccC
Confidence 999999997543 123445567776643 2353 23332 234679996554 7899999987643
Q ss_pred CCc-----ceEEEEE-eCCCCCCEEccccC--ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 215 DNE-----GMAFVYW-SWDFIHWTKLDHPL--YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 215 ~~~-----G~~~ly~-S~Dl~~W~~~~~~~--~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
... ..+.+.. +.+ .++..+.+. .........|+|.+|+.+ | +++|++|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 146 YRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp CCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 211 1122222 333 344444322 222334578999999987 6 8888888753
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.31 E-value=1.6e-10 Score=116.69 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=116.4
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC------ccCCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG------PYDINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~------~~d~~Gv~SGsav~~~d 138 (587)
|+..||. +++++|+|+||+..... ...+..++|+||+||+.++.+|.... .....++|.+.++. .+
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~------~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 79 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEW------FPGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HD 79 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE------ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEecCCC------CCCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-EC
Confidence 4568998 99999999999864321 12356689999999999987775332 23345799999987 69
Q ss_pred CeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|+++|+|+..... ..+.+.+|.+++..+ .|+.. ..+ .....||.+++. ++|+.+|+.+...
T Consensus 80 g~yylyys~~~~~~~~~~~~~~~~a~a~~p~G----p~~~~---~~~-------~~~~~D~~~~~d-~dg~~~~~~~~~~ 144 (321)
T d1y7ba2 80 GKFWLIYTDVKVTDGMWKDCHNYLTTCESVDG----VWSDP---ITL-------NGSGFDASLFHD-NDGKKYLVNMYWD 144 (321)
T ss_dssp TEEEEEEEEESCCSSSCCCEEEEEEEESSTTS----CCCCC---EEC-------CCSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeeccCCCCccceeeEeeecCCCCC----Ccccc---eee-------cccccCCcEEEE-cCCCEEEEEeccC
Confidence 9999999986542 345667888877532 34321 111 124579996554 7889888886543
Q ss_pred C-----CcceE-EEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 215 D-----NEGMA-FVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 215 ~-----~~G~~-~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
. ..+.+ +...++|..........+.........|.|.+|+-+ | +++|++|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~ 202 (321)
T d1y7ba2 145 QRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEG 202 (321)
T ss_dssp CCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCC
Confidence 1 11222 233456665554332223333334567999999976 5 888887764
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.25 E-value=8.8e-10 Score=111.52 Aligned_cols=180 Identities=16% Similarity=0.157 Sum_probs=116.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC------ccCCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG------PYDINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~------~~d~~Gv~SGsav~~~d 138 (587)
|+..||. +++++|+||||+.-. .+ ..++..++|+||+||+.++.+|.... ..+..++|.+.+.. .+
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~-----~~-~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~-~~ 80 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTF-----EW-FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SD 80 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCB-----TE-ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEcCC-----CC-CCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEE-EC
Confidence 5678998 999999999998522 11 22466789999999999887764322 23446799999876 69
Q ss_pred CeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
|+++|+|+..... ......+|.+++.. -.|++ |+.. .....||.+++. .+|+.||+.+...
