Citrus Sinensis ID: 007858
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | 2.2.26 [Sep-21-2011] | |||||||
| Q02989 | 1411 | Alpha-latroinsectotoxin-L | N/A | no | 0.453 | 0.188 | 0.248 | 3e-07 | |
| P16157 | 1881 | Ankyrin-1 OS=Homo sapiens | yes | no | 0.204 | 0.063 | 0.307 | 8e-05 | |
| G5E8K5 | 1961 | Ankyrin-3 OS=Mus musculus | yes | no | 0.499 | 0.149 | 0.276 | 0.0001 | |
| Q12955 | 4377 | Ankyrin-3 OS=Homo sapiens | no | no | 0.500 | 0.067 | 0.28 | 0.0002 | |
| Q9FY48 | 1625 | E3 ubiquitin-protein liga | no | no | 0.485 | 0.175 | 0.200 | 0.0004 |
| >sp|Q02989|LITA_LATTR Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 20/286 (6%)
Query: 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML-QRNP 138
T LH+AT + K L G L+ D NG T +AA G++E+ F+L Q+
Sbjct: 637 TPLHLATLQNNLSVSKL---LAGKGAYLNDGDANGMTPLHYAAMTGNLEMVDFLLNQQYI 693
Query: 139 NLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDN--LEPDDLENTFFVSIETGLYGLA 196
N+ + TPL++A LF ++ +A L N LE + N ++ TG L
Sbjct: 694 NINAATKEKKWTPLHLAILFKKNDVAERLLSDENLNIRLETNGGINPLHLASATGNKQLV 753
Query: 197 LQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQAL 256
++LL KN + + + ++ +N P +L G + + T+S L
Sbjct: 754 IELLAKNADVTRLTSKGFSALHLGIIGKNEE-----IPFFLVEKGAN-VNDKTNSGVTPL 807
Query: 257 ELVKCLWK----EISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLD 312
L K + S D+ + +A +G+ + + +L P L++ +
Sbjct: 808 HFAAGLGKANIFRLLLSRGADIKAEDINSQMPIHEAVSNGHLEIVRILIEKDPSLMNVKN 867
Query: 313 ENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHL 358
F++AV R+ D I++ K+ VD +GN LLHL
Sbjct: 868 IRNEYPFYLAVEKRYKD----IFDYFVSKDANVNEVDHNGNTLLHL 909
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Insecticidal presynaptic neurotoxin that induces neurotransmitter exocytosis. Binds to neurexin-1-alpha (NRXN1), latrophilin-1 (LPHN1), and receptor-type tyrosine-protein phosphatase S (PTPRS), and induces neurotransmitter exocytosis through two calcium-dependent mechanisms (membrane pore formation and signaling via latrophilin) and a yet to be defined calcium-independent mechanism (By similarity). The toxin forms channels with 0.55-0.58 nm entrance diameter and a relatively small conductance in planar phospholipid membranes. Latrodectus tredecimguttatus (taxid: 6925) |
| >sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
PL+ AA G AK +L + + +A K QT LH A TN VK ++E +
Sbjct: 440 PLHMAARAGHTEVAKYLLQNKAKVNAKA---KDDQTPLHCAARIGHTNMVKLLLENNANP 496
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMA 164
NL + G+T AA G VE +L++ + + G TPL++AA +G+ ++A
Sbjct: 497 NLATTA---GHTPLHIAAREGHVETVLALLEKEASQACMTKKG-FTPLHVAAKYGKVRVA 552
Query: 165 SFLYRQN 171
L ++
Sbjct: 553 ELLLERD 559
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Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils. Homo sapiens (taxid: 9606) |
| >sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 137/326 (42%), Gaps = 33/326 (10%)
Query: 46 LYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDN 105
L+ AA G AK +L D ++ A G+ T LH+A + N ++ M L H
Sbjct: 354 LHVAAHCGHYKVAKVLL--DKKASPNAKALNGF-TPLHIAC---KKNRIRVMELLLKHGA 407
Query: 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKM 163
+ E+G T AA +G V I ++ +PN +RG T L++AA GQ+++
Sbjct: 408 SIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRG---ETALHMAARSGQAEV 464
Query: 164 ASFLYRQNED-NLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHML 222
+L + + D + +S G + QLL++ A AT + Y T +H+
Sbjct: 465 VRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNA-ATTSGY-TPLHLA 522
Query: 223 AR----NPSAFTSNCPGWLKVPGIK-FITNNTDSSTQALELVKCLWKEISKSTHKDVLKL 277
AR + +AF + L + K F + + LE+ L + KS D
Sbjct: 523 AREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLL---LQKSASPDA--- 576
Query: 278 ISKPSKL--LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIY 335
+ S L L AAH N K +A+L H +NG + HIA D +
Sbjct: 577 -AGKSGLTPLHVAAHYDNQK-VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLL 634
Query: 336 EMGFDKELIATYVDVSGNNLLHLAAQ 361
E G D A V G +HLAAQ
Sbjct: 635 EYGAD----ANAVTRQGIASVHLAAQ 656
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Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1. Mus musculus (taxid: 10090) |
| >sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 136/325 (41%), Gaps = 31/325 (9%)
Query: 46 LYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDN 105
L+ AA G AK +L D ++ A G+ T LH+A + N +K M L H
Sbjct: 371 LHVAAHCGHYKVAKVLL--DKKANPNAKALNGF-TPLHIAC---KKNRIKVMELLLKHGA 424
Query: 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKM 163
+ E+G T AA +G V I ++ +PN +RG T L++AA GQ+++
Sbjct: 425 SIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRG---ETALHMAARSGQAEV 481
Query: 164 ASFLYRQNED-NLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHML 222
+L + + D + +S G + QLL++ A AT + Y T +H+
Sbjct: 482 VRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNA-ATTSGY-TPLHLS 539
Query: 223 AR----NPSAFTSNCPGWLKVPGIK-FITNNTDSSTQALELVKCLWKEISKSTHKDVL-K 276
AR + +AF + L + K F + + LE+ L + KS D K
Sbjct: 540 AREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLL---LQKSASPDAAGK 596
Query: 277 LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336
P L AAH N K +A+L H +NG + HIA D + E
Sbjct: 597 SGLTP---LHVAAHYDNQK-VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLE 652
Query: 337 MGFDKELIATYVDVSGNNLLHLAAQ 361
G D A V G +HLAAQ
Sbjct: 653 YGAD----ANAVTRQGIASVHLAAQ 673
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Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments. Homo sapiens (taxid: 9606) |
| >sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 128/324 (39%), Gaps = 39/324 (12%)
Query: 46 LYKAALKGDCNEAKRILGDDH--------QSMLRAAVTKGYQTILHVATGAKQTNFVKQM 97
L++ L+GD + IL +S+L A G Q+ LH+A V+ +
Sbjct: 472 LHRVVLEGDFEGVRNILAKAAAGGGGSSVRSLLEAQNADG-QSALHLACRRGSAELVEAI 530
Query: 98 VELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLT-IRGGGQMTPLYIAA 156
+E G N+ + D++G+ FA A GS + ++++ N+ + +R G + ++ +
Sbjct: 531 LEY-GEANV-DIVDKDGDPPLVFALAAGSPQCVHVLIKKGANVRSRLREGSGPSVAHVCS 588
Query: 157 LFGQSK-MASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKY 215
GQ M L + N D+ E ++ A+ +L+ ++AK
Sbjct: 589 YHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAIVILENGGSRSMTVSNAKC 648
Query: 216 GTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL 275
T +HM + W++V + I+ + + + C+ I K K+
Sbjct: 649 LTPLHMCVATWNVAVIK--RWVEVSSPEEISQAINIPS-PVGTALCMAASIRKDHEKEGR 705
Query: 276 KLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIY 335
+L+ +L + D Q ++GR+ H A M + + ++I
Sbjct: 706 ELVQ-------------------ILLAAGADPTAQDAQHGRTALHTAAMANNVELVRVIL 746
Query: 336 EMGFDKELIATYVDVSGNNLLHLA 359
+ G + A +V LH+A
Sbjct: 747 DAGVN----ANIRNVHNTIPLHMA 766
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Mediates E2-dependent protein ubiquitination. Acts as a negative regulator of abscisic acid signaling. Required for ABI5 degradation. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | ||||||
| 356498501 | 567 | PREDICTED: uncharacterized protein LOC10 | 0.914 | 0.947 | 0.453 | 1e-125 | |
| 356558266 | 584 | PREDICTED: uncharacterized protein LOC10 | 0.938 | 0.943 | 0.433 | 1e-125 | |
| 356532642 | 590 | PREDICTED: ankyrin repeat-containing pro | 0.947 | 0.942 | 0.430 | 1e-123 | |
| 147860696 | 891 | hypothetical protein VITISV_011174 [Viti | 0.957 | 0.630 | 0.413 | 1e-118 | |
| 359473665 | 602 | PREDICTED: LOW QUALITY PROTEIN: ankyrin | 0.981 | 0.956 | 0.415 | 1e-116 | |
| 359483665 | 762 | PREDICTED: ankyrin repeat-containing pro | 0.914 | 0.704 | 0.429 | 1e-116 | |
| 356532646 | 606 | PREDICTED: uncharacterized protein LOC10 | 0.911 | 0.882 | 0.422 | 1e-113 | |
| 359472754 | 789 | PREDICTED: ankyrin repeat-containing pro | 0.926 | 0.689 | 0.428 | 1e-113 | |
| 356532632 | 638 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.876 | 0.411 | 1e-111 | |
| 147784800 | 1697 | hypothetical protein VITISV_029434 [Viti | 0.911 | 0.315 | 0.404 | 1e-108 |
| >gi|356498501|ref|XP_003518089.1| PREDICTED: uncharacterized protein LOC100784675 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/565 (45%), Positives = 361/565 (63%), Gaps = 28/565 (4%)
Query: 23 RDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKG-YQTI 81
R P + Q DK +Y +CVPL+KA+LKGD EA+++L D S+L+ A+TKG + T+
Sbjct: 23 RKPLLHLVSTQEDKGRYLTQCVPLHKASLKGDWKEARKLLDQD-GSLLKTAITKGGWATL 81
Query: 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLL 141
LH+A GA + +FV+++++L + L LQD GNTAFCFAAAVG+V+IA+ M + N +L
Sbjct: 82 LHIAVGANRVHFVEELLKLMQPEEL-ELQDHKGNTAFCFAAAVGNVQIAEMMERINASLP 140
Query: 142 TIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLK 201
TIRGGG +TPL++A L G+ +MA L+ + ++ E D F I++GLY LAL++L
Sbjct: 141 TIRGGGGLTPLHLAVLQGRKEMAWHLFPKTKEIFEEVDWTILFINCIKSGLYDLALEMLN 200
Query: 202 KNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKC 261
+ K +LA A + T +H+LAR P T L+LVK
Sbjct: 201 E-KDMLAYARGEENQTGLHVLARTPG----------------------KKDTPILKLVKK 237
Query: 262 LWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHI 321
+W + + +++ IS+PS+++F AA GNF+FL+V+ +YPDL+ +LD GRSI HI
Sbjct: 238 MWDIVLSLDDQTMMETISEPSQVIFIAAEVGNFEFLSVVLSTYPDLIWELDSTGRSIIHI 297
Query: 322 AVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQE 381
AV+HRHA F LI+E+G KE+I T+ D NNLLH AA+ + P ++ V GAAL+M E
Sbjct: 298 AVLHRHASIFNLIHEIGPMKEVILTFNDDQENNLLHYAARQAPPDRLNAVSGAALQMMLE 357
Query: 382 LKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLAT 441
L F+EV+ I+ PS E +N++G P +LFT EH+ LLE+ E WMK A+SC +V+TL T
Sbjct: 358 LSWFEEVKKIMLPSSIEKRNSNGIIPRQLFTMEHEELLEKGESWMKRTAKSCMVVSTLIT 417
Query: 442 AGVFQAAFTPPGGNKDG-EGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRY 500
GVF AAF+ PGGN D EG+PN+ K F IF +S++IA S S+L+FLSILI SRY
Sbjct: 418 TGVFTAAFSVPGGNNDDKEGSPNYLGKPTFLIFALSDSIAMISSSASILIFLSILI-SRY 476
Query: 501 RENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILVFLPVAL 560
E DFLK LP KL LL LFI++ +MM++FSS+FF+ Y N + L F+P+ +
Sbjct: 477 AEEDFLKSLPLKLISALLALFISIISMMVAFSSAFFITYYYGSNGVPIFISALAFIPIPV 536
Query: 561 YLLLQCRLQGDILYSTCRSRFLVGP 585
++ LQ RL DILY FL P
Sbjct: 537 FIFLQFRLWSDILYLAYMCSFLFRP 561
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558266|ref|XP_003547428.1| PREDICTED: uncharacterized protein LOC100814409 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/563 (43%), Positives = 354/563 (62%), Gaps = 12/563 (2%)
Query: 23 RDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTIL 82
R P + Q + +Y +CVPL+KAALKGD EAK+IL D ++L++A+TKG+ T+L
Sbjct: 22 RRPLLHLVSTQEARHRYLTQCVPLHKAALKGDWKEAKKILDQD-PTLLKSAITKGWATVL 80
Query: 83 HVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLT 142
H+A GA FV+++V+L ++L L D+ GNTAFCFAAAVG+V IA+ M +N +L T
Sbjct: 81 HIAVGANHECFVEELVKLLSREDL-ELLDDKGNTAFCFAAAVGNVHIAEIMRIKNESLPT 139
Query: 143 IRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKK 202
IRGG +TPL++A L G+S+M +L+ + + L DD F + + +GLY LAL++L +
Sbjct: 140 IRGGEGVTPLHLAVLQGRSEMTRYLFDKTREILYDDDWITLFLICVNSGLYELALEMLNQ 199
Query: 203 NKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPG--IKFITNNTDSSTQALELVK 260
+ L A A Y TA+H+LAR P C L+ P + N D L+L +
Sbjct: 200 RESL-AFARGDNYETALHVLARKP--LNCGCRSPLRYPKHLLHLCKNMKDPPV--LKLTR 254
Query: 261 CLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFH 320
+W +++ I +PS++ F AA GNF+FL+V+ +YPDL+ +L+ GRSI H
Sbjct: 255 RIWDIFLTLDDSEMMDAIREPSQVTFIAAEEGNFEFLSVIMSTYPDLIWELNTMGRSIIH 314
Query: 321 IAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQ 380
+A +HRHA F LI+E+G K+ + T++D G+ LLH A + ++ V GAA +M
Sbjct: 315 VAALHRHASIFNLIHEIGPSKDFVLTFLDDEGSTLLHSVAVIAPTDRLNVVSGAAFQMML 374
Query: 381 ELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLA 440
EL F+EV+ I+ PSF EM N +G P ELFT++H+ LL++ E WMK A SC +V+TL
Sbjct: 375 ELTWFEEVKKIMLPSFVEMPNYEGIIPRELFTNQHEDLLKKGESWMKRTASSCMVVSTLI 434
Query: 441 TAGVFQAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRY 500
GVF AAF+ PGG D G+PN+ K F +F +S+A+A + S S L+FLSILI SRY
Sbjct: 435 ATGVFSAAFSVPGGIDDKLGSPNYLKKPLFTVFALSDALALTLSTTSTLIFLSILI-SRY 493
Query: 501 RENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILVFLPVAL 560
E DFL+ LPFKL FGL++LF ++ +MM++FSS+FF+AY + + V P+ L
Sbjct: 494 AEEDFLRSLPFKLIFGLVSLFFSIISMMVAFSSTFFIAYYHAKTWVPITIAVFVCFPIFL 553
Query: 561 YLLLQCRLQGDILY--STCRSRF 581
++ LQ RL DI+Y C S F
Sbjct: 554 FICLQFRLWHDIMYLHYICGSLF 576
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532642|ref|XP_003534880.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/567 (43%), Positives = 358/567 (63%), Gaps = 11/567 (1%)
Query: 23 RDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTIL 82
R P + Q + +Y +CVPL+KAAL+GD EAK+IL D ++L +A+TKG+ T+L
Sbjct: 27 RRPLLHLVSTQESRHRYLTQCVPLHKAALEGDWKEAKKILDQD-PALLNSAITKGWATVL 85
Query: 83 HVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLT 142
H+A GA +FV+++++L ++L LQD GNTAFCFAAAVG+V IA+ M ++N +L
Sbjct: 86 HIAVGANHESFVEELLKLMSREDL-ELQDIKGNTAFCFAAAVGNVHIAERMRRKNASLPM 144
Query: 143 IRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKK 202
IRGG +TPL++A L G+S+MA +L+ + + L DD F + + + LY LAL++L +
Sbjct: 145 IRGGEGVTPLHLAVLQGRSEMAWYLFDKTRETLYDDDWFQVFLICVNSRLYELALEMLNQ 204
Query: 203 NKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPG--IKFITNNTDSSTQALELVK 260
K+ LA A TA+H+LAR P C L+ P + N D L+L +
Sbjct: 205 -KESLAFARGDNDETALHVLARKP--LDCGCRSPLRYPKHVLHLCKNMKDPPV--LKLTR 259
Query: 261 CLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFH 320
+W ++ I +PS++ F AA GNF+FL+V+ +YPDL+ +L+ G+SI H
Sbjct: 260 RVWDIFLTLDDSKMMTAIREPSQVTFIAAEVGNFEFLSVIMSTYPDLIWELNTMGQSIIH 319
Query: 321 IAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQ 380
+A +HRHA F LI+E+G K+L+ T+ D G+ LLH A+ + ++ V GAAL+M
Sbjct: 320 VAALHRHASIFNLIHEIGPSKDLLLTFWDDEGSTLLHSVAEIAPTDRLNVVSGAALQMML 379
Query: 381 ELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLA 440
EL F+EV+ ++PS+ E N++G P ELFT++HK LL++ E WMK A SC +V+TL
Sbjct: 380 ELTWFEEVKKNMQPSYIERPNHEGIVPRELFTEKHKELLKKGESWMKRTASSCMVVSTLI 439
Query: 441 TAGVFQAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRY 500
GVF AAF+ PGG KD G+PN+ K F +F +S+A+A + S S L+FLSILI SRY
Sbjct: 440 ATGVFSAAFSVPGGTKDDSGSPNYLKKHLFTVFAISDALALTLSTASTLIFLSILI-SRY 498
Query: 501 RENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTI-ILVFLPVA 559
E DFL+ LPFKL FGL++LF+++ +MM +FSS+FF+ Y +TI + V P+
Sbjct: 499 AEEDFLRSLPFKLIFGLVSLFLSIVSMMGAFSSAFFITYYHAKTWVVPITIAVFVLFPIL 558
Query: 560 LYLLLQCRLQGDILYSTCRSRFLVGPK 586
L++ LQ RL DI+YS L PK
Sbjct: 559 LFIYLQFRLWHDIVYSHYMCGSLFRPK 585
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147860696|emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/595 (41%), Positives = 349/595 (58%), Gaps = 33/595 (5%)
Query: 15 EISISITGRDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAV 74
EI I + ++ S+ PL D+ Y + C+PLY+AALKGD AK I + H + +R +
Sbjct: 301 EIEILTSPQNMTPSLDPLSGDRAFYLNVCIPLYQAALKGDWETAKGIF-EIHPTAVRVRI 359
Query: 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML 134
T+ T+LH+A AK+T+FV+++V L N L LQ+EN NTAFCFAAA G+V IA+ M+
Sbjct: 360 TRNLDTVLHIAAAAKRTHFVEEVVGLMD-PNDLELQNENSNTAFCFAAAAGTVRIAEVMV 418
Query: 135 QRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY-RQNEDNLEPDDLENTFFVSIETGLY 193
++N +L IRG QM PL++AAL G S+M +LY + N +L+ +D I T LY
Sbjct: 419 KKNDHLPMIRGNQQMMPLHMAALLGHSEMVWYLYNKTNHQDLKDEDWIGILNTCISTDLY 478
Query: 194 GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFT--SNCPGW--------------- 236
+AL +L+ + KL A Y TA+H+LAR PSAF+ S W
Sbjct: 479 EVALAILESHPKL-ATIRDGNYETALHLLARKPSAFSGESRIGIWTTFINPRSPLQVSTV 537
Query: 237 -----LKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHS 291
+ +P F+ N+ S + L + + LI P +L+F AA
Sbjct: 538 VIIFLMVIPSNNFLFNSQFQS-KPLNSSNAFGSRLYNYLDSKIADLIRDPYRLVFVAAKL 596
Query: 292 GNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVS 351
GN FL L SYPDL+ ++ RSIFHIA +HR F LIYE+G K++I TY D +
Sbjct: 597 GNTIFLTELLHSYPDLIWRVXSQTRSIFHIAALHRQDRIFNLIYEIGSIKDMIMTYRDEN 656
Query: 352 GNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELF 411
GNN+LHL + ++P ++ + GAAL+MQ+EL FKEVE +++P+++E KN GKTPW LF
Sbjct: 657 GNNMLHLVGKLAHPSELNIISGAALQMQRELLWFKEVEKLMQPTYREKKNRQGKTPWVLF 716
Query: 412 TDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDGEGTPNFHSKIWFH 471
T+EH+ L+++ EKWM+ A +VATL VF AAFT PGG+ TP I
Sbjct: 717 TEEHRDLMKDGEKWMRETAAQSMLVATLIATVVFSAAFTVPGGHSQQTDTP-----ILLM 771
Query: 472 IFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLSF 531
+F +S+ +A S S+LMFLSIL TSRY E DFL LP +L FGL LF+++ TMM++F
Sbjct: 772 VFAVSDGLALFTSSTSILMFLSIL-TSRYAEQDFLHSLPSRLMFGLTALFVSIITMMVTF 830
Query: 532 SSSFFLAYRDRMNCFSMLTIILVFLPVALYLLLQCRLQGDILYSTCRSRFLVGPK 586
+ +FF+ Y +L + PV+L+ LQ L D++ ST SRFL P+
Sbjct: 831 TITFFIVYHHGFAWVPILIALFATGPVSLFASLQYPLLADVINSTYGSRFLFEPR 885
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473665|ref|XP_003631341.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/599 (41%), Positives = 355/599 (59%), Gaps = 23/599 (3%)
Query: 2 ERRRTNVAPASQQEISISITGRDPA--NSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAK 59
E R +++ +Q I TG P + V + D+ Y C+PLY+AA+KGD AK
Sbjct: 8 EELRIDISSLAQDGHEIE-TGTSPEQMSPVDLISGDRDLYLAVCIPLYRAAMKGDWKTAK 66
Query: 60 RILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119
I + + +R +T G T LH+A AK FV++MV++ ++L L+++ NTAF
Sbjct: 67 GIF-EMFPAAVRFTITPGGDTTLHIAAAAKHVYFVEEMVKIMEPEDL-ELKNQYSNTAFW 124
Query: 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY-RQNEDNLEPD 178
FAAA G V IA+ M+++N L IR +MTPL++AAL G S+M +LY + + + L
Sbjct: 125 FAAAAGIVGIAKAMVKKNEILPMIRAYDEMTPLHVAALLGHSEMVWYLYNKTDHEQLTVS 184
Query: 179 DLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTS------- 231
D I T LY +AL + + LA TA+H+LAR PSAF+
Sbjct: 185 DWVKLLNACISTDLYDVALDV-SSHHPTLAVERDGNGETALHLLARKPSAFSGGDQLHIW 243
Query: 232 ----NCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFD 287
N +V K + N ++L+LVK LW+++ H ++L LI PS LL
Sbjct: 244 NTVINSISCKRVEDKKILRQN-----KSLKLVKHLWQQVIVQPHSEILDLIRSPSPLLLV 298
Query: 288 AAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATY 347
AA GN FL L YPDL+ ++D++ RSIFHIAV+HR + F LIYE+G K+LI
Sbjct: 299 AAELGNTVFLTELIAIYPDLIWEVDDHNRSIFHIAVLHRQENIFNLIYEIGSMKDLIVPN 358
Query: 348 VDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTP 407
D + NN+LHLA + + P+ + V GAAL+MQ+EL F+EVE +V PSF+E KN DG+TP
Sbjct: 359 KDENDNNILHLAGRLAPPRQRNIVVGAALQMQRELLWFREVEKMVLPSFRERKNRDGETP 418
Query: 408 WELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDGEGTPNFHSK 467
W+LFT EHK L++E EKWM+ A +VATL VF AA T PGG+ G P F K
Sbjct: 419 WDLFTKEHKDLMKEGEKWMRGTAAQSMLVATLIATVVFAAALTVPGGSNQDTGIPXFVEK 478
Query: 468 IWFHIFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATM 527
HIF +S+AIA S S+L+FLSI++TSRY ++DFL+ LP +L FGL TLFI++ +M
Sbjct: 479 EILHIFAVSDAIALFTSLTSILVFLSIVLTSRYADDDFLELLPSRLMFGLFTLFISIISM 538
Query: 528 MLSFSSSFFLAYRDRMNCFSMLTIILVFLPVALYLLLQCRLQGDILYSTCRSRFLVGPK 586
M++F+++FFL + + +L + FL V LY +QCRL I+ +T SR + P+
Sbjct: 539 MVTFTATFFLLFSHGVTWAPILVAVFAFLLVTLYFSMQCRLWAHIIRATYCSRLIFRPR 597
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483665|ref|XP_003632996.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/554 (42%), Positives = 341/554 (61%), Gaps = 17/554 (3%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
PLY AAL GD + A+RI DHQ++ RA +T+ +T LH+A GA+ FV+ +V +
Sbjct: 207 PLYLAALSGDWDVAERIFESDHQAV-RARITRAQETPLHIAAGARHLTFVENLVRMMTPA 265
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMA 164
+L +L+++ GNTA CFAA G +IA+ M+ +N L IRG TPL++A L G +M
Sbjct: 266 DL-ALRNKVGNTALCFAAVSGVTKIAEVMVNKNNRLPLIRGSEGATPLHMATLLGHREMV 324
Query: 165 SFLYRQNEDN-------LEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGT 217
+LY + + N L +D +I + L+ +AL++++K+ K+ A A T
Sbjct: 325 WYLYNKTDSNRLTDSNRLTDEDHHGLLIAAITSDLFDVALKIVQKHPKI-ATARGRNGET 383
Query: 218 AMHMLARNPSAFTSNCP-GWLK-----VPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271
A+H+LAR PSA+ S G+L+ P IK + + QALELVKCLW E+
Sbjct: 384 ALHILARKPSAYQSGSQLGFLQRCIYAFPFIKVVYDQKLMHIQALELVKCLWSEVLLMNE 443
Query: 272 KDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTF 331
V +LI PS+LLF AA G +FL L +YPDL+ ++D RSIFHIAV+HR F
Sbjct: 444 LQVGELIRTPSRLLFTAAELGIVEFLIELIHAYPDLIWKVDTQSRSIFHIAVVHRQEKVF 503
Query: 332 KLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETI 391
LI+E+G K+LIA+Y D + NN+LHLA + + + GAAL++++EL FKEVE I
Sbjct: 504 NLIHEIGALKDLIASYRDENNNNMLHLAGKLAPSDRLKTDSGAALQLRRELHWFKEVEKI 563
Query: 392 VKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQAAFTP 451
V+P ++E++N++GKTP LF +EHK L+ E EKWMK A SC +VATL +F A FT
Sbjct: 564 VQPLYREIRNSEGKTPQTLFMEEHKVLVREGEKWMKDTAASCMLVATLIATVMFAAFFTV 623
Query: 452 PGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPF 511
PGG+ G P F + F +F +S+A++F S S+LMFLSIL TSRY E DFL LP
Sbjct: 624 PGGDNGNTGIPIFLKRRSFTVFAVSDALSFVSSAASILMFLSIL-TSRYAEEDFLHSLPN 682
Query: 512 KLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILVFLPVALYLLLQCRLQGD 571
+LT GL TLFI++ATMM++F ++ FL ++ + ++ +PV+L+ LLQ L D
Sbjct: 683 RLTIGLGTLFISVATMMIAFCATLFLVLGHGLHQAKIPIALVACIPVSLFALLQFPLFAD 742
Query: 572 ILYSTCRSRFLVGP 585
++ T SR GP
Sbjct: 743 MVSCTYGSRMFFGP 756
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532646|ref|XP_003534882.1| PREDICTED: uncharacterized protein LOC100813731 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/545 (42%), Positives = 336/545 (61%), Gaps = 10/545 (1%)
Query: 18 ISITGRDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKG 77
+ + P + + + +K++Y KC+PLYK AL+GD N A+R++ D S+L AA+TK
Sbjct: 46 VQMASPQPRHPSRHILENKREYLEKCIPLYKLALRGDWNAARRMIDAD-TSLLNAAITKE 104
Query: 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRN 137
+ T+LHV G Q +FV +V+L D+L L++ NGNTAFC+AAA G+++IA M+++N
Sbjct: 105 WGTLLHVVAGTDQVHFVDLLVKLLNPDDL-ELKNFNGNTAFCYAAASGNLQIASLMIKKN 163
Query: 138 PNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLAL 197
L IRGG TP Y+AAL G+ MA LY LE D+ FF+ I+ GLY +AL
Sbjct: 164 AGLPKIRGGEGATPFYMAALQGKDDMARHLYDLTTGILEEDEWTTLFFLCIKNGLYDIAL 223
Query: 198 QLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALE 257
++L+++ +LA TA+H+LAR PS FT + G P I NN+ T ++
Sbjct: 224 KMLQEHS-MLALERDENNDTALHLLARMPSGFTGH--GQWYPPSQ--ILNNSMKPTPFVQ 278
Query: 258 LVKCLWKEISKSTHKD--VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG 315
LV+CLW ++ + + + + IS PS++ FDA GNF+F+A L RSYPDL+ ++D+
Sbjct: 279 LVECLWNKLLEQDYDETEMRTFISVPSQITFDATQVGNFQFVAALMRSYPDLLWEVDDKN 338
Query: 316 RSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAA 375
RSI HIAV+HRH+ + LI+E+G K+ IAT+ D GNN+LH AA+ + P + + GAA
Sbjct: 339 RSIIHIAVIHRHSSIYSLIHELGSFKDFIATFEDDEGNNILHYAAKLTPPDKLGLISGAA 398
Query: 376 LEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSI 435
L+M EL FKEV+ ++ E KN GKTP E+F +EHK LL +AE W KS + SC +
Sbjct: 399 LQMTHELLWFKEVKELMLLLDVEKKNAKGKTPREIFAEEHKELLTKAESWTKSTSISCML 458
Query: 436 VATLATAGVFQAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSIL 495
V+TL TAGVF A F PGG TPNF K F F +S A A + S+LMFLSIL
Sbjct: 459 VSTLITAGVFTATFMLPGGIHKKTQTPNFLHKPAFLAFSLSVAFALISASASILMFLSIL 518
Query: 496 ITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILVF 555
I+S Y E + K LP +L G++ I++ MM++FS++F ++Y + ++
Sbjct: 519 ISS-YAEEECFKLLPKRLLIGMVAQIISITNMMVAFSAAFCMSYSHGSKWVQIFIFVISI 577
Query: 556 LPVAL 560
+P+ L
Sbjct: 578 VPLFL 582
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/560 (42%), Positives = 335/560 (59%), Gaps = 16/560 (2%)
Query: 34 NDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNF 93
N K Y C+ AAL GD AK L + Q+ +RA +T+ +T LH+A GA+ T F
Sbjct: 170 NGLKAYVLLCL----AALNGDWKSAKAFLESNPQA-VRARITRRSETALHIAAGARHTRF 224
Query: 94 VKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153
V+++V+L D+L +LQ++ GNTA CFAAA G IA+ M+ +N L IRG +TPLY
Sbjct: 225 VEELVKLMKPDDL-ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLY 283
Query: 154 IAALFGQSKMASFLYR-QNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATH 212
+AAL G M +LY EDNL +D +I L+ +AL +L ++ +L A A
Sbjct: 284 MAALVGHKDMVRYLYSVTEEDNLTKEDRIGLLVAAITANLFDVALHMLHEDPEL-AMARD 342
Query: 213 AKYGTAMHMLARNPSAFTSNCP--GWLKV----PGIKFITNNTDSSTQALELVKCLWKEI 266
TA+H+LAR P AF S W + PG K + + QALELV+ LW +I
Sbjct: 343 GNGDTALHVLARKPLAFYSGSQLGIWHRCIYSFPGFKSVYDKKLMHIQALELVQQLWDKI 402
Query: 267 SKSTHK-DVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325
H + +LI PS+LLF AA G +F+ VL RSYPDL+ ++++ ++IFH+AV H
Sbjct: 403 LSLDHDPKIGELIRTPSRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAH 462
Query: 326 RHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTF 385
R F LIYE+G K+ IA Y D NN+LHLA + + + GAA ++Q+EL F
Sbjct: 463 RQEKIFNLIYEIGAHKDYIAAYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWF 522
Query: 386 KEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVF 445
KEVE I++PS+ EMKN G+TP LFT+EHK L+ E EKWMK A SC +VATL +F
Sbjct: 523 KEVEKIIQPSYTEMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMF 582
Query: 446 QAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRYRENDF 505
AAF+ PGGN D G P F +K F +F +S+A+A S S+L+FLSIL TSRY E DF
Sbjct: 583 AAAFSVPGGNDDDTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSIL-TSRYAEEDF 641
Query: 506 LKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILVFLPVALYLLLQ 565
L+ LP +L GL TLFI++ATMM++F ++ F+ + + ++ +PV L+ LL+
Sbjct: 642 LESLPNRLIIGLATLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLK 701
Query: 566 CRLQGDILYSTCRSRFLVGP 585
L D++ RS + P
Sbjct: 702 FPLFIDMISHRYRSSIIFRP 721
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532632|ref|XP_003534875.1| PREDICTED: uncharacterized protein LOC100808896 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/574 (41%), Positives = 340/574 (59%), Gaps = 15/574 (2%)
Query: 23 RDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTIL 82
R + +Q ++ + + +CVPLYK AL G+ AK IL D + ++ AA+ G+ T+L
Sbjct: 58 RPSLDFLQDTKDAMEVFFSQCVPLYKHALDGNWQAAKHIL-DANPALKTAAIAPGWPTVL 116
Query: 83 HVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLT 142
HVA G +FV++++ + +D + LQD+ GNTAFCF AA G+ IA+ ML+RN L T
Sbjct: 117 HVAAGTNHYHFVEELLNILDNDAI-QLQDKKGNTAFCFVAAAGNWRIAELMLKRNILLPT 175
Query: 143 IRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKK 202
++GG MTPL+ AAL G+ MA LY ++ + +D E FF I+T Y LAL++++
Sbjct: 176 VKGGDGMTPLHFAALQGRCPMACKLYPMTKEMFDDEDWELLFFTCIKTCNYHLALKMVRD 235
Query: 203 NKKLL-----AGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALE 257
K+L K G A+H+LA+N S C +K N L+
Sbjct: 236 RKELAFARDGNNGEEKKGGIALHLLAQNQKPLDSCCHCHQHQIPVKI--NPGMKQHVFLQ 293
Query: 258 LVKCLWKEISKS--THKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG 315
LV LW + ++ + +L +IS+PS LLFDAA GNF FL+ L +YP L+ ++D
Sbjct: 294 LVNFLWNTLLENIDSKSKILDIISEPSHLLFDAAEVGNFGFLSELISAYPSLIWEVDSRN 353
Query: 316 RSIFHIAVMHRHADTFKLIYEMGFDKELIATYV-DVSGNNLLHLAAQYSNPKPISKVPGA 374
RSI H AV++RHA + LI+E+G K++I T+ + N LLHLAA+ + P + V GA
Sbjct: 354 RSIIHTAVLNRHASIYNLIHEIGSIKDIIVTFAGEEDENTLLHLAAKLAPPSQLELVSGA 413
Query: 375 ALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCS 434
A +M E+ F+EV I+ PSF+ MKN++G T ELFT EH L + AE WMK AESC
Sbjct: 414 AFQMSLEISWFEEVNKIMPPSFRWMKNSEGLTARELFTKEHADLRKNAESWMKRTAESCM 473
Query: 435 IVATLATAGVFQAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSI 494
+++T+ GVF AA + PGG D PN+ K F IF +S+A + S ++L+FLSI
Sbjct: 474 LISTVIATGVFSAAISTPGGMNDESKEPNYLDKTSFLIFAVSDATSLISSATAILIFLSI 533
Query: 495 LITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRDRMNCFSMLTIILV 554
LI SRY E DF K LP KL FGL++LFI++ +MM++F SFF+ Y M +L
Sbjct: 534 LI-SRYAEYDFHKSLPLKLIFGLISLFISITSMMVAFGCSFFITYYYGMKWVPSFISVLA 592
Query: 555 FLPVALYLLLQCRLQGDILYST--CRSRFLVGPK 586
LP+ L++ LQ L I+YST C++ F G K
Sbjct: 593 CLPILLFIGLQFSLWSVIIYSTYYCKALFKPGKK 626
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147784800|emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 333/586 (56%), Gaps = 51/586 (8%)
Query: 49 AALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS 108
AAL GD AK L + Q+ +RA +T+ +T LH+A GA+ T FV+++V+L D+L +
Sbjct: 181 AALNGDWKSAKAFLESNPQA-VRARITRRSETALHIAAGARHTRFVEELVKLMKPDDL-A 238
Query: 109 LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY 168
LQ++ GNTA CFAAA G IA+ M+ +N L IRG +TPLY+AAL G M +LY
Sbjct: 239 LQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDMVRYLY 298
Query: 169 R-QNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227
EDNL +D +I L+ +AL +L ++ +L A A TA+H+LAR P
Sbjct: 299 SVTEEDNLTKEDRIGLLVAAITANLFDVALHMLHEDPEL-AMARDGNGDTALHVLARKPL 357
Query: 228 AFTSN--------------------CPGWLK-------------------------VPGI 242
AF S C ++ VPG
Sbjct: 358 AFYSGRARQRGVFLLYSATKGEVRLCLNVIRSLCSASTHVFYXFNSQTYFGLLPHAVPGF 417
Query: 243 KFITNNTDSSTQALELVKCLWKEISKSTHK-DVLKLISKPSKLLFDAAHSGNFKFLAVLT 301
K + + QALELV+ LW +I H + +LI PS+LLF AA G +F+ VL
Sbjct: 418 KSVYDKKLMHIQALELVQQLWDKILSLDHDPKIGELIRTPSRLLFTAAELGIVEFITVLI 477
Query: 302 RSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ 361
RSYPDL+ ++++ ++IFH+AV HR F LIYE+G K+ IA Y D NN+LHLA +
Sbjct: 478 RSYPDLIWKVNDQSQTIFHVAVAHRQEKIFNLIYEIGAHKDYIAAYKDEKNNNMLHLAGK 537
Query: 362 YSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEE 421
+ + GAA ++Q+EL FKEVE I++PS+ EMKN G+TP LFT+EHK L+ E
Sbjct: 538 LAPSNRLKIDSGAAFQLQRELHWFKEVEKIIQPSYTEMKNEQGRTPQILFTEEHKDLVRE 597
Query: 422 AEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDGEGTPNFHSKIWFHIFVMSEAIAF 481
EKWMK A SC +VATL +F AAF+ PGGN D G P F +K F +F +S+A+A
Sbjct: 598 GEKWMKDTASSCMVVATLIATVMFAAAFSVPGGNDDDTGRPIFLTKKSFLVFAISDALAL 657
Query: 482 SCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLAYRD 541
S S+L+FLSIL TSRY E DFL+ LP +L GL TLFI++ATMM++F ++ F+
Sbjct: 658 FSSATSILIFLSIL-TSRYAEEDFLESLPNRLIIGLATLFISVATMMIAFCATLFIVLGP 716
Query: 542 RMNCFSMLTIILVFLPVALYLLLQCRLQGDILYSTCRSRFLVGPKY 587
+ + ++ +PV L+ LL+ L D++ RS + P +
Sbjct: 717 ELVWVANPMALVACVPVTLFPLLKFPLFIDMISHRYRSSIIFRPTH 762
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 587 | ||||||
| TAIR|locus:2165174 | 347 | AT5G35810 "AT5G35810" [Arabido | 0.558 | 0.945 | 0.397 | 2.8e-57 | |
| TAIR|locus:2080240 | 574 | AT3G54070 "AT3G54070" [Arabido | 0.749 | 0.766 | 0.350 | 7.8e-55 | |
| TAIR|locus:2175413 | 669 | AT5G04700 "AT5G04700" [Arabido | 0.413 | 0.363 | 0.433 | 3.7e-51 | |
| TAIR|locus:2180228 | 625 | AT5G04690 "AT5G04690" [Arabido | 0.780 | 0.732 | 0.323 | 3.3e-47 | |
| TAIR|locus:2175448 | 603 | AT5G04730 "AT5G04730" [Arabido | 0.541 | 0.527 | 0.355 | 6.8e-47 | |
| TAIR|locus:2165194 | 282 | AT5G35830 [Arabidopsis thalian | 0.298 | 0.620 | 0.358 | 5e-24 | |
| TAIR|locus:2128781 | 677 | AT4G03460 "AT4G03460" [Arabido | 0.287 | 0.249 | 0.269 | 5.4e-10 | |
| TAIR|locus:2009046 | 573 | AT1G34050 "AT1G34050" [Arabido | 0.761 | 0.780 | 0.235 | 1.4e-08 | |
| TAIR|locus:2012873 | 578 | AT1G10340 "AT1G10340" [Arabido | 0.183 | 0.186 | 0.274 | 1.5e-08 | |
| ZFIN|ZDB-GENE-030728-7 | 1614 | trpn1 "transient receptor pote | 0.119 | 0.043 | 0.351 | 1.5e-08 |
| TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 134/337 (39%), Positives = 192/337 (56%)
Query: 253 TQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLD 312
T A +V+ LW + K +++ + + LLFDAA SGN + L +L RSYPDL+ +D
Sbjct: 3 TLAHMVVEELWSFVIKLPVEEISQFVGSSPMLLFDAAQSGNLELLLILIRSYPDLIWTVD 62
Query: 313 ENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGN-NLLHLAAQYSNPKPISKV 371
+S+FHIA ++RH F IYE+G K+LIA Y + N NLLHL A+ P + V
Sbjct: 63 HKNQSLFHIAAINRHEKIFNRIYELGAIKDLIAMYKEKESNDNLLHLVARLPPPNRLQVV 122
Query: 372 PGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAE 431
GAAL+MQ+E+ +K V+ IV + + KN + +LFT EH L +E EKWMK A
Sbjct: 123 SGAALQMQREILWYKAVKEIVPRVYIKTKNKKEEVAHDLFTKEHDNLRKEGEKWMKETAT 182
Query: 432 SCSIVATLATAGVFQAAFTPPGGNK-DGE----GTPNFHSKIWFHIFVMSEAIAFSCSCI 486
+C +V+TL VF AAFT PGGN G+ G P F + WF +F++S+++A S
Sbjct: 183 ACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVT 242
Query: 487 SMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLXXXXXXXLAYRDRMNCF 546
S+++FLSIL TSRY E F LP KL GLL LF+++ +M+L L RD+ +
Sbjct: 243 SIMIFLSIL-TSRYAEASFQTTLPTKLMLGLLALFVSIISMVLAFTATLILI-RDQEPKW 300
Query: 547 SMLTIIXXXXXXXXXXXX-QCRLQGDILYSTCRSRFL 582
S++ ++ +L D L S S+FL
Sbjct: 301 SLILLVYVASATALSFVVLHFQLWFDTLRSAYLSKFL 337
|
|
| TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 167/477 (35%), Positives = 246/477 (51%)
Query: 69 MLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVE 128
M +A +T ++T + + K+ N V+Q +TG N A A A +
Sbjct: 54 MYKAVLTGDWKTASTLIS-RKECNVVEQ---ITG----------NSEIALHIAVAAKHKD 99
Query: 129 IAQFMLQR-NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVS 187
+ +L+ +P L+++ TPL AA G + A L D PD
Sbjct: 100 FVRNLLREMDPPDLSLKNKDGNTPLSFAAALGDIETAEMLINMIRDL--PDISNEKTMTP 157
Query: 188 IE-TGLYGXXXXXXXXXXXXXA-GATHAKYGTAMH-MLARNPSAFTSNCPGWL--KVPGI 242
I LYG +Y H M++ + ++ P W+ +V
Sbjct: 158 IHIAALYGHGEMVQYLFSKTSIKDLNDQQYLNLFHTMISADIYGVFADVPLWMLERVDLY 217
Query: 243 KFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISK--PSKLLFDAAHSGNFKFLAVL 300
+ +S +AL L L ++ S +HK L L + S LLFDAA GN + L +L
Sbjct: 218 RKELALYPNSNKALHL---LARKTSAISHKSQLNLFQQVASSWLLFDAAELGNVEILVIL 274
Query: 301 TRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDV-SGNNLLHLA 359
RS+ DL+ +D N R++FH+A ++RH + F LIYE+G K+LIA+Y + S + LLHL
Sbjct: 275 IRSHLDLLWIVDNNNRTLFHVAALYRHENIFSLIYELGGIKDLIASYKEKQSKDTLLHLV 334
Query: 360 AQYSNPKPISKV-PGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTL 418
A+ P +V GAAL MQ+EL FK V+ IV S+ E KN G+ ++FT++H+ L
Sbjct: 335 ARLP-PMNRQQVGSGAALHMQKELLWFKAVKEIVPRSYIETKNTKGELAHDIFTEQHENL 393
Query: 419 LEEAEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKD-GE-----GTPNFHSKIWFHI 472
+E E+WMK A +C + ATL VF AA T PGGN D G+ G PNF ++ F I
Sbjct: 394 RKEGERWMKETATACMLGATLIATVVFAAAITIPGGNDDSGDKANTLGFPNFRKRLLFDI 453
Query: 473 FVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMML 529
F +S+++A S +S+++FLSI TSRY E DF LP KL FGL LFI++ +M+L
Sbjct: 454 FTLSDSVALFSSMMSIVIFLSIF-TSRYAEEDFRYDLPTKLMFGLSALFISIISMIL 509
|
|
| TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 445 (161.7 bits), Expect = 3.7e-51, Sum P(2) = 3.7e-51
Identities = 108/249 (43%), Positives = 146/249 (58%)
Query: 284 LLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRS-IFHIAVMHRHADTFKLIYEMGFDKE 342
LLF A GN FL + R+ +L+ + S +F +AV R F L+Y + K
Sbjct: 363 LLF-AVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKY 421
Query: 343 LIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNN 402
L+ D GN +LHLA S P +S V GA L++Q+EL+ FKEVE I KE N
Sbjct: 422 LLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIEKERVNT 481
Query: 403 DGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDG-EGT 461
+ +TP E+FT EH+ L +EAEKWMK A SCS+VA L F A FT PGG D +G
Sbjct: 482 EEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGK 541
Query: 462 PNFHSKIW-FHIFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTL 520
P FH + F IF++S+ I+ SC S+L+FL IL T+RY +DFL LP K+ GL L
Sbjct: 542 P-FHLRDRRFIIFIVSDLISCFASCTSVLIFLGIL-TARYSFDDFLVFLPTKMIAGLSIL 599
Query: 521 FIALATMML 529
F+++A M++
Sbjct: 600 FVSIAAMLI 608
|
|
| TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 154/476 (32%), Positives = 224/476 (47%)
Query: 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENG--NTAFCFAAAVGSVEIAQFMLQ 135
Y+T L A VK ++ + +L +N NT A G++EIA+ ++
Sbjct: 109 YETPLLKACAYGNPEIVKLLLRRMTPEQMLPKMSQNNFYNTPLTVVAVSGNMEIAEALVA 168
Query: 136 RNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDN--LEPDDLENTF-FVSIETGL 192
+NP LL I G P+ +A Q +MA +LY + LE D F++
Sbjct: 169 KNPKLLEIPGNNGEIPVVVAVENTQMEMARYLYNRTPVQVLLEKDGFHGILLFLNAIYYK 228
Query: 193 YGXXXXXXXXXXXXXAGATHAKYGTA-MHMLARNPSAFTSNCPGWLKVPGIKFITNNTDS 251
A H + + + +LA P F G + K I +
Sbjct: 229 KLDMALDLFNKSRRLAVTKHLRIESVPIIVLASKPDLFPDTLMGKVLKCLSKCIGIDEVY 288
Query: 252 STQALEL-VKCLWKEISKSTHKDVLKLISKP--SKLLFDAAHSGNFKFLAVLTRSYPDLV 308
+ + L K L K IS+ T LK S+ LLF A GN FL + ++ +L+
Sbjct: 289 RLKVMHLQAKKLLKGISEETLALGLKERSESVDEALLF-AVRYGNVDFLVEMIKNNSELL 347
Query: 309 HQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPK-P 367
+ ++F+ AV R F L+Y +G K L D GN++LHLA Y P
Sbjct: 348 WSTGTS--TLFNTAVQVRQEKVFSLLYGLGDRKYLFLADKDSDGNSVLHLAG-YPPPNYK 404
Query: 368 ISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMK 427
++ V A L+MQ+EL+ FKE+E IV E N + TP E+F EH+ + EAEKWMK
Sbjct: 405 LATVVSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWMK 464
Query: 428 SRAESCSIVATLATAGVFQAAFTPPGGNKDGEGTPNFH--SKIWFHIFVMSEAIAFSCSC 485
A SCS+VA L F A FT PGG D G FH +I F IF++S+ I+ +C
Sbjct: 465 DTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERI-FVIFIVSDLISCFAAC 523
Query: 486 ISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLXXXXXXXLAYRD 541
S+L+FL IL T+RY +DFL LP + GL TLF+++A M++ + D
Sbjct: 524 TSVLIFLGIL-TARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFND 578
|
|
| TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 114/321 (35%), Positives = 173/321 (53%)
Query: 224 RNPSAFTSNCP-GWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPS 282
R+ F P LK GIK + +QA +L+K + + K+ ++
Sbjct: 236 RDNRLFCMTLPQSLLKWFGIKQTYDLKKRHSQAQKLLKQMCTSLRDIMAKNEIRWKETVY 295
Query: 283 KLLFDAAHSGNFKFLAVLTRSYPDLVHQLDE-NGRSIFHIAVMHRHADTFKLIYEMGFDK 341
+ L +AA SGN F + + L+ L+ +GR++F +AV + F LI+ + K
Sbjct: 296 EALLEAAKSGNRDFFIEIIKCNSQLLWILNPTSGRNLFQLAVEFKKEKIFNLIHGLDDRK 355
Query: 342 ELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKN 401
+ D NN+LH+A + S P +SK+ GAAL+MQ+E + FKEVE++V KN
Sbjct: 356 VTLLRSYDKGNNNILHIAGRLSTPDQLSKISGAALKMQRESQWFKEVESLVSEREVVQKN 415
Query: 402 NDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDGEGT 461
D KTP ++F H+ L +E E+WMK A +CS VA L FQA FT PGG G+
Sbjct: 416 KDNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGS 475
Query: 462 PNFHSKIWFHIFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLF 521
P + + F F+ ++ +AF SCIS+L+FLSIL TSRY +DF+ LP K+ G LF
Sbjct: 476 PLILNDLHFRAFIFTDTLAFFASCISVLIFLSIL-TSRYSFDDFIVSLPRKMILGQSILF 534
Query: 522 IALATMMLXXXXXXXLAYRDR 542
I++A+M++ + R +
Sbjct: 535 ISIASMLVAFITSLSASMRHK 555
|
|
| TAIR|locus:2165194 AT5G35830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 67/187 (35%), Positives = 106/187 (56%)
Query: 16 ISISITGRD-PANSVQPLQNDKKQYS------HKCVPLYKAALKGDCNEAKRILGDDHQS 68
+ + T R P PL N ++ +S K V LY+AALKGD A I+ + +
Sbjct: 54 VEVGETCRSCPNKHHSPLHNVQRNFSCDDKLRAKGVQLYQAALKGDWKAANGII-IEQKY 112
Query: 69 MLRAAVTKGYQTILHVATGAKQTNFVKQMV-ELTGHDNLLSLQDENGNTAFCFAAAVGSV 127
++ +T +T+LH+A AK FV+ ++ L +D L+L++ +GNTA CFAAA G V
Sbjct: 113 IIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESND--LALRNVDGNTALCFAAASGVV 170
Query: 128 EIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFV 186
EIA+ ++++N +L IRGGG+ TP+++AALFG +M +LY+ ++ N F
Sbjct: 171 EIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKYLYKNTRFREFNDEEFVNLFHA 230
Query: 187 SIETGLY 193
I +Y
Sbjct: 231 VISADIY 237
|
|
| TAIR|locus:2128781 AT4G03460 "AT4G03460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 53/197 (26%), Positives = 80/197 (40%)
Query: 288 AAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDK--ELIA 345
A G K L + + PD + LD +++ H+A + + K I DK E +
Sbjct: 357 AVKYGYVKILKAILKRCPDALELLDRENQNVLHVAAKNGKIEVLKFILRCCKDKNKEKLI 416
Query: 346 TYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDG- 404
D +GN LHLA + +PK +S + + + +LKT + + E KN D
Sbjct: 417 NEEDANGNTPLHLATKNWHPKVVSML---TWDNRVDLKTLNH-DGVTALDIAE-KNMDSS 471
Query: 405 -----KTPW------------ELFTDEHKTLLEEAEKWMKSRAESCSIVATLATAGVFQA 447
+ W +L T + K+ K R + +VATL F A
Sbjct: 472 YTFFERLTWMALISAGAPRGPKLILSTPVTQNSDGGKY-KDRVNTLLLVATLVATMTFTA 530
Query: 448 AFTPPGGNKDGEGTPNF 464
FT PGG +G PNF
Sbjct: 531 GFTLPGGY-NGS-VPNF 545
|
|
| TAIR|locus:2009046 AT1G34050 "AT1G34050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 120/510 (23%), Positives = 207/510 (40%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAV---TKGYQTILHVATGAKQTNFVKQMVELT 101
P+ A L D + L + + S+LR + G T+LH+AT V+ +++L
Sbjct: 20 PIIDAILANDVSTLLA-LAEGNLSVLRERYHWDSLG-GTVLHLATELGHKEIVEAIIKLC 77
Query: 102 GHDNLLSLQDENGNTAFCFAAAVGSVEI-AQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ 160
+L+ + + +G+T FAA G I AQ + + G G+ T +A +
Sbjct: 78 --PSLVGVTNLDGDTPLHFAARWGHATIVAQILASGYAEFTPVNGRGE-TAFVVACRYTN 134
Query: 161 SKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGXXXXXXXXXXXXXAGATHAKYGTAMH 220
+AS + + + F+ + G Y A + T +H
Sbjct: 135 PDVASLILEETSSITIGE-----FYATFVLGEYTDIARRMLERFPKLAWNADGELSTPLH 189
Query: 221 MLAR-NPSAFTSNCPGWLKVPGIKFITNNTDSSTQA-LELVKC---LWKEISKSTHKDVL 275
N T L++ N D T L +KC + KE S +
Sbjct: 190 HACNANNLEITKML---LEIDESLAERVNKDGFTPLHLAAMKCSIPILKEFSDKAPR-YF 245
Query: 276 KLISKPSKLLFD-AAHSGNFKFLAVLTRSYPD---LVHQLDENGRSIFHIAVMHRHADTF 331
+++ + +F AA N + S PD L+HQ+D G ++ H AVM + +
Sbjct: 246 DILTPAKETVFHLAAEHKNILAFYFMAES-PDRNNLLHQVDRYGNTVLHTAVM---SSCY 301
Query: 332 KLIYEMGFDKELIATYVDVSGNNLLHL-AAQYSN--PKPISKVPGAALEMQQELKTFKEV 388
+I + ++ T +D+S N L A N + SK+ L K++
Sbjct: 302 SVIVSITYE-----TTIDLSAKNNRGLKAVDLINVDDEDYSKI-SRWLRFDA-----KQI 350
Query: 389 ETIVKPSFKEMKNNDGKTP----WELF-TDEHKTLLEEAEKWMKSRAESCSIVATLATAG 443
++ P+ ++ N G ++F T + AE + +R + +IVA L +
Sbjct: 351 RSLSDPNHQQGNKNMGVLSEYKKMQIFETPSKRESKMHAEALLNAR-NTITIVAVLIASV 409
Query: 444 VFQAAFTPPGG-NKDG--EGTPNFHSKIWFHIFVMSEAIA-FSCSCISMLMFLSILITSR 499
F PPGG ++G +G + F +F +S IA F+ CI +L+ +SI+
Sbjct: 410 AFTCGINPPGGVYQEGPYKGKSTAGRTLAFQVFSISNNIALFTSLCIVILL-VSII---P 465
Query: 500 YRENDFLKRLPFKLTFGLLTLFIALATMML 529
YR LK KLT +L ++A+A+M L
Sbjct: 466 YRTRP-LKNF-LKLTHRIL--WVAVASMAL 491
|
|