T Consensus 81 G~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~------~~~~~dp~~f~d-~dG~~Yl~~~~~~ 145 (322)
T d2exha2 81 GKFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYL------NSSGFDPSLFHD-EDGRKYLVNMYWD 145 (322)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEEC------CCSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEe------cCCCCCCCeEEE-cCCCEEEEecccC
Confidence 9999999976532 22344566665542 23432 3332 124569996554 7899999987653
Q ss_pred CC---cceEEEE-EeCCCCCCEEccccC--ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 215 DN---EGMAFVY-WSWDFIHWTKLDHPL--YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 215 ~~---~G~~~ly-~S~Dl~~W~~~~~~~--~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.. .+...++ ...+...|+..+++. .........|.|.+|+.+ | +++|++|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~~ 204 (322)
T d2exha2 146 HRVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 204 (322)
T ss_dssp CCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CccCcCCccceEEeeecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCCC
Confidence 21 1111222 223344566665432 222344578999999987 6 8889888753
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=8.3e-11 Score=119.94 Aligned_cols=123 Identities=7% Similarity=0.020 Sum_probs=94.8
Q ss_pred eCCCcccEec-cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEc
Q 007857 104 SYDLINWIHL-SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (587)
Q Consensus 104 S~Dlv~W~~~-~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~ 182 (587)
|++++ |++. .+.|.|...+...++|.++|++ .+|+++|+|.+.+.++...+++|+|+|+ +||+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 55554 5443 3668888766667899999988 5999999999877778888999999997 8999975 57774
Q ss_pred CC---CCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEcccc
Q 007857 183 PP---NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (587)
Q Consensus 183 ~p---~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~ 237 (587)
+. ..++...++||.|++. +++|||++.+.. ...++.+++|+|+++|++.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~ 147 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNA 147 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecC-CCcEEEEEEecCcchheecCCc
Confidence 32 1244568899997665 689999987753 3346789999999999998753
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.17 E-value=7.9e-06 Score=80.52 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=87.7
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcc--cEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecC
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN--WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDA 150 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~--W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~ 150 (587)
+.+++|+|||||.....+. + ....++|+|+|... |+..+..+.+....+ ....++++++++||+.+|+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~~--~-~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~ 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFGS--N-TSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS 151 (291)
T ss_dssp EEEETTEEEEEEEECCTTC--S-CEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT
T ss_pred EEEECCEEEEEEEecCCCC--C-cceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC
Confidence 7889999999998765432 3 56789999999765 998765443332222 2346889988888999999965321
Q ss_pred CCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC----Ccc-eEEEEE
Q 007857 151 SGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG-MAFVYW 224 (587)
Q Consensus 151 ~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~----~~G-~~~ly~ 224 (587)
.+.++. +.|. ...... ...+...+. ....+.-|.+ ++ .+|+|||++++..- ..+ ++.+++
T Consensus 152 ----~i~i~~l~~~~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~ 217 (291)
T d1uv4a1 152 ----GIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAYGR 217 (291)
T ss_dssp ----CEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEEEE
T ss_pred ----ceEEEeecccc-----ccCcCc-eeEEEecCC--CCccccccEE-EE-ECCEEEEEEecCcccCCCCCCceeEEEE
Confidence 133333 2232 111211 112332221 1233456884 45 58999999977531 112 467889
Q ss_pred eCCCCC-CEEc
Q 007857 225 SWDFIH-WTKL 234 (587)
Q Consensus 225 S~Dl~~-W~~~ 234 (587)
|+++.. |+..
T Consensus 218 s~~~~GP~~~~ 228 (291)
T d1uv4a1 218 SKSITGPYLDK 228 (291)
T ss_dssp ESSTTCCCBCT
T ss_pred cCCCCCCCccC
Confidence 998875 7544
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.76 E-value=0.00018 Score=71.40 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=53.4
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC--------CCCccc
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ--------ETGMWE 248 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~--------~~~~wE 248 (587)
.||||. .++-||.|+.. ++.|||+........| +.+++|+||.+|+..+..+.... ..+..=
T Consensus 3 ~NPi~~-------~~~aDP~v~~~--~~~yY~~~tt~~~~~g-~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 72 (322)
T d2exha2 3 KNPILT-------GFHPDPSICRV--GDDYYIAVSTFEWFPG-VRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVW 72 (322)
T ss_dssp ESCSBC-------SSCCSCEEEEE--TTEEEEEECCBTEESB-CEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBC
T ss_pred cCCCCC-------CCCCCCEEEEE--CCEEEEEEcCCCCCCC-cEEEECCCcCCcEEcccccccccccccCCCcccCCcc
Confidence 489983 24679997654 6789988654321123 67899999999999876443211 122334
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
.|+++..+ | +|+|.++.
T Consensus 73 APev~~~~--G-------------~yylyys~ 89 (322)
T d2exha2 73 APHLSYSD--G-------------KFWLIYTD 89 (322)
T ss_dssp SCEEEEET--T-------------EEEEEEEE
T ss_pred cceEEEEC--C-------------EEEEEEEe
Confidence 59999987 6 88888775
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.73 E-value=0.0002 Score=70.54 Aligned_cols=128 Identities=9% Similarity=0.040 Sum_probs=85.4
Q ss_pred ceEECCEEEEEEEECCC-CCCCCCCceEEEEEeCCCcccEec--cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 73 PMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~-~~~~g~~~~Wgha~S~Dlv~W~~~--~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
++..+|++++||..+-. ...-+......+|+|+|+.+|+.. .++|.+.......+.-++.|.. ++|+++|++.+..
T Consensus 78 av~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~~ 156 (294)
T d1uypa2 78 AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGK 156 (294)
T ss_dssp EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred EEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEeee
Confidence 45589999999986421 111121455688999999999986 3455544333334567888766 5899999887765
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
.++.....+..|+|+ ++|+.. .|+...+.. ..+.-|- ++. -+++|+|++...
T Consensus 157 ~~~~G~i~ly~S~Dl-----~~W~~~--g~l~~~~~~---~~~ECPd-lf~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 157 DEKIGRVLLYTSDDL-----FHWKYE--GAIFEDETT---KEIECPD-LVR-IGEKDILIYSIT 208 (294)
T ss_dssp TTTEEEEEEEEESSS-----SSEEEE--EEEEEETTC---SCEEEEE-EEE-ETTEEEEEEEET
T ss_pred cCCccEEEEEEcCCc-----cceeEe--ccceeCCCC---Cceeece-EEE-eCCeeEEEEEec
Confidence 445556677888886 899874 466654322 3455677 444 588999998764
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.70 E-value=0.00013 Score=71.87 Aligned_cols=140 Identities=9% Similarity=-0.022 Sum_probs=96.4
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
+|..++.++|+|||+++--..+ .|. ..+.+.+.+++..+|+..|.-+ -|+.++.+.. .+|++++-||..
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s-~s~v~lf~~~g~~~f~~~~~p~--------~glEDPrvt~-i~g~lv~~~t~~ 99 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWA-ASHVRLFEETGKDEFTAVPELS--------WELEDPYIAK-INNEMIFGGTRV 99 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSS-CCEEEEEEEEETTEEEECTTCC--------BSCEEEEEEE-ETTEEEEEEEEE
T ss_pred cCCcEEEECCEEEEEEEEEccC-cce-EEEEEEEEecCCcceEECCccc--------ccCCCCCEEe-ECCEEEEEEEEe
Confidence 5766788999999999987654 345 6777888999999999764311 3788899887 589999999987
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEE-cCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCC
Q 007857 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227 (587)
Q Consensus 149 ~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D 227 (587)
... ....++|.+.+. ++|.+. .|++ ..|++ .+|-- +..-.+|+|.|+.--+....|.+.+..++|
T Consensus 100 ~~~-~~~~~~~~t~~~-----r~~~~~--l~~f~~gp~~-----~Kdi~-L~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~ 165 (310)
T d2b4wa1 100 RKN-GNAILSYYGYFY-----RGTPDE--LTYFTRGPGC-----MKDIR-VLQLQDGRLGVFSRPRVGRKASIGFVILNS 165 (310)
T ss_dssp C------CCCEEEEEE-----EEETTE--EEEEEECCTT-----CCCCE-EEECTTSCEEEEECCCC---CCEEEEEESC
T ss_pred cCC-CCcceEEEeeee-----ecchhc--CceeecCCCc-----cccEE-eEEeeCCEEEEEEccccCCCCeeEEEEeCC
Confidence 642 244456666654 666543 4666 33432 34544 334469999999876655567788889999
Q ss_pred CCCCEE
Q 007857 228 FIHWTK 233 (587)
Q Consensus 228 l~~W~~ 233 (587)
|.+|+.