| TAIR|locus:2012873 AT1G10340 "AT1G10340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGY--QTILHVATGAKQTNFVKQMVELTG 102
P++ A LK D ++ +D +S L + + T+LH+A V +++EL
Sbjct: 3 PIFHAILKNDLPAFLELV-EDSESSLEERNEEEHLNNTVLHMAAKFGHRELVSKIIEL-- 59
Query: 103 HDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155
+L+S ++ NT AA +G V I ML+ + + R TPL++A
Sbjct: 60 RPSLVSSRNAYRNTPLHLAAILGDVNIVMQMLETGLEVCSARNINNHTPLHLA 112
|
|
| ZFIN|ZDB-GENE-030728-7 trpn1 "transient receptor potential cation channel, subfamily N, member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 111 (44.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 288 AAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATY 347
AA SG+ + +L L+HQ D GRS H+A H H D +++ +G E+ +
Sbjct: 940 AAQSGHTAVVGLLLSRSSSLLHQADRRGRSALHLAAAHGHVDMVRVL--LGQGAEI--NH 995
Query: 348 VDVSGNNLLHLAAQ 361
D+SG LH AA+
Sbjct: 996 TDMSGWTALHYAAE 1009
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 587 | |||
| pfam13962 | 114 | pfam13962, PGG, Domain of unknown function | 1e-24 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 5e-12 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 1e-09 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 4e-08 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 3e-07 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 4e-07 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 9e-07 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 9e-06 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 2e-05 | |
| COG0666 | 235 | COG0666, Arp, FOG: Ankyrin repeat [General functio | 2e-05 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 5e-05 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 9e-05 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 1e-04 | |
| pfam13637 | 54 | pfam13637, Ank_4, Ankyrin repeats (many copies) | 1e-04 | |
| pfam13637 | 54 | pfam13637, Ank_4, Ankyrin repeats (many copies) | 4e-04 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 0.001 | |
| pfam13857 | 56 | pfam13857, Ank_5, Ankyrin repeats (many copies) | 0.002 | |
| pfam13857 | 56 | pfam13857, Ank_5, Ankyrin repeats (many copies) | 0.004 |
| >gnl|CDD|222475 pfam13962, PGG, Domain of unknown function | Back alignment and domain information |
|---|
Score = 98.3 bits (246), Expect = 1e-24
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 423 EKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDGE-----GTPNFHSKI-WFHIFVMS 476
+W++ S +VATL F A FTPPGG + GTP K F F +S
Sbjct: 1 SEWLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVS 60
Query: 477 EAIAFSCSCISMLMFLSILITSRYRENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFF 536
IAF S +++++ L I+ F +RLP +L L L+++L ++M++F++ +
Sbjct: 61 NTIAFVASLVAVILLLYIV-------PSFSRRLP-RLLALLTLLWLSLLSLMVAFAAGSY 112
Query: 537 L 537
Sbjct: 113 R 113
|
The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 5e-12
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVE 99
PL+ AA G K +L ++ + + A G T LH+A VK ++E
Sbjct: 5 EDGRTPLHLAASNGHLEVVKLLL--ENGADVNAKDNDGR-TPLHLAAKNGHLEIVKLLLE 61
Query: 100 LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAAL 157
++ +D++GNT AA G++++ + +L+ + N G TPL++AA
Sbjct: 62 ---KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDG---RTPLHLAAK 115
Query: 158 FGQSKMASFL 167
G ++ L
Sbjct: 116 NGHLEVVKLL 125
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 1e-09
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
A + +T LH+A VK ++E + ++ +D +G T AA G +EI +
Sbjct: 2 ARDEDGRTPLHLAASNGHLEVVKLLLE---NGADVNAKDNDGRTPLHLAAKNGHLEIVKL 58
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L++ + N G TPL++AA G + L
Sbjct: 59 LLEKGADVNARDKDG---NTPLHLAARNGNLDVVKLL 92
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 4e-08
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 110 QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169
+DE+G T AA+ G +E+ + +L+ ++ G+ TPL++AA G ++ L
Sbjct: 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGR-TPLHLAAKNGHLEIVKLLLE 61
Query: 170 QNEDNLEPDDLENT-FFVSIETGLYGLALQLLKKNKKLLAGATHAKYG-TAMHMLARN 225
+ D D NT ++ G + LLK + A K G T +H+ A+N
Sbjct: 62 KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNA---RDKDGRTPLHLAAKN 116
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 285 LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI 344
L AA +G+ + + +L D V+ D++G + H+A + + D KL+ + G D
Sbjct: 44 LHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNAR 102
Query: 345 ATYVDVSGNNLLHLAAQYSNPK 366
D G LHLAA+ + +
Sbjct: 103 ----DKDGRTPLHLAAKNGHLE 120
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 4e-07
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLL 141
LH+A VK ++E G D + + +TA AA G++EI + +L+ ++
Sbjct: 1 LHLAAKNGNLELVKLLLEK-GAD----VNLGDTDTALHLAARNGNLEIVKLLLEHGADVN 55
Query: 142 TIRGGGQMTPLYIAALFGQSKMASFLYRQNED 173
G T L++AA G ++ L D
Sbjct: 56 AKDKDG-NTALHLAARNGNLEIVKLLLEHGAD 86
|
Length = 91 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 9e-07
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 284 LLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL 343
L AA +G+ + + +L + D V+ D +GR+ H+A + H + KL+ E G D
Sbjct: 10 PLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD--- 65
Query: 344 IATYVDVSGNNLLHLAAQYSNPK 366
D GN LHLAA+ N
Sbjct: 66 -VNARDKDGNTPLHLAARNGNLD 87
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 9e-06
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 312 DENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPK 366
DE+GR+ H+A + H + KL+ E G D D G LHLAA+ + +
Sbjct: 4 DEDGRTPLHLAASNGHLEVVKLLLENGAD----VNAKDNDGRTPLHLAAKNGHLE 54
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-05
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 46 LYKAALKGDCNEAKRIL--GDDHQSMLRAAVTKG-YQTILHVATGAKQTNFVKQMVELTG 102
L+ AA G+ K +L G D V G T LH+A VK ++E
Sbjct: 1 LHLAAKNGNLELVKLLLEKGAD--------VNLGDTDTALHLAARNGNLEIVKLLLEHGA 52
Query: 103 HDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNL 140
N +D++GNTA AA G++EI + +L+ ++
Sbjct: 53 DVNA---KDKDGNTALHLAARNGNLEIVKLLLEHGADI 87
|
Length = 91 |
| >gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 15/171 (8%)
Query: 4 RRTNVAPASQQEISISITGRDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILG 63
++ N+ + S++ V + + + + G
Sbjct: 37 KKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASG 96
Query: 64 DDHQSMLRAAVTKGYQTILHVATGAKQTNF-----VKQMVELTGHDNLLSLQDENGNTAF 118
D A T LH+A K ++E ++ +L+DE+GNT
Sbjct: 97 AD-----VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPL 151
Query: 119 CFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+AA G +I + +L+ +PN G +T L AA G+ ++ L
Sbjct: 152 HWAALNGDADIVELLLEAGADPNSRNSYG---VTALDPAAKNGRIELVKLL 199
|
Length = 235 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEP 177
AA G++E+ + +L++ + + G T L++AA G ++ L D
Sbjct: 1 LHLAAKNGNLELVKLLLEKGAD---VNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 178 DDLENT-FFVSIETGLYGLALQLLKKN 203
D NT ++ G + LL+
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHG 84
|
Length = 91 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 9e-05
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 285 LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI 344
L AA +GN + + +L D+ L + + H+A + + + KL+ E G D
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADV--NLGDTD-TALHLAARNGNLEIVKLLLEHGADVN-- 55
Query: 345 ATYVDVSGNNLLHLAAQYSNPK 366
D GN LHLAA+ N +
Sbjct: 56 --AKDKDGNTALHLAARNGNLE 75
|
Length = 91 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
PL+ AA G K +L + + + A K T LH+A + VK +++ H
Sbjct: 43 PLHLAAKNGHLEIVKLLL--EKGADVNA-RDKDGNTPLHLAARNGNLDVVKLLLK---HG 96
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFML 134
++ +D++G T AA G +E+ + +L
Sbjct: 97 ADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 1e-04
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
G TA AA G +E+ +++L++ ++ G T L+IAA G ++ L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDG-NTALHIAAENGNLEVLKLL 53
|
Length = 54 |
| >gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 4e-04
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 315 GRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNP 365
GR+ H A + + K + E G D D GN LH+AA+ N
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVD----INRTDEDGNTALHIAAENGNL 47
|
Length = 54 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.001
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 285 LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL 343
L AA +GN + + +L D+ + D++G + H+A + + + KL+ E G D L
Sbjct: 32 LHLAARNGNLEIVKLLLEHGADVNAK-DKDGNTALHLAARNGNLEIVKLLLEHGADINL 89
|
Length = 91 |
| >gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies) | Back alignment and domain information |
|---|
Score = 36.2 bits (84), Expect = 0.002
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 305 PDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLA 359
P ++ D NG + H+A + + + + + G D D G L LA
Sbjct: 6 PIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVD----LNLRDSDGLTALDLA 56
|
Length = 56 |
| >gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies) | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 0.004
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 101 TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155
G +L + D NGNT AA G++E+ Q++L+ +L G T L +A
Sbjct: 4 HGPIDLNA-TDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGL-TALDLA 56
|
Length = 56 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 100.0 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 100.0 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 100.0 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 100.0 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 100.0 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 100.0 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 100.0 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 100.0 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 100.0 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 100.0 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 100.0 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 100.0 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.97 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.95 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.94 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.93 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.93 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.93 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.92 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.92 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.92 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.92 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.91 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.91 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.9 | |
| PF13962 | 113 | PGG: Domain of unknown function | 99.9 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.9 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.89 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.88 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.87 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.86 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.83 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.83 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.83 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.83 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.82 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.81 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.81 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.81 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.8 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.79 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.75 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.75 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.73 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.7 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.67 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.66 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.66 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.66 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.65 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.57 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.49 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.46 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.43 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.4 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.39 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.37 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.36 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.35 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.33 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.33 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.3 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.3 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.27 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 99.07 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.78 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.75 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.58 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.52 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.52 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.52 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.49 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.48 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.45 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.44 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.43 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.4 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 98.36 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.32 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 98.3 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.29 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.0 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.92 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.89 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.81 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.78 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.78 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.73 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.71 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.55 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.17 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.0 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.66 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.22 | |
| PF03158 | 192 | DUF249: Multigene family 530 protein; InterPro: IP | 94.61 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 92.31 | |
| PF03158 | 192 | DUF249: Multigene family 530 protein; InterPro: IP | 92.25 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 91.12 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 88.88 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 84.99 | |
| cd07920 | 322 | Pumilio Pumilio-family RNA binding domain. Puf rep | 84.65 | |
| cd07920 | 322 | Pumilio Pumilio-family RNA binding domain. Puf rep | 84.23 |
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-44 Score=366.27 Aligned_cols=314 Identities=21% Similarity=0.241 Sum_probs=281.5
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..|..|.+|||+|+.....+.++.|+ +.|++.... |.++.+|+|+|+..|+.+..+.|++.+ +| ++..|+.|.|
T Consensus 83 a~D~~~n~~l~~a~~~~~~~~i~~Ll--s~gad~~~~-n~~~~aplh~A~~~~~~s~L~~Ll~~~--~d-vnl~de~~~T 156 (929)
T KOG0510|consen 83 AKDSADNTPLHAAVEYNQGDKIQVLL--SYGADTPLR-NLNKNAPLHLAADSGNYSCLKLLLDYG--AD-VNLEDENGFT 156 (929)
T ss_pred hhhcccCchhHHHhhcchHHHHHHHH--hcCCCCChh-hhhccCchhhccccchHHHHHHHHHhc--CC-ccccccCCCc
Confidence 46788999999999999999999999 788888877 899999999999999999999999999 99 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC-----C-CCCCCCCCchHHHHHHHh
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN-----E-DNLEPDDLENTFFVSIET 190 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~-----~-~~~~~~~g~t~l~~a~~~ 190 (587)
|||+||+.++.|..+.|++.|++. ...|.+|.+|+|.|++.|..|+.+..+.+. . ++..+..|.+|||.|++.
T Consensus 157 pLh~A~~~~~~E~~k~Li~~~a~~-~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~ 235 (929)
T KOG0510|consen 157 PLHLAARKNKVEAKKELINKGADP-CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEG 235 (929)
T ss_pred hhhHHHhcChHHHHHHHHhcCCCC-CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhc
Confidence 999999999999889999999994 889999999999999999999999999832 2 777899999999999999
Q ss_pred CcHHHHHHHHHhc-------------ccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHH
Q 007858 191 GLYGLALQLLKKN-------------KKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALE 257 (587)
Q Consensus 191 ~~~~~v~~Ll~~~-------------~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (587)
|+.+.++..|+.. ...+++..|++|.||||+|++.|+ .+
T Consensus 236 g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~----------------------------~~ 287 (929)
T KOG0510|consen 236 GDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGG----------------------------PE 287 (929)
T ss_pred CCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCC----------------------------hh
Confidence 9999999999873 123345679999999999999998 99
Q ss_pred HHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHH-hCCCccccccCCCCchHHHHHHcCChhHHHHHHh
Q 007858 258 LVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR-SYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336 (587)
Q Consensus 258 ~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 336 (587)
.++.|+..|++++.++. ++.||||.||+.|+.+.++.||+ .+--+.+..|-.|+||||.|+++||.+++++|++
T Consensus 288 svd~Ll~~Ga~I~~kn~-----d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~ 362 (929)
T KOG0510|consen 288 SVDNLLGFGASINSKNK-----DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLN 362 (929)
T ss_pred HHHHHHHcCCcccccCC-----CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHh
Confidence 99999999999988764 77999999999999999999999 5655678889999999999999999999999999
Q ss_pred cCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhh
Q 007858 337 MGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWEL 410 (587)
Q Consensus 337 ~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~ 410 (587)
+|+.... ....|++|+||||+|++.|+...++.| +.+|+++..+|+.|++++++
T Consensus 363 ~GA~~~~-~~e~D~dg~TaLH~Aa~~g~~~av~~L-------------------i~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 363 KGALFLN-MSEADSDGNTALHLAAKYGNTSAVQKL-------------------ISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred cChhhhc-ccccccCCchhhhHHHHhccHHHHHHH-------------------HHcCCceeeccccccccccc
Confidence 9998641 114599999999999999998877666 55778887788888777773
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=394.31 Aligned_cols=332 Identities=13% Similarity=0.102 Sum_probs=265.0
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHH--------------------------------
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVAT-------------------------------- 86 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~-------------------------------- 86 (587)
+..+.||||.|+..|+.|+|+.|+ +++|..+... |..|.||||+|+
T Consensus 38 ~~~~~t~LH~A~~~g~~e~V~~ll-~~~~~~~~~~-~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 115 (682)
T PHA02876 38 ESIPFTAIHQALQLRQIDIVEEII-QQNPELIYIT-DHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKH 115 (682)
T ss_pred ccccchHHHHHHHHHhhhHHHHHH-HhCcccchhh-chhhccccccccCCCCccccccccccchhhcccccHHHHHHHHH
Confidence 567899999999999999999999 7777766655 888999999666
Q ss_pred --------------------------------------hcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHH
Q 007858 87 --------------------------------------GAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVE 128 (587)
Q Consensus 87 --------------------------------------~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~ 128 (587)
..|+.+++++|++.| ++ ++.+|..|.||||+|++.|+.+
T Consensus 116 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~G--ad-vn~~d~~G~TpLh~Aa~~G~~~ 192 (682)
T PHA02876 116 KLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGG--AD-VNAKDIYCITPIHYAAERGNAK 192 (682)
T ss_pred HHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCC--CC-CCCCCCCCCCHHHHHHHCCCHH
Confidence 457889999999999 88 9999999999999999999999
Q ss_pred HHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC------------------------------CCCCCC
Q 007858 129 IAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE------------------------------DNLEPD 178 (587)
Q Consensus 129 iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~------------------------------~~~~~~ 178 (587)
+|++|+++|+++ +..+.+|.||||+|+..|+.+++++|++.+. .+..+.
T Consensus 193 iv~~LL~~Gad~-n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~ 271 (682)
T PHA02876 193 MVNLLLSYGADV-NIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDD 271 (682)
T ss_pred HHHHHHHCCCCc-CccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 999999999996 8899999999999999999888887776543 334567
Q ss_pred CCchHHHHHHHhCcH-HHHHHHHHhcccccccccccCCchHHHHHhhCCCC--------------cccCCCCCccccchh
Q 007858 179 DLENTFFVSIETGLY-GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA--------------FTSNCPGWLKVPGIK 243 (587)
Q Consensus 179 ~g~t~l~~a~~~~~~-~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~--------------~~~~~~~~~~~~~~~ 243 (587)
.|.||||.|+..++. ++++.|++. +..++.+|.+|.||||+|+..|.. ...+..|+.+++...
T Consensus 272 ~g~TpLh~Aa~~~~~~~iv~lLl~~--gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~ 349 (682)
T PHA02876 272 CKNTPLHHASQAPSLSRLVPKLLER--GADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQAS 349 (682)
T ss_pred CCCCHHHHHHhCCCHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHH
Confidence 899999999999886 577888886 888899999999999999988742 001111222222111
Q ss_pred hhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHH
Q 007858 244 FITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAV 323 (587)
Q Consensus 244 ~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 323 (587)
.. ....++++.|++.|++++..+. .|.||||+|+..|+.++++.|+++|++ ++..+..|.||||+|+
T Consensus 350 ~~-------~~~~~iv~lLl~~gadin~~d~-----~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 350 TL-------DRNKDIVITLLELGANVNARDY-----CDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFAL 416 (682)
T ss_pred Hh-------CCcHHHHHHHHHcCCCCccCCC-----CCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHH
Confidence 10 0115677777888877776543 778888888888888888888888888 6778888888888888
Q ss_pred HcCC-hhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC-CCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccC
Q 007858 324 MHRH-ADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS-NPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKN 401 (587)
Q Consensus 324 ~~~~-~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~-~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n 401 (587)
..++ ..++++|+++|++++ .+|..|+||||+|+..+ +.++++.| +.+|++++.+|
T Consensus 417 ~~~~~~~~vk~Ll~~gadin----~~d~~G~TpLh~Aa~~~~~~~iv~lL-------------------l~~Gad~n~~d 473 (682)
T PHA02876 417 CGTNPYMSVKTLIDRGANVN----SKNKDLSTPLHYACKKNCKLDVIEML-------------------LDNGADVNAIN 473 (682)
T ss_pred HcCCHHHHHHHHHhCCCCCC----cCCCCCChHHHHHHHhCCcHHHHHHH-------------------HHCCCCCCCCC
Confidence 7655 466888888888765 68888999999888866 34554444 45899999999
Q ss_pred CCCCCchhhhHHh
Q 007858 402 NDGKTPWELFTDE 414 (587)
Q Consensus 402 ~~g~t~l~~a~~~ 414 (587)
..|.||+++|.+.
T Consensus 474 ~~g~tpl~~a~~~ 486 (682)
T PHA02876 474 IQNQYPLLIALEY 486 (682)
T ss_pred CCCCCHHHHHHHh
Confidence 9999999998763
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=365.92 Aligned_cols=307 Identities=9% Similarity=0.059 Sum_probs=259.4
Q ss_pred CChHhHHHH--HcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 42 KCVPLYKAA--LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 42 ~~t~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
+.++||.++ ..++.++++.|+ +.+.+++.+ |.+|.||||+|++.|+.++|++|+++| ++ ++.+|..|.||||
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll--~~Gadvn~~-d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Ad-in~~d~~g~TpLh 110 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELL--HRGYSPNET-DDDGNYPLHIASKINNNRIVAMLLTHG--AD-PNACDKQHKTPLY 110 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHH--HCcCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHCc--CC-CCCCCCCCCCHHH
Confidence 478999876 445788999999 788999988 999999999999999999999999999 88 9999999999999
Q ss_pred HHHHcC--CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc--HH
Q 007858 120 FAAAVG--SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGL--YG 194 (587)
Q Consensus 120 ~Aa~~g--~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~--~~ 194 (587)
+|+..+ +.+++++|+++|+++....|.+|.|||| |+..|+.+++++|++.++ .+..|..|.||||.|+..++ .+
T Consensus 111 ~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~ 189 (446)
T PHA02946 111 YLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKAS 189 (446)
T ss_pred HHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHH
Confidence 998876 4899999999999974467999999997 667799999999999998 88899999999999887654 68
Q ss_pred HHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhh
Q 007858 195 LALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDV 274 (587)
Q Consensus 195 ~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 274 (587)
++++|++. ++.++.+|.+|.||||+|+..+.. ..++++.|++ +++++..+
T Consensus 190 ~v~~Ll~~--Gadin~~d~~G~TpLH~Aa~~~~~--------------------------~~~iv~lLl~-gadin~~d- 239 (446)
T PHA02946 190 TISWMMKL--GISPSKPDHDGNTPLHIVCSKTVK--------------------------NVDIINLLLP-STDVNKQN- 239 (446)
T ss_pred HHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCC--------------------------cHHHHHHHHc-CCCCCCCC-
Confidence 99999997 999999999999999999987520 0788888885 77776654
Q ss_pred hhhccCCChHHHHHHHcCc-HHHHHHHHHhCCCc-------------------cccc-cCCCCchHHHHHHcCChhHHHH
Q 007858 275 LKLISKPSKLLFDAAHSGN-FKFLAVLTRSYPDL-------------------VHQL-DENGRSIFHIAVMHRHADTFKL 333 (587)
Q Consensus 275 ~~~~~~g~t~Lh~Aa~~g~-~~iv~~Ll~~~~~~-------------------~~~~-d~~g~t~Lh~A~~~~~~~iv~~ 333 (587)
..|.||||+|++.++ .++++.|++++++. ++.. +..|+||||+|+.+|+.+++++
T Consensus 240 ----~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~ 315 (446)
T PHA02946 240 ----KFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKY 315 (446)
T ss_pred ----CCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHH
Confidence 488999999999988 58999999987642 1111 2357799999999999999999
Q ss_pred HHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhhHH
Q 007858 334 IYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTD 413 (587)
Q Consensus 334 Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~~ 413 (587)
|+++|. .|+||||+|+..++.++++.| +.++++++.+ .+|+||+++|..
T Consensus 316 Ll~~~~-----------~~~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~n~~-~~G~t~l~~a~~ 364 (446)
T PHA02946 316 LLDNDI-----------ICEDAMYYAVLSEYETMVDYL-------------------LFNHFSVDSV-VNGHTCMSECVR 364 (446)
T ss_pred HHHCCC-----------ccccHHHHHHHhCHHHHHHHH-------------------HHCCCCCCCc-cccccHHHHHHH
Confidence 998763 479999999999987776666 6689999986 589999999976
Q ss_pred hh-hHHHH
Q 007858 414 EH-KTLLE 420 (587)
Q Consensus 414 ~~-~~l~~ 420 (587)
.+ .++++
T Consensus 365 ~~~~~~~~ 372 (446)
T PHA02946 365 LNNPVILS 372 (446)
T ss_pred cCCHHHHH
Confidence 43 44444
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=352.70 Aligned_cols=273 Identities=16% Similarity=0.206 Sum_probs=229.9
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
.|..|+..|+.+.++.++ +..+..++.. +.+|.||||.|++.|+.++|++|++.| ++ ++..+..|.||||.|+..
T Consensus 4 ~l~~ai~~gd~~~v~~ll-~~~~~~~n~~-~~~~~tpL~~A~~~g~~~iv~~Ll~~G--a~-~n~~~~~~~t~L~~A~~~ 78 (434)
T PHA02874 4 DLRMCIYSGDIEAIEKII-KNKGNCINIS-VDETTTPLIDAIRSGDAKIVELFIKHG--AD-INHINTKIPHPLLTAIKI 78 (434)
T ss_pred HHHHHHhcCCHHHHHHHH-HcCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHHHc
Confidence 588999999999999999 6677777766 788999999999999999999999999 88 889999999999999999
Q ss_pred CCHHHHHHHHhcCCcc----------------------cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCc
Q 007858 125 GSVEIAQFMLQRNPNL----------------------LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLE 181 (587)
Q Consensus 125 g~~~iv~~Ll~~~~~l----------------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~ 181 (587)
|+.+++++|+++|++. ++.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.
T Consensus 79 ~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~ 158 (434)
T PHA02874 79 GAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGC 158 (434)
T ss_pred CCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 9999999999887653 24567788888888888888888888888888 777888888
Q ss_pred hHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHH
Q 007858 182 NTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKC 261 (587)
Q Consensus 182 t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 261 (587)
||||.|+..++.++++.|++. +...+..|..|.||||+|+..++ .+++++
T Consensus 159 tpLh~A~~~~~~~iv~~Ll~~--g~~~n~~~~~g~tpL~~A~~~g~----------------------------~~iv~~ 208 (434)
T PHA02874 159 YPIHIAIKHNFFDIIKLLLEK--GAYANVKDNNGESPLHNAAEYGD----------------------------YACIKL 208 (434)
T ss_pred CHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCC----------------------------HHHHHH
Confidence 888888888888888888887 77777888888888888888887 888888
Q ss_pred HHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcC-ChhHHHHHHhcCcc
Q 007858 262 LWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHR-HADTFKLIYEMGFD 340 (587)
Q Consensus 262 Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~-~~~iv~~Ll~~g~~ 340 (587)
|++.|++++..+ ..|.||||.|+..+. +.+++|+ .+++ ++.+|.+|+||||+|+..+ +.+++++|+++|++
T Consensus 209 Ll~~g~~i~~~~-----~~g~TpL~~A~~~~~-~~i~~Ll-~~~~-in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad 280 (434)
T PHA02874 209 LIDHGNHIMNKC-----KNGFTPLHNAIIHNR-SAIELLI-NNAS-INDQDIDGSTPLHHAINPPCDIDIIDILLYHKAD 280 (434)
T ss_pred HHhCCCCCcCCC-----CCCCCHHHHHHHCCh-HHHHHHH-cCCC-CCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCC
Confidence 888888776544 367888888888765 4555555 4667 6788888888888888865 67888888888888
Q ss_pred hhhhhhhccCCCCcHHHHHHHcCC
Q 007858 341 KELIATYVDVSGNNLLHLAAQYSN 364 (587)
Q Consensus 341 ~~~~~~~~d~~G~TpLhlA~~~~~ 364 (587)
++ .+|..|+||||+|++.++
T Consensus 281 ~n----~~d~~g~TpL~~A~~~~~ 300 (434)
T PHA02874 281 IS----IKDNKGENPIDTAFKYIN 300 (434)
T ss_pred CC----CCCCCCCCHHHHHHHhCC
Confidence 65 688888888888888763
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=351.69 Aligned_cols=284 Identities=14% Similarity=0.096 Sum_probs=244.4
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC--CHHHHHHHHHccCCCCccc-cCCCC
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK--QTNFVKQMVELTGHDNLLS-LQDEN 113 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~ll~-~~d~~ 113 (587)
..+..|.||||+|+..|+.++++.|+ +++++++.+ |.+|.||||+|+..+ +.+++++|+++| ++ ++ ..|..
T Consensus 67 ~~d~~G~TpLh~Aa~~g~~eiv~lLL--~~GAdin~~-d~~g~TpLh~A~~~~~~~~e~v~lLl~~G--ad-in~~~d~~ 140 (446)
T PHA02946 67 ETDDDGNYPLHIASKINNNRIVAMLL--THGADPNAC-DKQHKTPLYYLSGTDDEVIERINLLVQYG--AK-INNSVDEE 140 (446)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH--HCcCCCCCC-CCCCCCHHHHHHHcCCchHHHHHHHHHcC--CC-cccccCCC
Confidence 45778999999999999999999999 689999987 999999999998876 489999999999 88 77 47899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCC--hHHHHHHhhcCC-CCCCCCCCchHHHHHHHh
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ--SKMASFLYRQNE-DNLEPDDLENTFFVSIET 190 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~--~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~ 190 (587)
|.|||| |+..|+.+++++|++.|+++ +.+|..|+||||+|+..++ .+++++|++.++ .+..|.+|.||||+|+..
T Consensus 141 g~tpL~-aa~~~~~~vv~~Ll~~gad~-~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~ 218 (446)
T PHA02946 141 GCGPLL-ACTDPSERVFKKIMSIGFEA-RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK 218 (446)
T ss_pred CCcHHH-HHHCCChHHHHHHHhccccc-cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 999998 66779999999999999996 9999999999999987655 689999999999 888999999999999998
Q ss_pred C--cHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhc
Q 007858 191 G--LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK 268 (587)
Q Consensus 191 ~--~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~ 268 (587)
+ +.++++.|++ +++++.+|..|.||||+|+..++. .++++.|++++..
T Consensus 219 ~~~~~~iv~lLl~---gadin~~d~~G~TpLh~A~~~~~~---------------------------~~~~~~Ll~~g~~ 268 (446)
T PHA02946 219 TVKNVDIINLLLP---STDVNKQNKFGDSPLTLLIKTLSP---------------------------AHLINKLLSTSNV 268 (446)
T ss_pred CCCcHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHhCCh---------------------------HHHHHHHHhCCCC
Confidence 6 7889988873 688899999999999999998751 4677777777654
Q ss_pred cchhh---------------hhhh-ccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHH
Q 007858 269 STHKD---------------VLKL-ISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK 332 (587)
Q Consensus 269 ~~~~~---------------~~~~-~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 332 (587)
.+... .... ...|.||||+|+.+|+.+++++|+++++ .|+||||+|+.+++.++++
T Consensus 269 ~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~--------~~~t~L~~A~~~~~~~~v~ 340 (446)
T PHA02946 269 ITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI--------ICEDAMYYAVLSEYETMVD 340 (446)
T ss_pred CCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC--------ccccHHHHHHHhCHHHHHH
Confidence 32211 0111 1246799999999999999999999864 4789999999999999999
Q ss_pred HHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 333 LIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 333 ~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+|+++|++++ .+ .+|+||||+|+..++.++++.|
T Consensus 341 ~Ll~~ga~~n----~~-~~G~t~l~~a~~~~~~~~~~~l 374 (446)
T PHA02946 341 YLLFNHFSVD----SV-VNGHTCMSECVRLNNPVILSKL 374 (446)
T ss_pred HHHHCCCCCC----Cc-cccccHHHHHHHcCCHHHHHHH
Confidence 9999999976 44 5899999999999998877665
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=354.15 Aligned_cols=308 Identities=13% Similarity=0.079 Sum_probs=250.4
Q ss_pred HHcCCHHHHHHHHhhcCc-cchhhhcCCCCCcHHHHHHh--cCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCC
Q 007858 50 ALKGDCNEAKRILGDDHQ-SMLRAAVTKGYQTILHVATG--AKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGS 126 (587)
Q Consensus 50 a~~g~~~~v~~Ll~~~~~-~~~~~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~ 126 (587)
.+.++.+++++|+ +.+ .+++...|..|.||||.|+. .++.++|++|+++| ++ ++.+|..|.||||+|++.|+
T Consensus 150 ~~~v~leiVk~LL--e~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~G--AD-VN~kD~~G~TPLH~Aa~~g~ 224 (764)
T PHA02716 150 TRGIDLDLIKYMV--DVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNG--VN-VNLQNNHLITPLHTYLITGN 224 (764)
T ss_pred ccCCCHHHHHHHH--HCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcC--CC-CCCCCCCCCCHHHHHHHcCC
Confidence 3568999999999 566 88887657889999999875 46799999999999 89 99999999999999999995
Q ss_pred --HHHHHHHHhcCCcccccCCCCCCcHHHHHH---HhCChHHHHHHhhcCCCCCCCCCCchHHH---HHHHhCcHHHHHH
Q 007858 127 --VEIAQFMLQRNPNLLTIRGGGQMTPLYIAA---LFGQSKMASFLYRQNEDNLEPDDLENTFF---VSIETGLYGLALQ 198 (587)
Q Consensus 127 --~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~---~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~---~a~~~~~~~~v~~ 198 (587)
.++|++|+++|+++ +.+|..|.||||+|+ ..++.|+++.|++....+. ......+++ .|+..|+.++++.
T Consensus 225 ~~~eIVklLLe~GADV-N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~-~~~~~~~L~~~i~AA~~g~leiVkl 302 (764)
T PHA02716 225 VCASVIKKIIELGGDM-DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK-VKNIPMILHSYITLARNIDISVVYS 302 (764)
T ss_pred CCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc-cccchhhhHHHHHHHHcCCHHHHHH
Confidence 59999999999996 999999999999885 5678999999998754111 111223343 4788899999999
Q ss_pred HHHhcccccccccccCCchHHHHHhhC--CCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh
Q 007858 199 LLKKNKKLLAGATHAKYGTAMHMLARN--PSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK 276 (587)
Q Consensus 199 Ll~~~~~~~~~~~d~~g~t~Lh~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 276 (587)
|++. ++.++.+|..|+||||+|+.. ++ .+++++|++.|++++..+
T Consensus 303 LLe~--GAdIN~kD~~G~TPLH~Aaa~~~~~----------------------------~eIVklLLe~GADIN~kD--- 349 (764)
T PHA02716 303 FLQP--GVKLHYKDSAGRTCLHQYILRHNIS----------------------------TDIIKLLHEYGNDLNEPD--- 349 (764)
T ss_pred HHhC--CCceeccCCCCCCHHHHHHHHhCCC----------------------------chHHHHHHHcCCCCccCC---
Confidence 9997 888999999999999997643 33 799999999999988765
Q ss_pred hccCCChHHHHHHH--------------cCcHHHHHHHHHhCCCccccccCCCCchHHH----HHHcCChhHHHHHHhcC
Q 007858 277 LISKPSKLLFDAAH--------------SGNFKFLAVLTRSYPDLVHQLDENGRSIFHI----AVMHRHADTFKLIYEMG 338 (587)
Q Consensus 277 ~~~~g~t~Lh~Aa~--------------~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~----A~~~~~~~iv~~Ll~~g 338 (587)
..|.||||.|+. .++.++++.|+++|++ ++.+|..|+||||. |...++.+++++|++.|
T Consensus 350 --~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GAD-In~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~ 426 (764)
T PHA02716 350 --NIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGAD-ITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK 426 (764)
T ss_pred --CCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCC-CCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence 488999999875 3789999999999999 79999999999994 23347789999998865
Q ss_pred cchh---------------------------------------------------------hhhhhccCCCCcHHHHHHH
Q 007858 339 FDKE---------------------------------------------------------LIATYVDVSGNNLLHLAAQ 361 (587)
Q Consensus 339 ~~~~---------------------------------------------------------~~~~~~d~~G~TpLhlA~~ 361 (587)
+... ...|.+|..|+||||+|+.
T Consensus 427 ~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~ 506 (764)
T PHA02716 427 VLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSII 506 (764)
T ss_pred chhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHH
Confidence 3210 0124568899999999999
Q ss_pred cCCCCCCCCCCCchHHHHHHhhhHHHHHH-hcccccccccCCCCCCchhhhHHhh
Q 007858 362 YSNPKPISKVPGAALEMQQELKTFKEVET-IVKPSFKEMKNNDGKTPWELFTDEH 415 (587)
Q Consensus 362 ~~~~~~~~~l~~~~~~~~~~l~~~~~v~~-l~~~~~~~~~n~~g~t~l~~a~~~~ 415 (587)
.|+.+.+.. +.++. +..|++++.+|++|+||||+|.++.
T Consensus 507 ~g~~~~v~~---------------e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g 546 (764)
T PHA02716 507 SHTNANIVM---------------DSFVYLLSIQYNINIPTKNGVTPLMLTMRNN 546 (764)
T ss_pred cCCccchhH---------------HHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Confidence 988654410 01122 4579999999999999999998754
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=350.72 Aligned_cols=280 Identities=14% Similarity=0.160 Sum_probs=254.0
Q ss_pred HHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC---CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 47 YKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK---QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 47 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
..++..++.++++.|+ +.+++++.. +..|.||||.|+..| +.+++++|++.| ++ ++.+|..|.||||+|+.
T Consensus 19 ~~~~~~~~~~~v~~Ll--~~ga~vn~~-~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G--ad-in~~~~~g~TpLh~A~~ 92 (471)
T PHA03095 19 LLNASNVTVEEVRRLL--AAGADVNFR-GEYGKTPLHLYLHYSSEKVKDIVRLLLEAG--AD-VNAPERCGFTPLHLYLY 92 (471)
T ss_pred HHcCCCCCHHHHHHHH--HcCCCcccC-CCCCCCHHHHHHHhcCCChHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHHH
Confidence 5678889999999999 779999987 899999999999998 999999999999 89 99999999999999999
Q ss_pred cC-CHHHHHHHHhcCCcccccCCCCCCcHHHHHH--HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhC--cHHHHH
Q 007858 124 VG-SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA--LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETG--LYGLAL 197 (587)
Q Consensus 124 ~g-~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~--~~~~v~ 197 (587)
.| +.+++++|+++|+++ +.+|..|.||||+|+ ..++.+++++|++.++ ++..+..|.||||.|+..+ ..++++
T Consensus 93 ~~~~~~iv~lLl~~ga~i-n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~ 171 (471)
T PHA03095 93 NATTLDVIKLLIKAGADV-NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLR 171 (471)
T ss_pred cCCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHH
Confidence 99 599999999999996 999999999999999 5568899999999999 8889999999999998876 689999
Q ss_pred HHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhh
Q 007858 198 QLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKL 277 (587)
Q Consensus 198 ~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 277 (587)
.|++. +......|..|.||||+++..... ..++++.|++.|.+++..+.