T Consensus 166 l~~~t~ 171 (310)
T d2b4wa1 166 IDELGA 171 (310)
T ss_dssp GGGCSH
T ss_pred hhhCCH
Confidence 999974
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.70 E-value=0.00016 Score=71.57 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=52.7
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC--------CCCccc
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ--------ETGMWE 248 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~--------~~~~wE 248 (587)
+||||. ..+.||.|+.. ++.|||+........| +.+++|+||.+|+..+..+.... ..+..-
T Consensus 3 ~NPv~~-------~~~aDP~vi~~--~~~yY~~~tt~~~~~g-i~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 72 (317)
T d1yrza2 3 QNPILP-------GFHPDPSIVRV--GDDYYIATSTFEWFPG-VRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIW 72 (317)
T ss_dssp ESCSBC-------SSCCSCEEEEE--TTEEEEEECCBTEESB-CEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEEC
T ss_pred cCCCCC-------CCCCCCEEEEE--CCEEEEEEccCCCCCC-eEEEECCCCCCCeECCccccCccccccCCCcccceee
Confidence 489982 24789997654 6889987543221123 67899999999999876443211 112233
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
.|+++..+ | +|+|.++.
T Consensus 73 AP~v~~~~--G-------------~~ylyy~~ 89 (317)
T d1yrza2 73 APCLSYHD--G-------------TFYLIYTD 89 (317)
T ss_dssp SCEEEEET--T-------------EEEEEEEE
T ss_pred cceEEEEC--C-------------EEEEEEEE
Confidence 69999987 6 78887764
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.52 E-value=0.0016 Score=63.99 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=54.4
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC--------CCCccc
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ--------ETGMWE 248 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~--------~~~~wE 248 (587)
.||||. .++-||.|+.. +|.|||+........ .+.+++|+||.+|++.+..+.... ..+..-
T Consensus 2 ~NPv~~-------~~~aDP~v~~~--~~~yY~~~tt~~~~~-gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 71 (321)
T d1y7ba2 2 KNPILR-------GFNPDPSICRA--DTDYYIATSTFEWFP-GVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIW 71 (321)
T ss_dssp ESCSBC-------SSCCSCEEEEE--TTEEEEEECCBTEES-BCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEEC
T ss_pred CCCcCC-------CCCCCCEEEEE--CCEEEEEEecCCCCC-CeEEEECCCccCCEEccccccCCcccccCCCcccCccc
Confidence 388883 24679997654 889999875432112 367899999999999875442211 123456
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
-|+++..+ | +|+|.++.
T Consensus 72 AP~v~~~~--g-------------~yylyys~ 88 (321)
T d1y7ba2 72 APDLSYHD--G-------------KFWLIYTD 88 (321)
T ss_dssp SCEEEEET--T-------------EEEEEEEE
T ss_pred CceEEEEC--C-------------EEEEEEEe
Confidence 79999987 6 88888775
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.51 E-value=0.00033 Score=68.64 Aligned_cols=154 Identities=10% Similarity=0.103 Sum_probs=82.9
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeC----CCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSY----DLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~----Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
+++++|+|||||.....+.... ..+.+.+.+. ...+|+..+..+......+.....++++++++||+.+++|.+.
T Consensus 69 v~~~~g~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~~~~ 147 (318)
T d1gyha_ 69 IYQHKGLFYLYYSVSAFGKNTS-AIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSF 147 (318)
T ss_dssp EEEETTEEEEEEEECCTTSCCE-EEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBS
T ss_pred EEEEcCceEEEEEEecCCCccc-ceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEeccCC
Confidence 7889999999999876543322 2334444332 2478998766544333222233457888888889999998754
Q ss_pred cCCCceeEEEEEec-CCCCC-ccceeeee--cCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-C----Ccce
Q 007857 149 DASGQQVQNLAMPE-NLSDP-LLKDWVKF--SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D----NEGM 219 (587)
Q Consensus 149 ~~~~~~~q~~A~s~-D~~d~-~l~~w~k~--~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~----~~G~ 219 (587)
.. .+.++... +.... ....+... ...+++..........+-.|.+ ++ .+|+|||++.+.. . ....