T Consensus 172 ~Ll~~--g~~~~~~d~~g~t~Lh~~~~~~~~--------------------------~~~i~~~Ll~~g~~~~~~d~--- 220 (471)
T PHA03095 172 LLIDA--GADVYAVDDRFRSLLHHHLQSFKP--------------------------RARIVRELIRAGCDPAATDM--- 220 (471)
T ss_pred HHHHc--CCCCcccCCCCCCHHHHHHHHCCC--------------------------cHHHHHHHHHcCCCCcccCC---
Confidence 99998 777777799999999999875320 07899999999999887654
Q ss_pred ccCCChHHHHHHHcCcH--HHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcH
Q 007858 278 ISKPSKLLFDAAHSGNF--KFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNL 355 (587)
Q Consensus 278 ~~~g~t~Lh~Aa~~g~~--~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp 355 (587)
.|.||||.|+..|+. .+++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||
T Consensus 221 --~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n----~~~~~g~tp 293 (471)
T PHA03095 221 --LGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIALGADIN----AVSSDGNTP 293 (471)
T ss_pred --CCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc----ccCCCCCCH
Confidence 889999999999975 688899999999 79999999999999999999999999999999976 699999999
Q ss_pred HHHHHHcCCCCCCCCC
Q 007858 356 LHLAAQYSNPKPISKV 371 (587)
Q Consensus 356 LhlA~~~~~~~~~~~l 371 (587)
||+|+..++.++++.+
T Consensus 294 l~~A~~~~~~~~v~~L 309 (471)
T PHA03095 294 LSLMVRNNNGRAVRAA 309 (471)
T ss_pred HHHHHHhCCHHHHHHH
Confidence 9999999998877665
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=339.78 Aligned_cols=315 Identities=17% Similarity=0.173 Sum_probs=275.5
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|.|++|.|+..+.. + ..-...... |..|+||||+|+..+..+.++.|++.| ++ ++..|..+.+
T Consensus 56 ~~~~~gd~~~~~~~~~~y~------~--~~~~~~~a~-D~~~n~~l~~a~~~~~~~~i~~Lls~g--ad-~~~~n~~~~a 123 (929)
T KOG0510|consen 56 GKRAFGDTELHHASARNYI------L--SKLAISYAK-DSADNTPLHAAVEYNQGDKIQVLLSYG--AD-TPLRNLNKNA 123 (929)
T ss_pred hhhhhchhHHHHHHhhcch------h--hhhhhhhhh-hcccCchhHHHhhcchHHHHHHHHhcC--CC-CChhhhhccC
Confidence 4567899999999988866 2 122233344 888999999999999999999999999 88 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
|+|+|+..|+.++.+.|+++|+++ +..|+.|.||||+||..++.|..+.|++.++ +...+.+|.+|+|.|++.|..+.
T Consensus 124 plh~A~~~~~~s~L~~Ll~~~~dv-nl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~ 202 (929)
T KOG0510|consen 124 PLHLAADSGNYSCLKLLLDYGADV-NLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKEC 202 (929)
T ss_pred chhhccccchHHHHHHHHHhcCCc-cccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhh
Confidence 999999999999999999999996 9999999999999999999998899999999 77789999999999999999999
Q ss_pred HHHHHHh---cccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchh
Q 007858 196 ALQLLKK---NKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHK 272 (587)
Q Consensus 196 v~~Ll~~---~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~ 272 (587)
.+..+.. .....++..+..|.||||.|+..|+ .+.++.+++.+......
T Consensus 203 mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~----------------------------~e~lk~~L~n~~~~a~~ 254 (929)
T KOG0510|consen 203 MEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGD----------------------------IEMLKMCLQNGKKIADV 254 (929)
T ss_pred hhhhhccccchhhcccccccCCCCcchhhhhhcCC----------------------------HHHHHHHHhCccccchh
Confidence 9999983 1256677889999999999999998 89999999888755433
Q ss_pred h----------hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 273 D----------VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 273 ~----------~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
. .++++.+|.||||+||+.|+.+.++.|+..|++ ++.++.++.||||.|+.+|+.+.++-|++ ..+..
T Consensus 255 ~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~r 332 (929)
T KOG0510|consen 255 QLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTR 332 (929)
T ss_pred hhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHHHHHHHHh-CcCcc
Confidence 2 245788999999999999999999999999999 79999999999999999999999999999 33433
Q ss_pred hhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhccccccc---ccCCCCCCchhhhHHh
Q 007858 343 LIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKE---MKNNDGKTPWELFTDE 414 (587)
Q Consensus 343 ~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~---~~n~~g~t~l~~a~~~ 414 (587)
++|+.|-.|.||||+|++.|+..+++.| +..|+... ..|.+|.||||.|+..
T Consensus 333 -llne~D~~g~tpLHlaa~~gH~~v~qlL-------------------l~~GA~~~~~~e~D~dg~TaLH~Aa~~ 387 (929)
T KOG0510|consen 333 -LLNESDLHGMTPLHLAAKSGHDRVVQLL-------------------LNKGALFLNMSEADSDGNTALHLAAKY 387 (929)
T ss_pred -ccccccccCCCchhhhhhcCHHHHHHHH-------------------HhcChhhhcccccccCCchhhhHHHHh
Confidence 4889999999999999999998877766 44565555 4599999999999654
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=336.95 Aligned_cols=348 Identities=11% Similarity=0.114 Sum_probs=268.5
Q ss_pred cccCCCChHhHHHHHcC---CHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC--CHHHHHHHHHccCCCCccccCC
Q 007858 37 KQYSHKCVPLYKAALKG---DCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK--QTNFVKQMVELTGHDNLLSLQD 111 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~ll~~~d 111 (587)
..+..|.||||+|+..| +.++|+.|+ ++|++++.+ |..|.||||+|+..| +.|+|++|++.|..++ .+..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLL--s~GAdin~k-D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~-~~~~~ 111 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLL--SRGVERLCR-NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNAS-NELTS 111 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHH--hCCCCCccc-CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCC-ccccc
Confidence 45678999999999997 599999999 799999988 999999999999977 7999999999985566 67888
Q ss_pred CCCCcHHHHHHH--cCCHHHHHHHHh-cCCcccccCC-----CCCCcHHHHHHHhCChHHHHHHhhcCC-CC--------
Q 007858 112 ENGNTAFCFAAA--VGSVEIAQFMLQ-RNPNLLTIRG-----GGQMTPLYIAALFGQSKMASFLYRQNE-DN-------- 174 (587)
Q Consensus 112 ~~g~TpLh~Aa~--~g~~~iv~~Ll~-~~~~l~~~~~-----~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~-------- 174 (587)
..+.+|||.++. +++.++|++|++ .+.+. +..+ ..|.+|++++...++.|+|++|+++|+ ++
T Consensus 112 ~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~-~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~ 190 (672)
T PHA02730 112 NINDFDLYSYMSSDNIDLRLLKYLIVDKRIRP-SKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCM 190 (672)
T ss_pred ccCCchHHHHHHhcCCcHHHHHHHHHhcCCCh-hhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccc
Confidence 889999999988 899999999997 55564 3332 378999999999999999999999999 52
Q ss_pred CCCCCCchHHHHHH------HhCcHHHHHHHHHhcccccccccccCCchHHHHHhhC--CCC-----ccc---CCCCC--
Q 007858 175 LEPDDLENTFFVSI------ETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARN--PSA-----FTS---NCPGW-- 236 (587)
Q Consensus 175 ~~~~~g~t~l~~a~------~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~--~~~-----~~~---~~~~~-- 236 (587)
..+.-+.|.||+++ .++..|+++.|+++ |+.++.+|.+|.||||++... ++. ..+ .|..|
T Consensus 191 ~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~--GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~ 268 (672)
T PHA02730 191 YDSDRCKNSLHYYILSHRESESLSKDVIKCLIDN--NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDD 268 (672)
T ss_pred ccCCccchhHHHHHHhhhhhhccCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhcccccccccc
Confidence 22333446666444 45678999999998 999999999999999963332 221 011 11111
Q ss_pred -------------cc---------cc-ch-hh-----------------hhcc---------------------------
Q 007858 237 -------------LK---------VP-GI-KF-----------------ITNN--------------------------- 248 (587)
Q Consensus 237 -------------~~---------~~-~~-~~-----------------~~~~--------------------------- 248 (587)
+. .. .+ +. ....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~ 348 (672)
T PHA02730 269 ISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLI 348 (672)
T ss_pred ccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHH
Confidence 00 00 00 00 0000
Q ss_pred --CCCc-hHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCc----HHHHHHHHHhCCC-ccccccCCCCchHH
Q 007858 249 --TDSS-TQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGN----FKFLAVLTRSYPD-LVHQLDENGRSIFH 320 (587)
Q Consensus 249 --~~~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~----~~iv~~Ll~~~~~-~~~~~d~~g~t~Lh 320 (587)
.... .-..+++++|+++|++++.. ..|.||||+|+..++ .++++.|+++|++ .++..|.+|+||||
T Consensus 349 ~Y~~~~~~v~ieIvelLIs~GAdIN~k------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh 422 (672)
T PHA02730 349 NYLHYGDMVSIPILRCMLDNGATMDKT------TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMY 422 (672)
T ss_pred HHHhcCCcCcHHHHHHHHHCCCCCCcC------CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHh
Confidence 0001 23478999999999999853 378999999998875 8999999999973 27889999999999
Q ss_pred H---HHHcC---------ChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHH
Q 007858 321 I---AVMHR---------HADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEV 388 (587)
Q Consensus 321 ~---A~~~~---------~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v 388 (587)
. |...+ ..+++++|+++|++++ ++|..|+||||+|+..++.++++.|
T Consensus 423 ~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADIN----akD~~G~TPLh~Aa~~~~~eive~L----------------- 481 (672)
T PHA02730 423 GLILSRFNNCGYHCYETILIDVFDILSKYMDDID----MIDNENKTLLYYAVDVNNIQFARRL----------------- 481 (672)
T ss_pred HHHHHHhccccccccchhHHHHHHHHHhcccchh----ccCCCCCCHHHHHHHhCCHHHHHHH-----------------
Confidence 4 33332 2256999999999976 7999999999999999987766665
Q ss_pred HHhcccccccccCC-CCCCchhhhHHh---hhHHHH
Q 007858 389 ETIVKPSFKEMKNN-DGKTPWELFTDE---HKTLLE 420 (587)
Q Consensus 389 ~~l~~~~~~~~~n~-~g~t~l~~a~~~---~~~l~~ 420 (587)
+.+|++++.+|. .|.||++.|... +.++++
T Consensus 482 --I~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~ 515 (672)
T PHA02730 482 --LEYGASVNTTSRSIINTAIQKSSYRRENKTKLVD 515 (672)
T ss_pred --HHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHH
Confidence 668999999997 599999999763 444444
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=352.47 Aligned_cols=281 Identities=16% Similarity=0.164 Sum_probs=251.3
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccC---------------
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTG--------------- 102 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~--------------- 102 (587)
.+..|+||||.|+..|+.++|+.|+ +.+++++.. +.+|.||||.|+..|+.+++++|++.+.
T Consensus 174 ~d~~G~TpLh~Aa~~G~~~iv~~LL--~~Gad~n~~-~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~ 250 (682)
T PHA02876 174 KDIYCITPIHYAAERGNAKMVNLLL--SYGADVNII-ALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRN 250 (682)
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHH--HCCCCcCcc-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHc
Confidence 4667999999999999999999999 788888877 8899999999999999999888876541
Q ss_pred ------------CCCccccCCCCCCcHHHHHHHcCCH-HHHHHHHhcCCcccccCCCCCCcHHHHHHHhC-ChHHHHHHh
Q 007858 103 ------------HDNLLSLQDENGNTAFCFAAAVGSV-EIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG-QSKMASFLY 168 (587)
Q Consensus 103 ------------~~~ll~~~d~~g~TpLh~Aa~~g~~-~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g-~~~~v~~Ll 168 (587)
+.+ ++..|..|.||||+|+..|+. +++++|++.|+++ +.+|.+|.||||+|+..| +.+++++|+
T Consensus 251 ~~~~~~~~Ll~~g~~-vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll 328 (682)
T PHA02876 251 EDLETSLLLYDAGFS-VNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLI 328 (682)
T ss_pred CCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHH
Confidence 134 667788999999999999986 6999999999996 899999999999999999 599999999
Q ss_pred hcCC-CCCCCCCCchHHHHHHHhC-cHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhh
Q 007858 169 RQNE-DNLEPDDLENTFFVSIETG-LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFIT 246 (587)
Q Consensus 169 ~~~~-~~~~~~~g~t~l~~a~~~~-~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~ 246 (587)
..++ .+..+..|.||||.|+..+ ..++++.|++. +..++.+|..|.||||+|+..++
T Consensus 329 ~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~--gadin~~d~~G~TpLh~Aa~~~~------------------- 387 (682)
T PHA02876 329 MLGADVNAADRLYITPLHQASTLDRNKDIVITLLEL--GANVNARDYCDKTPIHYAAVRNN------------------- 387 (682)
T ss_pred HcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHc--CCCCccCCCCCCCHHHHHHHcCC-------------------
Confidence 9999 8889999999999999854 67888888886 99999999999999999999997
Q ss_pred ccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCc-HHHHHHHHHhCCCccccccCCCCchHHHHHHc
Q 007858 247 NNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGN-FKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325 (587)
Q Consensus 247 ~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~-~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 325 (587)
.++++.|++.|++++..+. .|.||||+|+..++ ..+++.|+++|++ ++.+|..|+||||+|+..
T Consensus 388 ---------~~iv~~Ll~~gad~~~~~~-----~g~T~Lh~A~~~~~~~~~vk~Ll~~gad-in~~d~~G~TpLh~Aa~~ 452 (682)
T PHA02876 388 ---------VVIINTLLDYGADIEALSQ-----KIGTALHFALCGTNPYMSVKTLIDRGAN-VNSKNKDLSTPLHYACKK 452 (682)
T ss_pred ---------HHHHHHHHHCCCCccccCC-----CCCchHHHHHHcCCHHHHHHHHHhCCCC-CCcCCCCCChHHHHHHHh
Confidence 9999999999998876553 78999999997665 5678999999999 799999999999999997
Q ss_pred C-ChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC
Q 007858 326 R-HADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS 363 (587)
Q Consensus 326 ~-~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~ 363 (587)
+ +.+++++|+++|++++ .+|..|+||||+|+..+
T Consensus 453 ~~~~~iv~lLl~~Gad~n----~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 453 NCKLDVIEMLLDNGADVN----AINIQNQYPLLIALEYH 487 (682)
T ss_pred CCcHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHhC
Confidence 6 6899999999999976 79999999999999865
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=343.60 Aligned_cols=285 Identities=12% Similarity=0.069 Sum_probs=229.9
Q ss_pred cCCCChHhHHHHH--cCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCC--HHHHHHHHHccCCCCccccCCCCC
Q 007858 39 YSHKCVPLYKAAL--KGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQ--TNFVKQMVELTGHDNLLSLQDENG 114 (587)
Q Consensus 39 ~~~~~t~L~~Aa~--~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~--~~iv~~Ll~~~~~~~ll~~~d~~g 114 (587)
+..|.||||.|+. .++.++++.|+ +++++++.+ |.+|.||||+|++.|+ .++|++|++.| ++ ++.+|..|
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLL--e~GADVN~k-D~~G~TPLH~Aa~~g~~~~eIVklLLe~G--AD-VN~kD~~G 247 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLC--NNGVNVNLQ-NNHLITPLHTYLITGNVCASVIKKIIELG--GD-MDMKCVNG 247 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHH--HcCCCCCCC-CCCCCCHHHHHHHcCCCCHHHHHHHHHcC--CC-CCCCCCCC
Confidence 5679999999864 46899999999 789999988 9999999999999995 59999999999 99 99999999
Q ss_pred CcHHHHH-------------------------------------HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 115 NTAFCFA-------------------------------------AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 115 ~TpLh~A-------------------------------------a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
.||||+| ++.|+.+++++|+++|+++ +.+|.+|+||||+|+.
T Consensus 248 ~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI-N~kD~~G~TPLH~Aaa 326 (764)
T PHA02716 248 MSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL-HYKDSAGRTCLHQYIL 326 (764)
T ss_pred CCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce-eccCCCCCCHHHHHHH
Confidence 9999975 4567889999999999996 8999999999999864
Q ss_pred --hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHH--------------hCcHHHHHHHHHhcccccccccccCCchHHH
Q 007858 158 --FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIE--------------TGLYGLALQLLKKNKKLLAGATHAKYGTAMH 220 (587)
Q Consensus 158 --~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~--------------~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh 220 (587)
.++.+++++|++.|+ .+..|..|.||||.|+. .++.++++.|+++ |++++.+|..|.||||
T Consensus 327 ~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~--GADIn~kn~~G~TPLh 404 (764)
T PHA02716 327 RHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL--GADITAVNCLGYTPLT 404 (764)
T ss_pred HhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC--CCCCCCcCCCCCChHH
Confidence 467899999999999 88899999999999875 3678999999998 8999999999999999
Q ss_pred HH---h-hCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh---hccCCChH--HHHHHHc
Q 007858 221 ML---A-RNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK---LISKPSKL--LFDAAHS 291 (587)
Q Consensus 221 ~a---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~---~~~~g~t~--Lh~Aa~~ 291 (587)
.+ + ..++ .+++++|++.+.......... ....+.+| +|.++..
T Consensus 405 ~y~~~a~n~~~----------------------------~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~ 456 (764)
T PHA02716 405 SYICTAQNYMY----------------------------YDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAK 456 (764)
T ss_pred HHHHHHHhcCh----------------------------HHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHh
Confidence 42 2 2233 799999998765432211100 01122232 4555544
Q ss_pred CcHH------------------HHHHHHHhCCCccccccCCCCchHHHHHHcCChh-----HHHHHHhcCcchhhhhhhc
Q 007858 292 GNFK------------------FLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHAD-----TFKLIYEMGFDKELIATYV 348 (587)
Q Consensus 292 g~~~------------------iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~-----iv~~Ll~~g~~~~~~~~~~ 348 (587)
+..+ ++..++..+.+ ++..|..|+||||+|+..|+.+ ++++|++.|++++ .+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~n-vN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN----~~ 531 (764)
T PHA02716 457 YNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYN-NAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNIN----IP 531 (764)
T ss_pred cCcchhhhhhhhhhccccccchhhHHHHHhhcc-ccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCc----cc
Confidence 4332 22333334445 5788999999999999998874 5599999999976 69
Q ss_pred cCCCCcHHHHHHHcCCC
Q 007858 349 DVSGNNLLHLAAQYSNP 365 (587)
Q Consensus 349 d~~G~TpLhlA~~~~~~ 365 (587)
|++|+||||+|++.|+.
T Consensus 532 d~~G~TPLh~A~~~g~~ 548 (764)
T PHA02716 532 TKNGVTPLMLTMRNNRL 548 (764)
T ss_pred CCCCCCHHHHHHHcCCc
Confidence 99999999999999986
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=343.08 Aligned_cols=271 Identities=18% Similarity=0.230 Sum_probs=202.9
Q ss_pred CHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH-----HHHcCCHH
Q 007858 54 DCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF-----AAAVGSVE 128 (587)
Q Consensus 54 ~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~-----Aa~~g~~~ 128 (587)
..+.++.++ +.+...+. .+..+.||||.|+..|+.++|++|++.| ++ ++..+..|.||||+ |+..|+.+
T Consensus 14 ~~~~~~~~~--~~~~~~~~-~~~~~~t~L~~A~~~~~~~ivk~Ll~~g--~~-~~~~~~~~~t~L~~~~~~~a~~~~~~~ 87 (480)
T PHA03100 14 KVKNIKYII--MEDDLNDY-SYKKPVLPLYLAKEARNIDVVKILLDNG--AD-INSSTKNNSTPLHYLSNIKYNLTDVKE 87 (480)
T ss_pred HHHHHHHHH--hcCccchh-hhcccchhhhhhhccCCHHHHHHHHHcC--CC-CCCccccCcCHHHHHHHHHHHhhchHH
Confidence 345666666 33333333 3667777777777777777777777777 66 77777777777777 77777777
Q ss_pred HHHHHHhcCCcccccCCCCCCcHHHHHH--HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhC--cHHHHHHHHHhc
Q 007858 129 IAQFMLQRNPNLLTIRGGGQMTPLYIAA--LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETG--LYGLALQLLKKN 203 (587)
Q Consensus 129 iv~~Ll~~~~~l~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~--~~~~v~~Ll~~~ 203 (587)
++++|+++|+++ +..|..|.||||+|+ ..|+.+++++|+++++ .+..+.+|.||||.|+..+ +.++++.|+++
T Consensus 88 iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~- 165 (480)
T PHA03100 88 IVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK- 165 (480)
T ss_pred HHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC-
Confidence 777777777775 777777777777777 7777777777777777 6667777777777777777 77777777776
Q ss_pred ccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCC--
Q 007858 204 KKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKP-- 281 (587)
Q Consensus 204 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g-- 281 (587)
+..++.+|..|.||||+|+..++ .+++++|+++|++++..+. .|
T Consensus 166 -g~din~~d~~g~tpL~~A~~~~~----------------------------~~iv~~Ll~~ga~~~~~~~-----~~~~ 211 (480)
T PHA03100 166 -GVDINAKNRYGYTPLHIAVEKGN----------------------------IDVIKFLLDNGADINAGDI-----ETLL 211 (480)
T ss_pred -CCCcccccCCCCCHHHHHHHhCC----------------------------HHHHHHHHHcCCCccCCCC-----CCCc
Confidence 66677777777788888777776 7777777777777665432 44
Q ss_pred ----ChHHHHHHHcCc--HHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcH
Q 007858 282 ----SKLLFDAAHSGN--FKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNL 355 (587)
Q Consensus 282 ----~t~Lh~Aa~~g~--~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp 355 (587)
.||||.|+..|+ .+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||
T Consensus 212 ~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n----~~d~~g~tp 286 (480)
T PHA03100 212 FTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN----LVNKYGDTP 286 (480)
T ss_pred HHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCCCCcH
Confidence 678888888888 8888888888877 67788888888888888888888888888888755 578888888
Q ss_pred HHHHHHcCCCCCCCCC
Q 007858 356 LHLAAQYSNPKPISKV 371 (587)
Q Consensus 356 LhlA~~~~~~~~~~~l 371 (587)
||+|+..++.++++.|
T Consensus 287 l~~A~~~~~~~iv~~L 302 (480)
T PHA03100 287 LHIAILNNNKEIFKLL 302 (480)
T ss_pred HHHHHHhCCHHHHHHH
Confidence 8888888777666555
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=333.58 Aligned_cols=303 Identities=15% Similarity=0.158 Sum_probs=255.5
Q ss_pred ccceeecCCCCCCCCCCcCCC----CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCC
Q 007858 15 EISISITGRDPANSVQPLQND----KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQ 90 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~ 90 (587)
.+..++.+.+.+....+++.+ ...+..+.||||.|+..|+.++|++|+ +.+.+++.. +..|.||||.|+..|+
T Consensus 4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll--~~Ga~~n~~-~~~~~t~L~~A~~~~~ 80 (434)
T PHA02874 4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFI--KHGADINHI-NTKIPHPLLTAIKIGA 80 (434)
T ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHcCC
Confidence 344455555555444444322 134567899999999999999999999 788888877 8899999999999999
Q ss_pred HHHHHHHHHccC---------------------CCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCC
Q 007858 91 TNFVKQMVELTG---------------------HDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQM 149 (587)
Q Consensus 91 ~~iv~~Ll~~~~---------------------~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~ 149 (587)
.+++++|+++|. +.+ ++.+|..|.||||+|+..|+.++|++|+++|+++ +.+|..|.
T Consensus 81 ~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d-~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~ 158 (434)
T PHA02874 81 HDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGC 158 (434)
T ss_pred HHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCC-CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCC
Confidence 999999998762 134 6678899999999999999999999999999996 89999999
Q ss_pred cHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCC
Q 007858 150 TPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA 228 (587)
Q Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~ 228 (587)
||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..|+.+++++|++. +...+.++..|.||||.|+..+
T Consensus 159 tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~--g~~i~~~~~~g~TpL~~A~~~~-- 234 (434)
T PHA02874 159 YPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH--GNHIMNKCKNGFTPLHNAIIHN-- 234 (434)
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCcCCCCCCCCHHHHHHHCC--
Confidence 99999999999999999999998 888999999999999999999999999998 7888889999999999999877
Q ss_pred cccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcC-cHHHHHHHHHhCCCc
Q 007858 229 FTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSG-NFKFLAVLTRSYPDL 307 (587)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g-~~~iv~~Ll~~~~~~ 307 (587)
.+.++.|+ .+.+++..+ ..|.||||+|+..+ +.+++++|++++++
T Consensus 235 ---------------------------~~~i~~Ll-~~~~in~~d-----~~G~TpLh~A~~~~~~~~iv~~Ll~~gad- 280 (434)
T PHA02874 235 ---------------------------RSAIELLI-NNASINDQD-----IDGSTPLHHAINPPCDIDIIDILLYHKAD- 280 (434)
T ss_pred ---------------------------hHHHHHHH-cCCCCCCcC-----CCCCCHHHHHHhcCCcHHHHHHHHHCcCC-
Confidence 45666666 466665543 58999999999876 89999999999999
Q ss_pred cccccCCCCchHHHHHHcC-ChhHHHHHHhcCcchhhhhhhccCCC-CcHHHHHHHcCC
Q 007858 308 VHQLDENGRSIFHIAVMHR-HADTFKLIYEMGFDKELIATYVDVSG-NNLLHLAAQYSN 364 (587)
Q Consensus 308 ~~~~d~~g~t~Lh~A~~~~-~~~iv~~Ll~~g~~~~~~~~~~d~~G-~TpLhlA~~~~~ 364 (587)
++.+|..|+||||+|+.++ +.++++.|++.+...+ ..+..+ .+++..+....+
T Consensus 281 ~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~----~~~~~~~~~~~~~~~i~~~ 335 (434)
T PHA02874 281 ISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIK----EADKLKDSDFLEHIEIKDN 335 (434)
T ss_pred CCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchh----hccccchhHHHHHHHHhcc
Confidence 7999999999999999987 7789999999987654 344444 556666655444
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=334.96 Aligned_cols=350 Identities=13% Similarity=0.100 Sum_probs=252.5
Q ss_pred cccCCCChHhHHHHHc---CCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHH----HHHHHHHccCCCCcccc
Q 007858 37 KQYSHKCVPLYKAALK---GDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTN----FVKQMVELTGHDNLLSL 109 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~----iv~~Ll~~~~~~~ll~~ 109 (587)
..+.+|.||||+|+.. |+.++|+.|+ +++++++.. +..|.||||.|+..|+.+ +++.|++.++..+ .
T Consensus 27 ~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll--~~ga~v~~~-~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n---~ 100 (661)
T PHA02917 27 TRNQFKNNALHAYLFNEHCNNVEVVKLLL--DSGTNPLHK-NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN---I 100 (661)
T ss_pred ccCCCCCcHHHHHHHhhhcCcHHHHHHHH--HCCCCcccc-CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC---C
Confidence 3477899999997555 8899999999 789999877 899999999999999955 5577877652223 3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH--HhCChHHHHHHhhcCC-CCCCC---CCC---
Q 007858 110 QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA--LFGQSKMASFLYRQNE-DNLEP---DDL--- 180 (587)
Q Consensus 110 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~-~~~~~---~~g--- 180 (587)
.+ ..+++|.|+.+|+.++|++|+++|+++ +.+|.+|.||||.|+ ..|+.+++++|+++|+ ++..+ ..|
T Consensus 101 ~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadi-n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~ 177 (661)
T PHA02917 101 ND--FNIFSYMKSKNVDVDLIKVLVEHGFDL-SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAY 177 (661)
T ss_pred CC--cchHHHHHhhcCCHHHHHHHHHcCCCC-CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccc
Confidence 22 347788899999999999999999996 999999999999654 5789999999999998 55433 233
Q ss_pred --------chHHHHHHH-----------hCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCC-------cccCCC
Q 007858 181 --------ENTFFVSIE-----------TGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA-------FTSNCP 234 (587)
Q Consensus 181 --------~t~l~~a~~-----------~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~-------~~~~~~ 234 (587)
.||||+|+. .++.++++.|++. |++++.+|.+|.||||+|+..++. +..|..
T Consensus 178 ~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~--Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d 255 (661)
T PHA02917 178 DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINH--GIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGID 255 (661)
T ss_pred ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHC--CCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCCc
Confidence 599999986 4588999999998 999999999999999999998862 111110
Q ss_pred -----------CCccccchhhhhcc-CCCchHHHHHHHHHHHHhhccchh-------hh----h---hhccCCChHHHHH
Q 007858 235 -----------GWLKVPGIKFITNN-TDSSTQALELVKCLWKEISKSTHK-------DV----L---KLISKPSKLLFDA 288 (587)
Q Consensus 235 -----------~~~~~~~~~~~~~~-~~~~~~~~~~v~~Ll~~~~~~~~~-------~~----~---~~~~~g~t~Lh~A 288 (587)
|..+.+...++... .....-..++++.|++.|++.+.. .. . -....+.+++|.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 335 (661)
T PHA02917 256 NTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHIL 335 (661)
T ss_pred ccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHH
Confidence 00111111111111 111111468899999999753210 00 0 0111234454443
Q ss_pred H---HcCc--HHHHHHHHHhCCCc-----------------------------cccccCCCCchHHHHHHcC--------
Q 007858 289 A---HSGN--FKFLAVLTRSYPDL-----------------------------VHQLDENGRSIFHIAVMHR-------- 326 (587)
Q Consensus 289 a---~~g~--~~iv~~Ll~~~~~~-----------------------------~~~~d~~g~t~Lh~A~~~~-------- 326 (587)
. ..|. .++++.|+++|+++ ++..+.+|+||||.|++.+
T Consensus 336 ~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~ 415 (661)
T PHA02917 336 IEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYT 415 (661)
T ss_pred HHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhh
Confidence 3 3554 44777777776652 2233456999999987543
Q ss_pred ---------------ChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHh
Q 007858 327 ---------------HADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETI 391 (587)
Q Consensus 327 ---------------~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l 391 (587)
..+++++|+++|++++ .+|..|+||||+|+..++.++++.| +
T Consensus 416 ~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN----~kd~~G~TpLh~Aa~~~~~~~v~~L-------------------l 472 (661)
T PHA02917 416 YTYKKGLCDMSYACPILSTINICLPYLKDIN----MIDKRGETLLHKAVRYNKQSLVSLL-------------------L 472 (661)
T ss_pred hhhhhccchhhhhhhhHHHHHHHHHCCCCCC----CCCCCCcCHHHHHHHcCCHHHHHHH-------------------H
Confidence 2467899999999976 7999999999999998876655554 5
Q ss_pred cccccccccCCCCCCchhhhHH--hhhHHHH
Q 007858 392 VKPSFKEMKNNDGKTPWELFTD--EHKTLLE 420 (587)
Q Consensus 392 ~~~~~~~~~n~~g~t~l~~a~~--~~~~l~~ 420 (587)
.+|++++.+|..|+||+++|.. .+.++++
T Consensus 473 ~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~ 503 (661)
T PHA02917 473 ESGSDVNIRSNNGYTCIAIAINESRNIELLK 503 (661)
T ss_pred HCcCCCCCCCCCCCCHHHHHHHhCCCHHHHH
Confidence 5899999999999999999974 3445544
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=332.62 Aligned_cols=266 Identities=22% Similarity=0.250 Sum_probs=248.5
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHH-----HHhcCCHHHHHHHHHccCCCCccccCC
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHV-----ATGAKQTNFVKQMVELTGHDNLLSLQD 111 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~-----A~~~g~~~iv~~Ll~~~~~~~ll~~~d 111 (587)
..+..+.||||.|+..|+.++|+.|+ +.+.+++.. +..|.||||. |+..|+.+++++|++.| ++ ++..|
T Consensus 30 ~~~~~~~t~L~~A~~~~~~~ivk~Ll--~~g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g--a~-i~~~d 103 (480)
T PHA03100 30 YSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG--AN-VNAPD 103 (480)
T ss_pred hhhcccchhhhhhhccCCHHHHHHHH--HcCCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHHHHHHCC--CC-CCCCC
Confidence 45678899999999999999999999 678888877 8889999999 99999999999999999 88 79999
Q ss_pred CCCCcHHHHHH--HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC--ChHHHHHHhhcCC-CCCCCCCCchHHHH
Q 007858 112 ENGNTAFCFAA--AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG--QSKMASFLYRQNE-DNLEPDDLENTFFV 186 (587)
Q Consensus 112 ~~g~TpLh~Aa--~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~-~~~~~~~g~t~l~~ 186 (587)
..|.||||+|+ ..|+.+++++|+++|+++ +..+..|.||||+|+..| +.+++++|+++++ .+..+..|.||||.
T Consensus 104 ~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~ 182 (480)
T PHA03100 104 NNGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHI 182 (480)
T ss_pred CCCCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHH
Confidence 99999999999 999999999999999996 899999999999999999 9999999999999 88888899999999
Q ss_pred HHHhCcHHHHHHHHHhcccccccccccCC------chHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHH
Q 007858 187 SIETGLYGLALQLLKKNKKLLAGATHAKY------GTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVK 260 (587)
Q Consensus 187 a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g------~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 260 (587)
|+..|+.++++.|+++ ++.++..+..| .||||.|+..++. ..++++
T Consensus 183 A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~--------------------------~~~iv~ 234 (480)
T PHA03100 183 AVEKGNIDVIKFLLDN--GADINAGDIETLLFTIFETPLHIAACYNEI--------------------------TLEVVN 234 (480)
T ss_pred HHHhCCHHHHHHHHHc--CCCccCCCCCCCcHHHHHhHHHHHHHhCcC--------------------------cHHHHH
Confidence 9999999999999998 88888888888 9999999988741 178999
Q ss_pred HHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 261 CLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 261 ~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
+|++.|.+++..+ ..|.||||.|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+++.+++++|+++|++
T Consensus 235 ~Ll~~g~din~~d-----~~g~TpL~~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~ 308 (480)
T PHA03100 235 YLLSYGVPINIKD-----VYGFTPLHYAVYNNNPEFVKYLLDLGAN-PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 308 (480)
T ss_pred HHHHcCCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence 9999999888765 3789999999999999999999999998 799999999999999999999999999999999
Q ss_pred hhh
Q 007858 341 KEL 343 (587)
Q Consensus 341 ~~~ 343 (587)
++.
T Consensus 309 i~~ 311 (480)
T PHA03100 309 IKT 311 (480)
T ss_pred HHH
Confidence 874
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=327.99 Aligned_cols=265 Identities=14% Similarity=0.095 Sum_probs=242.4
Q ss_pred ccCCCChHhHHHHHcC---CHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC-CHHHHHHHHHccCCCCccccCCCC
Q 007858 38 QYSHKCVPLYKAALKG---DCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK-QTNFVKQMVELTGHDNLLSLQDEN 113 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g-~~~iv~~Ll~~~~~~~ll~~~d~~ 113 (587)
.+..|.||||.|+..| +.++++.|+ +.+++++.+ +..|.||||+|+..| +.+++++|++.| ++ ++.+|..
T Consensus 43 ~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll--~~Gadin~~-~~~g~TpLh~A~~~~~~~~iv~lLl~~g--a~-in~~~~~ 116 (471)
T PHA03095 43 RGEYGKTPLHLYLHYSSEKVKDIVRLLL--EAGADVNAP-ERCGFTPLHLYLYNATTLDVIKLLIKAG--AD-VNAKDKV 116 (471)
T ss_pred CCCCCCCHHHHHHHhcCCChHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHcCCcHHHHHHHHHcC--CC-CCCCCCC
Confidence 4567899999999999 999999999 789999988 889999999999999 599999999999 88 9999999
Q ss_pred CCcHHHHHH--HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC--ChHHHHHHhhcCC-CCCCCCCCchHHHHHH
Q 007858 114 GNTAFCFAA--AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG--QSKMASFLYRQNE-DNLEPDDLENTFFVSI 188 (587)
Q Consensus 114 g~TpLh~Aa--~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~ 188 (587)
|.||||+|+ ..++.+++++|+++|+++ +..|..|.||||+|+..+ +.+++++|++.++ .+..+..|.||||.++
T Consensus 117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad~-~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~ 195 (471)
T PHA03095 117 GRTPLHVYLSGFNINPKVIRLLLRKGADV-NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL 195 (471)
T ss_pred CCCHHHHHhhCCcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 999999999 556899999999999995 899999999999999876 5799999999998 6667899999999998
Q ss_pred Hh--CcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 189 ET--GLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 189 ~~--~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
.. +..++++.|++. +..++.+|..|.||||+|+..++. . ..+++.+++.|
T Consensus 196 ~~~~~~~~i~~~Ll~~--g~~~~~~d~~g~tpLh~Aa~~~~~-----~---------------------~~~v~~ll~~g 247 (471)
T PHA03095 196 QSFKPRARIVRELIRA--GCDPAATDMLGNTPLHSMATGSSC-----K---------------------RSLVLPLLIAG 247 (471)
T ss_pred HHCCCcHHHHHHHHHc--CCCCcccCCCCCCHHHHHHhcCCc-----h---------------------HHHHHHHHHcC
Confidence 75 678999999998 899999999999999999998741 1 46888999999
Q ss_pred hccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhh
Q 007858 267 SKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL 343 (587)
Q Consensus 267 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 343 (587)
.+++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+.+|+.++++.|++++++.+.
T Consensus 248 ~din~~d-----~~g~TpLh~A~~~~~~~~v~~LL~~gad-~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~ 318 (471)
T PHA03095 248 ISINARN-----RYGQTPLHYAAVFNNPRACRRLIALGAD-INAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET 318 (471)
T ss_pred CCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHH
Confidence 9888765 4889999999999999999999999999 799999999999999999999999999999998763
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=328.51 Aligned_cols=270 Identities=15% Similarity=0.112 Sum_probs=163.5
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
..+.||||.|+..|+.++|+.|+ +.+++++.. |.+|.||||+||..|+.+++++|++.+ .+ ... ..+.+|+|
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll--~~gadvn~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~~--~~-~~~--~~~~~~l~ 106 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLL--TRGHNVNQP-DHRDLTPLHIICKEPNKLGMKEMIRSI--NK-CSV--FYTLVAIK 106 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHCccHhHHHHHHHHH--hc-ccc--ccchhhHH
Confidence 35566677777777777676666 456666655 666667777777666666666666665 22 111 44566666
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC--ChHHHHHHhhcCC-CCCCCCC-CchHHHHHHHhCcHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG--QSKMASFLYRQNE-DNLEPDD-LENTFFVSIETGLYGL 195 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~-~~~~~~~-g~t~l~~a~~~~~~~~ 195 (587)
.|+..++.++++.|+..+.+... +.+ ...+......+ +.+++++|+++|+ .+..+.+ |.||||.|+..|+.++
T Consensus 107 ~a~~~~~~ei~~~Ll~~~~~~~~--~~~-~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~i 183 (477)
T PHA02878 107 DAFNNRNVEIFKIILTNRYKNIQ--TID-LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRL 183 (477)
T ss_pred HHHHcCCHHHHHHHHhCcccCcc--cCc-HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHH
Confidence 66666666666666665433100 000 01111111111 2346666666666 5555555 6677777777667777
Q ss_pred HHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhh
Q 007858 196 ALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL 275 (587)
Q Consensus 196 v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 275 (587)
++.|++. ++.++.+|..|.||||.|+..++ .++++.|++.|++++..+
T Consensus 184 v~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~----------------------------~~iv~~Ll~~ga~in~~d-- 231 (477)
T PHA02878 184 TELLLSY--GANVNIPDKTNNSPLHHAVKHYN----------------------------KPIVHILLENGASTDARD-- 231 (477)
T ss_pred HHHHHHC--CCCCCCcCCCCCCHHHHHHHhCC----------------------------HHHHHHHHHcCCCCCCCC--
Confidence 7766665 66666666667777777666665 666666766666665543
Q ss_pred hhccCCChHHHHHHHc-CcHHHHHHHHHhCCCccccccC-CCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCC
Q 007858 276 KLISKPSKLLFDAAHS-GNFKFLAVLTRSYPDLVHQLDE-NGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGN 353 (587)
Q Consensus 276 ~~~~~g~t~Lh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 353 (587)
..|.||||+|+.. ++.+++++|+++|++ ++..+. .|.||||+| .++.+++++|+++|++++ .+|.+|+
T Consensus 232 ---~~g~TpLh~A~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin----~~d~~g~ 301 (477)
T PHA02878 232 ---KCGNTPLHISVGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEYGADIN----SLNSYKL 301 (477)
T ss_pred ---CCCCCHHHHHHHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCC----CcCCCCC
Confidence 2566777766654 566677777766666 455553 566777766 355666677777666654 4666677
Q ss_pred cHHHHHHHc
Q 007858 354 NLLHLAAQY 362 (587)
Q Consensus 354 TpLhlA~~~ 362 (587)
||||+|+..
T Consensus 302 TpL~~A~~~ 310 (477)
T PHA02878 302 TPLSSAVKQ 310 (477)
T ss_pred CHHHHHHHH
Confidence 777776654
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=325.07 Aligned_cols=299 Identities=16% Similarity=0.108 Sum_probs=244.3
Q ss_pred hHHHHHcCCHHHHHHHHhhc---CccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 46 LYKAALKGDCNEAKRILGDD---HQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 46 L~~Aa~~g~~~~v~~Ll~~~---~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
|+.++...+.+.+...+ +. .+...+.. +..+.||||.|++.|+.++|++|+++| ++ ++.+|..|.||||+||
T Consensus 4 ~~~~~~~~~~~~i~~~i-~~~~~~~~~~~~~-~~~~~tPLh~A~~~g~~e~vk~Ll~~g--ad-vn~~d~~g~TpLh~A~ 78 (477)
T PHA02878 4 LYKSMYTDNYETILKYI-EYIDHTENYSTSA-SLIPFIPLHQAVEARNLDVVKSLLTRG--HN-VNQPDHRDLTPLHIIC 78 (477)
T ss_pred HHHHHHhccHHHHHHHH-HHHhhhhhhcCcc-cccCcchHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHH
Confidence 66777777765566665 22 11111222 456899999999999999999999999 88 9999999999999999
Q ss_pred HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHh--CcHHHHHHHH
Q 007858 123 AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIET--GLYGLALQLL 200 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~--~~~~~v~~Ll 200 (587)
..|+.++++.|++.+.+. .. ..+.+|++.|+..++.+++++|+..+.....+.+. ..+...... ...++++.|+
T Consensus 79 ~~g~~~~v~~Ll~~~~~~-~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~iv~~Ll 154 (477)
T PHA02878 79 KEPNKLGMKEMIRSINKC-SV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDL-VYIDKKSKDDIIEAEITKLLL 154 (477)
T ss_pred HCccHhHHHHHHHHHhcc-cc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcH-HHHhhccchhhHHHHHHHHHH
Confidence 999999999999987653 22 56789999999999999999999886411111111 111111111 2346999999
Q ss_pred HhcccccccccccC-CchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhcc
Q 007858 201 KKNKKLLAGATHAK-YGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLIS 279 (587)
Q Consensus 201 ~~~~~~~~~~~d~~-g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 279 (587)
++ |+.++..+.. |.||||+|+..++ .+++++|++.|++++..+ .
T Consensus 155 ~~--gadin~~~~~~g~tpLh~A~~~~~----------------------------~~iv~~Ll~~gad~n~~d-----~ 199 (477)
T PHA02878 155 SY--GADINMKDRHKGNTALHYATENKD----------------------------QRLTELLLSYGANVNIPD-----K 199 (477)
T ss_pred Hc--CCCCCccCCCCCCCHHHHHHhCCC----------------------------HHHHHHHHHCCCCCCCcC-----C
Confidence 97 8999999998 9999999999997 999999999999887655 4
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHc-CChhHHHHHHhcCcchhhhhhhccC-CCCcHHH
Q 007858 280 KPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH-RHADTFKLIYEMGFDKELIATYVDV-SGNNLLH 357 (587)
Q Consensus 280 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLh 357 (587)
.|.||||.|+..|+.++++.|++.|++ ++.+|..|+||||+|+.. ++.+++++|+++|++++ .++. .|.||||
T Consensus 200 ~g~tpLh~A~~~~~~~iv~~Ll~~ga~-in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn----~~~~~~g~TpLh 274 (477)
T PHA02878 200 TNNSPLHHAVKHYNKPIVHILLENGAS-TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN----AKSYILGLTALH 274 (477)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC----ccCCCCCCCHHH
Confidence 789999999999999999999999999 799999999999999986 78999999999999976 5665 8999999
Q ss_pred HHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhhHHh
Q 007858 358 LAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDE 414 (587)
Q Consensus 358 lA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~~~ 414 (587)
+|+ ++.++++.| +.+|++++.+|.+|+||+++|.+.
T Consensus 275 ~A~--~~~~~v~~L-------------------l~~gadin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 275 SSI--KSERKLKLL-------------------LEYGADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred HHc--cCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHH
Confidence 993 455555544 558999999999999999999764
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=310.59 Aligned_cols=246 Identities=15% Similarity=0.155 Sum_probs=167.8
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
+++||.|+..|+.++++.|+ +.+.+++.. +.+|.||||+|+..|+.+++++|++.| ++ ++..+..+.||||.|+
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll--~~g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~-~~~~~~~~~t~L~~A~ 76 (413)
T PHA02875 3 QVALCDAILFGELDIARRLL--DIGINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKHG--AI-PDVKYPDIESELHDAV 76 (413)
T ss_pred chHHHHHHHhCCHHHHHHHH--HCCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CC-ccccCCCcccHHHHHH
Confidence 45556666666666666555 445555544 445566666666666666666666555 44 4455555556666666
Q ss_pred HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 123 AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
..|+.++++.|++.|+......+.+|.||||+|+..|+.+++++|++.|+
T Consensus 77 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ga------------------------------ 126 (413)
T PHA02875 77 EEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGA------------------------------ 126 (413)
T ss_pred HCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCC------------------------------
Confidence 66666666666655555434445555555555555555555555555554
Q ss_pred cccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCC
Q 007858 203 NKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPS 282 (587)
Q Consensus 203 ~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 282 (587)
+++.++..|.||||+|+..++ .++++.|+++|++++..+ ..|.
T Consensus 127 ----d~~~~~~~g~tpLh~A~~~~~----------------------------~~~v~~Ll~~g~~~~~~d-----~~g~ 169 (413)
T PHA02875 127 ----DPDIPNTDKFSPLHLAVMMGD----------------------------IKGIELLIDHKACLDIED-----CCGC 169 (413)
T ss_pred ----CCCCCCCCCCCHHHHHHHcCC----------------------------HHHHHHHHhcCCCCCCCC-----CCCC
Confidence 455566667777777777665 677777777776665544 3678
Q ss_pred hHHHHHHHcCcHHHHHHHHHhCCCccccccCCC-CchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHH
Q 007858 283 KLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG-RSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ 361 (587)
Q Consensus 283 t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~ 361 (587)
||||.|+..|+.+++++|+++|++ ++..+.+| .||+|+|+..|+.+++++|+++|++++. .+..+.+|.|||++++.
T Consensus 170 TpL~~A~~~g~~eiv~~Ll~~ga~-~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~-~~~~~~~~~t~l~~~~~ 247 (413)
T PHA02875 170 TPLIIAMAKGDIAICKMLLDSGAN-IDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI-MFMIEGEECTILDMICN 247 (413)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCC-CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch-HhhcCCCchHHHHHHHh
Confidence 889999999999999999999999 67777776 5899999999999999999999999985 44578899999999876
Q ss_pred cC
Q 007858 362 YS 363 (587)
Q Consensus 362 ~~ 363 (587)
..
T Consensus 248 ~~ 249 (413)
T PHA02875 248 MC 249 (413)
T ss_pred hc
Confidence 54
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=317.48 Aligned_cols=275 Identities=16% Similarity=0.176 Sum_probs=230.5
Q ss_pred HcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhc--CCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcC---
Q 007858 51 LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGA--KQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVG--- 125 (587)
Q Consensus 51 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~--g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g--- 125 (587)
...+.++++.|+ ++|++++.. .+|.||||.++.. ++.++|++|+++| ++ ++.++ .+.||||.|+.++
T Consensus 12 ~~~~~~~v~~LL--~~GadvN~~--~~g~t~l~~~~~~~~~~~~iv~~Ll~~G--Ad-vn~~~-~~~tpL~~a~~~~~~~ 83 (494)
T PHA02989 12 DTVDKNALEFLL--RTGFDVNEE--YRGNSILLLYLKRKDVKIKIVKLLIDNG--AD-VNYKG-YIETPLCAVLRNREIT 83 (494)
T ss_pred CcCcHHHHHHHH--HcCCCcccc--cCCCCHHHHHHhcCCCChHHHHHHHHcC--CC-ccCCC-CCCCcHHHHHhccCcc
Confidence 357899999999 789999876 4688998876554 3789999999999 88 88776 5799999998754
Q ss_pred ---CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh---CChHHHHHHhhcCC-C-CCCCCCCchHHHHHHHh--CcHHH
Q 007858 126 ---SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF---GQSKMASFLYRQNE-D-NLEPDDLENTFFVSIET--GLYGL 195 (587)
Q Consensus 126 ---~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~-~-~~~~~~g~t~l~~a~~~--~~~~~ 195 (587)
+.+++++|+++|+++ +.+|.+|.||||.|+.. |+.+++++|+++|+ + +..+..|.||||.|+.. ++.++
T Consensus 84 ~~~~~~iv~~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~i 162 (494)
T PHA02989 84 SNKIKKIVKLLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDV 162 (494)
T ss_pred hhhHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHH
Confidence 578999999999996 99999999999988765 67899999999999 7 77899999999998765 57899
Q ss_pred HHHHHHhcccccccc-cccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhh
Q 007858 196 ALQLLKKNKKLLAGA-THAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDV 274 (587)
Q Consensus 196 v~~Ll~~~~~~~~~~-~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 274 (587)
++.|+++ |++++. .+..|.||||.|+..+.. ....+++++|+++|++++..+.
T Consensus 163 v~~Ll~~--Gadi~~~~~~~g~tpL~~a~~~~~~------------------------~~~~~iv~~Ll~~Ga~vn~~~~ 216 (494)
T PHA02989 163 IKILLSF--GVNLFEKTSLYGLTPMNIYLRNDID------------------------VISIKVIKYLIKKGVNIETNNN 216 (494)
T ss_pred HHHHHHc--CCCccccccccCCChHHHHHhcccc------------------------cccHHHHHHHHhCCCCccccCC
Confidence 9999998 777776 678899999998876410 0018999999999998887653
Q ss_pred hhhccCCChHHHHHHHcC------cHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhc
Q 007858 275 LKLISKPSKLLFDAAHSG------NFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYV 348 (587)
Q Consensus 275 ~~~~~~g~t~Lh~Aa~~g------~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~ 348 (587)
.|.+|+|.++..+ ..+++++|+. +++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+
T Consensus 217 -----~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~ad-vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin----~~ 285 (494)
T PHA02989 217 -----GSESVLESFLDNNKILSKKEFKVLNFILK-YIK-INKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIY----NV 285 (494)
T ss_pred -----ccccHHHHHHHhchhhcccchHHHHHHHh-CCC-CCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcc----cc
Confidence 6789999877643 5677776654 688 79999999999999999999999999999999976 69
Q ss_pred cCCCCcHHHHHHHcCCCCCCCCC
Q 007858 349 DVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 349 d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
|..|+||||+|+..++.++++.|
T Consensus 286 d~~G~TpL~~A~~~~~~~iv~~L 308 (494)
T PHA02989 286 SKDGDTVLTYAIKHGNIDMLNRI 308 (494)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999998777655
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=283.93 Aligned_cols=234 Identities=12% Similarity=0.097 Sum_probs=196.3
Q ss_pred cCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHH
Q 007858 52 KGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQ 131 (587)
Q Consensus 52 ~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~ 131 (587)
.++.+++++|+ +++.. .. |.+|.||||+|+..|+.++++.|++.+ ++ ++.++ |.||||+|+..|+.++++
T Consensus 9 ~~~~~~~~~Li--s~~a~--~~-D~~G~TpLh~Aa~~g~~eiv~~Ll~~g--a~-~n~~d--~~TpLh~Aa~~g~~eiV~ 78 (284)
T PHA02791 9 WKSKQLKSFLS--SKDAF--KA-DVHGHSALYYAIADNNVRLVCTLLNAG--AL-KNLLE--NEFPLHQAATLEDTKIVK 78 (284)
T ss_pred cCHHHHHHHHH--hCCCC--CC-CCCCCcHHHHHHHcCCHHHHHHHHHCc--CC-CcCCC--CCCHHHHHHHCCCHHHHH
Confidence 45678888888 45543 33 889999999999999999999999998 66 55553 789999999999999999
Q ss_pred HHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCC-chHHHHHHHhCcHHHHHHHHHhccccccc
Q 007858 132 FMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDL-ENTFFVSIETGLYGLALQLLKKNKKLLAG 209 (587)
Q Consensus 132 ~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g-~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~ 209 (587)
+|++.|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..| .||||.|+..|+.++++.|+++ .+..
T Consensus 79 lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~-~~~~-- 154 (284)
T PHA02791 79 ILLFSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPST-- 154 (284)
T ss_pred HHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc-CCcc--
Confidence 999999996 8899999999999999999999999999998 66677777 5899999999999999999987 3322
Q ss_pred ccc-cCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChH-HHH
Q 007858 210 ATH-AKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKL-LFD 287 (587)
Q Consensus 210 ~~d-~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~-Lh~ 287 (587)
.| ..|.||||+|+..|+ .++++.|+++|++++.++. .|.|| ||+
T Consensus 155 -~d~~~g~TpLh~Aa~~g~----------------------------~eiv~lLL~~gAd~n~~d~-----~g~t~~L~~ 200 (284)
T PHA02791 155 -FDLAILLSCIHITIKNGH----------------------------VDMMILLLDYMTSTNTNNS-----LLFIPDIKL 200 (284)
T ss_pred -cccccCccHHHHHHHcCC----------------------------HHHHHHHHHCCCCCCcccC-----CCCChHHHH
Confidence 23 358899999999997 8999999999998876543 56665 999
Q ss_pred HHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcch
Q 007858 288 AAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDK 341 (587)
Q Consensus 288 Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 341 (587)
|+..|+.+++++|+++|++ ++.+|.+| ++| ++.|++++|+++-++.
T Consensus 201 Aa~~~~~e~v~lLl~~Ga~-in~~~~~~-~~l------~~~e~~~~ll~~~~~~ 246 (284)
T PHA02791 201 AIDNKDLEMLQALFKYDIN-IYSVNLEN-VLL------DDAEIAKMIIEKHVEY 246 (284)
T ss_pred HHHcCCHHHHHHHHHCCCC-CccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence 9999999999999999999 68888854 665 8889999999887654
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=252.97 Aligned_cols=127 Identities=19% Similarity=0.169 Sum_probs=116.0
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
+.++.+.+++......++.++ +..+..++.+.|.+|+||||+||..|+.++|++|++.. +.. ++.+|..|+||||+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~-~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~-nv~-~ddkDdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELI-QSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQP-NVK-PDDKDDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHH-hcChhhhhccccccCCceeeeeeecCchhHHHHHHhcC-CCC-CCCccccCCchhhhh
Confidence 467788899999999999999 78888889887779999999999999999999999743 466 888999999999999
Q ss_pred HHcCCHHHHHHHHhc-CCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 122 AAVGSVEIAQFMLQR-NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~-~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|..|+.++|+.|+.+ |+++ +..++.|.||||||+..|+.|++++|+++++
T Consensus 80 ~s~g~~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r~eIaqlLle~ga 130 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEKGA 130 (226)
T ss_pred hhcCcHHHHHHHhcCCCCCc-ceecCCCcceehhhhcCChhhHHHHHHhcCC
Confidence 999999999999999 9996 9999999999999999999999999998876
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=302.95 Aligned_cols=249 Identities=13% Similarity=0.156 Sum_probs=193.6
Q ss_pred ccccceeecCCCCCCCCCCcCCCCc---ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC
Q 007858 13 QQEISISITGRDPANSVQPLQNDKK---QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK 89 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g 89 (587)
|..+..++...+.+....+++.+.+ .+..|.||||.|+..|+.++++.|+ +.+++++.. +.++.||||.|+..|
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll--~~ga~~~~~-~~~~~t~L~~A~~~g 79 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLM--KHGAIPDVK-YPDIESELHDAVEEG 79 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH--hCCCCcccc-CCCcccHHHHHHHCC
Confidence 4455666666666666666666543 3458999999999999999999999 678877766 788999999999999
Q ss_pred CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhh
Q 007858 90 QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169 (587)
Q Consensus 90 ~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (587)
+.++|++|++.+ .+..+..+.+|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~v~~Ll~~~--~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~ 156 (413)
T PHA02875 80 DVKAVEELLDLG--KFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLID 156 (413)
T ss_pred CHHHHHHHHHcC--CcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999998 5534566788999999999999999999999999995 8999999999999999999999999999
Q ss_pred cCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhcc
Q 007858 170 QNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNN 248 (587)
Q Consensus 170 ~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
+++ .+. +|..|.||||+|+..|+
T Consensus 157 ~g~~~~~-----------------------------------~d~~g~TpL~~A~~~g~--------------------- 180 (413)
T PHA02875 157 HKACLDI-----------------------------------EDCCGCTPLIIAMAKGD--------------------- 180 (413)
T ss_pred cCCCCCC-----------------------------------CCCCCCCHHHHHHHcCC---------------------
Confidence 886 444 44455555555555554
Q ss_pred CCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccc---cCCCCchHHHHHHc
Q 007858 249 TDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQL---DENGRSIFHIAVMH 325 (587)
Q Consensus 249 ~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~---d~~g~t~Lh~A~~~ 325 (587)
.+++++|++.|++++..+. ..+.||+|+|+..|+.+++++|+++|++ ++.. +..+.||++.+...
T Consensus 181 -------~eiv~~Ll~~ga~~n~~~~----~~~~t~l~~A~~~~~~~iv~~Ll~~gad-~n~~~~~~~~~~t~l~~~~~~ 248 (413)
T PHA02875 181 -------IAICKMLLDSGANIDYFGK----NGCVAALCYAIENNKIDIVRLFIKRGAD-CNIMFMIEGEECTILDMICNM 248 (413)
T ss_pred -------HHHHHHHHhCCCCCCcCCC----CCCchHHHHHHHcCCHHHHHHHHHCCcC-cchHhhcCCCchHHHHHHHhh
Confidence 5555555555555544332 1225788888888888999999999888 4543 67788999987653
Q ss_pred ---CChhHHHHHH
Q 007858 326 ---RHADTFKLIY 335 (587)
Q Consensus 326 ---~~~~iv~~Ll 335 (587)
...+.++.++
T Consensus 249 ~~~~~~~~~~~li 261 (413)
T PHA02875 249 CTNLESEAIDALI 261 (413)
T ss_pred cCCcccHHHHHHH
Confidence 3445666555
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=283.36 Aligned_cols=219 Identities=13% Similarity=0.129 Sum_probs=196.4
Q ss_pred cCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHH
Q 007858 88 AKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167 (587)
Q Consensus 88 ~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (587)
.++.+++++|++++ .+.+|.+|.||||+|+..|+.+++++|++.|+++ +.. +|.||||+|+..|+.+++++|
T Consensus 9 ~~~~~~~~~Lis~~-----a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~~eiV~lL 80 (284)
T PHA02791 9 WKSKQLKSFLSSKD-----AFKADVHGHSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKIL 80 (284)
T ss_pred cCHHHHHHHHHhCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCCHHHHHHH
Confidence 56789999999988 3568999999999999999999999999999985 544 478999999999999999999
Q ss_pred hhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCC-chHHHHHhhCCCCcccCCCCCccccchhhh
Q 007858 168 YRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKY-GTAMHMLARNPSAFTSNCPGWLKVPGIKFI 245 (587)
Q Consensus 168 l~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g-~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
++.++ .+..|..|.||||+|+..|+.++++.|++. +...+.++..| .||||+|+..++
T Consensus 81 L~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~--gadin~~~~~g~~TpL~~Aa~~g~------------------ 140 (284)
T PHA02791 81 LFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK--NWRLMFYGKTGWKTSFYHAVMLND------------------ 140 (284)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcCccCCCCCcHHHHHHHHcCC------------------
Confidence 99998 888999999999999999999999999998 77778888888 599999999997
Q ss_pred hccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCch-HHHHHH
Q 007858 246 TNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSI-FHIAVM 324 (587)
Q Consensus 246 ~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~ 324 (587)
.+++++|++++.+.... ..|.||||+|+..|+.++++.|+++|++ ++.+|..|.|| ||+|+.
T Consensus 141 ----------~eivk~LL~~~~~~~d~------~~g~TpLh~Aa~~g~~eiv~lLL~~gAd-~n~~d~~g~t~~L~~Aa~ 203 (284)
T PHA02791 141 ----------VSIVSYFLSEIPSTFDL------AILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAID 203 (284)
T ss_pred ----------HHHHHHHHhcCCccccc------ccCccHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCChHHHHHHH
Confidence 99999999986543211 2469999999999999999999999999 69999999987 999999
Q ss_pred cCChhHHHHHHhcCcchhhhhhhccCCCCcHH
Q 007858 325 HRHADTFKLIYEMGFDKELIATYVDVSGNNLL 356 (587)
Q Consensus 325 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 356 (587)
+|+.+++++|+++|++++ ++|.+| |||
T Consensus 204 ~~~~e~v~lLl~~Ga~in----~~~~~~-~~l 230 (284)
T PHA02791 204 NKDLEMLQALFKYDINIY----SVNLEN-VLL 230 (284)
T ss_pred cCCHHHHHHHHHCCCCCc----cCcccC-ccC
Confidence 999999999999999975 788855 666
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=329.16 Aligned_cols=343 Identities=20% Similarity=0.232 Sum_probs=249.2
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCC----
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDE---- 112 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~---- 112 (587)
..+..|-||||.|+..|+.+++.+++ .+++.++.. +-.|.||+|.|+..+..+++++|+++| ++ +..++.
T Consensus 237 a~d~~gl~~lh~a~~~g~~~i~~~l~--~~ga~~~~~-~vr~~tplh~AA~~~~~e~~~~ll~~g--a~-~~~~~~~~kt 310 (1143)
T KOG4177|consen 237 AKDESGLTPLHVAAFMGHLDIVKLLL--QHGASVNVS-TVRGETPLHMAARAGQVEVCKLLLQNG--AD-VLAKARDDQT 310 (1143)
T ss_pred cccccCccHHHHHHhccchhHHHHHH--hcccccCcc-cccccCcchhhhccchhhhHhhhhccC--cc-cccccccccC
Confidence 45778899999999999999999998 778888877 888999999999999999999999887 33 333333
Q ss_pred -----------------------------CCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHH
Q 007858 113 -----------------------------NGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKM 163 (587)
Q Consensus 113 -----------------------------~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~ 163 (587)
.|.||||+++..++.+++..|.+.++.- ......|.||+|.|+..|..++
T Consensus 311 ~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~-~~a~~k~~~pl~la~~~g~~~~ 389 (1143)
T KOG4177|consen 311 PLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQR-RQAEEKGFTPLHLAVKSGRVSV 389 (1143)
T ss_pred hhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhcccccc-CcccccCCcchhhhcccCchhH
Confidence 4444444444444444444444444432 4455667778888888888888
Q ss_pred HHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC-C------ccc----
Q 007858 164 ASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS-A------FTS---- 231 (587)
Q Consensus 164 v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~-~------~~~---- 231 (587)
+++++..+. ++..++.|.||+|.+...++.++++.++++ ++..+..+..|.||+|.|+..+. . +..
T Consensus 390 v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~--gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~ 467 (1143)
T KOG4177|consen 390 VELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKR--GASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADP 467 (1143)
T ss_pred HHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEecc--CCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCc
Confidence 888887777 777777777777777777777777777776 67777777777777777777662 1 000
Q ss_pred ---CCCCCccccc---------hhhhhcc--------C----CCc----hHHHHHHHHHHHHhhccchhhhhhhccCCCh
Q 007858 232 ---NCPGWLKVPG---------IKFITNN--------T----DSS----TQALELVKCLWKEISKSTHKDVLKLISKPSK 283 (587)
Q Consensus 232 ---~~~~~~~~~~---------~~~~~~~--------~----~~~----~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t 283 (587)
...|+.+++. ...+.+. + ..| ......++.++++|++++..+. .|+|
T Consensus 468 n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~-----r~~T 542 (1143)
T KOG4177|consen 468 NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTG-----RGYT 542 (1143)
T ss_pred chhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcc-----cccc
Confidence 0113332210 0000000 0 001 1125566777777777776554 7789
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC
Q 007858 284 LLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS 363 (587)
Q Consensus 284 ~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~ 363 (587)
|||.|+.+|+.++|++||++++| ++.+|+.|+||||.|+..|+.+++++|+++|+++| +.|.+|.||||.|+..|
T Consensus 543 pLh~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn----a~d~~g~TpL~iA~~lg 617 (1143)
T KOG4177|consen 543 PLHVAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVN----AADLDGFTPLHIAVRLG 617 (1143)
T ss_pred hHHHHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCC----cccccCcchhHHHHHhc
Confidence 99999999999999999999999 78999999999999999999999999999999976 79999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHhhhHHHHHHhccccc-----ccccCCCCCCchhhhHHhhhH
Q 007858 364 NPKPISKVPGAALEMQQELKTFKEVETIVKPSF-----KEMKNNDGKTPWELFTDEHKT 417 (587)
Q Consensus 364 ~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~-----~~~~n~~g~t~l~~a~~~~~~ 417 (587)
+.++++.+ ...++. ....+.+|.+|.++..+...+
T Consensus 618 ~~~~~k~l-------------------~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~~ 657 (1143)
T KOG4177|consen 618 YLSVVKLL-------------------KVVTATPAATDPVKENRKGAVPEDVAEELDTD 657 (1143)
T ss_pred ccchhhHH-------------------HhccCccccccchhhhhcccChhhHHHHhhhh
Confidence 98887766 444444 777888999999998776544
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=327.27 Aligned_cols=283 Identities=21% Similarity=0.207 Sum_probs=209.5
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
+..+.||+|.|+..|+.+.++.++ +.+.+++.+ +..|.||||.|+..++..+|+.+++++ ++ .+.++..|.||+
T Consensus 371 ~~k~~~pl~la~~~g~~~~v~Lll--~~ga~~~~~-gk~gvTplh~aa~~~~~~~v~l~l~~g--A~-~~~~~~lG~T~l 444 (1143)
T KOG4177|consen 371 EEKGFTPLHLAVKSGRVSVVELLL--EAGADPNSA-GKNGVTPLHVAAHYGNPRVVKLLLKRG--AS-PNAKAKLGYTPL 444 (1143)
T ss_pred cccCCcchhhhcccCchhHHHhhh--hccCCcccC-CCCCcceeeehhhccCcceEEEEeccC--CC-hhhHhhcCCChh
Confidence 445556666666666666665555 445555554 555666666666666666666666655 55 556666666666
Q ss_pred HHHHHcC-CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 119 CFAAAVG-SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 119 h~Aa~~g-~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
|+|+..| ..+++..+++.+.+. +..-+.|.||||.|+..|+.++++.|++.++ .+...+.+.+++|.+...+...++
T Consensus 445 hvaa~~g~~~~~~~~l~~~g~~~-n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~ 523 (1143)
T KOG4177|consen 445 HVAAKKGRYLQIARLLLQYGADP-NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVA 523 (1143)
T ss_pred hhhhhcccHhhhhhhHhhcCCCc-chhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHH
Confidence 6666666 566666666666663 6666666666666666666666666666665 555556666666666666666666
Q ss_pred HHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh
Q 007858 197 LQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK 276 (587)
Q Consensus 197 ~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 276 (587)
+.++++ +...+.++..|+||||.|+.+|+ ..+|++|+++|++++.++.
T Consensus 524 ~~l~~~--ga~v~~~~~r~~TpLh~A~~~g~----------------------------v~~VkfLLe~gAdv~ak~~-- 571 (1143)
T KOG4177|consen 524 KILLEH--GANVDLRTGRGYTPLHVAVHYGN----------------------------VDLVKFLLEHGADVNAKDK-- 571 (1143)
T ss_pred HHHhhc--CCceehhcccccchHHHHHhcCC----------------------------chHHHHhhhCCccccccCC--
Confidence 666665 77778888999999999999998 9999999999999998774
Q ss_pred hccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhh-hhhhccCCCCcH
Q 007858 277 LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL-IATYVDVSGNNL 355 (587)
Q Consensus 277 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~-~~~~~d~~G~Tp 355 (587)
.|+||||.||..|+.+++.+|+++|++ +|..|.+|.||||+|+..|+.+++++|+..+.+..- -....+..|+||
T Consensus 572 ---~G~TPLH~Aa~~G~~~i~~LLlk~GA~-vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p 647 (1143)
T KOG4177|consen 572 ---LGYTPLHQAAQQGHNDIAELLLKHGAS-VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVP 647 (1143)
T ss_pred ---CCCChhhHHHHcChHHHHHHHHHcCCC-CCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccCh
Confidence 889999999999999999999999999 799999999999999999999999999999988210 012578899999
Q ss_pred HHHHHHcCC
Q 007858 356 LHLAAQYSN 364 (587)
Q Consensus 356 LhlA~~~~~ 364 (587)
..++-....
T Consensus 648 ~~v~e~~~~ 656 (1143)
T KOG4177|consen 648 EDVAEELDT 656 (1143)
T ss_pred hhHHHHhhh
Confidence 998877644
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=304.33 Aligned_cols=275 Identities=13% Similarity=0.123 Sum_probs=230.6
Q ss_pred CCcCCCCccc--CCCChHhHHHHHcC--CHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC------CHHHHHHHHH
Q 007858 30 QPLQNDKKQY--SHKCVPLYKAALKG--DCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK------QTNFVKQMVE 99 (587)
Q Consensus 30 ~~l~~~~~~~--~~~~t~L~~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g------~~~iv~~Ll~ 99 (587)
.+++.+.+.+ ..|.|+||.++..+ +.++|+.|+ ++|++++.+ + .+.||||.|+..+ +.++|++|++
T Consensus 21 ~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll--~~GAdvn~~-~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~ 96 (494)
T PHA02989 21 FLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLI--DNGADVNYK-G-YIETPLCAVLRNREITSNKIKKIVKLLLK 96 (494)
T ss_pred HHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHH--HcCCCccCC-C-CCCCcHHHHHhccCcchhhHHHHHHHHHH
Confidence 3456665444 45889988765543 689999999 789999876 4 5799999998754 5789999999
Q ss_pred ccCCCCccccCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh--CChHHHHHHhhcCC-C
Q 007858 100 LTGHDNLLSLQDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF--GQSKMASFLYRQNE-D 173 (587)
Q Consensus 100 ~~~~~~ll~~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~--g~~~~v~~Ll~~~~-~ 173 (587)
+| ++ ++.+|..|.||||.|+.. |+.+++++|+++|+++.+.+|..|.||||+|+.. ++.+++++|+++|+ +
T Consensus 97 ~G--ad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 97 FG--AD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred CC--CC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 99 99 999999999999988765 6899999999999995478999999999998765 58899999999998 5
Q ss_pred CC-CCCCCchHHHHHHHhC----cHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhcc
Q 007858 174 NL-EPDDLENTFFVSIETG----LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNN 248 (587)
Q Consensus 174 ~~-~~~~g~t~l~~a~~~~----~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
+. .+..|.||||.|+..+ +.++++.|+++ |+.++.+|..|.||||.++..+.....
T Consensus 174 ~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~--Ga~vn~~~~~~~t~l~~~~~~~~~~~~----------------- 234 (494)
T PHA02989 174 FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK--GVNIETNNNGSESVLESFLDNNKILSK----------------- 234 (494)
T ss_pred cccccccCCChHHHHHhcccccccHHHHHHHHhC--CCCccccCCccccHHHHHHHhchhhcc-----------------
Confidence 55 6788999999998764 89999999998 888999999999999988765421000
Q ss_pred CCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCCh
Q 007858 249 TDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHA 328 (587)
Q Consensus 249 ~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~ 328 (587)
...++++++++ +++++.++ ..|.||||.|+..|+.+++++|+++|+| ++.+|..|+||||+|+..|+.
T Consensus 235 -----~~~~il~~l~~-~advn~~d-----~~G~TpL~~Aa~~~~~~~v~~LL~~Gad-in~~d~~G~TpL~~A~~~~~~ 302 (494)
T PHA02989 235 -----KEFKVLNFILK-YIKINKKD-----KKGFNPLLISAKVDNYEAFNYLLKLGDD-IYNVSKDGDTVLTYAIKHGNI 302 (494)
T ss_pred -----cchHHHHHHHh-CCCCCCCC-----CCCCCHHHHHHHhcCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCH
Confidence 01567776654 57777655 4899999999999999999999999999 799999999999999999999
Q ss_pred hHHHHHHhcCcchh
Q 007858 329 DTFKLIYEMGFDKE 342 (587)
Q Consensus 329 ~iv~~Ll~~g~~~~ 342 (587)
++++.|+++++..+
T Consensus 303 ~iv~~LL~~~p~~~ 316 (494)
T PHA02989 303 DMLNRILQLKPGKY 316 (494)
T ss_pred HHHHHHHhcCCChH
Confidence 99999999876543
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=307.49 Aligned_cols=326 Identities=13% Similarity=0.131 Sum_probs=238.5
Q ss_pred CCCcCCCC---cccCCCChHhHHHHHcCCHHH----HHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHcc
Q 007858 29 VQPLQNDK---KQYSHKCVPLYKAALKGDCNE----AKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELT 101 (587)
Q Consensus 29 ~~~l~~~~---~~~~~~~t~L~~Aa~~g~~~~----v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~ 101 (587)
..+++.+. ..+..|+||||.|+..|+.++ ++.|+ +..+ ..+.. +..+++|.|+..|+.++|++|+++|
T Consensus 52 ~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll-~~~~-~~n~~---~~~~~~~~a~~~~~~e~vk~Ll~~G 126 (661)
T PHA02917 52 KLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALL-EATG-YSNIN---DFNIFSYMKSKNVDVDLIKVLVEHG 126 (661)
T ss_pred HHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHH-hccC-CCCCC---CcchHHHHHhhcCCHHHHHHHHHcC
Confidence 33445543 346788999999999998654 56676 3323 22221 2347788899999999999999999
Q ss_pred CCCCccccCCCCCCcHHHHHH--HcCCHHHHHHHHhcCCcccccCCC---CC-----------CcHHHHHHH--------
Q 007858 102 GHDNLLSLQDENGNTAFCFAA--AVGSVEIAQFMLQRNPNLLTIRGG---GQ-----------MTPLYIAAL-------- 157 (587)
Q Consensus 102 ~~~~ll~~~d~~g~TpLh~Aa--~~g~~~iv~~Ll~~~~~l~~~~~~---~g-----------~tpL~~A~~-------- 157 (587)
++ ++.+|..|.||||.|+ ..|+.+++++|+++|+++ +.+|. .| .||||+|+.
T Consensus 127 --ad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 202 (661)
T PHA02917 127 --FD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESD 202 (661)
T ss_pred --CC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhccccccc
Confidence 99 9999999999999654 578999999999999996 54443 33 599999986
Q ss_pred ---hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcH--HHHHHHHHhcccccc----cccccCCchHHHHHhhCC-
Q 007858 158 ---FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLY--GLALQLLKKNKKLLA----GATHAKYGTAMHMLARNP- 226 (587)
Q Consensus 158 ---~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~--~~v~~Ll~~~~~~~~----~~~d~~g~t~Lh~a~~~~- 226 (587)
.++.+++++|+++|+ ++..|.+|.||||.|+.+|+. ++++.|++ +... ...|..|.+|+|+++.-+
T Consensus 203 ~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~---g~d~~~~~~~~~~~~~~~~~~a~yl~~ 279 (661)
T PHA02917 203 TRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK---GIDNTAYSYIDDLTCCTRGIMADYLNS 279 (661)
T ss_pred ccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh---CCcccccccccCcccccchHHHHHHHh
Confidence 468999999999999 888999999999999999985 79999874 3332 246777888888888311
Q ss_pred --------CC------cccCCC-CCccc------c---chhhhhccCC-------------CchHHHHHHHHHHHHhhcc
Q 007858 227 --------SA------FTSNCP-GWLKV------P---GIKFITNNTD-------------SSTQALELVKCLWKEISKS 269 (587)
Q Consensus 227 --------~~------~~~~~~-~~~~~------~---~~~~~~~~~~-------------~~~~~~~~v~~Ll~~~~~~ 269 (587)
+. ...|.. +...+ . .++.+.+... ......+++++|++.|+++
T Consensus 280 ~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdv 359 (661)
T PHA02917 280 DYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVV 359 (661)
T ss_pred hccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCC
Confidence 10 011211 11110 0 1111111000 0001256889999998877
Q ss_pred chhhh-------------------------hhhccCCChHHHHHHHcC-----------------------cHHHHHHHH
Q 007858 270 THKDV-------------------------LKLISKPSKLLFDAAHSG-----------------------NFKFLAVLT 301 (587)
Q Consensus 270 ~~~~~-------------------------~~~~~~g~t~Lh~Aa~~g-----------------------~~~iv~~Ll 301 (587)
+..+. ...+.+|.||||.|++.+ ..++++.|+
T Consensus 360 n~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll 439 (661)
T PHA02917 360 NKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICL 439 (661)
T ss_pred CCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHH
Confidence 65421 122346999999998543 356789999
Q ss_pred HhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHH-cCCCCCCCCC
Q 007858 302 RSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ-YSNPKPISKV 371 (587)
Q Consensus 302 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~-~~~~~~~~~l 371 (587)
++|++ ++.+|..|+||||+|+..++.+++++|+++|++++ .+|..|+||||+|+. .++.++++.+
T Consensus 440 ~~GAd-IN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin----~~d~~G~T~L~~A~~~~~~~~iv~~L 505 (661)
T PHA02917 440 PYLKD-INMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVN----IRSNNGYTCIAIAINESRNIELLKML 505 (661)
T ss_pred HCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCC----CCCCCCCCHHHHHHHhCCCHHHHHHH
Confidence 99999 79999999999999999999999999999999976 799999999999996 5666665554
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=277.08 Aligned_cols=182 Identities=19% Similarity=0.191 Sum_probs=165.4
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhh-------cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccC
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAA-------VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQ 110 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-------~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~ 110 (587)
...+|.|||.+||++|+.++|++|+ +..++++... .+-.|.+||-.|+..||.++|+.|++++ ++ +|..
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLl-e~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g--a~-VN~t 113 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLL-EHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG--AS-VNDT 113 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHH-HHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc--Cc-cccc
Confidence 4568899999999999999999999 6666655432 1346889999999999999999999999 88 9998
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHH
Q 007858 111 DENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIE 189 (587)
Q Consensus 111 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~ 189 (587)
.....|||-.||.-|+.|+|++|+++|+|. ++.|+.|.|.||+||.+||.+++++|++.++ ++.++..|+|+||.|++
T Consensus 114 T~TNStPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caE 192 (615)
T KOG0508|consen 114 TRTNSTPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAE 192 (615)
T ss_pred cccCCccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhh
Confidence 888899999999999999999999999995 9999999999999999999999999999999 88999999999999999
Q ss_pred hCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 190 TGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 190 ~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.|+.|+++.|+.+ ++.. .+|..|.|||..|+..|+
T Consensus 193 sG~vdivq~Ll~~--ga~i-~~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 193 SGSVDIVQLLLKH--GAKI-DVDGHGMTPLLLAAVTGH 227 (615)
T ss_pred cccHHHHHHHHhC--Ccee-eecCCCCchHHHHhhhcc
Confidence 9999999999998 5554 456779999999999997
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=301.57 Aligned_cols=272 Identities=15% Similarity=0.194 Sum_probs=189.8
Q ss_pred CHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHh--cCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc-----CC
Q 007858 54 DCNEAKRILGDDHQSMLRAAVTKGYQTILHVATG--AKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV-----GS 126 (587)
Q Consensus 54 ~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~-----g~ 126 (587)
+.+.|+.|+ + . .+++.. ..|.|+++.+.. .++.++|++|+++| ++ ++.+|..|.||||.|+.+ ++
T Consensus 17 ~~~~v~~ll-~-~-~~~~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~G--ad-vn~~d~~g~TpL~~~~~n~~~~~~~ 88 (489)
T PHA02798 17 KLSTVKLLI-K-S-CNPNEI--VNEYSIFQKYLQRDSPSTDIVKLFINLG--AN-VNGLDNEYSTPLCTILSNIKDYKHM 88 (489)
T ss_pred cHHHHHHHH-h-c-CChhhh--cccchHHHHHHhCCCCCHHHHHHHHHCC--CC-CCCCCCCCCChHHHHHHhHHhHHhH
Confidence 356777777 3 2 233332 345566653333 34678888888887 77 777788888888877654 56
Q ss_pred HHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC---ChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc---HHHHHHH
Q 007858 127 VEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG---QSKMASFLYRQNE-DNLEPDDLENTFFVSIETGL---YGLALQL 199 (587)
Q Consensus 127 ~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g---~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~---~~~v~~L 199 (587)
.+++++|+++|+++ +.+|.+|.||||+|+..+ +.+++++|+++|+ ++..|.+|.||||.|+..++ .++++.|
T Consensus 89 ~~iv~~Ll~~Gadi-N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 89 LDIVKILIENGADI-NKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred HHHHHHHHHCCCCC-CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHH
Confidence 77888888888885 777778888888887765 5678888888877 77777888888888887776 7788888
Q ss_pred HHhcccccccccc-cCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhc
Q 007858 200 LKKNKKLLAGATH-AKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLI 278 (587)
Q Consensus 200 l~~~~~~~~~~~d-~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 278 (587)
++. |.+++..+ ..|.||||.++..+.. .. ..+++++|+++|++++..+.
T Consensus 168 l~~--gadin~~~~~~~~t~Lh~~~~~~~~---~~---------------------~~~ivk~Li~~Ga~i~~~~~---- 217 (489)
T PHA02798 168 LEK--GVDINTHNNKEKYDTLHCYFKYNID---RI---------------------DADILKLFVDNGFIINKENK---- 217 (489)
T ss_pred HHh--CCCcccccCcCCCcHHHHHHHhccc---cC---------------------CHHHHHHHHHCCCCcccCCc----
Confidence 876 66666553 4677888877654310 00 16788888888877765432
Q ss_pred cCCChHHH-------HHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCC
Q 007858 279 SKPSKLLF-------DAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVS 351 (587)
Q Consensus 279 ~~g~t~Lh-------~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~ 351 (587)
.|.++++ .+...++.++++.|+. ++| ++.+|..|+||||+|+.+|+.+++++|+++|++++ .+|..
T Consensus 218 -~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~d-vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin----~~d~~ 290 (489)
T PHA02798 218 -SHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YID-INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDIN----IITEL 290 (489)
T ss_pred -cccchHHHHHHHHHhhcccchHHHHHHHHh-cCC-CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccc----ccCCC
Confidence 4455544 2344566777776654 466 68888888888888888888888888888888865 58888
Q ss_pred CCcHHHHHHHcCCCCCCCCC
Q 007858 352 GNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 352 G~TpLhlA~~~~~~~~~~~l 371 (587)
|+||||+|+..++.++++.+
T Consensus 291 G~TpL~~A~~~~~~~iv~~l 310 (489)
T PHA02798 291 GNTCLFTAFENESKFIFNSI 310 (489)
T ss_pred CCcHHHHHHHcCcHHHHHHH
Confidence 88888888888776655544
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=297.54 Aligned_cols=260 Identities=13% Similarity=0.127 Sum_probs=226.0
Q ss_pred CCCChHhHHHH--HcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhc-----CCHHHHHHHHHccCCCCccccCCC
Q 007858 40 SHKCVPLYKAA--LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGA-----KQTNFVKQMVELTGHDNLLSLQDE 112 (587)
Q Consensus 40 ~~~~t~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~-----g~~~iv~~Ll~~~~~~~ll~~~d~ 112 (587)
..+.|+++.+. ..++.++|+.|+ ++|++++.. +..|.||||.|+.. ++.+++++|+++| ++ ++.+|.
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll--~~Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G--ad-iN~~d~ 107 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFI--NLGANVNGL-DNEYSTPLCTILSNIKDYKHMLDIVKILIENG--AD-INKKNS 107 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHH--HCCCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHHHHHHHCC--CC-CCCCCC
Confidence 45778766444 445899999999 789999987 89999999999864 6799999999999 99 999999
Q ss_pred CCCcHHHHHHHcC---CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCC---hHHHHHHhhcCC-CCCC-CCCCchHH
Q 007858 113 NGNTAFCFAAAVG---SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ---SKMASFLYRQNE-DNLE-PDDLENTF 184 (587)
Q Consensus 113 ~g~TpLh~Aa~~g---~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~---~~~v~~Ll~~~~-~~~~-~~~g~t~l 184 (587)
.|.||||+|+.++ +.+++++|+++|+++ +.+|.+|.||||+|++.++ .+++++|++.|+ .+.. +..|.||+
T Consensus 108 ~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~L 186 (489)
T PHA02798 108 DGETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTL 186 (489)
T ss_pred CcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHH
Confidence 9999999999986 789999999999996 9999999999999999998 999999999998 6555 45789999
Q ss_pred HHHHHh----CcHHHHHHHHHhcccccccccccCCchHHHH-------HhhCCCCcccCCCCCccccchhhhhccCCCch
Q 007858 185 FVSIET----GLYGLALQLLKKNKKLLAGATHAKYGTAMHM-------LARNPSAFTSNCPGWLKVPGIKFITNNTDSST 253 (587)
Q Consensus 185 ~~a~~~----~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~-------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (587)
|.++.. ++.++++.|+++ |..++..+..|.++++. +...++
T Consensus 187 h~~~~~~~~~~~~~ivk~Li~~--Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~-------------------------- 238 (489)
T PHA02798 187 HCYFKYNIDRIDADILKLFVDN--GFIINKENKSHKKKFMEYLNSLLYDNKRFK-------------------------- 238 (489)
T ss_pred HHHHHhccccCCHHHHHHHHHC--CCCcccCCccccchHHHHHHHHHhhcccch--------------------------
Confidence 998765 478999999998 88888889899998772 122222
Q ss_pred HHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHH
Q 007858 254 QALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKL 333 (587)
Q Consensus 254 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~ 333 (587)
.+++++|+. +.+++.++. .|.||||.|+..|+.+++++|+++|+| ++.+|..|+||||.|+.+++.++++.
T Consensus 239 --~~i~~~l~~-~~dvN~~d~-----~G~TPL~~A~~~~~~~~v~~LL~~GAd-in~~d~~G~TpL~~A~~~~~~~iv~~ 309 (489)
T PHA02798 239 --KNILDFIFS-YIDINQVDE-----LGFNPLYYSVSHNNRKIFEYLLQLGGD-INIITELGNTCLFTAFENESKFIFNS 309 (489)
T ss_pred --HHHHHHHHh-cCCCCCcCc-----CCccHHHHHHHcCcHHHHHHHHHcCCc-ccccCCCCCcHHHHHHHcCcHHHHHH
Confidence 677777655 577776554 889999999999999999999999999 79999999999999999999999999
Q ss_pred HHhcCcchhh
Q 007858 334 IYEMGFDKEL 343 (587)
Q Consensus 334 Ll~~g~~~~~ 343 (587)
|++++++++.
T Consensus 310 lL~~~~~~~~ 319 (489)
T PHA02798 310 ILNKKPNKNT 319 (489)
T ss_pred HHccCCCHHH
Confidence 9999999874
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=239.14 Aligned_cols=208 Identities=25% Similarity=0.310 Sum_probs=155.9
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCC-CCCcHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDE-NGNTAFCFAAAVGSVEIAQFMLQR-NPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~-~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~~~~g~tpL~~A 155 (587)
+.++.+.+++.....-|+.+++.. +.+ ++.++. +|+||||+||..|+.+++++|++. +.. ++-+|..|+||||.|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~-~kS-L~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~-~ddkDdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSD-PKS-LNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVK-PDDKDDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcC-hhh-hhccccccCCceeeeeeecCchhHHHHHHhcCCCC-CCCccccCCchhhhh
Confidence 456777777777777777777765 334 565555 777888888877888888777743 333 355677777777777
Q ss_pred HHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCC
Q 007858 156 ALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPG 235 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~ 235 (587)
|..|+.|+|+.|+.+. +.+++..+..|.|+||+|+.++.
T Consensus 80 ~s~g~~evVk~Ll~r~---------------------------------~advna~tn~G~T~LHyAagK~r-------- 118 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRS---------------------------------GADVNATTNGGQTCLHYAAGKGR-------- 118 (226)
T ss_pred hhcCcHHHHHHHhcCC---------------------------------CCCcceecCCCcceehhhhcCCh--------
Confidence 7777777777777663 45566677777777777777775
Q ss_pred CccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCC
Q 007858 236 WLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG 315 (587)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 315 (587)
.++.++|+++|+.++.++. .|.||||-||.-|..+++++|+..++. +|..|+.|
T Consensus 119 --------------------~eIaqlLle~ga~i~~kD~-----~~qtplHRAAavGklkvie~Li~~~a~-~n~qDk~G 172 (226)
T KOG4412|consen 119 --------------------LEIAQLLLEKGALIRIKDK-----QGQTPLHRAAAVGKLKVIEYLISQGAP-LNTQDKYG 172 (226)
T ss_pred --------------------hhHHHHHHhcCCCCccccc-----ccCchhHHHHhccchhhHHHHHhcCCC-CCcccccC
Confidence 7777777777777766554 667888888888888888888888877 78899999
Q ss_pred CchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHH
Q 007858 316 RSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAA 360 (587)
Q Consensus 316 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~ 360 (587)
+||||.|...|+.++..+|+++|++.+ ..|++| ||+-.|+
T Consensus 173 ~TpL~~al~e~~~d~a~lLV~~gAd~~----~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 173 FTPLHHALAEGHPDVAVLLVRAGADTD----REDKEG-TALRIAC 212 (226)
T ss_pred ccHHHHHHhccCchHHHHHHHhcccee----eccccC-chHHHHH
Confidence 999999988889999999999998877 488888 8876664
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=291.47 Aligned_cols=297 Identities=11% Similarity=0.090 Sum_probs=232.9
Q ss_pred HHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC---CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcC--CHHH
Q 007858 55 CNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK---QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVG--SVEI 129 (587)
Q Consensus 55 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g--~~~i 129 (587)
...++..+ ++-.+++...|.+|+||||+|+..| +.++|++|+++| ++ ++.+|..|.||||+|+..+ +.|+
T Consensus 20 ~~~~~~~~--~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~G--Ad-in~kD~~G~TPLh~Aa~~~~~~~eI 94 (672)
T PHA02730 20 YKKIKLEI--ETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRG--VE-RLCRNNEGLTPLGVYSKRKYVKSQI 94 (672)
T ss_pred HHHHHHHH--HHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC--CC-CcccCCCCCChHHHHHHcCCCcHHH
Confidence 34577777 4555676444889999999999997 599999999999 99 9999999999999999977 7999
Q ss_pred HHHHHhcCCcc-cccCCCCCCcHHHHHHH--hCChHHHHHHhhcCC--CCCCC-----CCCchHHHHHHHhCcHHHHHHH
Q 007858 130 AQFMLQRNPNL-LTIRGGGQMTPLYIAAL--FGQSKMASFLYRQNE--DNLEP-----DDLENTFFVSIETGLYGLALQL 199 (587)
Q Consensus 130 v~~Ll~~~~~l-~~~~~~~g~tpL~~A~~--~g~~~~v~~Ll~~~~--~~~~~-----~~g~t~l~~a~~~~~~~~v~~L 199 (587)
|++|++.|++. ++..+..+.+|||.++. +++.+++++|++.+. ++... ..|.+|++++...++.+++++|
T Consensus 95 v~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklL 174 (672)
T PHA02730 95 VHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWL 174 (672)
T ss_pred HHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHH
Confidence 99999996542 25577778999998888 888999999997443 33321 3789999999999999999999
Q ss_pred HHhccccccc-------ccccC-CchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccch
Q 007858 200 LKKNKKLLAG-------ATHAK-YGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271 (587)
Q Consensus 200 l~~~~~~~~~-------~~d~~-g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~ 271 (587)
++. |+..+ ..+.. +.|.||+....... . .....|++++|+++|++++.