T Consensus 148 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~~~y~ 221 (318)
T d1gyha_ 148 WG----GLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGDSTYH 221 (318)
T ss_dssp TT----CEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGGCCCE
T ss_pred CC----CeeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCcccce
Confidence 32 12222221 11000 00112211 1122222222223344567884 45 5899999997643 1 1224
Q ss_pred EEEEEeCCCCC-CEE
Q 007857 220 AFVYWSWDFIH-WTK 233 (587)
Q Consensus 220 ~~ly~S~Dl~~-W~~ 233 (587)
+.+++|+++.. |+.
T Consensus 222 ~~~~~s~~~~Gp~~~ 236 (318)
T d1gyha_ 222 LVVGRSKQVTGPYLD 236 (318)
T ss_dssp EEEEEESSTTSCCBC
T ss_pred eeeecccCCCCCccc
Confidence 66778888763 543
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.30 E-value=0.00071 Score=66.35 Aligned_cols=142 Identities=14% Similarity=0.220 Sum_probs=82.3
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeC-----C-CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSY-----D-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~-----D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
+++++|+|||||..+..+. + ....+.+++. + ...|+..++.+.+... +......++++.+.||+.+++|.
T Consensus 87 v~~~~g~yyl~~t~~~~~~--~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~~~~ 162 (312)
T d1wl7a1 87 ICFYNGIYYLYYSVSTFGK--N-TSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWLSFG 162 (312)
T ss_dssp EEEETTEEEEEEEECCTTC--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEEC
T ss_pred EEEeCCEEEEEEEeecCCc--c-cceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEEeec
Confidence 8889999999999876543 2 4445555432 1 3567766544433322 22345678888888999999987
Q ss_pred eecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCcceE
Q 007857 147 GIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMA 220 (587)
Q Consensus 147 g~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~G~~ 220 (587)
+... ...++. +.|.. . ... ....+.....+.+..-+.-|++ ++ .+|+|||++++.. ....++
T Consensus 163 ~~~~----~i~~~~l~~d~~----~-~~~-~~~~i~~~~~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~~~~~~~~~~ 230 (312)
T d1wl7a1 163 SFWS----GIQLIQLDTETM----K-PAA-QAELLTIASRGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKI 230 (312)
T ss_dssp BSTT----CEEEEEBCTTTC----S-BCT-TCCCEEEECCSSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEE
T ss_pred CCCC----ceeEEEEcCcCC----c-CcC-CceEEEecccCCCCCcccccEE-EE-ECCcEEEEEecCCCcCCCCCCceE
Confidence 6431 223332 22321 1 111 1223333322233344567885 45 5899999997643 122357
Q ss_pred EEEEeCCCCC
Q 007857 221 FVYWSWDFIH 230 (587)
Q Consensus 221 ~ly~S~Dl~~ 230 (587)
.+++|+++..
T Consensus 231 ~~a~s~~~~G 240 (312)
T d1wl7a1 231 AVGRSKDITG 240 (312)
T ss_dssp EEEEESSTTC
T ss_pred EEEecCCCCc
Confidence 7889988763
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.55 E-value=0.016 Score=59.52 Aligned_cols=144 Identities=13% Similarity=0.177 Sum_probs=84.9
Q ss_pred ECCEEEEEEEECCCCCCCCCCce----EEEE-EeCCCcccE---eccCCCCCCCcc----------------CCCCeEee
Q 007857 76 YKGVYHLFYQYNPLGPLFGDKMI----WAHS-VSYDLINWI---HLSHALCPSGPY----------------DINSCWSG 131 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~~~~g~~~~----Wgha-~S~Dlv~W~---~~~~al~P~~~~----------------d~~Gv~SG 131 (587)
.||+++|||.-...... + ... -+++ .|.+.+.|+ ..++.+.|++.+ +....-.+
T Consensus 138 ~DG~~~LfYTg~~~~~~-~-~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP 215 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHY-G-KQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDP 215 (440)
T ss_dssp TTSCEEEEEEEEEGGGT-T-EEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEE
T ss_pred cCCeEEEEEEeccCCCC-C-cceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCC
Confidence 59999999986533211 1 122 2333 455556654 445667777532 12234578
Q ss_pred eEEEccCCeEEEEEeeecCC--C---------------------------------------ceeEEEEE-ecCCCCCcc
Q 007857 132 SVTILPGDKPFILYTGIDAS--G---------------------------------------QQVQNLAM-PENLSDPLL 169 (587)
Q Consensus 132 sav~~~dg~~~l~YTg~~~~--~---------------------------------------~~~q~~A~-s~D~~d~~l 169 (587)
.++. ++|+.||++.++... + ...++++. +.|.