T Consensus 175 i~~--g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~-~---------------------~~n~~eiv~lLIs~GadIN~ 230 (672)
T PHA02730 175 LKS--ECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE-S---------------------ESLSKDVIKCLIDNNVSIHG 230 (672)
T ss_pred HHc--CCcccccccccccccCCccchhHHHHHHhhhh-h---------------------hccCHHHHHHHHHCCCCCCC
Confidence 998 66653 13333 44566655544211 0 00128999999999999988
Q ss_pred hhhhhhccCCChHHHH--HHHcCcHHHHHHHHH--------------------------------hCCCcccc-------
Q 007858 272 KDVLKLISKPSKLLFD--AAHSGNFKFLAVLTR--------------------------------SYPDLVHQ------- 310 (587)
Q Consensus 272 ~~~~~~~~~g~t~Lh~--Aa~~g~~~iv~~Ll~--------------------------------~~~~~~~~------- 310 (587)
++. .|.||||+ |+..|+.|+++.|++ ++.| ...
T Consensus 231 kd~-----~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~~ 304 (672)
T PHA02730 231 RDE-----GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVD-MEIVNLLIEG 304 (672)
T ss_pred CCC-----CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcc-hHHHHHHhhc
Confidence 765 89999995 556688999999999 5666 344
Q ss_pred -------------ccCCCCc---------------------hHHHHHHcC---ChhHHHHHHhcCcchhhhhhhccCCCC
Q 007858 311 -------------LDENGRS---------------------IFHIAVMHR---HADTFKLIYEMGFDKELIATYVDVSGN 353 (587)
Q Consensus 311 -------------~d~~g~t---------------------~Lh~A~~~~---~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 353 (587)
.|..|.+ .||.=..++ +.+++++|+++|++++ . +..|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN----~-k~~G~ 379 (672)
T PHA02730 305 RHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMD----K-TTDNN 379 (672)
T ss_pred cCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCC----c-CCCCC
Confidence 5677765 778777765 5899999999999987 4 47999
Q ss_pred cHHHHHHHcCC----CCCCCCCCCchHHHHHHhhhHHHHHHhcccc--cccccCCCCCCchhh
Q 007858 354 NLLHLAAQYSN----PKPISKVPGAALEMQQELKTFKEVETIVKPS--FKEMKNNDGKTPWEL 410 (587)
Q Consensus 354 TpLhlA~~~~~----~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~--~~~~~n~~g~t~l~~ 410 (587)
||||+|+..++ .++++.| +.+|+ +++.+|.+|+|||+.
T Consensus 380 TpLH~Aa~~nnn~i~~eIvelL-------------------Is~Ga~~dIN~kd~~G~T~Lh~ 423 (672)
T PHA02730 380 YPLHDYFVNNNNIVDVNVVRFI-------------------VENNGHMAINHVSNNGRLCMYG 423 (672)
T ss_pred cHHHHHHHHcCCcchHHHHHHH-------------------HHcCCCccccccccCCCchHhH
Confidence 99999998874 4655555 44776 689999999999983
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=266.19 Aligned_cols=158 Identities=20% Similarity=0.252 Sum_probs=148.3
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+-.|.+||..|+..|++++|+.|+ ++++++|.. +..+.|||--||..|+.|+||+|++++ +| ++..|..|.|+
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~--~~ga~VN~t-T~TNStPLraACfDG~leivKyLvE~g--ad-~~IanrhGhTc 153 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLL--RRGASVNDT-TRTNSTPLRAACFDGHLEIVKYLVEHG--AD-PEIANRHGHTC 153 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHH--HhcCccccc-cccCCccHHHHHhcchhHHHHHHHHcC--CC-CcccccCCCee
Confidence 3557889999999999999999999 677999987 788889999999999999999999999 99 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLAL 197 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~ 197 (587)
||+||..||.+|+++|++.|+++ +.++..|.|+||.|++.|+.|++++|+++++.-..|..|.|||..|...|+.++++
T Consensus 154 LmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe 232 (615)
T KOG0508|consen 154 LMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVE 232 (615)
T ss_pred EEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHH
Confidence 99999999999999999999996 99999999999999999999999999999995556777999999999999999999
Q ss_pred HHHHh
Q 007858 198 QLLKK 202 (587)
Q Consensus 198 ~Ll~~ 202 (587)
.|++.
T Consensus 233 ~L~~~ 237 (615)
T KOG0508|consen 233 RLLQC 237 (615)
T ss_pred HHhcC
Confidence 99954
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=280.42 Aligned_cols=329 Identities=12% Similarity=0.069 Sum_probs=224.9
Q ss_pred cCCCChHhHHHHHcCCH----HHHHHHHhhcCccchhhhcCCCCCcHHHH-HHhcCCHHHHHHHHHccCCCCccccCCCC
Q 007858 39 YSHKCVPLYKAALKGDC----NEAKRILGDDHQSMLRAAVTKGYQTILHV-ATGAKQTNFVKQMVELTGHDNLLSLQDEN 113 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~-A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~ 113 (587)
..++.||||.=..+.+. +++-.|+ ...+.. +-+|.+|+|+ |...|+.|+|++|+++| ++ ++.++..
T Consensus 34 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-n~~~~~~~~~~~s~n~~lElvk~LI~~G--Ad-vN~~~n~ 104 (631)
T PHA02792 34 EYDGETPLKAYVTKKNNNIKNDVVILLL-----SSVDYK-NINDFDIFEYLCSDNIDIELLKLLISKG--LE-INSIKNG 104 (631)
T ss_pred ccCCCccHHHHHhhhhhhHHHHHHHHHH-----hCCCcC-ccCCccHHHHHHHhcccHHHHHHHHHcC--CC-cccccCC
Confidence 34567999887555542 2444444 233344 6778889985 55678899999999998 88 8888888
Q ss_pred CCcHHHHHHH-cCCHHHHHHHHhcCCcc-----------------------------------cccCCCCCCcHHHHHHH
Q 007858 114 GNTAFCFAAA-VGSVEIAQFMLQRNPNL-----------------------------------LTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 114 g~TpLh~Aa~-~g~~~iv~~Ll~~~~~l-----------------------------------~~~~~~~g~tpL~~A~~ 157 (587)
|.||+|+|+. .++.|++++|+++|++. .+..|+.|.||||+|+.
T Consensus 105 ~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~ 184 (631)
T PHA02792 105 INIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYII 184 (631)
T ss_pred CCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHh
Confidence 8999999865 68999999999998763 12345567777777777
Q ss_pred hC-------ChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhC--cHHHHHHHHHhcccccccccccCCchHHH-------
Q 007858 158 FG-------QSKMASFLYRQNE-DNLEPDDLENTFFVSIETG--LYGLALQLLKKNKKLLAGATHAKYGTAMH------- 220 (587)
Q Consensus 158 ~g-------~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~--~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh------- 220 (587)
++ +.|+++.|+++++ .+..|..|.||||+|+... ..|+++.|++.. ..- .+-+..|+
T Consensus 185 ~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~--~~~----~~~~~~l~~y~~~~~ 258 (631)
T PHA02792 185 TRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSN--YSG----NELMNILSNYLRKQY 258 (631)
T ss_pred hCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhcc--ccc----cchHhHHHHHHHHHh
Confidence 77 6777777777776 5556667777777777777 667777777641 100 00000010
Q ss_pred -------------HHhhCCC--CcccCCCCCccccchhhhh--------c----cCCCchHHHHHHHHHHHHhhccchhh
Q 007858 221 -------------MLARNPS--AFTSNCPGWLKVPGIKFIT--------N----NTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 221 -------------~a~~~~~--~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
.....+. ...+.+..|.....+..+. + ......-..+++++|+++|++....
T Consensus 259 ~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~- 337 (631)
T PHA02792 259 RNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYRF- 337 (631)
T ss_pred ccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccccC-
Confidence 0000000 0000000000000000000 0 0001112378999999999886421
Q ss_pred hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCC--CchHHHHHHcCCh---hHHHHHHhcCcchhhhhhhc
Q 007858 274 VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG--RSIFHIAVMHRHA---DTFKLIYEMGFDKELIATYV 348 (587)
Q Consensus 274 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g--~t~Lh~A~~~~~~---~iv~~Ll~~g~~~~~~~~~~ 348 (587)
.+..+++.|+..|+.+++++|+++|++ ++..|.+| .||||+|...... +++++|+++|++++ .+
T Consensus 338 ------~~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN----~k 406 (631)
T PHA02792 338 ------KHINKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDIN----KI 406 (631)
T ss_pred ------CcchHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccc----cc
Confidence 246789999999999999999999999 68888775 6999998877665 46889999999976 79
Q ss_pred cCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhhHH
Q 007858 349 DVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTD 413 (587)
Q Consensus 349 d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~~ 413 (587)
|..|+||||+|+..++.++++.| +.+|++++.+|..|+||+++|..
T Consensus 407 D~~G~TPLh~Aa~~~n~eivelL-------------------Ls~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 407 DKHGRSILYYCIESHSVSLVEWL-------------------IDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred cccCcchHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999987776665 56899999999999999999864
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=269.95 Aligned_cols=285 Identities=12% Similarity=0.103 Sum_probs=227.3
Q ss_pred CCCCcccCCCChHhHH-HHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHh-cCCHHHHHHHHHccCCCC-----
Q 007858 33 QNDKKQYSHKCVPLYK-AALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATG-AKQTNFVKQMVELTGHDN----- 105 (587)
Q Consensus 33 ~~~~~~~~~~~t~L~~-Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~-~g~~~iv~~Ll~~~~~~~----- 105 (587)
..-...+-+|.+++|. |...|++|+|+.|+ .+|++++.. ++.|.||+|+|+. .|+.|++++|++.|.+.+
T Consensus 62 ~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI--~~GAdvN~~-~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~ 138 (631)
T PHA02792 62 SSVDYKNINDFDIFEYLCSDNIDIELLKLLI--SKGLEINSI-KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQY 138 (631)
T ss_pred hCCCcCccCCccHHHHHHHhcccHHHHHHHH--HcCCCcccc-cCCCCcceeEeecCCCChHHHHHHHHCCCCccccccc
Confidence 4444566678889876 78899999999999 689999988 7779999999976 699999999999993200
Q ss_pred ----------------------------ccccCCCCCCcHHHHHHHcC-------CHHHHHHHHhcCCcccccCCCCCCc
Q 007858 106 ----------------------------LLSLQDENGNTAFCFAAAVG-------SVEIAQFMLQRNPNLLTIRGGGQMT 150 (587)
Q Consensus 106 ----------------------------ll~~~d~~g~TpLh~Aa~~g-------~~~iv~~Ll~~~~~l~~~~~~~g~t 150 (587)
.++.+|..|.||||+|+.++ +.|++++|+++|+++ +..|..|.|
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t 217 (631)
T PHA02792 139 GYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHT 217 (631)
T ss_pred CcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCCh
Confidence 23466778999999999999 899999999999996 889999999
Q ss_pred HHHHHHHhC--ChHHHHHHhhcCC--CCC------------CCCC-------------C---------------------
Q 007858 151 PLYIAALFG--QSKMASFLYRQNE--DNL------------EPDD-------------L--------------------- 180 (587)
Q Consensus 151 pL~~A~~~g--~~~~v~~Ll~~~~--~~~------------~~~~-------------g--------------------- 180 (587)
|||+|+.+. ..|++++|++... ... +..+ |
T Consensus 218 ~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~ 297 (631)
T PHA02792 218 TLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISS 297 (631)
T ss_pred HHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHH
Confidence 999999999 7899999987532 110 0000 0
Q ss_pred ---------chHHHHHHHhC--cHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccC
Q 007858 181 ---------ENTFFVSIETG--LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNT 249 (587)
Q Consensus 181 ---------~t~l~~a~~~~--~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
+-.||.-...+ +.++++.|++. |.... ...+..+++.|+..++
T Consensus 298 ~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~--Ga~~~--r~~~~n~~~~Aa~~gn---------------------- 351 (631)
T PHA02792 298 ILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDE--GATLY--RFKHINKYFQKFDNRD---------------------- 351 (631)
T ss_pred HHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHC--CCccc--cCCcchHHHHHHHcCC----------------------
Confidence 11233333444 45777888887 55432 2235567888888887
Q ss_pred CCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcH---HHHHHHHHhCCCccccccCCCCchHHHHHHcC
Q 007858 250 DSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNF---KFLAVLTRSYPDLVHQLDENGRSIFHIAVMHR 326 (587)
Q Consensus 250 ~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~---~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 326 (587)
.+++++|+++|++++..+. .+.+.||||.|+..... ++++.|+++|++ ++.+|..|+||||+|+..+
T Consensus 352 ------~eIVelLIs~GADIN~kD~---~g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~ 421 (631)
T PHA02792 352 ------PKVVEYILKNGNVVVEDDD---NIINIMPLFPTLSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESH 421 (631)
T ss_pred ------HHHHHHHHHcCCchhhhcC---CCCChhHHHHHHHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcC
Confidence 9999999999999876653 22357999998877654 457888999999 7999999999999999999
Q ss_pred ChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHH
Q 007858 327 HADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ 361 (587)
Q Consensus 327 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~ 361 (587)
+.+++++|+++|++++ .+|..|+||||+|+.
T Consensus 422 n~eivelLLs~GADIN----~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 422 SVSLVEWLIDNGADIN----ITTKYGSTCIGICVI 452 (631)
T ss_pred CHHHHHHHHHCCCCCC----CcCCCCCCHHHHHHH
Confidence 9999999999999976 799999999999986
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=260.54 Aligned_cols=211 Identities=19% Similarity=0.281 Sum_probs=171.2
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCC-CCCCcHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFC 119 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh 119 (587)
.....++.|++.|+++.|+.++ +..+.+++.. |.+|.|+||+||.+++.+++++|+++| ++ +|..+ .-+.||||
T Consensus 43 ~~~~~~v~A~q~G~l~~v~~lv-e~~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~~g--ad-vn~~gG~l~stPLH 117 (600)
T KOG0509|consen 43 SSLDDIVKATQYGELETVKELV-ESEGESVNNP-DREGVTLLHWAAINNRLDVARYLISHG--AD-VNAIGGVLGSTPLH 117 (600)
T ss_pred hhhhhhhhHhhcchHHHHHHHH-hhcCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHHcC--CC-ccccCCCCCCCcch
Confidence 3456689999999999999999 5448888888 889999999999999999999999999 88 88877 67899999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQL 199 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~L 199 (587)
+|+++|+..+|++|+++|++ ++.+|.+|.||||.|++.|+.-++-||+.+++
T Consensus 118 WAar~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~--------------------------- 169 (600)
T KOG0509|consen 118 WAARNGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGA--------------------------- 169 (600)
T ss_pred HHHHcCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcc---------------------------
Confidence 99999999999999999999 59999999999999999999999998888764
Q ss_pred HHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhcc
Q 007858 200 LKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLIS 279 (587)
Q Consensus 200 l~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 279 (587)
+.+.+|.+|+||||+|+.+++
T Consensus 170 -------d~d~~D~~grTpLmwAaykg~---------------------------------------------------- 190 (600)
T KOG0509|consen 170 -------DIDLRDNNGRTPLMWAAYKGF---------------------------------------------------- 190 (600)
T ss_pred -------cCCCcCCCCCCHHHHHHHhcc----------------------------------------------------
Confidence 344566666666666666553
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCCcccccc-CCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHH
Q 007858 280 KPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLD-ENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHL 358 (587)
Q Consensus 280 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhl 358 (587)
...++.||+-++. +..+| .+|.||||+|+..|+.+++++|++.|++.+ .+|.+|.||+.+
T Consensus 191 --------------~~~v~~LL~f~a~-~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d----~~~~~g~tp~~L 251 (600)
T KOG0509|consen 191 --------------ALFVRRLLKFGAS-LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLD----KTNTNGKTPFDL 251 (600)
T ss_pred --------------cHHHHHHHHhccc-ccccccccCCchHHHHHhcCCcceEehhhhcCCccc----ccccCCCCHHHH
Confidence 3335566666666 45555 778888888888888888876666666655 577778888888
Q ss_pred HHHc
Q 007858 359 AAQY 362 (587)
Q Consensus 359 A~~~ 362 (587)
|...
T Consensus 252 A~~~ 255 (600)
T KOG0509|consen 252 AQER 255 (600)
T ss_pred HHHh
Confidence 8666
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=252.30 Aligned_cols=210 Identities=23% Similarity=0.249 Sum_probs=178.8
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHc-cCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCC-CCCCcHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVEL-TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG-GGQMTPLYIA 155 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~-~~g~tpL~~A 155 (587)
-.+.++.|++.|..+-|+.|++. + .+ ++..|.+|.|+||+||.+++.+++++|+++|+++ +..+ .-+.||||+|
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g--~~-v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWA 119 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEG--ES-VNNPDREGVTLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWA 119 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcC--cC-CCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHH
Confidence 35678899999999999999999 6 77 8999999999999999999999999999999997 6555 6788999999
Q ss_pred HHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCC
Q 007858 156 ALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPG 235 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~ 235 (587)
+++|+..+|++|+++|+ +++.+|.+|
T Consensus 120 ar~G~~~vv~lLlqhGA----------------------------------dpt~~D~~G-------------------- 145 (600)
T KOG0509|consen 120 ARNGHISVVDLLLQHGA----------------------------------DPTLKDKQG-------------------- 145 (600)
T ss_pred HHcCcHHHHHHHHHcCC----------------------------------CCceecCCC--------------------
Confidence 99999999999998876 333445444
Q ss_pred CccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCC
Q 007858 236 WLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG 315 (587)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 315 (587)
.+|+|.|+..|+.-++-++|.+++| ++.+|.+|
T Consensus 146 ----------------------------------------------~~~lHla~~~~~~~~vayll~~~~d-~d~~D~~g 178 (600)
T KOG0509|consen 146 ----------------------------------------------LTPLHLAAQFGHTALVAYLLSKGAD-IDLRDNNG 178 (600)
T ss_pred ----------------------------------------------CcHHHHHHHhCchHHHHHHHHhccc-CCCcCCCC
Confidence 4555555555667778888889988 79999999
Q ss_pred CchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccc
Q 007858 316 RSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPS 395 (587)
Q Consensus 316 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~ 395 (587)
+||||+|+.+|+...++.|++-|+.++. ..|++|+||||.|+..|+.+.+..+ +..++
T Consensus 179 rTpLmwAaykg~~~~v~~LL~f~a~~~~---~d~~~g~TpLHwa~~~gN~~~v~Ll-------------------~~g~~ 236 (600)
T KOG0509|consen 179 RTPLMWAAYKGFALFVRRLLKFGASLLL---TDDNHGNTPLHWAVVGGNLTAVKLL-------------------LEGGA 236 (600)
T ss_pred CCHHHHHHHhcccHHHHHHHHhcccccc---cccccCCchHHHHHhcCCcceEehh-------------------hhcCC
Confidence 9999999999999989999999998763 3449999999999999999988843 34568
Q ss_pred cccccCCCCCCchhhhHHh
Q 007858 396 FKEMKNNDGKTPWELFTDE 414 (587)
Q Consensus 396 ~~~~~n~~g~t~l~~a~~~ 414 (587)
+.+..|.+|+||+++|.+.
T Consensus 237 ~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 237 DLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cccccccCCCCHHHHHHHh
Confidence 8899999999999999776
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=219.30 Aligned_cols=179 Identities=15% Similarity=0.182 Sum_probs=134.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCcccccCC-CCCCcH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVG--SVEIAQFMLQRNPNLLTIRG-GGQMTP 151 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g--~~~iv~~Ll~~~~~l~~~~~-~~g~tp 151 (587)
.+.+.||||.|++.|+.++|+.|++. .+.+|..|.||||+|+..+ +.+++++|+++|+++ +.++ ..|.||
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~------~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~Tp 90 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF------VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSA 90 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh------hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCH
Confidence 45678888888888888888888864 3456788888888888754 788888888888886 6665 478888
Q ss_pred HHHHHHh---CChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCC
Q 007858 152 LYIAALF---GQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA 228 (587)
Q Consensus 152 L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~ 228 (587)
||+|+.. ++.+++++|+++++ .++.+|..|.||||.|+...
T Consensus 91 Lh~a~~~~~~~~~eiv~~Ll~~ga----------------------------------din~~d~~G~TpLh~a~~~~-- 134 (209)
T PHA02859 91 LHHYLSFNKNVEPEILKILIDSGS----------------------------------SITEEDEDGKNLLHMYMCNF-- 134 (209)
T ss_pred HHHHHHhCccccHHHHHHHHHCCC----------------------------------CCCCcCCCCCCHHHHHHHhc--
Confidence 8887653 24566666665543 44455666666666554321
Q ss_pred cccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCcc
Q 007858 229 FTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLV 308 (587)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~ 308 (587)
.++.+++++|+++|++ +
T Consensus 135 --------------------------------------------------------------~~~~~iv~~Li~~gad-i 151 (209)
T PHA02859 135 --------------------------------------------------------------NVRINVIKLLIDSGVS-F 151 (209)
T ss_pred --------------------------------------------------------------cCCHHHHHHHHHcCCC-c
Confidence 2467888888888888 6
Q ss_pred ccccCCCCchHHH-HHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC
Q 007858 309 HQLDENGRSIFHI-AVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS 363 (587)
Q Consensus 309 ~~~d~~g~t~Lh~-A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~ 363 (587)
+.+|.+|.||||. |+..++.+++++|+++|++++ .+|..|.||||+|...+
T Consensus 152 n~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~----~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 152 LNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN----ETNKSGYNCYDLIKFRN 203 (209)
T ss_pred ccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHhhhh
Confidence 8889999999995 456788999999999998866 68999999999998764
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=214.59 Aligned_cols=176 Identities=12% Similarity=0.105 Sum_probs=156.8
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC--CHHHHHHHHHccCCCCccccCC-CCCC
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK--QTNFVKQMVELTGHDNLLSLQD-ENGN 115 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~ll~~~d-~~g~ 115 (587)
....+||||.|+..|+.+.|+.|+ + . ++.. |..|.||||+|+..+ +.+++++|++.| ++ ++.++ ..|.
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li-~-~---~n~~-~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g--ad-vn~~~~~~g~ 88 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWI-K-F---VNDC-NDLYETPIFSCLEKDKVNVEILKFLIENG--AD-VNFKTRDNNL 88 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHH-H-h---hhcc-CccCCCHHHHHHHcCCCCHHHHHHHHHCC--CC-CCccCCCCCC
Confidence 456799999999999999999999 3 2 3444 888999999999854 899999999999 88 88887 5899
Q ss_pred cHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH--hCChHHHHHHhhcCC-CCCCCCCCchHHHH-HH
Q 007858 116 TAFCFAAAV---GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL--FGQSKMASFLYRQNE-DNLEPDDLENTFFV-SI 188 (587)
Q Consensus 116 TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~--~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~-a~ 188 (587)
||||+|+.. ++.+++++|+++|+++ +.+|.+|.||||.|+. .++.+++++|++.++ .+..|.+|.||||. +.
T Consensus 89 TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~ 167 (209)
T PHA02859 89 SALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYIL 167 (209)
T ss_pred CHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHH
Confidence 999998764 4799999999999996 9999999999999986 468999999999999 88899999999995 56
Q ss_pred HhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCC
Q 007858 189 ETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNP 226 (587)
Q Consensus 189 ~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~ 226 (587)
..++.++++.|++. +..++.+|..|.||||+|..++
T Consensus 168 ~~~~~~iv~~Ll~~--Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 168 FHSDKKIFDFLTSL--GIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred hcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHhhhh
Confidence 77899999999998 8899999999999999998765
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-24 Score=238.20 Aligned_cols=250 Identities=15% Similarity=0.101 Sum_probs=168.7
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcC--ccchhhhcCCCCCcHHH-HHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDH--QSMLRAAVTKGYQTILH-VATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~--~~~~~~~~~~~g~t~Lh-~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..+++.|++.|+.+.++.++ ++ +.++|.. |..|.|||| .|+..++.++++.|++.+ . .+..|.|
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL--~~~~~~~in~~-d~~G~t~Lh~~A~~~~~~eiv~lLl~~g--~-----~~~~G~T 84 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDL--EEPKKLNINCP-DRLGRSALFVAAIENENLELTELLLNLS--C-----RGAVGDT 84 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHh--ccccccCCCCc-CccchhHHHHHHHhcChHHHHHHHHhCC--C-----CCCcChH
Confidence 45678899999999999999999 44 6677766 899999999 888999999999999987 3 6788999
Q ss_pred HHHHHHHcC---CHHHHHHHHhcCCc-----c----cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCC------
Q 007858 117 AFCFAAAVG---SVEIAQFMLQRNPN-----L----LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEP------ 177 (587)
Q Consensus 117 pLh~Aa~~g---~~~iv~~Ll~~~~~-----l----~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~------ 177 (587)
|||.|+..+ ..++++.+.+.+++ . ....+..|.||||+|+.+|+.+++++|+++|+ ++..+
T Consensus 85 ~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~ 164 (743)
T TIGR00870 85 LLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFV 164 (743)
T ss_pred HHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhh
Confidence 999998732 22344444444432 0 01223569999999999999999999999998 44322
Q ss_pred --------CCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccC
Q 007858 178 --------DDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNT 249 (587)
Q Consensus 178 --------~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
..|.+|||.|+..++.++++.|++. |++++.+|..|+||||+|+..+..
T Consensus 165 ~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~--gadin~~d~~g~T~Lh~A~~~~~~--------------------- 221 (743)
T TIGR00870 165 KSQGVDSFYHGESPLNAAACLGSPSIVALLSED--PADILTADSLGNTLLHLLVMENEF--------------------- 221 (743)
T ss_pred cCCCCCcccccccHHHHHHHhCCHHHHHHHhcC--CcchhhHhhhhhHHHHHHHhhhhh---------------------
Confidence 1345555555555555555555554 445555555555555555544310
Q ss_pred CCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHH---hCCCc---cccccCCCCchHHHHH
Q 007858 250 DSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR---SYPDL---VHQLDENGRSIFHIAV 323 (587)
Q Consensus 250 ~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~---~~~~~---~~~~d~~g~t~Lh~A~ 323 (587)
. .+ .+.+ ...+.+.+++ .+.+. .+..|.+|.||||+|+
T Consensus 222 --~---~~------------------------~~~l-------~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~ 265 (743)
T TIGR00870 222 --K---AE------------------------YEEL-------SCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAA 265 (743)
T ss_pred --h---HH------------------------HHHH-------HHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhh
Confidence 0 00 0000 1122333333 32221 1567899999999999
Q ss_pred HcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHc
Q 007858 324 MHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQY 362 (587)
Q Consensus 324 ~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~ 362 (587)
..|+.+++++|++.+.... .....++.|.+++..-
T Consensus 266 ~~g~~~l~~lLL~~~~~~k----k~~a~~~~~~~~~~~~ 300 (743)
T TIGR00870 266 KEGRIVLFRLKLAIKYKQK----KFVAWPNGQQLLSLYW 300 (743)
T ss_pred hcCCccHHHHHHHHHHhcc----eeeccCcchHhHhhhc
Confidence 9999999999998765432 3456788888877653
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=223.69 Aligned_cols=204 Identities=12% Similarity=0.124 Sum_probs=155.5
Q ss_pred cCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccc------cCCCCCCcHHHHHHH--cCCHHHHHHHHhc
Q 007858 65 DHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAA--VGSVEIAQFMLQR 136 (587)
Q Consensus 65 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~------~~d~~g~TpLh~Aa~--~g~~~iv~~Ll~~ 136 (587)
.++.+++.. +.+| +|+..+..|+++.|+.+| .+ ++ .++..++|+||+++. .|+.++|++|+++
T Consensus 70 ~~~~~i~~~-~~~~-----~~~~~~~k~~~~~l~s~~--~~-~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~ 140 (437)
T PHA02795 70 IHRDNIDQY-IVDR-----LFAYITYKDIISALVSKN--YM-EDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDH 140 (437)
T ss_pred HcCcchhhh-hhhh-----HHhhcchHHHHHHHHhcc--cc-cchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHC
Confidence 566666665 4444 777888888888888887 55 55 567777888888877 6788888888888
Q ss_pred CCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCc
Q 007858 137 NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYG 216 (587)
Q Consensus 137 ~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~ 216 (587)
|+++ +. .++.||||.|+..++.+++++|+++|+.. +..+.++ ..+..|.
T Consensus 141 GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~--~n~~~~~--------------------------l~~~~~~ 189 (437)
T PHA02795 141 GAVI-YK--IECLNAYFRGICKKESSVVEFILNCGIPD--ENDVKLD--------------------------LYKIIQY 189 (437)
T ss_pred CCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcc--cccccch--------------------------hhhhhcc
Confidence 8876 44 34577888888888888888888777511 0011111 1123467
Q ss_pred hHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHH
Q 007858 217 TAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKF 296 (587)
Q Consensus 217 t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~i 296 (587)
|++|.++..++ .+++++|+++|++++..+ ..|.||||.|+..|+.++
T Consensus 190 t~l~~a~~~~~----------------------------~eIve~LIs~GADIN~kD-----~~G~TpLh~Aa~~g~~ei 236 (437)
T PHA02795 190 TRGFLVDEPTV----------------------------LEIYKLCIPYIEDINQLD-----AGGRTLLYRAIYAGYIDL 236 (437)
T ss_pred chhHHHHhcCH----------------------------HHHHHHHHhCcCCcCcCC-----CCCCCHHHHHHHcCCHHH
Confidence 88888888776 899999999998888765 378999999999999999
Q ss_pred HHHHHHhCCCccccccCCCCchHHHHHHcCC--------hhHHHHHHhcCcchh
Q 007858 297 LAVLTRSYPDLVHQLDENGRSIFHIAVMHRH--------ADTFKLIYEMGFDKE 342 (587)
Q Consensus 297 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~--------~~iv~~Ll~~g~~~~ 342 (587)
+++|+++|++ ++.+|..|+||||+|+.+|+ .+++++|+++|++++
T Consensus 237 VelLL~~GAd-IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 237 VSWLLENGAN-VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred HHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999999 79999999999999999884 689999999998865
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=221.90 Aligned_cols=170 Identities=13% Similarity=-0.010 Sum_probs=141.5
Q ss_pred HHHHcCCHHHHHHHHhhcCccchh------hhcCCCCCcHHHHHHh--cCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 48 KAALKGDCNEAKRILGDDHQSMLR------AAVTKGYQTILHVATG--AKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 48 ~Aa~~g~~~~v~~Ll~~~~~~~~~------~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
.|+..+..|+++.|+ .++++++ .+ +..++|+||.|+. .|+.++|++|+++| ++ ++.+ ++.||||
T Consensus 83 ~~~~~~~k~~~~~l~--s~~~~~~~~~~~~~~-~~~~~~~L~~~~~n~~n~~eiV~~LI~~G--AD-In~~--~~~t~lh 154 (437)
T PHA02795 83 LFAYITYKDIISALV--SKNYMEDIFSIIIKN-CNSVQDLLLYYLSNAYVEIDIVDFMVDHG--AV-IYKI--ECLNAYF 154 (437)
T ss_pred HHhhcchHHHHHHHH--hcccccchhhhhhhc-cccccHHHHHHHHhcCCCHHHHHHHHHCC--CC-CCCC--CCCCHHH
Confidence 899999999999999 6777766 54 7789999999999 89999999999999 88 7764 4589999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccC-----CCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIR-----GGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLY 193 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~-----~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~ 193 (587)
.|+..|+.+++++|+++|++..+.. +..|.||+|.|+..++.|++++|+++|+ .+..+.+|.||||.|+..|+.
T Consensus 155 ~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~ 234 (437)
T PHA02795 155 RGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYI 234 (437)
T ss_pred HHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCH
Confidence 9999999999999999997532322 1347788888888888999999998888 777778888888888888888
Q ss_pred HHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 194 GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 194 ~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
++++.|+++ |+.++.+|..|.||||+|+..|+
T Consensus 235 eiVelLL~~--GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 235 DLVSWLLEN--GANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCC
Confidence 888888876 77777777778777777777663
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=199.10 Aligned_cols=208 Identities=18% Similarity=0.113 Sum_probs=147.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYG 194 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~ 194 (587)
.-+-.+.+.|+.+++..++.-.++-+.-.+.+|+.+++.++-.++.+.++.++.+++ .+..+.-+++|+.+++...+.+
T Consensus 64 ~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~ 143 (296)
T KOG0502|consen 64 SLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLD 143 (296)
T ss_pred cccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHH
Confidence 333344444444444444444333333334444444444444444444444444444 3444444444444444444444
Q ss_pred HHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhh
Q 007858 195 LALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDV 274 (587)
Q Consensus 195 ~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 274 (587)
.+..+.++ .++..|+.|.|||.+|+..|+ ++++++|++.|++++.-..
T Consensus 144 ~~~~~~~n----~VN~~De~GfTpLiWAaa~G~----------------------------i~vV~fLL~~GAdp~~lgk 191 (296)
T KOG0502|consen 144 VVDLLVNN----KVNACDEFGFTPLIWAAAKGH----------------------------IPVVQFLLNSGADPDALGK 191 (296)
T ss_pred HHHHHhhc----cccCccccCchHhHHHHhcCc----------------------------hHHHHHHHHcCCChhhhhh
Confidence 44444433 567789999999999999997 8999999999998876543
Q ss_pred hhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCc
Q 007858 275 LKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNN 354 (587)
Q Consensus 275 ~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~T 354 (587)
...++|..|++.|..+++++||++++| +|..|.+|-|||-+|++.++.++++.|++.|++++ ..|..|++
T Consensus 192 -----~resALsLAt~ggytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t----~e~dsGy~ 261 (296)
T KOG0502|consen 192 -----YRESALSLATRGGYTDIVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT----QEDDSGYW 261 (296)
T ss_pred -----hhhhhHhHHhcCChHHHHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCCCcc----cccccCCc
Confidence 337999999999999999999999999 79999999999999999999999999999999976 68999999
Q ss_pred HHHHHHHcCCC
Q 007858 355 LLHLAAQYSNP 365 (587)
Q Consensus 355 pLhlA~~~~~~ 365 (587)
++.+|+..|+.
T Consensus 262 ~mdlAValGyr 272 (296)
T KOG0502|consen 262 IMDLAVALGYR 272 (296)
T ss_pred HHHHHHHhhhH
Confidence 99999999974
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-25 Score=224.92 Aligned_cols=241 Identities=21% Similarity=0.251 Sum_probs=179.0
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCc------------cchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccC
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQ------------SMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQ 110 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~------------~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~ 110 (587)
.+-|..|+..|+.+.+..+| +..+ ...+.. |.+|.|.||.|+..|+.++++.|++.. +- ++..
T Consensus 4 ~qel~~a~ka~d~~tva~ll-~~~~~r~~~l~~~trsds~n~q-d~~gfTalhha~Lng~~~is~llle~e--a~-ldl~ 78 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLL-SSKKGRSGLLFFTTRSDSHNLQ-DYSGFTLLHHAVLNGQNQISKLLLDYE--AL-LDLC 78 (854)
T ss_pred hhhHHHhhhcccHHHHHHhc-cCCCCCCCCCCCCCCCcccccc-CccchhHHHHHHhcCchHHHHHHhcch--hh-hhhh
Confidence 34578899999999999999 3221 134444 788999999999999999999999986 54 7788
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHH
Q 007858 111 DENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIE 189 (587)
Q Consensus 111 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~ 189 (587)
|..|.+|||+|+..|+.|++++++.++.. ++..+.+|.||||.|++.||.+++.+|+++++ +-+.++++.|++.+|++
T Consensus 79 d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 79 DTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred hccCcceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHH
Confidence 88999999999999999999999998855 58899999999999999999999999999998 77788888899999999
Q ss_pred hCcHHHHHHHHHhccccc------ccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHH
Q 007858 190 TGLYGLALQLLKKNKKLL------AGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLW 263 (587)
Q Consensus 190 ~~~~~~v~~Ll~~~~~~~------~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll 263 (587)
-|..++++.|++.+.+.. ...++.
T Consensus 158 fgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 187 (854)
T KOG0507|consen 158 FGRAEVVQMLLQKKFPVQSSLRVGDIKRPF-------------------------------------------------- 187 (854)
T ss_pred hhhhHHHHHHhhhccchhhcccCCCCCCCC--------------------------------------------------
Confidence 888888888887610000 011122
Q ss_pred HHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhh
Q 007858 264 KEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL 343 (587)
Q Consensus 264 ~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 343 (587)
.+.+|+|.|+++|+.++++.|++.|-+ +|.....| |+||.|+..|..++|++|++.|....
T Consensus 188 ----------------~~~~plHlaakngh~~~~~~ll~ag~d-in~~t~~g-talheaalcgk~evvr~ll~~gin~h- 248 (854)
T KOG0507|consen 188 ----------------PAIYPLHLAAKNGHVECMQALLEAGFD-INYTTEDG-TALHEAALCGKAEVVRFLLEIGINTH- 248 (854)
T ss_pred ----------------CCcCCcchhhhcchHHHHHHHHhcCCC-cccccccc-hhhhhHhhcCcchhhhHHHhhccccc-
Confidence 335666666666666666666666666 45554444 66666666666666666666665544
Q ss_pred hhhhccCCCCcHHHHHHH
Q 007858 344 IATYVDVSGNNLLHLAAQ 361 (587)
Q Consensus 344 ~~~~~d~~G~TpLhlA~~ 361 (587)
.+|.+|.|+|.+-..
T Consensus 249 ---~~n~~~qtaldil~d 263 (854)
T KOG0507|consen 249 ---IKNQHGQTALDIIID 263 (854)
T ss_pred ---cccccchHHHHHHHh
Confidence 466666666665544
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=235.35 Aligned_cols=240 Identities=17% Similarity=0.123 Sum_probs=180.2
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH-HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 76 KGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC-FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 76 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh-~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
..++..++.|++.|+.+.|+.+++.+...+ +|..|..|.|||| .|+.+++.+++++|+++|. .+..|.||||.
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~-in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~ 88 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLN-INCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHA 88 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccC-CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHH
Confidence 346789999999999999999999832377 8899999999999 8889999999999999876 56789999999
Q ss_pred HHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCC
Q 007858 155 AALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCP 234 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~ 234 (587)
|+. ++.+.++.++.... .. +.++..+ .+. .+.....+..|.||||+|+..++
T Consensus 89 A~~-~~~~~v~~ll~~l~-~~-~~~~~~~--------------~~~----~~~~~~~~~~G~TpLhlAa~~~~------- 140 (743)
T TIGR00870 89 ISL-EYVDAVEAILLHLL-AA-FRKSGPL--------------ELA----NDQYTSEFTPGITALHLAAHRQN------- 140 (743)
T ss_pred HHh-ccHHHHHHHHHHHh-hc-ccccCch--------------hhh----ccccccccCCCCcHHHHHHHhCC-------
Confidence 987 33344444433321 00 0000000 000 01112235679999999999998
Q ss_pred CCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhh---------hhccCCChHHHHHHHcCcHHHHHHHHHhCC
Q 007858 235 GWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL---------KLISKPSKLLFDAAHSGNFKFLAVLTRSYP 305 (587)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~---------~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~ 305 (587)
.++++.|+++|++++..... +....|.+|||.|+..|+.+++++|+++++
T Consensus 141 ---------------------~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 141 ---------------------YEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred ---------------------HHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence 99999999999998854321 122358999999999999999999999999
Q ss_pred CccccccCCCCchHHHHHHcC---------ChhHHHHHHhcCcch---hhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 306 DLVHQLDENGRSIFHIAVMHR---------HADTFKLIYEMGFDK---ELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 306 ~~~~~~d~~g~t~Lh~A~~~~---------~~~iv~~Ll~~g~~~---~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
| ++..|..|+||||+|+..+ ...+.+++++.++.. .-+.+.+|.+|.||||+|+..|+.++++.+
T Consensus 200 d-in~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lL 276 (743)
T TIGR00870 200 D-ILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLK 276 (743)
T ss_pred c-hhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHH
Confidence 8 7999999999999999986 234566666665443 222346899999999999999998876655
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=233.09 Aligned_cols=318 Identities=15% Similarity=0.127 Sum_probs=260.8
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
...+-.|+|-.||..|+.|.|..|+ ..++++..+ |+.|.+||.+|+-.||..+|+.|+.+. +++-...|..++|+
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv--~rganiehr-dkkgf~plImaatagh~tvV~~llk~h--a~veaQsdrtkdt~ 827 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLV--VRGANIEHR-DKKGFVPLIMAATAGHITVVQDLLKAH--ADVEAQSDRTKDTM 827 (2131)
T ss_pred cCccccccccccccCccHHHHHHHH--Hhccccccc-ccccchhhhhhcccCchHHHHHHHhhh--hhhhhhcccccCce
Confidence 3445578899999999999999988 677888777 899999999999999999999999887 77333467889999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC--CCCCCchHHHHHHHhCcHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNL--EPDDLENTFFVSIETGLYG 194 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~--~~~~g~t~l~~a~~~~~~~ 194 (587)
|-+||..|..++|++||..|++- ..+|-...|||.+|...|..++++.|+.+|. ++. -.+-|..||.+|..+|+.+
T Consensus 828 lSlacsggr~~vvelLl~~gank-ehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~ 906 (2131)
T KOG4369|consen 828 LSLACSGGRTRVVELLLNAGANK-EHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQA 906 (2131)
T ss_pred EEEecCCCcchHHHHHHHhhccc-cccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccH
Confidence 99999999999999999999884 7788888999999999999999999999997 443 4566889999999999999
Q ss_pred HHHHHHHhccccccccc-ccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhh
Q 007858 195 LALQLLKKNKKLLAGAT-HAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 195 ~v~~Ll~~~~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
.++.|++. +.+++.. ..+-+|+|-+|+..|+ .+++..|+...+++..+.
T Consensus 907 at~~ll~~--gsdiNaqIeTNrnTaltla~fqgr----------------------------~evv~lLLa~~anvehRa 956 (2131)
T KOG4369|consen 907 ATLSLLQP--GSDINAQIETNRNTALTLALFQGR----------------------------PEVVFLLLAAQANVEHRA 956 (2131)
T ss_pred HHHHHhcc--cchhccccccccccceeeccccCc----------------------------chHHHHHHHHhhhhhhhc
Confidence 99999987 6665543 4567889999988886 788999998888777665
Q ss_pred hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccc--cCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCC
Q 007858 274 VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQL--DENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVS 351 (587)
Q Consensus 274 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~--d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~ 351 (587)
. .|.|||..+|..|.+|+=+.|+..|+| ++.. -....|+|-+++..||.+.++.|+...+..+ .+|++
T Consensus 957 k-----tgltplme~AsgGyvdvg~~li~~gad-~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~----v~Nkk 1026 (2131)
T KOG4369|consen 957 K-----TGLTPLMEMASGGYVDVGNLLIAAGAD-TNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVR----VPNKK 1026 (2131)
T ss_pred c-----cCCcccchhhcCCccccchhhhhcccc-cccCCCCCcCCccceeecCCCchhhhHHhhCCcccee----cccCC
Confidence 3 778999999999999999999999988 4543 2445688999999999999999998877766 48999
Q ss_pred CCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhh-HHhhhHHHH
Q 007858 352 GNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELF-TDEHKTLLE 420 (587)
Q Consensus 352 G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a-~~~~~~l~~ 420 (587)
|+|+|.+|+.-|+...+..| +.++++.+..|+.-.++++-| +++|.++++
T Consensus 1027 G~T~Lwla~~Gg~lss~~il-------------------~~~~ad~d~qdnr~~S~~maafRKgh~~iVk 1077 (2131)
T KOG4369|consen 1027 GCTVLWLASAGGALSSCPIL-------------------VSSVADADQQDNRTNSRTMAAFRKGHFAIVK 1077 (2131)
T ss_pred CCcccchhccCCccccchHH-------------------hhcccChhhhhcccccccHHHHHhchhheec
Confidence 99999999998888777666 567788888888877777654 556665544
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-25 Score=233.97 Aligned_cols=293 Identities=16% Similarity=0.152 Sum_probs=265.7
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|.+||.+|+-.|+..+|+.|+ ++.+++...-|..++|+|-+||..|+.++|+.||..| ++ -..+|....|
T Consensus 785 hrdkkgf~plImaatagh~tvV~~ll--k~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~g--an-kehrnvsDyt 859 (2131)
T KOG4369|consen 785 HRDKKGFVPLIMAATAGHITVVQDLL--KAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAG--AN-KEHRNVSDYT 859 (2131)
T ss_pred ccccccchhhhhhcccCchHHHHHHH--hhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhh--cc-ccccchhhcC
Confidence 45778999999999999999999999 7888898887999999999999999999999999999 77 7789999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccC-CCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC-CCCCCchHHHHHHHhCcH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIR-GGGQMTPLYIAALFGQSKMASFLYRQNE-DNL-EPDDLENTFFVSIETGLY 193 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~-~~~~g~t~l~~a~~~~~~ 193 (587)
||.+|..-|..+++..|+..|.++.... .+-|..||++|..+||.+.++.|++.+. .+. ...+.+|.|-+|+..|..
T Consensus 860 Plsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~ 939 (2131)
T KOG4369|consen 860 PLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRP 939 (2131)
T ss_pred chhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcc
Confidence 9999999999999999999998873322 3568999999999999999999999987 444 456778999999999999
Q ss_pred HHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhh
Q 007858 194 GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 194 ~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
+++..||.. .+....+-..|.|||.-++..|. .++=+.|+..|+|.+...
T Consensus 940 evv~lLLa~--~anvehRaktgltplme~AsgGy----------------------------vdvg~~li~~gad~nasP 989 (2131)
T KOG4369|consen 940 EVVFLLLAA--QANVEHRAKTGLTPLMEMASGGY----------------------------VDVGNLLIAAGADTNASP 989 (2131)
T ss_pred hHHHHHHHH--hhhhhhhcccCCcccchhhcCCc----------------------------cccchhhhhcccccccCC
Confidence 999999997 88888999999999999999997 899999999999998765
Q ss_pred hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCC
Q 007858 274 VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGN 353 (587)
Q Consensus 274 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 353 (587)
.- ....|+|-+++..||...+..|+...+. +..+|++|.|+|..|+..|+...+.+|+++++|++ .+|+..+
T Consensus 990 vp---~T~dtalti~a~kGh~kfv~~lln~~at-v~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d----~qdnr~~ 1061 (2131)
T KOG4369|consen 990 VP---NTWDTALTIPANKGHTKFVPKLLNGDAT-VRVPNKKGCTVLWLASAGGALSSCPILVSSVADAD----QQDNRTN 1061 (2131)
T ss_pred CC---CcCCccceeecCCCchhhhHHhhCCccc-eecccCCCCcccchhccCCccccchHHhhcccChh----hhhcccc
Confidence 31 1237999999999999999999998888 79999999999999999999999999999999988 6999999
Q ss_pred cHHHHHHHcCCCCCCCCCC
Q 007858 354 NLLHLAAQYSNPKPISKVP 372 (587)
Q Consensus 354 TpLhlA~~~~~~~~~~~l~ 372 (587)
|+++-|.+.|+.++|++..
T Consensus 1062 S~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1062 SRTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred cccHHHHHhchhheecccc
Confidence 9999999999999998763
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=187.66 Aligned_cols=269 Identities=18% Similarity=0.125 Sum_probs=214.9
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
++..-..+..++..|-.+--..+. ..... ..+..|+.-+-.|.+.|+.+++...+... ++-+...+.+|..++
T Consensus 28 ns~q~a~~~~~~~m~~t~p~~~l~-~~~s~----~~~~lge~~~~~~~~s~nsd~~v~s~~~~--~~~~~~t~p~g~~~~ 100 (296)
T KOG0502|consen 28 NSTQIAELFEQVEMGTTEPRCALT-AEISA----LRNALGESLLTVAVRSGNSDVAVQSAQLD--PDAIDETDPEGWSAL 100 (296)
T ss_pred ChHHHHHHHHHhhccccchhHHHH-HHHHH----HHHhcCCcccchhhhcCCcHHHHHhhccC--CCCCCCCCchhhhhh
Confidence 344455677777777666655555 22221 12566777777888888888888777766 333666777788888
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHH
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQ 198 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~ 198 (587)
|.++-.++.+.+..++.++... +..+--+.+|+.+++...+.+.+..+.+.. ++..|+.|.|||..|+..|+.+++++
T Consensus 101 ~v~ap~~s~~k~sttltN~~rg-nevs~~p~s~~slsVhql~L~~~~~~~~n~-VN~~De~GfTpLiWAaa~G~i~vV~f 178 (296)
T KOG0502|consen 101 LVAAPCGSVDKVSTTLTNGARG-NEVSLMPWSPLSLSVHQLHLDVVDLLVNNK-VNACDEFGFTPLIWAAAKGHIPVVQF 178 (296)
T ss_pred hhcCCCCCcceeeeeecccccC-CccccccCChhhHHHHHHHHHHHHHHhhcc-ccCccccCchHhHHHHhcCchHHHHH
Confidence 8888888888888888888775 777778888888888887777766655444 67788888888888888888888888
Q ss_pred HHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhc
Q 007858 199 LLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLI 278 (587)
Q Consensus 199 Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 278 (587)
||+. |+++....+...|+|.+|++.|. .++++.|++++.++|..+.
T Consensus 179 LL~~--GAdp~~lgk~resALsLAt~ggy----------------------------tdiV~lLL~r~vdVNvyDw---- 224 (296)
T KOG0502|consen 179 LLNS--GADPDALGKYRESALSLATRGGY----------------------------TDIVELLLTREVDVNVYDW---- 224 (296)
T ss_pred HHHc--CCChhhhhhhhhhhHhHHhcCCh----------------------------HHHHHHHHhcCCCcceecc----
Confidence 8887 88888888888899999998886 8999999999988887765
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHH
Q 007858 279 SKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLH 357 (587)
Q Consensus 279 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh 357 (587)
+|-|||.+|++.|+.++++.|++.|++ +++.|..|++++..|+..|+. +|+.++++-+++. .+|+.-.||+|
T Consensus 225 -NGgTpLlyAvrgnhvkcve~Ll~sGAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl----~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 225 -NGGTPLLYAVRGNHVKCVESLLNSGAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKL----CQDSEKRTPLH 296 (296)
T ss_pred -CCCceeeeeecCChHHHHHHHHhcCCC-cccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHH----hhcccCCCCCC
Confidence 889999999999999999999999999 689999999999999999988 8888888766654 69999999986
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=232.72 Aligned_cols=179 Identities=18% Similarity=0.205 Sum_probs=133.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHH
Q 007858 110 QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSI 188 (587)
Q Consensus 110 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~ 188 (587)
.+..+.++||.||..|+.++++.|++.|+++ +..|.+|.||||+|+..|+.+++++|+++++ .+..|.+|.||||.|+
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI 599 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 3445667777777777777777777777774 7777777777777777777777777777766 4444555555555555
Q ss_pred HhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhc
Q 007858 189 ETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK 268 (587)
Q Consensus 189 ~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~ 268 (587)
..|+.++++.|++. +..
T Consensus 600 ~~g~~~iv~~L~~~---------------------------------------------------------------~~~ 616 (823)
T PLN03192 600 SAKHHKIFRILYHF---------------------------------------------------------------ASI 616 (823)
T ss_pred HhCCHHHHHHHHhc---------------------------------------------------------------Ccc
Confidence 55555555444433 221
Q ss_pred cchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhc
Q 007858 269 STHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYV 348 (587)
Q Consensus 269 ~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~ 348 (587)
.+. ..|.++||.|+..|+.++++.|+++|++ ++.+|.+|+||||+|+..|+.+++++|+++|++++ .+
T Consensus 617 ~~~-------~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~----~~ 684 (823)
T PLN03192 617 SDP-------HAAGDLLCTAAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD----KA 684 (823)
T ss_pred cCc-------ccCchHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC----CC
Confidence 111 1346899999999999999999999999 69999999999999999999999999999999876 68
Q ss_pred cCCC-CcHHHHHHHcCC
Q 007858 349 DVSG-NNLLHLAAQYSN 364 (587)
Q Consensus 349 d~~G-~TpLhlA~~~~~ 364 (587)
|.+| .||++++.....
T Consensus 685 ~~~g~~t~~~l~~~~~~ 701 (823)
T PLN03192 685 NTDDDFSPTELRELLQK 701 (823)
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 8888 999998876443
|
|
| >PF13962 PGG: Domain of unknown function | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=175.30 Aligned_cols=109 Identities=37% Similarity=0.608 Sum_probs=96.1
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhhcCCCCCCCCC---CCCccccCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007858 423 EKWMKSRAESCSIVATLATAGVFQAAFTPPGGNKDG---EGTPNFHSKI-WFHIFVMSEAIAFSCSCISMLMFLSILITS 498 (587)
Q Consensus 423 ~~~~~~~~~~~~vva~Liatv~faa~~t~Pgg~~~~---~G~~~~~~~~-~f~~F~~~~~~a~~~S~~~~~~~~~~~~~~ 498 (587)
+||++++++++++||+|||||||+|+||||||++++ .|+|++.+++ .|++|+++|++||++|+++++++++ -
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~-~--- 76 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLIS-G--- 76 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHH-H---
Confidence 368999999999999999999999999999999775 7999999888 9999999999999999999988763 2
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 007858 499 RYRENDFLKRLPFKLTFGLLTLFIALATMMLSFSSSFFLA 538 (587)
Q Consensus 499 ~~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~v 538 (587)
. .++.+..+..+.++..++++++.+|++||++|+|+|
T Consensus 77 -~--~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 77 -L--DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred -h--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 1 344455566778899999999999999999999976
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9e-24 Score=215.68 Aligned_cols=212 Identities=20% Similarity=0.227 Sum_probs=166.6
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
-++.+|.|+||.|+.+|+.++++.|+ ++...+... +..|.+|||+|++.|+.++|+.++..+ .. +|..+..|.|
T Consensus 44 ~qd~~gfTalhha~Lng~~~is~lll--e~ea~ldl~-d~kg~~plhlaaw~g~~e~vkmll~q~--d~-~na~~~e~~t 117 (854)
T KOG0507|consen 44 LQDYSGFTLLHHAVLNGQNQISKLLL--DYEALLDLC-DTKGILPLHLAAWNGNLEIVKMLLLQT--DI-LNAVNIENET 117 (854)
T ss_pred ccCccchhHHHHHHhcCchHHHHHHh--cchhhhhhh-hccCcceEEehhhcCcchHHHHHHhcc--cC-CCcccccCcC
Confidence 45779999999999999999999999 666666666 789999999999999999999999997 55 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CC--------CCCCCCchHHHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DN--------LEPDDLENTFFVS 187 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~--------~~~~~g~t~l~~a 187 (587)
|||.|+..||.+++.+|+.+|++ +.++|..+.|+|.+|++.|..++++.|++..- .. .++..+.+++|.|
T Consensus 118 plhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHla 196 (854)
T KOG0507|consen 118 PLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLA 196 (854)
T ss_pred ccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchh
Confidence 99999999999999999999999 69999999999999999999999999998732 11 1223334455555
Q ss_pred HHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhh
Q 007858 188 IETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS 267 (587)
Q Consensus 188 ~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~ 267 (587)
+++|+.++++. |++.|.
T Consensus 197 akngh~~~~~~---------------------------------------------------------------ll~ag~ 213 (854)
T KOG0507|consen 197 AKNGHVECMQA---------------------------------------------------------------LLEAGF 213 (854)
T ss_pred hhcchHHHHHH---------------------------------------------------------------HHhcCC
Confidence 55555555444 444454
Q ss_pred ccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHc
Q 007858 268 KSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325 (587)
Q Consensus 268 ~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 325 (587)
++|... +.-|+||.|+.+|..++++.|++.|-. ...+|.+|+|+|.+-...
T Consensus 214 din~~t------~~gtalheaalcgk~evvr~ll~~gin-~h~~n~~~qtaldil~d~ 264 (854)
T KOG0507|consen 214 DINYTT------EDGTALHEAALCGKAEVVRFLLEIGIN-THIKNQHGQTALDIIIDL 264 (854)
T ss_pred Cccccc------ccchhhhhHhhcCcchhhhHHHhhccc-cccccccchHHHHHHHhc
Confidence 444332 125777777777777777777777766 567777777777765543
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=224.75 Aligned_cols=176 Identities=15% Similarity=0.083 Sum_probs=161.2
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+.++.++||.||..|+.+.++.|+ +.+.+++.. |.+|.||||+|+..|+.++++.|+++| ++ ++.+|.+|+||
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll--~~G~d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~g--ad-in~~d~~G~Tp 594 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELL--KAKLDPDIG-DSKGRTPLHIAASKGYEDCVLVLLKHA--CN-VHIRDANGNTA 594 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHcChHHHHHHHHhcC--CC-CCCcCCCCCCH
Confidence 3445679999999999999999999 788999987 999999999999999999999999998 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
||+|+..||.+++++|++.++.. ....|.+|||.|+..|+.+++++|+++++ ++..|.+|.||||.|+..|+.+++
T Consensus 595 L~~A~~~g~~~iv~~L~~~~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv 671 (823)
T PLN03192 595 LWNAISAKHHKIFRILYHFASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMV 671 (823)
T ss_pred HHHHHHhCCHHHHHHHHhcCccc---CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 99999999999999999887653 23567799999999999999999999999 888999999999999999999999
Q ss_pred HHHHHhcccccccccccCC-chHHHHHhh
Q 007858 197 LQLLKKNKKLLAGATHAKY-GTAMHMLAR 224 (587)
Q Consensus 197 ~~Ll~~~~~~~~~~~d~~g-~t~Lh~a~~ 224 (587)
+.|+++ +++++..|..| .||++.+..
T Consensus 672 ~~Ll~~--GAdv~~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 672 RLLIMN--GADVDKANTDDDFSPTELREL 698 (823)
T ss_pred HHHHHc--CCCCCCCCCCCCCCHHHHHHH
Confidence 999998 89999999888 888877643
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=198.96 Aligned_cols=235 Identities=21% Similarity=0.232 Sum_probs=177.7
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
..--.+..|+..|+.+.+..|+ ..+..++.. +.+|.|+||-+|...+.+||++|++++ ++ +|..|..|+||||.
T Consensus 39 ~~sa~~l~A~~~~d~~ev~~ll--~~ga~~~~~-n~DglTalhq~~id~~~e~v~~l~e~g--a~-Vn~~d~e~wtPlha 112 (527)
T KOG0505|consen 39 EDSAVFLEACSRGDLEEVRKLL--NRGASPNLC-NVDGLTALHQACIDDNLEMVKFLVENG--AN-VNAQDNEGWTPLHA 112 (527)
T ss_pred CchHHHHhccccccHHHHHHHh--ccCCCcccc-CCccchhHHHHHhcccHHHHHHHHHhc--CC-ccccccccCCcchh
Confidence 3344577789999999999999 666777776 999999999999999999999999999 88 99999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHH
Q 007858 121 AAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLL 200 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 200 (587)
|+..||..++++|+..|+++ ...|.+|..|+..+..--..++...-.....
T Consensus 113 aascg~~~i~~~li~~gA~~-~avNsdg~~P~dl~e~ea~~~~l~~~~~r~g---------------------------- 163 (527)
T KOG0505|consen 113 AASCGYLNIVEYLIQHGANL-LAVNSDGNMPYDLAEDEATLDVLETEMARQG---------------------------- 163 (527)
T ss_pred hcccccHHHHHHHHHhhhhh-hhccCCCCCccccccCcchhHHHHHHHHHhc----------------------------
Confidence 99999999999999999996 7788889888877654433333322221111
Q ss_pred HhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccC
Q 007858 201 KKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISK 280 (587)
Q Consensus 201 ~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 280 (587)
-+ +. +++.- .....++=+...+..|...+.... .
T Consensus 164 ---------------i~-ie-a~R~~------------------------~e~~ml~D~~q~l~~G~~~d~~~~-----r 197 (527)
T KOG0505|consen 164 ---------------ID-IE-AARKA------------------------EEQTMLDDARQWLNAGAELDARHA-----R 197 (527)
T ss_pred ---------------cc-HH-HHhhh------------------------hHHHHHHHHHHHHhcccccccccc-----c
Confidence 00 00 00000 000012222233334444443332 3
Q ss_pred CChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHH
Q 007858 281 PSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAA 360 (587)
Q Consensus 281 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~ 360 (587)
|.|.||+|+.+|..++.++|++.+.+ ++.+|.+|+||||.|+-.|+.++.++|+++|++.+ ++...|.||+.+|.
T Consensus 198 G~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d----~~t~~g~~p~dv~d 272 (527)
T KOG0505|consen 198 GATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD----AKTKMGETPLDVAD 272 (527)
T ss_pred cchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHhHHHHHHHhhcccc----hhhhcCCCCccchh
Confidence 78999999999999999999999998 68999999999999999999999999999999876 68889999998886
Q ss_pred H
Q 007858 361 Q 361 (587)
Q Consensus 361 ~ 361 (587)
.
T Consensus 273 e 273 (527)
T KOG0505|consen 273 E 273 (527)
T ss_pred h
Confidence 5
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-22 Score=195.44 Aligned_cols=233 Identities=19% Similarity=0.164 Sum_probs=167.6
Q ss_pred CCcccccceeecCCCCCCCCCCcCCC---CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHH
Q 007858 10 PASQQEISISITGRDPANSVQPLQND---KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVAT 86 (587)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~ 86 (587)
..+.....-++.+.|....-.++..+ +..+.+|.|+||.++...+.++|++++ +.++++|.. |..|+||||.|+
T Consensus 38 f~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~--e~ga~Vn~~-d~e~wtPlhaaa 114 (527)
T KOG0505|consen 38 FEDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLV--ENGANVNAQ-DNEGWTPLHAAA 114 (527)
T ss_pred CCchHHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHH--HhcCCcccc-ccccCCcchhhc
Confidence 33344444555555655555555443 355779999999999999999999999 899999998 999999999999
Q ss_pred hcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh-CChHHHH
Q 007858 87 GAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF-GQSKMAS 165 (587)
Q Consensus 87 ~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~-g~~~~v~ 165 (587)
.+||..++++|+..| ++ +...|.+|..|+-.+...--.++...-... .|.+ + -|++. ....+.+
T Consensus 115 scg~~~i~~~li~~g--A~-~~avNsdg~~P~dl~e~ea~~~~l~~~~~r----------~gi~-i-ea~R~~~e~~ml~ 179 (527)
T KOG0505|consen 115 SCGYLNIVEYLIQHG--AN-LLAVNSDGNMPYDLAEDEATLDVLETEMAR----------QGID-I-EAARKAEEQTMLD 179 (527)
T ss_pred ccccHHHHHHHHHhh--hh-hhhccCCCCCccccccCcchhHHHHHHHHH----------hccc-H-HHHhhhhHHHHHH
Confidence 999999999999999 88 888999999999887654444443333222 2222 1 12221 1111111
Q ss_pred HHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhh
Q 007858 166 FLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFI 245 (587)
Q Consensus 166 ~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
+ +...+.. +......+..|.|.||.|+.+|+
T Consensus 180 ----------------------------D-~~q~l~~--G~~~d~~~~rG~T~lHvAaa~Gy------------------ 210 (527)
T KOG0505|consen 180 ----------------------------D-ARQWLNA--GAELDARHARGATALHVAAANGY------------------ 210 (527)
T ss_pred ----------------------------H-HHHHHhc--cccccccccccchHHHHHHhhhH------------------
Confidence 1 1111112 44444555557788888877776
Q ss_pred hccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHc
Q 007858 246 TNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325 (587)
Q Consensus 246 ~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 325 (587)
.++.++|++.|.+++.++. +|+||||.|+..|+.++++.|++++++ .+..+..|+||+.+|...
T Consensus 211 ----------~e~~~lLl~ag~~~~~~D~-----dgWtPlHAAA~Wg~~~~~elL~~~ga~-~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 211 ----------TEVAALLLQAGYSVNIKDY-----DGWTPLHAAAHWGQEDACELLVEHGAD-MDAKTKMGETPLDVADEE 274 (527)
T ss_pred ----------HHHHHHHHHhccCcccccc-----cCCCcccHHHHhhhHhHHHHHHHhhcc-cchhhhcCCCCccchhhh
Confidence 7777888888877776665 788999999999999999999999999 688889999999988763
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=184.24 Aligned_cols=158 Identities=18% Similarity=0.246 Sum_probs=141.0
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhc-----CCHHHHHHHHHccCCCCccccCC-
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGA-----KQTNFVKQMVELTGHDNLLSLQD- 111 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~-----g~~~iv~~Ll~~~~~~~ll~~~d- 111 (587)
-|.+|+|+||+|+.++|.++|+.|| +..-.+++.. |.-|.||+++|+.. .+.++|..|...| | +|.+-
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LL-DSgvC~VD~q-NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg---n-VNaKAs 337 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILL-DSGVCDVDQQ-NRAGYTPVMLAALAKLKQPADRTVVERLFKMG---D-VNAKAS 337 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHh-ccCccccccc-ccccccHHHHHHHHhhcchhhHHHHHHHHhcc---C-cchhhh
Confidence 4789999999999999999999999 6667788877 89999999998864 4788999999886 5 67664
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC--CCCCCCCCchHHHHHHH
Q 007858 112 ENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE--DNLEPDDLENTFFVSIE 189 (587)
Q Consensus 112 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~ 189 (587)
..|+|+|++|+.+|+.++|+.||..|+|+ |++|.+|.|+|++||.+||.|++++|+.... ..+.|.+|.|+|.+|..
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence 56999999999999999999999999997 9999999999999999999999999998877 66799999999999999
Q ss_pred hCcHHHHHHHHHh
Q 007858 190 TGLYGLALQLLKK 202 (587)
Q Consensus 190 ~~~~~~v~~Ll~~ 202 (587)
.|+.|+...|..+
T Consensus 417 agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 417 AGHREIAVMLYAH 429 (452)
T ss_pred cCchHHHHHHHHH
Confidence 9999999888876
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-20 Score=167.81 Aligned_cols=128 Identities=20% Similarity=0.224 Sum_probs=75.3
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhc-----CccchhhhcCCCCCcHHHHHHhcCC----HHHHHHHHHccCCCCcccc
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDD-----HQSMLRAAVTKGYQTILHVATGAKQ----TNFVKQMVELTGHDNLLSL 109 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~~~~~~~~~g~t~Lh~A~~~g~----~~iv~~Ll~~~~~~~ll~~ 109 (587)
+..|.|+||.|+..|+.++++.|+ .. .+.+++.+ |..|.||||+|+..|+ .+++++|++.+ ++ ++.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~-~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g--ad-in~ 92 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFT-PFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELG--AD-INA 92 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHH-HHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcC--CC-CCC
Confidence 445666666666666666666554 21 13445444 5566666666666665 35566666665 55 555
Q ss_pred CCC-CCCcHHHHHHHcCCHHHHHHHHh-cCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 110 QDE-NGNTAFCFAAAVGSVEIAQFMLQ-RNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 110 ~d~-~g~TpLh~Aa~~g~~~iv~~Ll~-~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
+|. .|+||||+|+..++.+++++|++ .|+++ +.+|.+|.||||+|+..++.+++++|++..+
T Consensus 93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~-~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 93 QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL-HFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 553 56666666666666666666665 35553 5566666666666666666666666665543
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-20 Score=165.25 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=109.8
Q ss_pred cCCCChHhHHHHHcCCHH----HHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHH---HHHHHHccCCCCccccCC
Q 007858 39 YSHKCVPLYKAALKGDCN----EAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNF---VKQMVELTGHDNLLSLQD 111 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~----~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~i---v~~Ll~~~~~~~ll~~~d 111 (587)
+.++.++||.||+.|+.+ +++.|+ +.+..++.. |.+|.||||+|+..|+.+. +++|++.| ++ ++.+|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~--~~g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G--ad-in~~d 90 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFIS--GDGHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMG--AD-INARE 90 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHh--hcchhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcC--CC-CCCCC
Confidence 445677899999999984 444454 567777766 8889999999999887654 78999998 88 88887
Q ss_pred -CCCCcHHHHHHHcCCHHHHHHHHh-cCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCC
Q 007858 112 -ENGNTAFCFAAAVGSVEIAQFMLQ-RNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDL 180 (587)
Q Consensus 112 -~~g~TpLh~Aa~~g~~~iv~~Ll~-~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g 180 (587)
..|.||||+|+..|+.+++++|++ .|+++ +.+|..|.||||+|+..++.+++++|+++++ .+.++..|
T Consensus 91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 161 (166)
T PHA02743 91 LGTGNTLLHIAASTKNYELAEWLCRQLGVNL-GAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIG 161 (166)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhccCCCc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCC
Confidence 589999999999999999999995 78885 8889999999999999999999999999887 54444444
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-19 Score=184.64 Aligned_cols=90 Identities=21% Similarity=0.274 Sum_probs=81.3
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHH
Q 007858 279 SKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHL 358 (587)
Q Consensus 279 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhl 358 (587)
..|+.||-.||..++.|++++|+++++| ++.+|++|+|.||..+.+-..++.++++++|++. +...+|++|-|||-+
T Consensus 238 YfGEyPLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~--l~~v~N~qgLTPLtL 314 (782)
T KOG3676|consen 238 YFGEYPLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA--LEHVRNNQGLTPLTL 314 (782)
T ss_pred eeccCchHHHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc--cccccccCCCChHHH
Confidence 3588999999999999999999999999 7999999999999999999999999999999981 233699999999999
Q ss_pred HHHcCCCCCCCCC
Q 007858 359 AAQYSNPKPISKV 371 (587)
Q Consensus 359 A~~~~~~~~~~~l 371 (587)
|++.|+.++.+.+
T Consensus 315 AaklGk~emf~~i 327 (782)
T KOG3676|consen 315 AAKLGKKEMFQHI 327 (782)
T ss_pred HHHhhhHHHHHHH
Confidence 9999997765544
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-20 Score=174.93 Aligned_cols=153 Identities=18% Similarity=0.169 Sum_probs=138.8
Q ss_pred hhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc-----CCHHHHHHHHhcCCcccccC
Q 007858 70 LRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV-----GSVEIAQFMLQRNPNLLTIR 144 (587)
Q Consensus 70 ~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~-----g~~~iv~~Ll~~~~~l~~~~ 144 (587)
+|.. |.+|+|+||+|+.++++++|+.||+.| -++ ++.+|..|.||+++++.. .+.++|..|...|. +.-..
T Consensus 261 VNla-DsNGNTALHYsVSHaNF~VV~~LLDSg-vC~-VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgn-VNaKA 336 (452)
T KOG0514|consen 261 VNLA-DSNGNTALHYAVSHANFDVVSILLDSG-VCD-VDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGD-VNAKA 336 (452)
T ss_pred hhhh-cCCCCeeeeeeecccchHHHHHHhccC-ccc-ccccccccccHHHHHHHHhhcchhhHHHHHHHHhccC-cchhh
Confidence 4555 899999999999999999999999998 677 999999999999999864 47789999998764 33445
Q ss_pred CCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHh
Q 007858 145 GGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLA 223 (587)
Q Consensus 145 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~ 223 (587)
.+.|+|+|++|+.+|+.++|+.|+..++ +|++|.+|.|+|..|++.|+.|+++.||.. -..+....|.+|.|+|..|.
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~-p~cd~sLtD~DgSTAl~IAl 415 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV-PSCDISLTDVDGSTALSIAL 415 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc-CcccceeecCCCchhhhhHH
Confidence 6789999999999999999999999999 999999999999999999999999999998 56777889999999999999
Q ss_pred hCCC
Q 007858 224 RNPS 227 (587)
Q Consensus 224 ~~~~ 227 (587)
..|+
T Consensus 416 eagh 419 (452)
T KOG0514|consen 416 EAGH 419 (452)
T ss_pred hcCc
Confidence 9997
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=163.32 Aligned_cols=144 Identities=12% Similarity=0.023 Sum_probs=125.5
Q ss_pred CccchhhhcCCCCCcHHHHHHhcCCH----HHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHH---HHHHHhcCC
Q 007858 66 HQSMLRAAVTKGYQTILHVATGAKQT----NFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEI---AQFMLQRNP 138 (587)
Q Consensus 66 ~~~~~~~~~~~~g~t~Lh~A~~~g~~----~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~i---v~~Ll~~~~ 138 (587)
++.+++.. +.++.++||.||+.|+. +++++|++.+ .. ++.+|..|.||||+|+..|+.+. +++|++.|+
T Consensus 9 ~~~~~~~~-~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g--~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga 84 (166)
T PHA02743 9 NNLGAVEI-DEDEQNTFLRICRTGNIYELMEVAPFISGDG--HL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA 84 (166)
T ss_pred cchHHhhh-ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc--hh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC
Confidence 45566666 77889999999999998 5666777777 67 88999999999999999988654 899999999
Q ss_pred cccccCC-CCCCcHHHHHHHhCChHHHHHHhh-cCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCC
Q 007858 139 NLLTIRG-GGQMTPLYIAALFGQSKMASFLYR-QNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKY 215 (587)
Q Consensus 139 ~l~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~-~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g 215 (587)
++ +.++ ..|.||||+|+..|+.+++++|++ .++ .+..+..|.||||+|+..++.++++.|+++ ++..+.++..|
T Consensus 85 di-n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~ 161 (166)
T PHA02743 85 DI-NARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRAN--GAVCDDPLSIG 161 (166)
T ss_pred CC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcccCC
Confidence 96 8887 589999999999999999999995 677 778999999999999999999999999997 77777777766
Q ss_pred c
Q 007858 216 G 216 (587)
Q Consensus 216 ~ 216 (587)
.
T Consensus 162 ~ 162 (166)
T PHA02743 162 L 162 (166)
T ss_pred c
Confidence 4
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=151.30 Aligned_cols=144 Identities=22% Similarity=0.230 Sum_probs=127.9
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
-+.+|+..|....|+.|| ++.+..+|.+ |.+|.||||.|+.+||.+||+.|+..| ++ .+.+...|+||||.||..
T Consensus 66 l~lwaae~nrl~eV~~lL-~e~an~vNtr-D~D~YTpLHRAaYn~h~div~~ll~~g--An-~~a~T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLL-SEKANHVNTR-DEDEYTPLHRAAYNGHLDIVHELLLSG--AN-KEAKTNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHHhhccHHHHHHHH-Hhcccccccc-ccccccHHHHHHhcCchHHHHHHHHcc--CC-cccccccCccchhhhhcc
Confidence 367899999999999999 8888888988 999999999999999999999999999 88 999999999999999999
Q ss_pred CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCCh-HHHHHHhhcCC--CCCCCCCCchHHHHHHHhCcHH
Q 007858 125 GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQS-KMASFLYRQNE--DNLEPDDLENTFFVSIETGLYG 194 (587)
Q Consensus 125 g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~~~~~~ 194 (587)
++.+++-.|+++|+++ +.......||||+||...+. ..+.+|+.... +...+..+.|++.+|-+.+...
T Consensus 141 nN~~va~~LLqhgaDV-nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~ 212 (228)
T KOG0512|consen 141 NNFEVAGRLLQHGADV-NAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSH 212 (228)
T ss_pred cchhHHHHHHhccCcc-cccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhH
Confidence 9999999999999997 88888899999999988764 55666665554 6668888999999998876543
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=161.85 Aligned_cols=126 Identities=16% Similarity=0.172 Sum_probs=113.9
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcc----CCCCccccCCCCCCcHHHHHHHcCC----HHHHHHHHhcCCcccccCCC
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELT----GHDNLLSLQDENGNTAFCFAAAVGS----VEIAQFMLQRNPNLLTIRGG 146 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~----~~~~ll~~~d~~g~TpLh~Aa~~g~----~~iv~~Ll~~~~~l~~~~~~ 146 (587)
+..|.||||+|++.|+.++++.|+... ...+ ++.+|..|.||||+|+..|+ .+++++|++.|+++ +.++.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n~~~~ 95 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-NAQEM 95 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-CCCCc
Confidence 788999999999999999999986531 1266 88999999999999999999 58999999999996 87885
Q ss_pred -CCCcHHHHHHHhCChHHHHHHhhc-CC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 147 -GQMTPLYIAALFGQSKMASFLYRQ-NE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 147 -~g~tpL~~A~~~g~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
+|.||||+|+..++.+++++|++. +. .+..+.+|.||||.|+..++.++++.|++.
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREI 154 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence 899999999999999999999974 66 788899999999999999999999999987
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-19 Score=170.65 Aligned_cols=150 Identities=12% Similarity=0.120 Sum_probs=128.5
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhc---CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccC-CCCCC
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAV---TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQ-DENGN 115 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~---~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~-d~~g~ 115 (587)
....++||.|+..|+.++++.|+ ++|++++.+. +..|.||||+|+..|+.+++++|+++| ++ ++.+ +..|.
T Consensus 31 ~~~~~lL~~A~~~~~~eivk~LL--~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G--AD-VN~~~~~~g~ 105 (300)
T PHA02884 31 ICIANILYSSIKFHYTDIIDAIL--KLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG--AD-VNRYAEEAKI 105 (300)
T ss_pred CCCCHHHHHHHHcCCHHHHHHHH--HCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-cCcccCCCCC
Confidence 34466788889999999999999 7899998762 358999999999999999999999999 88 8886 56899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|++.++.+++..+...+ .+..+.+|.+.+ ++.++
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdi-n~kd~~G~TpL~~A~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADI-NIQTNDMVTPIELALMICNNFLAFMICDNE----ISNFYKHPKKIL---INFDI 177 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHhCChhHHHHhcCCc----ccccccChhhhh---ccHHH
Confidence 9999999999999999999999996 899999999999999999998886665332 355667777765 46899
Q ss_pred HHHHHHh
Q 007858 196 ALQLLKK 202 (587)
Q Consensus 196 v~~Ll~~ 202 (587)
++.|+.+
T Consensus 178 ~~~Lish 184 (300)
T PHA02884 178 LKILVSH 184 (300)
T ss_pred HHHHHHH
Confidence 9999887
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=160.82 Aligned_cols=131 Identities=16% Similarity=0.208 Sum_probs=108.2
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHh---hcCccchhhhcCCCCCcHHHHHHhcCCH---HHHHHHHHccCCCCccccC
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILG---DDHQSMLRAAVTKGYQTILHVATGAKQT---NFVKQMVELTGHDNLLSLQ 110 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~---~~~~~~~~~~~~~~g~t~Lh~A~~~g~~---~iv~~Ll~~~~~~~ll~~~ 110 (587)
..+..|.||||+|++.|+...+....+ +..+..++.. |.+|.||||+|+..|+. +++++|++.| ++ ++.+
T Consensus 12 ~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g--ad-in~~ 87 (154)
T PHA02736 12 EPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEY-NRHGKQCVHIVSNPDKADPQEKLKLLMEWG--AD-INGK 87 (154)
T ss_pred hcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHh-cCCCCEEEEeecccCchhHHHHHHHHHHcC--CC-cccc
Confidence 456789999999999999533222110 1112233444 88999999999999987 4688999999 88 8888
Q ss_pred C-CCCCcHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 111 D-ENGNTAFCFAAAVGSVEIAQFMLQR-NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 111 d-~~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
| ..|+||||+|++.|+.+++++|+++ |+++ +.+|..|.||||+|+..|+.+++++|++.++
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNM-EILNYAFKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC-ccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8 4899999999999999999999984 8885 8999999999999999999999999999886
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=167.39 Aligned_cols=151 Identities=16% Similarity=0.247 Sum_probs=129.3
Q ss_pred CCCCCc-HHHHHHhcCCHHHHHHHHHccCCCCccccC----CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccC-CCCC
Q 007858 75 TKGYQT-ILHVATGAKQTNFVKQMVELTGHDNLLSLQ----DENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIR-GGGQ 148 (587)
Q Consensus 75 ~~~g~t-~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~----d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~-~~~g 148 (587)
|..|.| +||.|+..|+.+++++|+++| ++ ++.+ +..|.||||+|++.|+.+++++|+++|+++ +.+ +..|
T Consensus 29 d~~~~~~lL~~A~~~~~~eivk~LL~~G--Ad-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~~~~g 104 (300)
T PHA02884 29 NKICIANILYSSIKFHYTDIIDAILKLG--AD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYAEEAK 104 (300)
T ss_pred CcCCCCHHHHHHHHcCCHHHHHHHHHCC--CC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-CcccCCCC
Confidence 555555 677778889999999999999 88 7776 468999999999999999999999999996 765 5689
Q ss_pred CcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 149 MTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.||||.|+..|+.+++++|++.++ .+..+.+|.||||.|+..+..+++..+... ..+..+.+|++++. +
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---n 174 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN-------EISNFYKHPKKILI---N 174 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC-------cccccccChhhhhc---c
Confidence 999999999999999999999999 888999999999999998888877555433 35667788888752 2
Q ss_pred CcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhh
Q 007858 228 AFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS 267 (587)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~ 267 (587)
.++++.|+.++.
T Consensus 175 ----------------------------~ei~~~Lish~v 186 (300)
T PHA02884 175 ----------------------------FDILKILVSHFI 186 (300)
T ss_pred ----------------------------HHHHHHHHHHHH
Confidence 789999998887
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-18 Score=142.24 Aligned_cols=142 Identities=19% Similarity=0.199 Sum_probs=128.5
Q ss_pred HHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCC
Q 007858 81 ILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ 160 (587)
Q Consensus 81 ~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~ 160 (587)
-+.+|+..+....|+.|++.. ++.+|.+|.+|.||||-|+.+||.+||+.|+..|++. +.+...|+||||-||.-++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~--an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEK--ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhc--cccccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccc
Confidence 467899999999999999998 8889999999999999999999999999999999995 9999999999999999999
Q ss_pred hHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc-HHHHHHHHHhcccccccccccCCchHHHHHhhCC
Q 007858 161 SKMASFLYRQNE-DNLEPDDLENTFFVSIETGL-YGLALQLLKKNKKLLAGATHAKYGTAMHMLARNP 226 (587)
Q Consensus 161 ~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~-~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~ 226 (587)
.+++.+|+++++ ++.......||||+|+...+ ...+.+|+.. ....+..++..+.||+..|-+.+
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~d-ryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHD-RYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhc-cccChhhhcCccchHHHHHHHhh
Confidence 999999999999 88888889999999998766 4556666665 56677788889999999998876
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-18 Score=151.52 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=105.4
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccC--C--CCccccCCCCCCcHHHHHHHcCCH---HHHHHHHhcCCcccccCC-C
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTG--H--DNLLSLQDENGNTAFCFAAAVGSV---EIAQFMLQRNPNLLTIRG-G 146 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~--~--~~ll~~~d~~g~TpLh~Aa~~g~~---~iv~~Ll~~~~~l~~~~~-~ 146 (587)
|.+|.||||+|++.|+. ++.+...+. . ..+++.+|.+|.||||+|+..|+. +++++|++.|+++ +.++ .
T Consensus 14 d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~~~ 90 (154)
T PHA02736 14 DIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKERV 90 (154)
T ss_pred CCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-cccCCC
Confidence 88899999999999984 333332220 0 112456799999999999999987 4689999999996 7787 5
Q ss_pred CCCcHHHHHHHhCChHHHHHHhhc-CC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 147 GQMTPLYIAALFGQSKMASFLYRQ-NE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
+|.||||+|+..|+.+++++|+++ +. .+..+..|.||||+|+..++.++++.|++.
T Consensus 91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ 148 (154)
T PHA02736 91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK 148 (154)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999999999999985 66 788999999999999999999999999987
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-18 Score=158.10 Aligned_cols=132 Identities=20% Similarity=0.213 Sum_probs=97.8
Q ss_pred HHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHH
Q 007858 50 ALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEI 129 (587)
Q Consensus 50 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~i 129 (587)
|+.|+.-.|+.-| ++...++|.. |..|.+|||+||+.||..+|+.|+.+| +. +|..|....||||+|+..||.++
T Consensus 8 cregna~qvrlwl-d~tehdln~g-ddhgfsplhwaakegh~aivemll~rg--ar-vn~tnmgddtplhlaaahghrdi 82 (448)
T KOG0195|consen 8 CREGNAFQVRLWL-DDTEHDLNVG-DDHGFSPLHWAAKEGHVAIVEMLLSRG--AR-VNSTNMGDDTPLHLAAAHGHRDI 82 (448)
T ss_pred hhcCCeEEEEEEe-cCcccccccc-cccCcchhhhhhhcccHHHHHHHHhcc--cc-cccccCCCCcchhhhhhcccHHH
Confidence 4455554555555 5666666666 777777888888888888888877777 66 77777777778888877788888
Q ss_pred HHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 007858 130 AQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVS 187 (587)
Q Consensus 130 v~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a 187 (587)
|+.|++..+++ +..|..|.|||||||.-|.-.+++-|+..|+ +++.+++|.||+..|
T Consensus 83 vqkll~~kadv-navnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 83 VQKLLSRKADV-NAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHHHHHHhccc-chhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 87777777775 7777777888888887777777777777777 777777777777655
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-17 Score=149.35 Aligned_cols=112 Identities=24% Similarity=0.321 Sum_probs=105.5
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.|..|.+|||+||+.|+..+++.|+ ..++.+|.. +...+||||+|+..||.++|+.|+++. +| +|..|+.|+||
T Consensus 30 gddhgfsplhwaakegh~aivemll--~rgarvn~t-nmgddtplhlaaahghrdivqkll~~k--ad-vnavnehgntp 103 (448)
T KOG0195|consen 30 GDDHGFSPLHWAAKEGHVAIVEMLL--SRGARVNST-NMGDDTPLHLAAAHGHRDIVQKLLSRK--AD-VNAVNEHGNTP 103 (448)
T ss_pred ccccCcchhhhhhhcccHHHHHHHH--hcccccccc-cCCCCcchhhhhhcccHHHHHHHHHHh--cc-cchhhccCCCc
Confidence 4678999999999999999999999 788889877 777899999999999999999999998 99 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
|||||..|...+++-|+..|+.+ ++.|++|.|||..|-
T Consensus 104 lhyacfwgydqiaedli~~ga~v-~icnk~g~tpldkak 141 (448)
T KOG0195|consen 104 LHYACFWGYDQIAEDLISCGAAV-NICNKKGMTPLDKAK 141 (448)
T ss_pred hhhhhhhcHHHHHHHHHhcccee-eecccCCCCchhhhc
Confidence 99999999999999999999996 999999999999774
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-16 Score=125.51 Aligned_cols=85 Identities=31% Similarity=0.430 Sum_probs=54.3
Q ss_pred hHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcC
Q 007858 46 LYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVG 125 (587)
Q Consensus 46 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g 125 (587)
||.|++.|+.++++.|+ + .+.+++. |+||||+|+..|+.+++++|++.+ ++ ++.+|..|+||||+|+.+|
T Consensus 1 L~~A~~~~~~~~~~~ll-~-~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLL-E-KGADINL-----GNTALHYAAENGNLEIVKLLLENG--AD-INSQDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHH-H-TTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTT--TC-TT-BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHH-H-CcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhc--cc-ccccCCCCCCHHHHHHHcC
Confidence 56677777777777766 2 4433321 666777777777777777777666 56 6666666777777777777
Q ss_pred CHHHHHHHHhcCCcc
Q 007858 126 SVEIAQFMLQRNPNL 140 (587)
Q Consensus 126 ~~~iv~~Ll~~~~~l 140 (587)
+.+++++|+++|+++
T Consensus 71 ~~~~~~~Ll~~g~~~ 85 (89)
T PF12796_consen 71 NLEIVKLLLEHGADV 85 (89)
T ss_dssp HHHHHHHHHHTTT-T
T ss_pred CHHHHHHHHHcCCCC
Confidence 777777777666664
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=130.16 Aligned_cols=123 Identities=25% Similarity=0.376 Sum_probs=86.1
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
+..|.||||.|+..|+.+.++.|+ +.+.+.+.. +..|.||||.|+..++.+++++|++.+ .+ ++..+..|.||+
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li--~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~-~~~~~~~~~~~l 77 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLL--ENGADVNAK-DNDGRTPLHLAAKNGHLEIVKLLLEKG--AD-VNARDKDGNTPL 77 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHH--HcCCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcC--CC-ccccCCCCCCHH
Confidence 355677777777777777777777 444444444 667777777777777777777777776 55 666667777777
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHh
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY 168 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (587)
|+|++.++.+++++|++++.+. +..+..|.||+++|...++.+++++|+
T Consensus 78 ~~a~~~~~~~~~~~L~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 78 HLAARNGNLDVVKLLLKHGADV-NARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 7777777777777777777664 666677777777777777777777663
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-16 Score=124.44 Aligned_cols=83 Identities=27% Similarity=0.431 Sum_probs=76.8
Q ss_pred HHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCCh
Q 007858 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQS 161 (587)
Q Consensus 82 Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~ 161 (587)
||+|++.|+.+++++|++.+ .+ ++. |+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+.+|+.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~--~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~ 72 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG--AD-INL----GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNL 72 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT--ST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHH
T ss_pred CHHHHHcCCHHHHHHHHHCc--CC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCH
Confidence 79999999999999999987 55 444 999999999999999999999999996 89999999999999999999
Q ss_pred HHHHHHhhcCC
Q 007858 162 KMASFLYRQNE 172 (587)
Q Consensus 162 ~~v~~Ll~~~~ 172 (587)
+++++|+++++
T Consensus 73 ~~~~~Ll~~g~ 83 (89)
T PF12796_consen 73 EIVKLLLEHGA 83 (89)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHcCC
Confidence 99999999987
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=158.33 Aligned_cols=188 Identities=15% Similarity=0.144 Sum_probs=159.3
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcC--------ccchhhhcCCCCCcHHHHHHh---cCCHHHHHHHHHccCCCCcccc--
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDH--------QSMLRAAVTKGYQTILHVATG---AKQTNFVKQMVELTGHDNLLSL-- 109 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~--------~~~~~~~~~~~g~t~Lh~A~~---~g~~~iv~~Ll~~~~~~~ll~~-- 109 (587)
+.++..|...|..+....++ ... ..+++.+ ...|+|.||.|.- .++.++++.|++.. +.++|.
T Consensus 102 ~~~~~~~~~~~~l~~l~~l~-~~~~~~k~r~~~w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~--p~lind~~ 177 (782)
T KOG3676|consen 102 RDALFIADSEGALSDLDGLL-KFLRKSKYRLTDWKLNER-GATGETLLHKALLNLSDGHNELARVLLEIF--PKLINDIY 177 (782)
T ss_pred hhhhhhccccccHHHHhccc-hhhhhhhhhhhhhccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHHh--HHHhhhhh
Confidence 37788999999999888887 222 1455555 6779999999987 45679999999987 555553
Q ss_pred --CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccC---------C--------------CCCCcHHHHHHHhCChHHH
Q 007858 110 --QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIR---------G--------------GGQMTPLYIAALFGQSKMA 164 (587)
Q Consensus 110 --~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~---------~--------------~~g~tpL~~A~~~g~~~~v 164 (587)
..-.|+||||.|+.+.+.++|++|++.|+|+ +.+ | ..|+.||-+||.-++.|++
T Consensus 178 ~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV-~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv 256 (782)
T KOG3676|consen 178 TSEEYYGQSALHIAIVNRDAELVRLLLAAGADV-HARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV 256 (782)
T ss_pred hhHhhcCcchHHHHHHhccHHHHHHHHHcCCch-hhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence 2346999999999999999999999999997 321 1 1478899999999999999
Q ss_pred HHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhccccc--ccccccCCchHHHHHhhCCCCcccCCCCCccccc
Q 007858 165 SFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLL--AGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPG 241 (587)
Q Consensus 165 ~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~--~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~ 241 (587)
++|+++++ ++.+|..|+|.||+++..-..++-..+++. ++. ...+|..|-|||.+|++.|.
T Consensus 257 rlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~--ga~~l~~v~N~qgLTPLtLAaklGk-------------- 320 (782)
T KOG3676|consen 257 RLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALEL--GANALEHVRNNQGLTPLTLAAKLGK-------------- 320 (782)
T ss_pred HHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhc--CCCccccccccCCCChHHHHHHhhh--------------
Confidence 99999999 999999999999999999999999999998 555 78899999999999999997
Q ss_pred hhhhhccCCCchHHHHHHHHHHHH
Q 007858 242 IKFITNNTDSSTQALELVKCLWKE 265 (587)
Q Consensus 242 ~~~~~~~~~~~~~~~~~v~~Ll~~ 265 (587)
.++.+.+++.
T Consensus 321 --------------~emf~~ile~ 330 (782)
T KOG3676|consen 321 --------------KEMFQHILER 330 (782)
T ss_pred --------------HHHHHHHHHh
Confidence 8888888887
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-15 Score=128.29 Aligned_cols=122 Identities=24% Similarity=0.369 Sum_probs=113.0
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|.+|.||||.|+..|+.+++++|++.+ .+ .+.++..|.||||+|+..++.+++++|++.++++ +..+..|.||+|.
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~--~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~ 79 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENG--AD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHL 79 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcC--CC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHH
Confidence 678999999999999999999999998 66 6889999999999999999999999999999875 7788999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHH
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLL 200 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 200 (587)
|+..++.+++++|++.+. .+..+..+.+|++.|...+..++++.|+
T Consensus 80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 999999999999999886 6778889999999999999999988874
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=110.01 Aligned_cols=103 Identities=18% Similarity=0.219 Sum_probs=90.8
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
...+++++|.++.|+..+ ..+.++|.. ..|++|||+|+..|+.+++++|+..| ++ ++.+|+.|-|||-.|+..