T Consensus 216 ~v~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~----- 289 (440)
T d1oyga_ 216 HYVE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDY----- 289 (440)
T ss_dssp EEEE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTS-----
T ss_pred ceee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCc-----
Confidence 7776 589999999986531 0 01234554 3343
Q ss_pred ceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----C---Ccc-eEEEEEeCCCC-CCEE
Q 007857 170 KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----D---NEG-MAFVYWSWDFI-HWTK 233 (587)
Q Consensus 170 ~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~---~~G-~~~ly~S~Dl~-~W~~ 233 (587)
..|+.. .|++..... ...+.-|.|+ + .+|+|||+..++. + ..+ .+..|.|+.|. .|+-
T Consensus 290 ~~We~~--~pLl~a~~v--~d~~ErP~I~-~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 290 TLKKVM--KPLIASNTV--TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp SEEEEE--EEEEECTTT--CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred ccceec--CcceeccCC--CCeEECCEEE-E-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 789876 488865432 3456789865 4 4899999987653 1 112 24567787765 4653
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=92.24 E-value=0.41 Score=45.22 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=62.1
Q ss_pred eE-eeeEEEccCCeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecC
Q 007857 128 CW-SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP 202 (587)
Q Consensus 128 v~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~ 202 (587)
+| .++.+..+||.++++|.+... .....+.+..|+|+| ++|++. ..|...+.+.....+.+|.++....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeCC
Confidence 56 577777779999999987532 234556788999987 899752 2233333332345567888666655
Q ss_pred CCeEEEEEeeeeC---------------CcceEEEEEeCC-CCCCEEcc
Q 007857 203 DGRWRVLVGGQID---------------NEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 203 ~g~~~m~~g~~~~---------------~~G~~~ly~S~D-l~~W~~~~ 235 (587)
+|.-+++...... ..-.+.+++|+| ...|....
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 6664444332210 012356777755 68998754
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=87.87 E-value=0.11 Score=50.24 Aligned_cols=93 Identities=11% Similarity=0.011 Sum_probs=57.4
Q ss_pred CeEeeeEEEccCCeEEEEEeeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 127 SCWSGSVTILPGDKPFILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 127 Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
-||-.+|....+|+.+|+|---.+++.....++. +..++ .+|+..+ +|+. ..-||+|.+. +|+
T Consensus 28 DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~----~~f~~~~-~p~~---------glEDPrvt~i--~g~ 91 (310)
T d2b4wa1 28 DVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK----DEFTAVP-ELSW---------ELEDPYIAKI--NNE 91 (310)
T ss_dssp EEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET----TEEEECT-TCCB---------SCEEEEEEEE--TTE
T ss_pred ceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC----cceEECC-cccc---------cCCCCCEEeE--CCE
Confidence 3899998554589999999876554433334443 44433 5777653 5653 5569997765 688
Q ss_pred EEEEEeeeeCCcceEEEEEeCCCCCCEEcc
Q 007857 206 WRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235 (587)
Q Consensus 206 ~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~ 235 (587)
|+|-.-.-....+.+.+|++.+++.|+..+
T Consensus 92 lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l 121 (310)
T d2b4wa1 92 MIFGGTRVRKNGNAILSYYGYFYRGTPDEL 121 (310)
T ss_dssp EEEEEEEEC-----CCCEEEEEEEEETTEE
T ss_pred EEEEEEEecCCCCcceEEEeeeeecchhcC
Confidence 876543333333455688888888886443
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=85.77 E-value=14 Score=34.34 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=74.1
Q ss_pred eEEEEEeCCCcccEeccCCCCCCCcc-----CCCCeEeeeEEEccCCeEEEEEeeecCC-----CceeEEEEEecCCCCC
Q 007857 98 IWAHSVSYDLINWIHLSHALCPSGPY-----DINSCWSGSVTILPGDKPFILYTGIDAS-----GQQVQNLAMPENLSDP 167 (587)
Q Consensus 98 ~Wgha~S~Dlv~W~~~~~al~P~~~~-----d~~Gv~SGsav~~~dg~~~l~YTg~~~~-----~~~~q~~A~s~D~~d~ 167 (587)
.+....+.+..+|......-.+.... +..++--..++...+|.+++.+-..... ....+.+++|.|+|
T Consensus 169 ~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~l~~~~R~~~~~~~~~~~~~~~~~~~S~D~G-- 246 (364)
T d1w0pa3 169 VMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKDGG-- 246 (364)
T ss_dssp EEEEEESSSSSSCEECCCCCCCEEESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEEEESSSS--
T ss_pred eeEEEeccCCcEEEeccccCcccccccccccccCCCCcceEEEecCceeEEEEEccCCcccCCcCCCCeEEEEEcCCC--
Confidence 34445556678998764432222111 1112223344455678888877543321 12345689999987
Q ss_pred ccceeeeecCCcEEcCCCCCCCCCccCCe-EEeecCCCeEEEEEeeee----C--CcceEEEEEeCC-CCCCEEccccCc
Q 007857 168 LLKDWVKFSGNPVMTPPNGVKDDMFRDPT-TAWQAPDGRWRVLVGGQI----D--NEGMAFVYWSWD-FIHWTKLDHPLY 239 (587)
Q Consensus 168 ~l~~w~k~~~nPvi~~p~~~~~~~fRDP~-V~w~~~~g~~~m~~g~~~----~--~~G~~~ly~S~D-l~~W~~~~~~~~ 239 (587)
.+|+..........+. . ........ ......++.++|++.... . .+..+.++.|.| .++|+... .+.
T Consensus 247 --~tW~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~gR~~~~l~~S~D~G~TW~~~~-~l~ 321 (364)
T d1w0pa3 247 --ITWSLLEANNANVFSN-I-STGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPI-QLV 321 (364)
T ss_dssp --SSCEEEEEEEGGGSTT-C-CSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEE-ECC
T ss_pred --ccccccccCcccccCC-c-CCCcccceeEEeecCCCceEEEEeCCCCCccCCCceeeeEEEEEcCCCcCCCCCe-EEc
Confidence 8998742111111110 0 00111111 122335678888875532 1 122366777755 89998753 343
Q ss_pred cCCCCCccccCeEEEec
Q 007857 240 SVQETGMWECPDIFPVS 256 (587)
Q Consensus 240 ~~~~~~~wECPdlf~l~ 256 (587)
....+ =|++..++
T Consensus 322 ~g~~~----Ys~~~~~~ 334 (364)
T d1w0pa3 322 NGASA----YSDIYQLD 334 (364)
T ss_dssp SSBCC----SEEEEECS
T ss_pred CCCCC----CCceEEcC
Confidence 32222 38888876
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=85.33 E-value=3.7 Score=39.49 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=47.2
Q ss_pred eE-eeeEEEccCCeEEEEEeeecC---C-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecC
Q 007857 128 CW-SGSVTILPGDKPFILYTGIDA---S-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP 202 (587)
Q Consensus 128 v~-SGsav~~~dg~~~l~YTg~~~---~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~ 202 (587)
+| .++.+...+|.+++++.+... + ..-.+.++.|+|+| ++|++. ..|...+.......+.||..+....
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 677777779999999977432 1 22334567899987 899874 2333333222345677998666655
Q ss_pred CCeEEE
Q 007857 203 DGRWRV 208 (587)
Q Consensus 203 ~g~~~m 208 (587)
+|.-++
T Consensus 106 ~g~~~~ 111 (379)
T d3sila_ 106 QGRETI 111 (379)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 665443
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=82.21 E-value=8.3 Score=36.01 Aligned_cols=150 Identities=13% Similarity=-0.017 Sum_probs=77.0
Q ss_pred CCEEEEEEEECCCCCCCCC---CceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccC-CeEEEEEeeecCC
Q 007857 77 KGVYHLFYQYNPLGPLFGD---KMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG-DKPFILYTGIDAS 151 (587)
Q Consensus 77 ~G~YHlfyQ~~P~~~~~g~---~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d-g~~~l~YTg~~~~ 151 (587)
+|+..-|+...+.+...|. .+.....+|+| ..+|+............+......++++++.+ +.++++|+.....