T Consensus 5 ~~~W~vkNG~~DeVk~~v--~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iG--A~-i~~kDKygITPLLsAvwE 77 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSV--NEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIG--AN-IQDKDKYGITPLLSAVWE 77 (117)
T ss_pred hHhhhhccCcHHHHHHHH--HccccHHHH--hCCcccchHhhhcchHHHHHHHHHhc--cc-cCCccccCCcHHHHHHHH
Confidence 467899999999999998 556777765 48999999999999999999999999 88 999999999999999999
Q ss_pred CCHHHHHHHHhcCCcccccCCCCCCcHHHHH
Q 007858 125 GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 125 g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A 155 (587)
||.++|++|+++|++- ..+..+|.+.+..+
T Consensus 78 GH~~cVklLL~~GAdr-t~~~PdG~~~~eat 107 (117)
T KOG4214|consen 78 GHRDCVKLLLQNGADR-TIHAPDGTALIEAT 107 (117)
T ss_pred hhHHHHHHHHHcCccc-ceeCCCchhHHhhc
Confidence 9999999999999995 77788887765543
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1e-13 Score=104.88 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=92.4
Q ss_pred CcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 007858 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158 (587)
Q Consensus 79 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~ 158 (587)
+-...+++++|..+-|+..+..+ .+ +|..- .|+||||+||-.|+.+++++|+..|+++ +.+|+.|.|||--|+..
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g--~n-Vn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwE 77 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEG--LN-VNEIY-GGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWE 77 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHcc--cc-HHHHh-CCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHH
Confidence 44577899999999999999988 66 55544 7899999999999999999999999997 99999999999999999
Q ss_pred CChHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 007858 159 GQSKMASFLYRQNE-DNLEPDDLENTFFVS 187 (587)
Q Consensus 159 g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a 187 (587)
||.++|++|++.++ ......+|.+.+..+
T Consensus 78 GH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 78 GHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred hhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 99999999999999 667788888776544
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.9e-13 Score=127.71 Aligned_cols=125 Identities=23% Similarity=0.311 Sum_probs=75.9
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCC-----HHHHHHHHhcCC--cccccCCCC
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGS-----VEIAQFMLQRNP--NLLTIRGGG 147 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~-----~~iv~~Ll~~~~--~l~~~~~~~ 147 (587)
+..+.+++|.|+..+..+++++++..+ .+ ++.+|..|.||||+|+..++ .++++.|++.|+ +....+|..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLASG--AD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHcC--CC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 444566666666666666666666665 55 45666666666666666666 666666666666 344555666
Q ss_pred CCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 148 QMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|.||||+|+..|+.++++.|++.++ .+..+..|.|+++.|+..+..+++..+++.
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 6666666666666666666666665 455556666666666666666666666654
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-12 Score=122.76 Aligned_cols=129 Identities=26% Similarity=0.317 Sum_probs=118.4
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCC-----HHHHHHHHHccCCC--Ccccc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQ-----TNFVKQMVELTGHD--NLLSL 109 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~-----~~iv~~Ll~~~~~~--~ll~~ 109 (587)
..+..+.+++|.++..++.+.++.++ ..+.+++.. +..|.||||+|+..|+ .++++.|++.+ + +..+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g--~~~~~~~~ 142 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLL--ASGADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAG--ADLDVNNL 142 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHH--HcCCCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcC--CCCCCccc
Confidence 34455899999999999999998888 778888766 9999999999999999 99999999999 6 43778
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC
Q 007858 110 QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN 171 (587)
Q Consensus 110 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (587)
+|..|+||||+|+..|+.++++.|++.++++ +..+..|.|+++.|+..++.++++.+++.+
T Consensus 143 ~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 RDEDGNTPLHWAALNGDADIVELLLEAGADP-NSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred cCCCCCchhHHHHHcCchHHHHHHHhcCCCC-cccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 8999999999999999999999999999995 888999999999999999999999999876
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7e-13 Score=130.77 Aligned_cols=113 Identities=21% Similarity=0.207 Sum_probs=52.7
Q ss_pred HHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHH
Q 007858 85 ATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMA 164 (587)
Q Consensus 85 A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v 164 (587)
|+..|.+|+|+.++... .| ....|+.|.|+||-|+-.||.+||++|++.|+++ +..|.+|+||||+|+.+++..++
T Consensus 557 aaLeGEldlVq~~i~ev--~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEV--TD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred hhhcchHHHHHHHHHhh--cC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHHH
Confidence 44444455554444444 33 4444444555555555555555555555555553 44555555555555555555555
Q ss_pred HHHhhcCC--CCCCCCCCchHHHHHH--HhCcHHHHHHHHH
Q 007858 165 SFLYRQNE--DNLEPDDLENTFFVSI--ETGLYGLALQLLK 201 (587)
Q Consensus 165 ~~Ll~~~~--~~~~~~~g~t~l~~a~--~~~~~~~v~~Ll~ 201 (587)
+.|++.|+ .-..-.|+.|+..-|- +.|+.++.++|..
T Consensus 633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 55555444 1113334444444332 2344445554443
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.6e-13 Score=94.82 Aligned_cols=54 Identities=33% Similarity=0.533 Sum_probs=28.5
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML 134 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll 134 (587)
|.||||+|++.|+.+++++|++.+ .+ ++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~--~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG--AD-INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT--SG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 455666666666666666666555 55 5555666666666666666666666554
|
... |
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.2e-13 Score=96.63 Aligned_cols=56 Identities=29% Similarity=0.387 Sum_probs=33.0
Q ss_pred HHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHH
Q 007858 300 LTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLA 359 (587)
Q Consensus 300 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA 359 (587)
||++++..++..|..|+||||+|+.+|+.+++++|++.|++++ .+|++|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~----~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN----AKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC----CCcCCCCCHHHhC
Confidence 5677744489999999999999999999999999999999976 6999999999997
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-12 Score=116.50 Aligned_cols=123 Identities=19% Similarity=0.239 Sum_probs=111.2
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccc-cCCCCCCcHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS-LQDENGNTAFCFA 121 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~-~~d~~g~TpLh~A 121 (587)
..||..++..|+.+.+..|| ..-..+|.. |++|.|||..|+..|+.++|+.|++.| +| +| .++..+.||||+|
T Consensus 13 ~~~Lle~i~Kndt~~a~~LL--s~vr~vn~~-D~sGMs~LahAaykGnl~~v~lll~~g--aD-vN~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALL--STVRQVNQR-DPSGMSVLAHAAYKGNLTLVELLLELG--AD-VNDKQHGTLYTPLMFA 86 (396)
T ss_pred hhHHHHHHccCcHHHHHHHH--HHhhhhhcc-CCCcccHHHHHHhcCcHHHHHHHHHhC--CC-cCcccccccccHHHHH
Confidence 67899999999999999999 334557777 999999999999999999999999999 88 55 4678899999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|.+|+.++.++|++.|+.. ...|.-|+|+-..|+.-|+.++|..+-.+-.
T Consensus 87 ALSGn~dvcrllldaGa~~-~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t 136 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARM-YLVNSVGRTAAQMAAFVGHHECVAIINNHIT 136 (396)
T ss_pred HHcCCchHHHHHHhccCcc-ccccchhhhHHHHHHHhcchHHHHHHhcccc
Confidence 9999999999999999994 8899999999999999999999988776654
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-12 Score=92.67 Aligned_cols=54 Identities=30% Similarity=0.500 Sum_probs=45.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHh
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY 168 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (587)
|.||||+|++.|+.+++++|+++|.++ +.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999996 888999999999999999999999986
|
... |
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-12 Score=94.02 Aligned_cols=56 Identities=29% Similarity=0.444 Sum_probs=24.8
Q ss_pred HHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHH
Q 007858 97 MVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 97 Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A 155 (587)
|++++ +.+ ++.+|..|+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|
T Consensus 1 LL~~~-~~~-~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHG-PAD-VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA 56 (56)
T ss_dssp ------T---TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred CCccC-cCC-CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence 34444 455 6677777777777777777777777777777774 77777777777765
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.6e-12 Score=125.10 Aligned_cols=121 Identities=21% Similarity=0.247 Sum_probs=105.6
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
.|..|+..|.+++|+.++ ..-.|+... |..|-|+||-|+-.||.+||++|++.| ++ +|..|++|+||||+||.+
T Consensus 553 LLLDaaLeGEldlVq~~i--~ev~DpSqp-NdEGITaLHNAiCaghyeIVkFLi~~g--an-VNa~DSdGWTPLHCAASC 626 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRII--YEVTDPSQP-NDEGITALHNAICAGHYEIVKFLIEFG--AN-VNAADSDGWTPLHCAASC 626 (752)
T ss_pred HHHhhhhcchHHHHHHHH--HhhcCCCCC-CccchhHHhhhhhcchhHHHHHHHhcC--Cc-ccCccCCCCchhhhhhhc
Confidence 466799999999999999 444566666 888999999999999999999999999 99 999999999999999999
Q ss_pred CCHHHHHHHHhcCCcccccCCCCCCcHHHHH--HHhCChHHHHHHhhcC
Q 007858 125 GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA--ALFGQSKMASFLYRQN 171 (587)
Q Consensus 125 g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A--~~~g~~~~v~~Ll~~~ 171 (587)
++..+++.|++.|+.+....-.++.||..-+ -+.|..++.+||....
T Consensus 627 Nnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vq 675 (752)
T KOG0515|consen 627 NNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQ 675 (752)
T ss_pred CchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHHH
Confidence 9999999999999988666667888987755 3457788999988654
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.7e-12 Score=136.72 Aligned_cols=106 Identities=22% Similarity=0.254 Sum_probs=86.4
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
..|+.|+..|+.+.++.|+ +.+.+++.. |.+|.||||+|+..|+.++|++|++.| ++ ++.+|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL--~~Gadin~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~G--ad-vn~~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILL--TGGADPNCR-DYDGRTPLHIACANGHVQVVRVLLEFG--AD-PTLLDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHH--HCCCCCCCc-CCCCCcHHHHHHHCCCHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHHH
Confidence 3577888888888888888 677788877 888888888888888888888888888 77 88888888888888888
Q ss_pred cCCHHHHHHHHhc-------CCcccccCCCCCCcHHHHHH
Q 007858 124 VGSVEIAQFMLQR-------NPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 124 ~g~~~iv~~Ll~~-------~~~l~~~~~~~g~tpL~~A~ 156 (587)
.|+.+++++|+++ |++. +..+..|.+|+..+.
T Consensus 158 ~g~~~iv~~Ll~~~~~~~~~ga~~-~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 158 NGFREVVQLLSRHSQCHFELGANA-KPDSFTGKPPSLEDS 196 (664)
T ss_pred CCcHHHHHHHHhCCCcccccCCCC-CccccCCCCccchhh
Confidence 8888888888887 6664 666777777766544
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.3e-12 Score=136.50 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=91.6
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
+.|+.|+..|+.+.|+.|++.| ++ ++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G--ad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g 159 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG--AD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENG 159 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCC
Confidence 3588999999999999999998 88 9999999999999999999999999999999996 999999999999999999
Q ss_pred ChHHHHHHhhc-------CC-CCCCCCCCchHHH
Q 007858 160 QSKMASFLYRQ-------NE-DNLEPDDLENTFF 185 (587)
Q Consensus 160 ~~~~v~~Ll~~-------~~-~~~~~~~g~t~l~ 185 (587)
+.+++++|+++ ++ .+..+.+|.+++.
T Consensus 160 ~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 160 FREVVQLLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred cHHHHHHHHhCCCcccccCCCCCccccCCCCccc
Confidence 99999999998 44 4445565666544
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.1e-11 Score=110.87 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=113.0
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
-..||..++..|..+-...|++.. .+ +|.+|..|.|||..|+..|+.++|++|++.|+|+...++..+.||||+|+.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~v--r~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTV--RQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHh--hh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 367999999999999999999886 67 999999999999999999999999999999999988888889999999999
Q ss_pred hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 158 FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 158 ~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
+|+.++.++|++.|+ ....+.-|+|+-.+|+.-|+.+.|..+-..
T Consensus 89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred cCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 999999999999999 888999999999999999999988766543
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.8e-10 Score=113.33 Aligned_cols=122 Identities=21% Similarity=0.271 Sum_probs=111.7
Q ss_pred hHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcC
Q 007858 46 LYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVG 125 (587)
Q Consensus 46 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g 125 (587)
+..|+..+++-.++... ..+.++..+ +++..|.||+|+.-|+-|+|+|+++++ +.++++..|+.|.|+||-|+..+
T Consensus 870 il~av~~~D~~klqE~h--~~gg~ll~~-~~~~~sllh~a~~tg~~eivkyildh~-p~elld~~de~get~lhkaa~~~ 945 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETH--LNGGSLLIQ-GPDHCSLLHYAAKTGNGEIVKYILDHG-PSELLDMADETGETALHKAACQR 945 (1004)
T ss_pred HHHHHHhccHHHHHHHH--hcCCceEee-CcchhhHHHHHHhcCChHHHHHHHhcC-CHHHHHHHhhhhhHHHHHHHHhc
Confidence 78899999988888877 677777766 899999999999999999999999999 67779999999999999999999
Q ss_pred CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 126 SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 126 ~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
+..+.++|++.|+.+ ...|..|.||-.-|-+.|..+++.||-+...
T Consensus 946 ~r~vc~~lvdagasl-~ktd~kg~tp~eraqqa~d~dlaayle~rq~ 991 (1004)
T KOG0782|consen 946 NRAVCQLLVDAGASL-RKTDSKGKTPQERAQQAGDPDLAAYLESRQN 991 (1004)
T ss_pred chHHHHHHHhcchhh-eecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence 999999999999997 8999999999999999999999999977654
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.4e-09 Score=108.48 Aligned_cols=102 Identities=22% Similarity=0.328 Sum_probs=86.2
Q ss_pred cCCHHHHHHHHhhcCcc-chhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCC-CCCcHHHHHHHcCCHHH
Q 007858 52 KGDCNEAKRILGDDHQS-MLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDE-NGNTAFCFAAAVGSVEI 129 (587)
Q Consensus 52 ~g~~~~v~~Ll~~~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~-~g~TpLh~Aa~~g~~~i 129 (587)
.|...-++.++ +++.. ..|.. |..|+|+||+|+..|..++++||+++| .+ +..+|. .|.||||-|+..||+|+
T Consensus 27 Ks~~Nqlk~F~-~k~c~n~anik-D~~GR~alH~~~S~~k~~~l~wLlqhG--id-v~vqD~ESG~taLHRaiyyG~idc 101 (1267)
T KOG0783|consen 27 KSEPNQLKGFS-EKSCQNLANIK-DRYGRTALHIAVSENKNSFLRWLLQHG--ID-VFVQDEESGYTALHRAIYYGNIDC 101 (1267)
T ss_pred cCChhHHHHHH-HHhhhhhhhHH-HhhccceeeeeeccchhHHHHHHHhcC--ce-eeeccccccchHhhHhhhhchHHH
Confidence 34444566777 44443 34444 999999999999999999999999999 99 777775 59999999999999999
Q ss_pred HHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 130 AQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 130 v~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
+..|+.+|..+ .++|++|..||..-++-.
T Consensus 102 a~lLL~~g~SL-~i~Dkeglsplq~~~r~~ 130 (1267)
T KOG0783|consen 102 ASLLLSKGRSL-RIKDKEGLSPLQFLSRVL 130 (1267)
T ss_pred HHHHHhcCCce-EEecccCCCHHHHHhhcc
Confidence 99999999996 999999999999888743
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.8e-09 Score=100.80 Aligned_cols=94 Identities=19% Similarity=0.198 Sum_probs=51.7
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+.++..++.+|++.|++..++.+. -.+.+++.+ |.+.+|+||.||..|+.+++++|++.. ..+ ++.+|..|+|
T Consensus 501 ~~~~~~~i~~~~aa~~GD~~alrRf~--l~g~D~~~~-DyD~RTaLHvAAaEG~v~v~kfl~~~~-kv~-~~~kDRw~rt 575 (622)
T KOG0506|consen 501 PRENDTVINVMYAAKNGDLSALRRFA--LQGMDLETK-DYDDRTALHVAAAEGHVEVVKFLLNAC-KVD-PDPKDRWGRT 575 (622)
T ss_pred cccccchhhhhhhhhcCCHHHHHHHH--Hhccccccc-ccccchhheeecccCceeHHHHHHHHH-cCC-CChhhccCCC
Confidence 33444455555555555555555555 445555555 555555555555555555555555554 344 5555555555
Q ss_pred HHHHHHHcCCHHHHHHHHh
Q 007858 117 AFCFAAAVGSVEIAQFMLQ 135 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~ 135 (587)
||.-|-.-+|.+++++|-+
T Consensus 576 PlDdA~~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 576 PLDDAKHFKHKEVVKLLEE 594 (622)
T ss_pred cchHhHhcCcHHHHHHHHH
Confidence 5555555555555555544
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.2e-08 Score=95.84 Aligned_cols=94 Identities=20% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHH
Q 007858 76 KGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 76 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A 155 (587)
.++..++.+|+..|.+..++.+.-.+ .| ++.+|.+.+|+||.||..|+++++++|++....-++.+|+.|+|||.-|
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g--~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQG--MD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhc--cc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 44567889999999999998888887 88 9999999999999999999999999999986655788999999999999
Q ss_pred HHhCChHHHHHHhhcCC
Q 007858 156 ALFGQSKMASFLYRQNE 172 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~~ 172 (587)
...+|.+++++|-+...
T Consensus 581 ~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HhcCcHHHHHHHHHHhc
Confidence 99999999999887653
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-07 Score=92.14 Aligned_cols=118 Identities=18% Similarity=0.135 Sum_probs=99.9
Q ss_pred HHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-cccccCCCCCCcHHHHHHHhCC
Q 007858 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNP-NLLTIRGGGQMTPLYIAALFGQ 160 (587)
Q Consensus 82 Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~-~l~~~~~~~g~tpL~~A~~~g~ 160 (587)
+..|+..+..--++....+| .+ +-.++.+..|.||+|+..|+-|+|++++++|+ ++....|..|+|+||-|+..++
T Consensus 870 il~av~~~D~~klqE~h~~g--g~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNG--GS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcC--Cc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 44555565554445555555 67 77889999999999999999999999999997 4567888999999999999999
Q ss_pred hHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 161 SKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 161 ~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
-.+.++|++.++ ....|..|.||-..|-..|..+++.+|-.+
T Consensus 947 r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 999999999999 666899999999999999999999888765
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.52 E-value=8e-08 Score=58.76 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=22.4
Q ss_pred CCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 314 NGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 314 ~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
+|+||||+|+.+|+.+++++|+++|+|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 47788888888888888888888877754
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.6e-07 Score=90.42 Aligned_cols=86 Identities=21% Similarity=0.252 Sum_probs=69.4
Q ss_pred HHHHHHhcCCHHHHHHHHHccCCCCccccCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 81 ILHVATGAKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 81 ~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
-||-.++.|+.+..-.|+..| ++ .|..+ +.|.||||.|++.|+..-+++|+-+|+|+ ...|.+|.||+.+|-..|
T Consensus 136 QLhasvRt~nlet~LRll~lG--A~-~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~g 211 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLG--AQ-ANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGG 211 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcc--cc-cCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcC
Confidence 388888888888888888888 66 66554 45888888888888888888888888884 888888888888888888
Q ss_pred ChHHHHHHhhc
Q 007858 160 QSKMASFLYRQ 170 (587)
Q Consensus 160 ~~~~v~~Ll~~ 170 (587)
|.++.+.|++.
T Consensus 212 H~~laeRl~e~ 222 (669)
T KOG0818|consen 212 HHELAERLVEI 222 (669)
T ss_pred chHHHHHHHHH
Confidence 88877777654
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.7e-08 Score=100.65 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=82.0
Q ss_pred HHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCC-CCCcHHHHHHHhCChHHHHHHhhcCC-
Q 007858 95 KQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGG-GQMTPLYIAALFGQSKMASFLYRQNE- 172 (587)
Q Consensus 95 ~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~- 172 (587)
.++-..+ .++.|.+|..|+|+||+|+..+..++++||+++|.++ ..+|+ .|.||||-|+.+|+.|++..|+++|.
T Consensus 35 ~F~~k~c--~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 35 GFSEKSC--QNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred HHHHHhh--hhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 3444455 5668999999999999999999999999999999997 77775 59999999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHH
Q 007858 173 DNLEPDDLENTFFVSIE 189 (587)
Q Consensus 173 ~~~~~~~g~t~l~~a~~ 189 (587)
..+.|++|.+||...++
T Consensus 112 L~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 112 LRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred eEEecccCCCHHHHHhh
Confidence 77899999999988776
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.6e-07 Score=57.43 Aligned_cols=28 Identities=36% Similarity=0.739 Sum_probs=21.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCcc
Q 007858 113 NGNTAFCFAAAVGSVEIAQFMLQRNPNL 140 (587)
Q Consensus 113 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l 140 (587)
+|+||||+||+.|+.|++++|+++|+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4677777777777777777777777764
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.4e-07 Score=91.12 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=45.1
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
|||.++...+.+.....+..+....+... |..|+||||+|+..|+.+.++.|+..+ ++ +..+|.+|++|||.|+..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~~~~a~~Ll~a~--Ad-v~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGHVEAARILLSAG--AD-VSIKNNEGWSPLHEAVST 98 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcCHHHHHHHHhcC--CC-ccccccccccHHHHHHHc
Confidence 45555555555555544411111222222 555555555555555555555555555 44 555555555555555555
Q ss_pred CCHHHHHHHHhc
Q 007858 125 GSVEIAQFMLQR 136 (587)
Q Consensus 125 g~~~iv~~Ll~~ 136 (587)
|+.+++..++.+
T Consensus 99 g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 99 GNEQIITEVLRH 110 (560)
T ss_pred CCHHHHHHHHHH
Confidence 555555555544
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.8e-07 Score=58.10 Aligned_cols=27 Identities=30% Similarity=0.631 Sum_probs=15.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCcc
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPNL 140 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~l 140 (587)
|+||||+|+..|+.+++++|+++|+++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 555555555555555555555555553
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.4e-07 Score=88.71 Aligned_cols=88 Identities=22% Similarity=0.190 Sum_probs=81.2
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHc
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAV 124 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~ 124 (587)
.||.+++.|+.+..-.|| .-|+++|..--..|.||||+|++.|+..=++.|+-.| +| +...|.+|.||+.+|-..
T Consensus 136 QLhasvRt~nlet~LRll--~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG--AD-~~a~d~~GmtP~~~AR~~ 210 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLL--SLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG--AD-PGAQDSSGMTPVDYARQG 210 (669)
T ss_pred HHHHHhhcccHHHHHHHH--HcccccCCCCcccCCchhHHHHhccchhhhhHHhhcc--CC-CCCCCCCCCcHHHHHHhc
Confidence 599999999999988888 6789998875667999999999999999999999999 99 999999999999999999
Q ss_pred CCHHHHHHHHhcC
Q 007858 125 GSVEIAQFMLQRN 137 (587)
Q Consensus 125 g~~~iv~~Ll~~~ 137 (587)
||.++.+.|++.-
T Consensus 211 gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 211 GHHELAERLVEIQ 223 (669)
T ss_pred CchHHHHHHHHHH
Confidence 9999999888753
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.3e-07 Score=57.25 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=28.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCC
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDE 112 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~ 112 (587)
+|.||||+|+..|+.+++++|+++| ++ ++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g--a~-~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG--AD-INARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT--SC-TTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc--CC-CCCCCC
Confidence 5889999999999999999999988 77 777663
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.4e-06 Score=88.34 Aligned_cols=120 Identities=18% Similarity=0.197 Sum_probs=96.8
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCc---cchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQ---SMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+.-....|+..|+.-.|+..+ ++.. -++|+. |.-|.++||.|+.+.+.|++++|++.. .. . ..+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l-~~~~~~~lninc~-d~lGr~al~iai~nenle~~eLLl~~~--~~---~-----gdA 91 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKAL-EYKAVSKLNINCR-DPLGRLALHIAIDNENLELQELLLDTS--SE---E-----GDA 91 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHH-Hhccccccchhcc-ChHhhhceecccccccHHHHHHHhcCc--cc---c-----chH
Confidence 3344467899999999999999 4433 356666 899999999999999999999999986 33 2 357
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcc---------cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNL---------LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l---------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|-+|++.|..++|+.++.+-... ....-..+.|||.+||..++.|+++.|+++++
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 88999999999999999874321 11233457799999999999999999999998
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-06 Score=87.94 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=76.2
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
-|||.++.....+-....+....... ++.+|..|+||||+|++.|+.+.++.|+..|+++ ..+|++|++|||.|+..|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~-id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLV-IDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTG 99 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhce-eccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcC
Confidence 46999998877665544333222244 8899999999999999999999999999999996 999999999999999999
Q ss_pred ChHHHHHHhhcCC
Q 007858 160 QSKMASFLYRQNE 172 (587)
Q Consensus 160 ~~~~v~~Ll~~~~ 172 (587)
+.+++..++.+-.
T Consensus 100 ~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 100 NEQIITEVLRHLK 112 (560)
T ss_pred CHHHHHHHHHHhH
Confidence 9988888877664
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00024 Score=76.14 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=99.0
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCC--CCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGH--DNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~--~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
.+.--.-.|++.|+...|+..++.... -+ +|+.|.-|+++|+.|+.+.|.|++++|++.+... ..+|.+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~ln-inc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~ 94 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLN-INCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLL 94 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccc-hhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHH
Confidence 345567789999999999999987633 45 7899999999999999999999999999986553 468999
Q ss_pred HHHhCChHHHHHHhhcCCCC-----------CCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 155 AALFGQSKMASFLYRQNEDN-----------LEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~~~-----------~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|+..|..++|+.++.+.... ..-..+.||+.+|+..+++|+++.|+++
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR 153 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence 99999999999999887611 1234457999999999999999999998
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.1e-06 Score=86.78 Aligned_cols=89 Identities=20% Similarity=0.258 Sum_probs=78.8
Q ss_pred HHHHHhcCCHHHHHHHHHccCCCCccc--cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 82 LHVATGAKQTNFVKQMVELTGHDNLLS--LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 82 Lh~A~~~g~~~iv~~Ll~~~~~~~ll~--~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
|..|+...++..+-.||.+|...+ ++ ..+.+|.|+||+||+.|++.+.++|+-+|.++ ..+|..|.|+|.||-+.|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e-~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREE-VNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchh-hhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhcc
Confidence 667888888889999999985555 33 34667899999999999999999999999996 999999999999999999
Q ss_pred ChHHHHHHhhcCC
Q 007858 160 QSKMASFLYRQNE 172 (587)
Q Consensus 160 ~~~~v~~Ll~~~~ 172 (587)
.-|++..|+++|.
T Consensus 706 sqec~d~llq~gc 718 (749)
T KOG0705|consen 706 SQECIDVLLQYGC 718 (749)
T ss_pred cHHHHHHHHHcCC
Confidence 9999999999997
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.6e-05 Score=80.64 Aligned_cols=91 Identities=22% Similarity=0.248 Sum_probs=78.3
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCc--cchhhh-cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQ--SMLRAA-VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~--~~~~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
..|..|+...|+..+..|| .++ ..++.. .+.+|+|+||+||+.|++.+.++|+=.| .| +..+|.+|+|+|.|
T Consensus 626 qqLl~A~~~~Dl~t~~lLL--Ahg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg--~d-v~~rda~g~t~l~y 700 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLL--AHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG--VD-VMARDAHGRTALFY 700 (749)
T ss_pred HHHHHHHHHHHHHHHHHHH--hccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC--cc-ceecccCCchhhhh
Confidence 3488899999999999999 444 233332 2567899999999999999999999988 88 89999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCc
Q 007858 121 AAAVGSVEIAQFMLQRNPN 139 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~ 139 (587)
|-+.|..+++..|+++|..
T Consensus 701 ar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 701 ARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred HhhcccHHHHHHHHHcCCC
Confidence 9999999999999999754
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.92 E-value=9.8e-06 Score=88.98 Aligned_cols=84 Identities=24% Similarity=0.302 Sum_probs=56.6
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
.|.|+||.|+..|..-+++.|++.+ ++ +|.+|..|+||||.+...|+...+..|+++|++ ++..+.+|.+||++|.
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~g--a~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNG--AD-VNALDSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIAM 730 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcC--Cc-chhhhccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHHh
Confidence 3567777777777777777777776 66 667777777777777777777777777776666 3666777777777765
Q ss_pred HhCChHHH
Q 007858 157 LFGQSKMA 164 (587)
Q Consensus 157 ~~g~~~~v 164 (587)
...+.+++
T Consensus 731 ~~~~~d~~ 738 (785)
T KOG0521|consen 731 EAANADIV 738 (785)
T ss_pred hhccccHH
Confidence 55444443
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.2e-05 Score=67.65 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=57.5
Q ss_pred CCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 104 DNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 104 ~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
.+ +|.+|..|+|||+.|+..|+.+.+.+|+++|...+...|..|.+++.+|-+.|+.++++.|.+...
T Consensus 3 ~~-in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 3 GN-INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred CC-ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 45 888899999999999999999999999999844458888899999999999998888888887754
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.81 E-value=1.1e-05 Score=88.46 Aligned_cols=84 Identities=26% Similarity=0.327 Sum_probs=78.0
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHH
Q 007858 280 KPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLA 359 (587)
Q Consensus 280 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA 359 (587)
.|.++||.|+..|..-+.+.|++.+++ ++..|..|+||+|.+...|+...+..++++|++.+ +.|.+|++||++|
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~----a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPN----AFDPDGKLPLDIA 729 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccccc----ccCccCcchhhHH
Confidence 568999999999999999999999999 89999999999999999999999999999999977 7999999999999
Q ss_pred HHcCCCCCC
Q 007858 360 AQYSNPKPI 368 (587)
Q Consensus 360 ~~~~~~~~~ 368 (587)
....+.+++
T Consensus 730 ~~~~~~d~~ 738 (785)
T KOG0521|consen 730 MEAANADIV 738 (785)
T ss_pred hhhccccHH
Confidence 888665544
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.6e-05 Score=72.91 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=30.7
Q ss_pred HHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 007858 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPN 139 (587)
Q Consensus 82 Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~ 139 (587)
|..||+.|..+.|++|++.| .+ +|..|....+||.+|+..||.++|++|+++|+-
T Consensus 40 lceacR~GD~d~v~~LVetg--vn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETG--VN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred HHHHhhcccHHHHHHHHHhC--CC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 45555555555555555554 44 555555555555555555555555555555553
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.8e-05 Score=73.38 Aligned_cols=72 Identities=18% Similarity=0.345 Sum_probs=60.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 007858 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVS 187 (587)
Q Consensus 115 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a 187 (587)
.--|..||+.|..+.|+.|++.|.++ |..|+...+||++|+..||.++|++|+++|+ -+-..-+|.-.++.|
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhh
Confidence 34588999999999999999999997 9999999999999999999999999999999 333344555444433
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.73 E-value=3.8e-05 Score=83.84 Aligned_cols=123 Identities=20% Similarity=0.183 Sum_probs=97.4
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHc-cCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVEL-TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR-NPNLLTIRGGGQMTPL 152 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~~~~g~tpL 152 (587)
...|.|.+|+++..++..+++.+++. + .. ....|.+|.-.+|++ ..++.+.+-+++.. |.. .+.+|..|+|||
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~--~~-~~eld~d~qgV~hfc-a~lg~ewA~ll~~~~~~a-i~i~D~~G~tpL 645 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAG--SG-DLELDRDGQGVIHFC-AALGYEWAFLPISADGVA-IDIRDRNGWTPL 645 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccc--cC-chhhcccCCChhhHh-hhcCCceeEEEEeecccc-cccccCCCCccc
Confidence 56789999999999999999999986 4 33 556778888888884 45666666666654 445 489999999999
Q ss_pred HHHHHhCChHHHHHHhhcCC-C------CCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 153 YIAALFGQSKMASFLYRQNE-D------NLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 153 ~~A~~~g~~~~v~~Ll~~~~-~------~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|+|+..|+..++..|++.++ . ......|.|+-..|-.+|+.++..+|-+.
T Consensus 646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999998777 2 22456688888888888888887777664
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.71 E-value=3.7e-05 Score=83.91 Aligned_cols=129 Identities=15% Similarity=0.087 Sum_probs=99.7
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
.....|.+.+|.++..+..-.+..++ +..+...... |.+|.-.+|+ |..++.+..-+++... ... ++.+|..|+|
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~-e~~~~~~~el-d~d~qgV~hf-ca~lg~ewA~ll~~~~-~~a-i~i~D~~G~t 643 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVI-EWAGSGDLEL-DRDGQGVIHF-CAALGYEWAFLPISAD-GVA-IDIRDRNGWT 643 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHh-cccccCchhh-cccCCChhhH-hhhcCCceeEEEEeec-ccc-cccccCCCCc
Confidence 35668899999999999999999999 4323333333 7888888998 4555555555554433 256 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccc-----ccCCCCCCcHHHHHHHhCChHHHHHHhhc
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLL-----TIRGGGQMTPLYIAALFGQSKMASFLYRQ 170 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~-----~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (587)
|||+|+..|+..++..|++.|++-. ......|.|+-..|-.+|+..+..+|-+.
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999999998876532 22344689999999999999988888776
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00017 Score=63.20 Aligned_cols=70 Identities=14% Similarity=0.075 Sum_probs=62.5
Q ss_pred ccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 007858 67 QSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPN 139 (587)
Q Consensus 67 ~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~ 139 (587)
+.++|.+ |..|+|+|+.|+..|+.+.|.||+.+| -+. +...|..|.+++.+|-+.|+.++|..|-+...+
T Consensus 2 e~~in~r-D~fgWTalmcaa~eg~~eavsyllgrg-~a~-vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINAR-DAFGWTALMCAAMEGSNEAVSYLLGRG-VAF-VGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccch-hhhcchHHHHHhhhcchhHHHHHhccC-ccc-ccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 3467777 999999999999999999999999998 344 889999999999999999999999999987554
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0079 Score=35.37 Aligned_cols=26 Identities=27% Similarity=0.615 Sum_probs=15.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCc
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPN 139 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~ 139 (587)
|.||+|+|+..++.++++.|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 45666666666666666666665554
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.0079 Score=35.39 Aligned_cols=26 Identities=31% Similarity=0.575 Sum_probs=16.5
Q ss_pred CCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 315 GRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 315 g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
|.||+|+|+..++.++++.|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55666666666666666666666554
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.018 Score=58.16 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=51.4
Q ss_pred CHHHHHHHHHccCCCCc-----cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 90 QTNFVKQMVELTGHDNL-----LSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 90 ~~~iv~~Ll~~~~~~~l-----l~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
-.+.+++|.+++ .+. +...+..-.|+||+|+..|..++|.+||+.|.| +..+|..|.||..++.
T Consensus 403 ~p~~ie~lken~--lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENL--LSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcC--CcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc
Confidence 467788888876 330 123344467999999999999999999999988 6999999999999887
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.021 Score=57.80 Aligned_cols=64 Identities=19% Similarity=0.146 Sum_probs=51.9
Q ss_pred cHHHHHHHHHhCCCc-----cccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHH
Q 007858 293 NFKFLAVLTRSYPDL-----VHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAA 360 (587)
Q Consensus 293 ~~~iv~~Ll~~~~~~-----~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~ 360 (587)
..+.+++|.+++.+. ....+..--|+||+|+..|..++|.+||+.|+|+. .+|..|.||..++.
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~----~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPS----TKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCch----hcccCCCCcccccc
Confidence 356777777776653 12234456799999999999999999999999987 69999999999887
|
|
| >PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.35 Score=42.90 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=40.4
Q ss_pred hHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHh
Q 007858 283 KLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336 (587)
Q Consensus 283 t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 336 (587)
.-|..|+..|-.+.+.+.+++|.+. + .++|-.|+.+++.+++.+++.
T Consensus 145 ~hl~~a~~kgll~F~letlkygg~~-~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 145 QHLEKAAAKGLLPFVLETLKYGGNV-D------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCcc-c------HHHHHHHHHhhHHHHHHHhhc
Confidence 4577899999999999999999883 2 289999999999999998864
|
These proteins may be involved in promoting survival of infected macrophages []. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=92.31 E-value=1 Score=41.36 Aligned_cols=116 Identities=14% Similarity=0.159 Sum_probs=78.3
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCC----CCcHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDEN----GNTAF 118 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~----g~TpL 118 (587)
.-.|-.|+..-+.+.+..++ . +.. +-.+++-+|...+..+++.+|+.+- + ...+|-- +.--+
T Consensus 154 ~isledAV~AsN~~~i~~~V-t-dKk--------dA~~Am~~si~~~K~dva~~lls~f---~-ft~~dv~~~~~~~ydi 219 (284)
T PF06128_consen 154 DISLEDAVKASNYEEISNLV-T-DKK--------DAHQAMWLSIGNAKEDVALYLLSKF---N-FTKQDVASMEKELYDI 219 (284)
T ss_pred cccHHHHHhhcCHHHHHHHh-c-chH--------HHHHHHHHHhcccHHHHHHHHHhhc---c-eecchhhhcCcchhhH
Confidence 34578899999999988888 2 221 2356888999899999999999874 2 2222221 22233
Q ss_pred HHHHHc--CCHHHHHHHHhcCCcc---cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 119 CFAAAV--GSVEIAQFMLQRNPNL---LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 119 h~Aa~~--g~~~iv~~Ll~~~~~l---~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
-|+... .+..+++.++++|-.- +..+-+.|.|-|.-|..+++.+++.+|+++|+
T Consensus 220 eY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 220 EYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 344332 3566788888877432 23345678888888888888888888888886
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
| >PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses | Back alignment and domain information |
|---|
Probab=92.25 E-value=1.9 Score=38.42 Aligned_cols=36 Identities=22% Similarity=0.099 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHH
Q 007858 256 LELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR 302 (587)
Q Consensus 256 ~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~ 302 (587)
+..+...++.|.+++ .+.|..|+..++..++.+++.
T Consensus 156 l~F~letlkygg~~~-----------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 156 LPFVLETLKYGGNVD-----------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHcCCccc-----------HHHHHHHHHhhHHHHHHHhhc
Confidence 677777777776554 489999999999999998874
|
These proteins may be involved in promoting survival of infected macrophages []. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=91.12 E-value=2.1 Score=39.36 Aligned_cols=48 Identities=15% Similarity=0.202 Sum_probs=33.1
Q ss_pred cHHHHHHHHHhCCCccc---cccCCCCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 293 NFKFLAVLTRSYPDLVH---QLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 293 ~~~iv~~Ll~~~~~~~~---~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
+..++++++++|-..+| .+-+.|.|-|.-|+++++.+++.+|+++|+-
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 45566666666533233 3345688888888888888888888888873
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=88.88 E-value=0.68 Score=35.25 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=28.6
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR 136 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ 136 (587)
..+..|+..|+.|+++.+++.+ . ++ ...+..|+...+.+++++|+++
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~--~--~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN--K--PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh--c--cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3566666677777776666543 1 11 3456666666666777776665
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=84.99 E-value=1.5 Score=33.41 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=31.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN 171 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (587)
..+..|+..|+.|+++.+++.+.. . ...+..|+...+.+++++|++.-
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~--~------~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP--D------NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc--H------HHHHHHHHHHhhHHHHHHHHHhc
Confidence 456777777777777777754311 1 34577777777777777777653
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >cd07920 Pumilio Pumilio-family RNA binding domain | Back alignment and domain information |
|---|
Probab=84.65 E-value=45 Score=33.25 Aligned_cols=152 Identities=9% Similarity=-0.049 Sum_probs=84.2
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhc-CccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCcc-ccCCCCCC
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDD-HQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLL-SLQDENGN 115 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll-~~~d~~g~ 115 (587)
.+..|.-.|..+...++.+....++ ++ .+.-.....|..|+-.+-...+.+..+-...+++.- ..++. -..|..|.
T Consensus 17 ~~~~gsr~lQ~~l~~~~~~~~~~i~-~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~-~~~~~~l~~~~~g~ 94 (322)
T cd07920 17 KDQHGSRFLQQKLEEATPEEKELIF-DEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKI-LGHVVRLSLDMYGC 94 (322)
T ss_pred CCchhhHHHHHHhccCCHHHHHHHH-HHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHcccchhH
Confidence 4567777888888888888887777 33 232333334777888888887777766555555442 01111 13566777
Q ss_pred cHHHHHHHcCCHHHHHHHHhc--CCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC----CCCCCCCCchHHHHHHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE----DNLEPDDLENTFFVSIE 189 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~--~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----~~~~~~~g~t~l~~a~~ 189 (587)
-.+.-+...+..+....+++. +.-..-..|..|...+..+...+..+..+.+++.-. .-..+..|...+..+..
T Consensus 95 ~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~ 174 (322)
T cd07920 95 RVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLE 174 (322)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHH
Confidence 666666666654444433332 111113456667666666666655555444443322 11134455555555554
Q ss_pred hC
Q 007858 190 TG 191 (587)
Q Consensus 190 ~~ 191 (587)
..
T Consensus 175 ~~ 176 (322)
T cd07920 175 HC 176 (322)
T ss_pred hC
Confidence 43
|
Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon |
| >cd07920 Pumilio Pumilio-family RNA binding domain | Back alignment and domain information |
|---|
Probab=84.23 E-value=46 Score=33.19 Aligned_cols=161 Identities=9% Similarity=-0.004 Sum_probs=98.8
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcC-ccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCc-cccCCCCCC
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDH-QSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNL-LSLQDENGN 115 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~l-l~~~d~~g~ 115 (587)
.+..|+..+-.....+..+....++ +.- +.-.....+..|.-.+-.+...+..+....+++.- ..++ --..|..|+
T Consensus 53 ~~~~g~~vvq~~l~~~~~~~~~~i~-~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l-~~~~~~L~~d~~gn 130 (322)
T cd07920 53 VDPFGNYVIQKLFEHGTEEQRLQLL-EKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKEL-RGHVVELVKDQNGN 130 (322)
T ss_pred cCccccHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHH-HHCHHHHhhccccc
Confidence 4567777788888888877766666 322 33333344788888888888888766555555442 0110 224688899
Q ss_pred cHHHHHHHcCCHHHHHHHHhc----CCcccccCCCCCCcHHHHHHHhCChHH----HHHHhhcCCCCCCCCCCchHHHHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQR----NPNLLTIRGGGQMTPLYIAALFGQSKM----ASFLYRQNEDNLEPDDLENTFFVS 187 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~----~~~l~~~~~~~g~tpL~~A~~~g~~~~----v~~Ll~~~~~~~~~~~g~t~l~~a 187 (587)
..+..+...+..+..+.+++. -.+ -..++.|...+.-.......+. ++.+......-..|..|+..+..+
T Consensus 131 ~Vvq~~l~~~~~~~~~~i~~~l~~~~~~--l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~vvq~~ 208 (322)
T cd07920 131 HVIQKCIEKFPPEDLQFIIDAFKGNCVA--LSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHALELVQDQFGNYVVQHV 208 (322)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHH
Confidence 999888888777766655543 222 2456777777777766655443 333333222233677788888777
Q ss_pred HHhCcHHHHHHHHHh
Q 007858 188 IETGLYGLALQLLKK 202 (587)
Q Consensus 188 ~~~~~~~~v~~Ll~~ 202 (587)
.+.+..+..+.+++.