T Consensus 19 ~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~~d~~~~~i~~~~~~~~~~ 98 (364)
T d1w0pa3 19 PGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTD 98 (364)
T ss_dssp TTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred CCEEEEEEeeeeCCCCCcccCCcceEEEEEeCCCCcCCCCCEEeecCCCCCCcccccCCeEEEECCCCeEEEEEEecCCC
Confidence 6778777766555443331 34467888999 79999743322222222333455666776554 5677777654321
Q ss_pred -----------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-Ccce
Q 007857 152 -----------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGM 219 (587)
Q Consensus 152 -----------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G~ 219 (587)
.........|.|.+ ++|.+. .++..+............+ ...+|++++.+..... ..+.
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~s~d~g----~tw~~~---~~~~~~~~~~~~~~~~~~~--~~~~G~~~~~~~~~~~~~~~~ 169 (364)
T d1w0pa3 99 AAQNGDRIKPWMPNGIFYSVYDVAS----GNWQAP---IVNPGPGHGITLTRQQNIS--GSQNGRLIYPAIVLDRFFLNV 169 (364)
T ss_dssp CCSGGGCCCTTSCCEEEEEEEETTT----TEECCC---EEECCSSCCEECCCCTTST--TCCTTCEEEEEEEESSSCEEE
T ss_pred CCcccccccccccCcEEEEecCCCC----Cccccc---ccccccceeeeecCCCccc--cccCCeEEEEEEeecCCCCce
Confidence 12233445677765 788652 1222221110111112221 1246777665543332 2233
Q ss_pred EEEEEeCCCCCCEEcc
Q 007857 220 AFVYWSWDFIHWTKLD 235 (587)
Q Consensus 220 ~~ly~S~Dl~~W~~~~ 235 (587)
..++..++...|+...
T Consensus 170 ~~~~s~d~g~tw~~~~ 185 (364)
T d1w0pa3 170 MSIYSDDGGSNWQTGS 185 (364)
T ss_dssp EEEEESSSSSSCEECC
T ss_pred eEEEeccCCcEEEecc
Confidence 4445556788998754
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=81.31 E-value=2.2 Score=42.13 Aligned_cols=83 Identities=13% Similarity=0.079 Sum_probs=45.9
Q ss_pred EEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
+..++|++++=..+....+...-.+.+|+|.| ++|+.- +++-. .....|.|. . .+|+-+|....
T Consensus 183 i~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G----~TW~~g--~~~~~-------~~~~~~~v~-~-~dG~lll~~R~- 246 (399)
T d2ah2a2 183 IVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFG--KGRSA-------FGCSEPVAL-E-WEGKLIINTRV- 246 (399)
T ss_dssp EECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEEC--SCCCC-------TTCEEEEEE-E-ETTEEEEEEEC-
T ss_pred eeecCccEecceEeecCCCceEEEEEEeCCCC----ceeEec--cccCC-------CCcccccee-c-cCCeEEEEEec-
Confidence 34568988753222222333344567899987 899863 22211 112345433 2 47876666533
Q ss_pred eCCcceEEEEEeCC-CCCCEEc
Q 007857 214 IDNEGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 214 ~~~~G~~~ly~S~D-l~~W~~~ 234 (587)
..|...+|+|.| ...|+..
T Consensus 247 --~~g~r~v~~S~DgG~TW~~~ 266 (399)
T d2ah2a2 247 --DYRRRLVYESSDMGNTWLEA 266 (399)
T ss_dssp --TTSCCCEEEESSTTSSCEEC
T ss_pred --CCCceeEEEEcCCCcccccc
Confidence 224444677766 7899865
|