T Consensus 209 l~~~~~~~~~~i~~~ 223 (322)
T cd07920 209 LELGDPDDTSRIIEK 223 (322)
T ss_pred HhcCCHHHHHHHHHH
Confidence 777665544444443
|
Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 587 | ||||
| 1n11_A | 437 | D34 Region Of Human Ankyrin-R And Linker Length = 4 | 1e-05 | ||
| 4atz_D | 154 | Ad5 Knob In Complex With A Designed Ankyrin Repeat | 4e-05 |
| >pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437 | Back alignment and structure |
|
| >pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-10
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVE-LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQ 131
+T+ + LH+A ++ +++ + G L+ Q+ T A EIA+
Sbjct: 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62
Query: 132 FMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLE 181
+L +P L RG TPL++A G L + L+
Sbjct: 63 ALLGAGCDPELRDFRG---NTPLHLACEQGCLASVGVLTQSCTTPHLHSILK 111
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 5e-09
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 45 PLYKAALKGDCNEAKRILG---DDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL+ A +G + H + A T LH+A+ + +VEL
Sbjct: 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS---IHGY-LGIVEL- 135
Query: 102 GHDNLLSL------QDE-NGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
L+SL Q+ NG TA A + + ++ +L+ + N +T +G +P
Sbjct: 136 ----LVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG---YSPY 188
Query: 153 YIAALFGQSKMASFLYRQNEDNLEPD 178
+ +++ L + +NL+
Sbjct: 189 QLTWGRPSTRIQQQLGQLTLENLQML 214
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 9e-08
Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 31/140 (22%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA-----AVTKGYQTILHVATGAKQTNFVKQMVE 99
L+ A + + ++ + + QT LH+A Q ++ E
Sbjct: 11 FLHLAIIHEEKALTMEVI----RQVKGDLAFLNFQNNLQQTPLHLAVITNQ----PEIAE 62
Query: 100 LTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG------GG 147
LL L+D GNT A G + + Q G
Sbjct: 63 A-----LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNG 117
Query: 148 QMTPLYIAALFGQSKMASFL 167
T L++A++ G + L
Sbjct: 118 H-TCLHLASIHGYLGIVELL 136
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 1e-10
Identities = 72/386 (18%), Positives = 129/386 (33%), Gaps = 111/386 (28%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA-----AVTKGYQTILHVATGAKQTNFVKQMVE 99
PL+ AA G E + L L+ A K QT LH A MV+
Sbjct: 50 PLHMAARAG-HTEVAKYL-------LQNKAKVNAKAKDDQTPLHCAARIGH----TNMVK 97
Query: 100 LTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTP 151
L LL L G+T AA G VE +L++ + +T +G TP
Sbjct: 98 L-----LLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKG---FTP 149
Query: 152 LYIAALFGQSKMASFLYRQNED-NLEPDDLENTFFVSIETGLYGLALQLLKK----NKKL 206
L++AA +G+ ++A L ++ N + V++ + LL + +
Sbjct: 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP- 208
Query: 207 LAGATHAKYG-TAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE 265
A G T +H+ A+ N +E+ + L
Sbjct: 209 ------AWNGYTPLHIAAKQ---------------------NQ-------VEVARSL--- 231
Query: 266 ISKSTHKDVLKLISKPSKL----LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHI 321
+ + S L AA G+ + +A+L + + +++G + H+
Sbjct: 232 LQYGGSAN------AESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHL 284
Query: 322 AVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQE 381
H ++ + G + G LH+A+ Y N +++ +
Sbjct: 285 VAQEGHVPVADVLIKHGVMVDA----TTRMGYTPLHVASHYGN-----------IKLVKF 329
Query: 382 LKTFKEVETIVKPSFKEMKNNDGKTP 407
L + + K G +P
Sbjct: 330 L--------LQHQADVNAKTKLGYSP 347
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 3e-10
Identities = 79/399 (19%), Positives = 127/399 (31%), Gaps = 104/399 (26%)
Query: 45 PLYKAALKGDCNEAKRIL--GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTG 102
PL+ AA +G +L A +TK T LHVA AK ++ EL
Sbjct: 116 PLHIAAREGHVETVLALLEKEASQ-----ACMTKKGFTPLHVA--AKYGK--VRVAEL-- 164
Query: 103 HDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYI 154
LL +NG T A +++I + +L R +P+ G TPL+I
Sbjct: 165 ---LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG---YTPLHI 218
Query: 155 AALFGQSKMASFLYRQNEDNLEPDDLENT-FFVSIETGLYGLALQLLKK----NKKLLAG 209
AA Q ++A L + T ++ + G + LL K N
Sbjct: 219 AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG---- 274
Query: 210 ATHAKYG-TAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK 268
K G T +H++A+ + + + L I
Sbjct: 275 ---NKSGLTPLHLVAQE---------------------GH-------VPVADVL---IKH 300
Query: 269 S---THKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325
+ L A+H GN K + L + D V+ + G S H A
Sbjct: 301 GVMVDATTRMGYTP-----LHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQ 354
Query: 326 RHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTF 385
H D L+ + G V G L +A + + + LK
Sbjct: 355 GHTDIVTLLLKNGASPNE----VSSDGTTPLAIAKRLGY-----------ISVTDVLKV- 398
Query: 386 KEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEK 424
+ SF + + + E +L+ +E
Sbjct: 399 ----VTDETSFVLVSDKHRMSFPETV----DEILDVSED 429
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 4e-08
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 29/134 (21%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL+ A+ G K +L A +T LH+A A ++ +
Sbjct: 17 PLHVASFMGHLPIVKNLL--QR----GASPNVSNVKVETPLHMAARAGH----TEVAKY- 65
Query: 102 GHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLY 153
LL + ++ T AA +G + + +L+ NPNL T G TPL+
Sbjct: 66 ----LLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG---HTPLH 118
Query: 154 IAALFGQSKMASFL 167
IAA G + L
Sbjct: 119 IAAREGHVETVLAL 132
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-06
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 110 QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
E+G T A+ +G + I + +LQR +PN+ ++ TPL++AA G +++A +L
Sbjct: 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKV---ETPLHMAARAGHTEVAKYL 66
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 2e-09
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVE-LTGH 103
PL++A ++ + + + +L S+L G LH + ++ L
Sbjct: 5 PLHQACMENEFFKVQELL-HSKPSLLLQKDQDGR-IPLHWS--VSFQA--HEITSFLLSK 58
Query: 104 D---NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR----NPNLLTIRGGGQMTPLYIAA 156
NL D++G T F A +VG++E+ + + R + N +T +G +T L++A
Sbjct: 59 MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG---VTCLHLAV 115
Query: 157 LFGQSKMASFL 167
+++ FL
Sbjct: 116 GKKWFEVSQFL 126
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 9e-06
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T LH+A G K ++ + L+ ++D+ AA+VGS+++ +
Sbjct: 108 VTCLHLAVGKKW----FEVSQF-----LIENGASVRIKDKFNQIPLHRAASVGSLKLIEL 158
Query: 133 MLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + + + TPL+ A G A L
Sbjct: 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL 193
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 22/88 (25%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS-------LQDENGNTAFCFAAAVGSVEIAQ 131
Q LH A A + +++EL L QD+ G T A A G + A
Sbjct: 141 QIPLHRA--ASVGS--LKLIEL-----LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191
Query: 132 FMLQR---NPNLLTIRGGGQMTPLYIAA 156
++++ +L+ +G +A
Sbjct: 192 LLVEKYGAEYDLVDNKG---AKAEDVAL 216
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 | Back alignment and structure |
|---|
Score = 42.0 bits (100), Expect = 2e-04
Identities = 24/127 (18%), Positives = 37/127 (29%), Gaps = 26/127 (20%)
Query: 285 LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI 344
L A F + L S P L+ Q D++GR H +V + + + + +
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-L 64
Query: 345 ATYVDVSGNNLLHLAAQYSNPKP----ISKVPGAALEMQQELKTFKEVETIVKPSFKEMK 400
Y D SG H+A N + + L
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL---------------------NKI 103
Query: 401 NNDGKTP 407
N G T
Sbjct: 104 TNQGVTC 110
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 5e-09
Identities = 31/225 (13%), Positives = 58/225 (25%), Gaps = 55/225 (24%)
Query: 45 PLYKAALKGDCNEAKRIL----GDDHQSMLRAAVTKGY---------------QTILHVA 85
P++ A + + L + Q QT LH
Sbjct: 87 PIHLAVMAN-KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWC 145
Query: 86 TGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--- 136
+M+++ L+ +D+ T A + E M+
Sbjct: 146 --VGLGPEYLEMIKI-----LVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198
Query: 137 ----NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENT-FFVSIETG 191
+ +G + L+ A L +A D D+ ++S+
Sbjct: 199 KSSLRLDYANKQG---NSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255
Query: 192 LYGLALQLLKKNKKLLAGATHAKYG-----------TAMHMLARN 225
+ L +LL+K L A G + A
Sbjct: 256 MVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 51/360 (14%), Positives = 100/360 (27%), Gaps = 116/360 (32%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
+HVA A++ V L+ +Q+ G TA A G
Sbjct: 15 KSDDENMEKIHVA--ARKGQ--TDEVRR-----LIETGVSPTIQNRFGCTALHLACKFGC 65
Query: 127 VEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFV 186
V+ A+++ G P+++A + ++ + L
Sbjct: 66 VDTAKYLASVGEVHSLWHG---QKPIHLAVMANKTDLVVAL------------------- 103
Query: 187 SIETGLYGLALQLLKKNKKLLAGATHAKYG-TAMHMLARNPSAFTSNCPGWLKVPGIKFI 245
+E + G +L +V I
Sbjct: 104 -VEGA---------------------KERGQMPESLLNEC---------DEREVNEIGSH 132
Query: 246 TNNTDSSTQALELVKCLWKEISKSTHKDVLK-LISK-------------PSKLLFDAAHS 291
+ T AL W + +++K L+ P L A
Sbjct: 133 VKHCKGQT-AL-----HWCVGLGPEYLEMIKILVQLGASPTAKDKADETP---LMRAMEF 183
Query: 292 GNFKFLAVLTRSYPDL----VHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATY 347
N + L ++ + P + ++ G S H A++ D EMG D +
Sbjct: 184 RNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM---- 239
Query: 348 VDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTP 407
D L+L+ + + + + +EL ++ + ++G T
Sbjct: 240 EDNEHTVPLYLSVRAAM-----------VLLTKEL-----LQKTDVFLIQACPYHNGTTV 283
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 4e-07
Identities = 43/339 (12%), Positives = 83/339 (24%), Gaps = 78/339 (23%)
Query: 45 PLYKAALKGDCNEAKRIL---GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELT 101
L+ A G C + + L G+ H Q +H+A A + +V
Sbjct: 56 ALHLACKFG-CVDTAKYLASVGEVHS-------LWHGQKPIHLAVMANK----TDLVVA- 102
Query: 102 GHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQS 161
L+ E G E+ + ++ +G T L+ G
Sbjct: 103 ----LVEGAKERGQMPESLLNECDEREVNEI----GSHVKHCKG---QTALHWCVGLGPE 151
Query: 162 --KMASFLYRQNEDNLEPDDLENT-FFVSIETGLYGLALQLLKKNKKLLAGA---THAKY 215
+M L + D + T ++E ++ + K
Sbjct: 152 YLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQ 210
Query: 216 G-TAMHMLARNPSAFTSNCPGWLKVPGIKF-ITN-------NTDSSTQALELVKCLWKEI 266
G + +H W V + + + + L L
Sbjct: 211 GNSHLHWAILI---------NWEDV--AMRFVEMGIDVNMEDNEHTV-PLYLS------- 251
Query: 267 SKSTHKDVLK-LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMH 325
++ + K L+ K L A N V A
Sbjct: 252 VRAAMVLLTKELLQKTDVFLIQACPYHNGTT-----------VLPDRVVWLDFVPAAADP 300
Query: 326 RHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSN 364
+ +L+ E + +G + +
Sbjct: 301 SKQEVLQLLQEKLDEVVR----SLNTGAGGAVKRKKKAA 335
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 11/107 (10%), Positives = 26/107 (24%), Gaps = 15/107 (14%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENG----------NTAFCFAA 122
+ L+++ A K++++ T + + NG AA
Sbjct: 239 MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAA 298
Query: 123 AVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
E+ Q + ++ G +
Sbjct: 299 DPSKQEVLQLLQEKLDEVVRSLNTG---AGGAVKRKKKAAPAVKRMK 342
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 6e-09
Identities = 39/199 (19%), Positives = 62/199 (31%), Gaps = 48/199 (24%)
Query: 44 VPLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVEL 100
A GD E R+L A T LH A MV+
Sbjct: 42 AVFLAACSSGDTEEVLRLLERG------ADINYANVDGLTALHQACIDDN----VDMVKF 91
Query: 101 TGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
L+ D G AA+ G ++IA++++ + + + G TPL
Sbjct: 92 -----LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEG---DTPL 143
Query: 153 YIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLL--AGA 210
IA ++ + + IE +L+ ++ L
Sbjct: 144 DIAEEEAMEELLQNEVNRQGVD-------------IEAARKEEERIMLRDARQWLNSGHI 190
Query: 211 ---THAKYG-TAMHMLARN 225
HAK G TA+H+ A
Sbjct: 191 NDVRHAKSGGTALHVAAAK 209
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 5e-07
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 25/129 (19%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGY---QTILHVATGAKQTNFVKQMVE-L 100
PL A + + +L+ V + + ++ + L
Sbjct: 142 PLDIAEEEA------------MEELLQNEVNRQGVDIEAARKEEE----RIMLRDARQWL 185
Query: 101 TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALF 158
++G TA AAA G E+ + ++Q + N+ G TPL+ AA +
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG---WTPLHAAAHW 242
Query: 159 GQSKMASFL 167
G+ + L
Sbjct: 243 GKEEACRIL 251
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 20/112 (17%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T LHVA A + ++++L L+ ++D +G T AA G E +
Sbjct: 200 GTALHVA--AAKGY--TEVLKL-----LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLEN 182
+++ + + G T +A + +QN + E + ++
Sbjct: 251 LVENLCDMEAVNKVG---QTAFDVADEDILGYLEELQKKQNLLHSEKREKKS 299
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 5e-05
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 11/92 (11%)
Query: 79 QTILHVATGAKQTNFVKQMVE-LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR- 136
+ + + +E ++ ++G F A + G E +L+R
Sbjct: 9 KRNEQLKRWIGS----ETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLLERG 63
Query: 137 -NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ N + G +T L+ A + M FL
Sbjct: 64 ADINYANVDG---LTALHQACIDDNVDMVKFL 92
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 7e-09
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 26/130 (20%)
Query: 49 AALKGDCNEAKRIL---GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDN 105
AA + D + K+ L + + ++T LH A + KQ+ EL
Sbjct: 185 AAREADLAKVKKTLALEIINF------KQPQSHETALHCAVASLHPKR-KQVAEL----- 232
Query: 106 LLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAAL 157
LL ++++ T AA ++ + + + N L G T L+ AAL
Sbjct: 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLG---QTALHRAAL 289
Query: 158 FGQSKMASFL 167
G + L
Sbjct: 290 AGHLQTCRLL 299
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-08
Identities = 49/306 (16%), Positives = 94/306 (30%), Gaps = 86/306 (28%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
A KG LH A ++ EL LL D T AA+
Sbjct: 86 AKDKGGLVPLHNACSYGH----YEVTEL-----LLKHGACVNAMDLWQFTPLHEAASKNR 136
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTF 184
VE+ +L +P L+ G + + +A + ++ ++ +
Sbjct: 137 VEVCSLLLSHGADPTLVNCHG---KSAVDMAPTPELRERLTYEFKGH------------- 180
Query: 185 FVSIETGLYGLALQLLKKNKKLL-AGA---THAKYG-TAMHMLARNPSAFTSNCPGWLKV 239
+ L L K KK L + TA+H +
Sbjct: 181 -----SLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVAS-------------- 221
Query: 240 PGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKL----LFDAAHSGNFK 295
+ ++ + L + K + +++ +K L AA +
Sbjct: 222 -----------LHPKRKQVAELL---LRKGAN------VNEKNKDFMTPLHVAAERAHND 261
Query: 296 FLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNL 355
+ VL + ++ LD G++ H A + H T +L+ G D + + + G
Sbjct: 262 VMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI----ISLQGFTA 316
Query: 356 LHLAAQ 361
+ +
Sbjct: 317 AQMGNE 322
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 8e-07
Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 30/145 (20%)
Query: 34 NDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQ 90
+Y K L +AA G+ + +L L A T LH+A G +
Sbjct: 18 VLTGEY--KKDELLEAARSGNEEKLMALLTP-----LNVNCHASDGRKSTPLHLAAGYNR 70
Query: 91 TNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLT 142
++V+L LL +D+ G A + G E+ + +L+ N +
Sbjct: 71 ----VRIVQL-----LLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD 121
Query: 143 IRGGGQMTPLYIAALFGQSKMASFL 167
+ TPL+ AA + ++ S L
Sbjct: 122 LWQ---FTPLHEAASKNRVEVCSLL 143
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 45/338 (13%), Positives = 94/338 (27%), Gaps = 77/338 (22%)
Query: 33 QNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTN 92
N++K + L + E L + S + Q HV+ +
Sbjct: 56 DNEQKMKLE---AFLQRLLFPEIQEMPTSLNN-DSSNRNSEGGSSNQQQQHVSF----DS 107
Query: 93 FVKQMVE-LTGHD-NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQ 148
++++ + NL DE+GNT + ++ ++E+ + +++ N G
Sbjct: 108 LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG--- 164
Query: 149 MTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLA 208
+ L A + G LL L
Sbjct: 165 ESCLVKAVKSVNNYD-----------------------------SGTFEALL----DYLY 191
Query: 209 GATHAK--YG-TAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE 265
+ T +H + + T S A + L
Sbjct: 192 PCLILEDSMNRTILHHIIIT--------------------SGMTGCSAAAKYYLDILMGW 231
Query: 266 ISKSTHKDVLKLISKPSKLLFDAAHSG--NFKFLAVLTRSYPDLVHQLDENGRSIFHIAV 323
I K ++ + ++ D + L ++++ D NG + +IA
Sbjct: 232 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 291
Query: 324 MHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ 361
+ + + G D + + SG + A
Sbjct: 292 RLGNISIVDALLDYGADPFI----ANKSGLRPVDFGAG 325
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 6e-04
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 19/98 (19%)
Query: 310 QLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPIS 369
+DE+G + H + + K + + G ++ D G + L A + N
Sbjct: 126 PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY----GDNMGESCLVKAVKSVNNY--- 178
Query: 370 KVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTP 407
+ TF+ + + P ++++ +T
Sbjct: 179 -----------DSGTFEALLDYLYPC-LILEDSMNRTI 204
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 1e-08
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 35/141 (24%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA------AVTKGYQTILHVATGAKQTNFVKQMV 98
PL+ A ++G+ R++ ++ + QT LH+A T +V
Sbjct: 12 PLHIAVVQGNLPAVHRLV-----NLFQQGGRELDIYNNLRQTPLHLA--VITTL--PSVV 62
Query: 99 ELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR------NPNLLTIRGG 146
L L++ D +G TA A S + +L + G
Sbjct: 63 RL-----LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG- 116
Query: 147 GQMTPLYIAALFGQSKMASFL 167
+T L++A + L
Sbjct: 117 --LTALHVAVNTECQETVQLL 135
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 9e-07
Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 26/135 (19%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
+ A + +L D + A T LHVA T ++ V+L
Sbjct: 82 AAHLACEHRSPTCLRALL--DSAAPGTLDLEARNYDGLTALHVAV---NTEC-QETVQL- 134
Query: 102 GHDNLLS------LQD-ENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
LL D ++G + A S+ + Q +LQ N N G + L
Sbjct: 135 ----LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG---SSAL 187
Query: 153 YIAALFGQSKMASFL 167
+ A+ G + L
Sbjct: 188 HSASGRGLLPLVRTL 202
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 1e-06
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
++ L A + + MV+L LL Q +G++A A+ G + + +
Sbjct: 151 RSPLIHA--VENNS--LSMVQL-----LLQHGANVNAQMYSGSSALHSASGRGLLPLVRT 201
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+++ + +L TPL +A +
Sbjct: 202 LVRSGADSSLKNCHN---DTPLMVARSRRVIDILRGK 235
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 9/68 (13%)
Query: 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQR------NPNLLTIRGGGQMTPLYIAALFG 159
+ + DE+G+T A G++ ++ ++ TPL++A +
Sbjct: 1 MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR---QTPLHLAVITT 57
Query: 160 QSKMASFL 167
+ L
Sbjct: 58 LPSVVRLL 65
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 7e-05
Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 23/101 (22%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS----------LQDENGNTAFCFAAAVGSVE 128
QT H+A + + LL ++ +G TA A E
Sbjct: 80 QTAAHLAC---EHRS-PTCLRA-----LLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 130
Query: 129 IAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
Q +L+R + + + I+ G +PL A M L
Sbjct: 131 TVQLLLERGADIDAVDIKSG--RSPLIHAVENNSLSMVQLL 169
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 2e-08
Identities = 73/497 (14%), Positives = 141/497 (28%), Gaps = 164/497 (32%)
Query: 1 MERRRTNVAPASQQEISISITGRDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKR 60
+++ + P S + +S+Q ++ K Y+ L
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ--AELRRLLKSK---PYENCL--------L 248
Query: 61 ILGDD--HQSMLRA-------AVTKGYQTILHVATGAKQTNF--VKQMVELTGHDNLLSL 109
+L + + A +T ++ + + A T+ + LT D + SL
Sbjct: 249 VL-LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT-PDEVKSL 306
Query: 110 QDENGNTAFCFAAAVGSV--EIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ ++ + +L NP L+I IA + L
Sbjct: 307 ----------LLKYLDCRPQDLPREVLTTNPRRLSI----------IAES-----IRDGL 341
Query: 168 YR-QNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNP 226
N ++ D L S+ L +K L+
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNV----LEPAEYRKMFDRLS------------------ 379
Query: 227 SAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLF 286
F + +P T L L +W ++ KS V+ + K S +
Sbjct: 380 -VFPPS----AHIP------------TILLSL---IWFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 287 DAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLI--YEM--GFDKE 342
S T S P + L+ + + +HR ++ Y + FD +
Sbjct: 420 QPKES---------TISIPSI--YLELK-VKLENEYALHR-----SIVDHYNIPKTFDSD 462
Query: 343 -LIATYVDVSGNNLL--HL--AAQYSNPKPISKV--------------------PGAALE 377
LI Y+D + + HL V G+ L
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 378 MQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEEAEKWMKSRAESCSIVA 437
Q+LK +K + +ND K +E + L + E+ + ++ ++
Sbjct: 523 TLQQLKFYK----------PYICDNDPK--YERLVNAILDFLPKIEENL-ICSKYTDLL- 568
Query: 438 TLATAGVFQAAFTPPGG 454
+ A
Sbjct: 569 --------RIALMAEDE 577
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 | Back alignment and structure |
|---|
Score = 53.2 bits (129), Expect = 2e-08
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
++ +G+ + L D+ ++ L G+ + LH A ++ +VE+
Sbjct: 8 DIFTQCREGNAVAVRLWL-DNTENDLNQGDDHGF-SPLHWA--CREGR--SAVVEM---- 57
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
L+ + + +T AA+ G +I Q +LQ + N + G PL+ A
Sbjct: 58 -LIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHG---NVPLHYAC 113
Query: 157 LFGQSKMASFL 167
+GQ ++A L
Sbjct: 114 FWGQDQVAEDL 124
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 6e-05
Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGS 126
+ +G T LH+A A + + +V+ LL +E+GN +A G
Sbjct: 67 VMNRGDDTPLHLA--ASHGH--RDIVQK-----LLQYKADINAVNEHGNVPLHYACFWGQ 117
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
++A+ ++ ++ G P+ A + +
Sbjct: 118 DQVAEDLVANGALVSICNKYG---EMPVDKAKAPLRELLRERA 157
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 20/129 (15%)
Query: 43 CVPLYKAALKGDCNEAKRIL--GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVEL 100
V +++A + + D +T T T +T +
Sbjct: 13 QVKVFRALYTFEPRTPDELYIEEGDII-----YITDMSDTNWWKGTSKGRTGLIPS---- 63
Query: 101 TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALF 158
N ++ Q E+ + AA G++ + L N L G T LY A
Sbjct: 64 ----NYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAG---STALYWACHG 116
Query: 159 GQSKMASFL 167
G + L
Sbjct: 117 GHKDIVEML 125
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 30/151 (19%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL++AA +G+ + + L D+ R + K T L+ A + K +VE+
Sbjct: 76 PLHEAAKRGNLSWLRECL--DN----RVGVNGLDKAGSTALYWA--CHGGH--KDIVEM- 124
Query: 102 GHDNLLS-------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
L + Q++ G+TA AA G +I Q +L + +L I
Sbjct: 125 ----LFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEK---KLAF 177
Query: 153 YIAALFGQSKMASFLYRQNEDNLEPDDLENT 183
+A + + + + +
Sbjct: 178 DMATNAACASLLKKKQGTDAVRTLSNAEDYL 208
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 18/121 (14%), Positives = 32/121 (26%), Gaps = 18/121 (14%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
LY A G + + + ++ K T LH A +V+L
Sbjct: 109 ALYWACHGGHKDIVEMLF--TQPNIELNQQNKLGDTALHAAAWKGY----ADIVQL---- 158
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158
LL+ L++ AF A + + + + L
Sbjct: 159 -LLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY-LDDEDSDLE 216
Query: 159 G 159
Sbjct: 217 H 217
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 3e-08
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 17/98 (17%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+ L A + + V+ + L LL ++ E G T A + + Q
Sbjct: 183 RNALIHALLSSDDSDVEAITHL-----LLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237
Query: 133 MLQR---NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L++ N G T L +A K+A L
Sbjct: 238 LLEQEHIEINDTDSDG---KTALLLAVELKLKKIAELL 272
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 1e-07
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 22/131 (16%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L KA D + +++L + + + +G T LH A + + +VEL
Sbjct: 8 LLIKAVQNEDVDLVQQLL--EGGANVNFQEEEGGWTPLHNAVQMSR----EDIVEL---- 57
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
LL L+ +NG T F AA GSV++ + L + + N G T AA
Sbjct: 58 -LLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG---FTAFMEAA 113
Query: 157 LFGQSKMASFL 167
++G+ K FL
Sbjct: 114 VYGKVKALKFL 124
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 1e-05
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 24/110 (21%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
K T +A A + ++++L LS D G TAF AA G
Sbjct: 67 LRKKNGATPFLLA--AIAGS--VKLLKL-----FLSKGADVNECDFYGFTAFMEAAVYGK 117
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQ-------MTPLYIAALFGQSKMASFL 167
V+ +F+ +R N NL Q T L AA G ++ L
Sbjct: 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 2e-04
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 111 DENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
N A V++ Q +L+ N N GG TPL+ A + + L
Sbjct: 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGG--WTPLHNAVQMSREDIVELL 58
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 4e-08
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Query: 62 LGDDHQSMLRAAVTKG-YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120
G D + A +T LH+A + + + L + L Q G+TA +
Sbjct: 152 DGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211
Query: 121 AAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ E + +L+ ++ G+ TPL IA L
Sbjct: 212 CCLTDNAECLKLLLRGKASIEIANESGE-TPLDIAKRLKHEHCEELL 257
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 53.2 bits (129), Expect = 6e-08
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T L +A V+ M+E L++ D+ G +A +AAAV +V+ A
Sbjct: 125 TTPLILAAR----LAVEGMLED-----LINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 175
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ N ++ R TPL++AA G + A L
Sbjct: 176 LLKNGANKDMQNNRE---ETPLFLAAREGSYETAKVL 209
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 1e-06
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 32/143 (22%)
Query: 45 PLYKAALKGDCNEAKRILG-DDHQSM----------LRAAVTKGYQTILHVATGAKQTNF 93
PL A+ G E +D ++ L + +T LH+A A+ +
Sbjct: 13 PLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLA--ARYSR- 69
Query: 94 VKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQ---RNPNLLTIR 144
+ LL +QD G T A + + + Q +++ + +
Sbjct: 70 -SDAAKR-----LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 123
Query: 145 GGGQMTPLYIAALFGQSKMASFL 167
G TPL +AA M L
Sbjct: 124 G---TTPLILAARLAVEGMLEDL 143
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 1e-06
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 30/135 (22%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
L+ AA + AKR+L + A +T LH A A + + ++
Sbjct: 60 ALHLAARYSRSDAAKRLL--EA----SADANIQDNMGRTPLHAAVSADA----QGVFQI- 108
Query: 102 GHDNLLS-------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
L+ + +G T AA + + + ++ + N + G + L
Sbjct: 109 ----LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG---KSAL 161
Query: 153 YIAALFGQSKMASFL 167
+ AA A L
Sbjct: 162 HWAAAVNNVDAAVVL 176
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 4e-06
Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
AV ++ LH A A N + LL +Q+ T AA GS
Sbjct: 152 AVDDLGKSALHWA--AAVNN--VDAAVV-----LLKNGANKDMQNNREETPLFLAAREGS 202
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
E A+ +L N ++ P IA + L
Sbjct: 203 YETAKVLLDHFANRDITDHMD---RLPRDIAQERMHHDIVRLL 242
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 5e-06
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 16/102 (15%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDN----LLS-------LQDENGNTAFCFAAAVGSV 127
T L +A+ + E + D G TA AA
Sbjct: 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRS 70
Query: 128 EIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ A+ +L+ + N+ G TPL+ A + L
Sbjct: 71 DAAKRLLEASADANIQDNMG---RTPLHAAVSADAQGVFQIL 109
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 6e-08
Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 22/142 (15%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAV-TKGYQTILHVATGAKQTNFVKQMVELTGH 103
Y A + +L + A + LH A A + ++V++
Sbjct: 34 ASYYAIADNNVRLVCTLL--NAG----ALKNLLENEFPLHQA--ATLED--TKIVKI--- 80
Query: 104 DNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157
LL D+ GNTA +A G+++ + +++N L+ G T Y A +
Sbjct: 81 --LLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 138
Query: 158 FGQSKMASFLYRQNEDNLEPDD 179
+ S+ + +
Sbjct: 139 LNDVSIVSYFLSEIPSTFDLAI 160
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 4e-06
Identities = 20/131 (15%), Positives = 35/131 (26%), Gaps = 22/131 (16%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
LY A G+ K + L G++T + A + +V
Sbjct: 98 ALYYAVDSGNMQTVKLFV--KKNWRLMFYGKTGWKTSFYHA--VMLND--VSIVSY---- 147
Query: 105 NLLS-----LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTP-LYIAA 156
LS + G V++ +L + N P + +A
Sbjct: 148 -FLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLL---FIPDIKLAI 203
Query: 157 LFGQSKMASFL 167
+M L
Sbjct: 204 DNKDIEMLQAL 214
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 8e-06
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 15/92 (16%)
Query: 79 QTILHVATGAKQTNFVKQMVEL-TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR- 136
+ + T KQ+ + D D +G++A +A A +V + +L
Sbjct: 2 MDLSRINTWK-----SKQLKSFLSSKD--TFKADVHGHSASYYAIADNNVRLVCTLLNAG 54
Query: 137 -NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
N + PL+ AA +K+ L
Sbjct: 55 ALKN---LLEN--EFPLHQAATLEDTKIVKIL 81
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 51/410 (12%), Positives = 92/410 (22%), Gaps = 147/410 (35%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVE-LTGH 103
L +A+ G + L G N + + +
Sbjct: 40 SLLEASYDGYIKRQRNELQHYSL------------YPNPQGYG----NGNDFLGDFNHTN 83
Query: 104 DNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKM 163
+ + + AA GS I + + + + N++ R T L+ A ++
Sbjct: 84 LQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPRHN--RTVLHWIASNSSAEK 140
Query: 164 ASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYG-TAMHML 222
+ L I G A N T + +
Sbjct: 141 SEDLIVHEAKEC------------IAAG----A----DVNAM-------DCDENTPLMLA 173
Query: 223 ARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK-----------ST- 270
LV L + +
Sbjct: 174 VLA---------------------RR-------RRLVAYL---MKAGADPTIYNKSERSA 202
Query: 271 --------HKDVLK-LISKPSKL-------------LFDAAHSGNF------KFL----A 298
++ +++ L AH+ K L A
Sbjct: 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGA 262
Query: 299 VLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK-LIYEMGFDKELIATYVDVSGNNLLH 357
+ GR+ H A + K L+ E G +K+ D G +
Sbjct: 263 KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK----QDEDGKTPIM 318
Query: 358 LAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTP 407
LAAQ +E+ L I + + E + T
Sbjct: 319 LAAQEGR-----------IEVVMYL--------IQQGASVEAVDATDHTA 349
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 29/140 (20%)
Query: 45 PLYKAALKG--DCNEAKRIL---G---DDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQ 96
L A D + ++L G D + + + +T LH A A+ +N
Sbjct: 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA--AQVSN--MP 293
Query: 97 MVELTGHDNLLSL-------QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGG 147
+V+ L+ QDE+G T AA G +E+ +++Q+ + +
Sbjct: 294 IVKY-----LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATD-- 346
Query: 148 QMTPLYIAALFGQSKMASFL 167
T +A +
Sbjct: 347 -HTARQLAQANNHHNIVDIF 365
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 31/142 (21%)
Query: 34 NDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRA-----AVTKGYQTILHVATGA 88
D + H L+ A +++ ++ + + + A A+ T L +A
Sbjct: 120 IDPR---HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAV-- 174
Query: 89 KQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR-----N 137
+++V L+ + +++ +A AAA + +ML +
Sbjct: 175 -LARR-RRLVAY-----LMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 227
Query: 138 PNLLTIRGGGQMTPLYIAALFG 159
L G MT L I A
Sbjct: 228 IEELDRNG---MTALMIVAHNE 246
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 36/330 (10%), Positives = 77/330 (23%), Gaps = 110/330 (33%)
Query: 109 LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLY 168
+ + A+ G ++ + LQ + P G + F +
Sbjct: 32 QSITSSQHSLLEASYDGYIKRQRNELQHY----------SLYPNPQGYGNGNDFLGDFNH 81
Query: 169 RQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKK------LLAGA--THAKYG-TAM 219
+ EP+ L ++ T +
Sbjct: 82 TNLQIPTEPEPESPI------------KLHTEAAGSYAITEPITRESVNIIDPRHNRTVL 129
Query: 220 HMLARNPS-----AFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDV 274
H +A N S + G + D +T L L + + +
Sbjct: 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT-PLMLA-------VLARRRRL 181
Query: 275 LK-LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK- 332
+ L+ + +++ RS H A +R
Sbjct: 182 VAYLMK----------AGAD--------------PTIYNKSERSALHQAAANRDFGMMVY 217
Query: 333 LI--YEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVET 390
++ ++ D E + D +G L + A ++
Sbjct: 218 MLNSTKLKGDIEEL----DRNGMTALMIVAHNEG---------------------RDQVA 252
Query: 391 IVK-------------PSFKEMKNNDGKTP 407
K + K+ + G+T
Sbjct: 253 SAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 8e-08
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
G A V Y+T A A++ + +Q +
Sbjct: 17 EYLIEWKDGHSPSWVPSSYIA------ADVVSEYETPWWTA--ARKAD--EQALSQ---- 62
Query: 105 NLLS-----LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAAL 157
LL DENG TA F A +GS + + + + + + +RGG +T L++AA
Sbjct: 63 -LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG--LTALHMAAG 119
Query: 158 FGQSKMASFL 167
+ + ++ L
Sbjct: 120 YVRPEVVEAL 129
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-05
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 27/133 (20%)
Query: 45 PLYKAALKGDCNEAKRIL-GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGH 103
P + AA K D ++L D AV + +T L A + + V L
Sbjct: 47 PWWTAARKADEQALSQLLEDRD-----VDAVDENGRTALLFV--AGLGS--DKCVRL--- 94
Query: 104 DNLLS------LQD-ENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYI 154
L +D G TA AA E+ + +++ + + RG +T L +
Sbjct: 95 --LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERG---LTALEL 149
Query: 155 AALFGQSKMASFL 167
A ++
Sbjct: 150 AREILKTTPKGNP 162
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 20/137 (14%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L ++L+G+ + +RI+ +G T LH A A ++V+
Sbjct: 40 LLLDSSLEGEFDLVQRII--YEVDDPSLPNDEGI-TALHNAVCAGH----TEIVKF---- 88
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
L+ D +G T AA+ +V++ +F+++ +T
Sbjct: 89 -LVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 147
Query: 157 LFGQSKMASFLYRQNED 173
G ++ + FLY E
Sbjct: 148 EEGYTQCSQFLYGVQEK 164
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 9e-05
Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 19/96 (19%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSL-----QDENGNTAFCFAAAVGSVEIAQFM 133
Q L + ++ ++ + ++ G ++ Q +
Sbjct: 6 QVSLPPG--KRTNL--RKTGSE-----RIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRI 56
Query: 134 LQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ +P+L G +T L+ A G +++ FL
Sbjct: 57 IYEVDDPSLPNDEG---ITALHNAVCAGHTEIVKFL 89
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 | Back alignment and structure |
|---|
Score = 50.5 bits (122), Expect = 1e-07
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 29/134 (21%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
L AA +GD E +R+L + A+ + +T L V +
Sbjct: 5 RLSGAAARGDVQEVRRLLHRE-----LVHPDALNRFGKTALQVM----MFGS-TAIALE- 53
Query: 102 GHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLY 153
LL +QD +G + AA G ++ + +++ + N+ G P++
Sbjct: 54 ----LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTG---ALPIH 106
Query: 154 IAALFGQSKMASFL 167
+A G + + SFL
Sbjct: 107 LAVQEGHTAVVSFL 120
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 4e-06
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+ +H A +T F +++ L+ + D G A G + F
Sbjct: 69 TSPVHDAA---RTGF-LDTLKV-----LVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119
Query: 133 MLQR-NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + + RG +TPL +A G + L
Sbjct: 120 LAAESDLHRRDARG---LTPLELALQRGAQDLVDIL 152
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 1e-07
Identities = 35/267 (13%), Positives = 71/267 (26%), Gaps = 71/267 (26%)
Query: 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTI--RGGGQMTPLYIAALFGQSKM 163
+ E+G+TA A F+L + + + T L++AA+ G++
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST 60
Query: 164 ASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYG-TAMHML 222
LY + G TA+H+
Sbjct: 61 VEKLYAAGAG----------------------------VLVA-------ERGGHTALHLA 85
Query: 223 ARNPSAFTSNCPGWLKVPGIKF-ITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKP 281
R + A + + +D S
Sbjct: 86 CRV---------RAHTC--ACVLLQPRPSHPRDA--------SDTYLTQSQDCTPDTSHA 126
Query: 282 SKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDK 341
+ + + + + +G + H+AV+H+ A+ +L+ + G D
Sbjct: 127 PAAV--DSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD- 183
Query: 342 ELIATYVDVSGNNL----LHLAAQYSN 364
++ LHLA +
Sbjct: 184 ------LNKPEPTCGRTPLHLAVEAQA 204
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-07
Identities = 41/311 (13%), Positives = 83/311 (26%), Gaps = 63/311 (20%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
VT+ T LH+A + F+ ++ + L LQ++ G TA AA +G +
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFF---VS 187
+ + G T L++A A L + + +
Sbjct: 64 LYAAGAGVLVAERGG---HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120
Query: 188 IETGLYGLALQLLKKNKKLLA------GA---THAKYG-TAMHMLARNPSAFTSNCPGWL 237
+T A+ + G T +H+ +
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIH------------ 168
Query: 238 KVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKL----LFDAAHSGN 293
+ E+V+ L + L A +
Sbjct: 169 ---------KD-------AEMVRLL---RDAGADLN-----KPEPTCGRTPLHLAVEAQA 204
Query: 294 FKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGN 353
L +L ++ D GR+ A++ + +L+ G +
Sbjct: 205 ASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPE----DGGDKL 259
Query: 354 NLLHLAAQYSN 364
+ + S+
Sbjct: 260 SPCSSSGSDSD 270
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 16/135 (11%)
Query: 45 PLYKAALKGDCNEAKRIL----------GDDHQSMLRAAVTKGYQTILHVATGAKQTNFV 94
L+ A A +L D + + + V + N
Sbjct: 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEE 140
Query: 95 KQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPL 152
+ E L ++ +G+T A E+ + + + N G TPL
Sbjct: 141 EPRDEDWRLQ--LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCG--RTPL 196
Query: 153 YIAALFGQSKMASFL 167
++A + + L
Sbjct: 197 HLAVEAQAASVLELL 211
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 29/143 (20%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
PL+ A + D + + D + L +T LH+A + ++EL
Sbjct: 161 PLHVAVIHKDAEMVRLLR--DAGADLNKPEPTCGRTPLHLAV---EAQA-ASVLEL---- 210
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
LL + G T A + +A+ + ++P +
Sbjct: 211 -LLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDK---LSPCSSSG 266
Query: 157 LFGQSKMASFLYRQNEDNLEPDD 179
S ++ E DD
Sbjct: 267 SDSDSDNR-------DEGDEYDD 282
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-07
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 24/132 (18%)
Query: 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTG 102
+ G A V Y+T A A++ + +Q +
Sbjct: 16 AMEYLIEWKDGHSPSWVPSSYIA------ADVVSEYETPWWTA--ARKAD--EQALSQ-- 63
Query: 103 HDNLLS-----LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIA 155
LL DENG TA F A +GS + + + + + + +RGG +T L++A
Sbjct: 64 ---LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG--LTALHMA 118
Query: 156 ALFGQSKMASFL 167
A + + ++ L
Sbjct: 119 AGYVRPEVVEAL 130
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 21/136 (15%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L A G + + + + L +G T LH+A G + ++VE
Sbjct: 80 ALLFVAGLGSDKCVRLLA--EAGADLDHRDMRGGLTALHMAAGYVR----PEVVEA---- 129
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158
L+ ++DE G TA A + +Q + G ++ + +F
Sbjct: 130 -LVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI----GLEKVINVLEGQVF 184
Query: 159 GQSKMASFLYRQNEDN 174
+++ + ++ +
Sbjct: 185 EYAEVDEIVEKRGKGK 200
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 50.9 bits (123), Expect = 2e-07
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T L +A V+ M+E L++ D+ G +A +AAAV +V+ A
Sbjct: 93 TTPLILAA----RLAVEGMLED-----LINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ N ++ R TPL++AA G + A L
Sbjct: 144 LLKNGANKDMQNNRE---ETPLFLAAREGSYETAKVL 177
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 48.9 bits (118), Expect = 1e-06
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSL-------QDENGNTAFCFAAAVGSVEIAQ 131
+T LH A A + + ++ L+ + +G T AA + + +
Sbjct: 59 RTPLHAAVSADA----QGVFQI-----LIRNRATDLDARMHDGTTPLILAARLAVEGMLE 109
Query: 132 FMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
++ + N + G + L+ AA A L
Sbjct: 110 DLINSHADVNAVDDLG---KSALHWAAAVNNVDAAVVL 144
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 3e-06
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
++ LH A N + LL +Q+ T AA GS E A+
Sbjct: 126 KSALHWAA---AVNN-VDAAVV-----LLKNGANKDMQNNREETPLFLAAREGSYETAKV 176
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L N ++ P IA + L
Sbjct: 177 LLDHFANRDITDHMD---RLPRDIAQERMHHDIVRLL 210
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 46.2 bits (111), Expect = 8e-06
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+T LH+A A+ + + LL +QD G T A + + + Q
Sbjct: 26 ETALHLA--ARYSR--SDAAKR-----LLEASADANIQDNMGRTPLHAAVSADAQGVFQI 76
Query: 133 MLQ---RNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+++ + + G TPL +AA M L
Sbjct: 77 LIRNRATDLDARMHDG---TTPLILAARLAVEGMLEDL 111
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 4e-05
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSK 162
+L + D G TA AA + A+ +L+ + N+ G TPL+ A
Sbjct: 16 SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMG---RTPLHAAVSADAQG 72
Query: 163 MASFL 167
+ L
Sbjct: 73 VFQIL 77
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 5e-07
Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 32/173 (18%)
Query: 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQ 131
+++ L +A + N V+ + +L L + G TA AA ++E A
Sbjct: 3 WESPLLLAA---KENDVQALSKL-----LKFEGCEVHQRGAMGETALHIAALYDNLEAAM 54
Query: 132 FMLQRNPNLLTIRG-----GGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFV 186
+++ P L+ GQ T L+IA + + L + +
Sbjct: 55 VLMEAAPELVFEPMTSELYEGQ-TALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113
Query: 187 SIETGLYGL-ALQL--LKKNK---KLL--AGA-THAK--YG-TAMHMLARNPS 227
YG L ++ +LL GA A+ G T +H+L P+
Sbjct: 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPN 166
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 4e-06
Identities = 25/168 (14%), Positives = 42/168 (25%), Gaps = 38/168 (22%)
Query: 26 ANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRIL-----------GDDHQSMLRAAV 74
V + L+ A + R L +
Sbjct: 61 PELVFEPMTSELYE--GQTALHIAVINQ-NVNLVRALLARGASVSARATGSVFHYRPHNL 117
Query: 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVE 128
+ L A A + +++V L L+ QD GNT +
Sbjct: 118 IYYGEHPLSFA--ACVGS--EEIVRL-----LIEHGADIRAQDSLGNTVLHILILQPNKT 168
Query: 129 IAQFMLQ------RNPNLLTIRGGGQ---MTPLYIAALFGQSKMASFL 167
A M +L ++ +TP +A + G M L
Sbjct: 169 FACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 29/143 (20%), Positives = 44/143 (30%), Gaps = 27/143 (18%)
Query: 45 PLYKAALKGDCNEAKRIL---GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVEL- 100
L+ AAL EA +L + + QT LH+A + +V
Sbjct: 40 ALHIAALYD-NLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN----VNLVRAL 94
Query: 101 -------------TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRG 145
+ G FAA VGS EI + +++ + G
Sbjct: 95 LARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG 154
Query: 146 GGQMTPLYIAALFGQSKMASFLY 168
T L+I L A +Y
Sbjct: 155 ---NTVLHILILQPNKTFACQMY 174
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 42/150 (28%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL AA + D ++L +T LH+A A N + +
Sbjct: 6 PLLLAAKENDVQALSKLL-KFE----GCEVHQRGAMGETALHIA--ALYDN--LEAAMV- 55
Query: 102 GHDNLLS-----------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPN--------- 139
L+ + G TA A +V + + +L R + +
Sbjct: 56 ----LMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFH 111
Query: 140 --LLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ G+ PL AA G ++ L
Sbjct: 112 YRPHNLIYYGE-HPLSFAACVGSEEIVRLL 140
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 49.3 bits (119), Expect = 9e-07
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
G T + AT K +V+L LLS ++D N +AA G
Sbjct: 106 CQDDGGWTPMIWATEYKH----VDLVKL-----LLSKGSDINIRDNEENICLHWAAFSGC 156
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
V+IA+ +L + + + I G +PL+IAA +
Sbjct: 157 VDIAEILLAAKCDLHAVNIHG---DSPLHIAARENRYDCVVLF 196
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 1e-05
Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
++ LH A A+ + + + L+ E+ T AA +E ++
Sbjct: 12 RSPLHAA--AEAGH--VDICHM-----LVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY 62
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+++ + G T L++AA G ++ +L
Sbjct: 63 LIKAGALVDPKDAEG---STCLHLAAKKGHYEVVQYL 96
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 3e-05
Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 20/110 (18%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
LH A + + E+ LL+ + +G++ AA
Sbjct: 139 IRDNEENICLHWAA---FSGC-VDIAEI-----LLAAKCDLHAVNIHGDSPLHIAARENR 189
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDN 174
+ L R + L G TPL A+L Q A + + +D+
Sbjct: 190 YDCVVLFLSRDSDVTLKNKEG---ETPLQCASLNSQVWSALQMSKALQDS 236
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 9e-05
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 21/104 (20%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
++ +T L A A+ + + V+ L+ +D G+T AA G
Sbjct: 39 TCSEDQRTPLMEA--AENNH--LEAVKY-----LIKAGALVDPKDAEGSTCLHLAAKKGH 89
Query: 127 VEIAQFMLQR---NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
E+ Q++L + N G TP+ A + + L
Sbjct: 90 YEVVQYLLSNGQMDVNCQDDGG---WTPMIWATEYKHVDLVKLL 130
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 1e-04
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Query: 110 QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ +N + AA G V+I ++Q N + + TPL AA + +L
Sbjct: 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ---RTPLMEAAENNHLEAVKYL 63
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 25/145 (17%), Positives = 46/145 (31%), Gaps = 24/145 (16%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L AAL G+ ++ + + +G T LH A +V+
Sbjct: 24 LLLDAALTGELEVVQQAV--KEMNDPSQPNEEG-ITALHNAI----CGANYSIVDF---- 72
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
L++ D +G T AA+ I ++Q T+ G T
Sbjct: 73 -LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDG--ATAFEKCD 129
Query: 157 LF--GQSKMASFLYRQNEDNLEPDD 179
+ G + A++L + +
Sbjct: 130 PYREGYADCATYLADVEQSMGLMNS 154
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 37/172 (21%)
Query: 28 SVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAV-----TKGYQTIL 82
SV + + Y + ++ A + +C E + +L +S R + +T L
Sbjct: 1 SVSAGEKPPRLYDRR--SIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCL 58
Query: 83 HVATGAKQTNF---VKQMVELTGHDNLLSL--------QDENGNTAFCFAAAVGSVEIAQ 131
A + ++++ + L G TA A ++ +
Sbjct: 59 LKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVT 118
Query: 132 FMLQR----------------NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+++ G PL +AA Q + FL
Sbjct: 119 LLVENGADVQAAANGDFFKKTKGRPGFYFG---ELPLSLAACTNQLAIVKFL 167
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 21/146 (14%)
Query: 27 NSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVAT 86
+ + +PL AA K +L + Q +A T+LH
Sbjct: 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALV 192
Query: 87 -----GAKQTNFVKQMV--------ELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFM 133
T FV M +L L + + G T AA+ G + + ++
Sbjct: 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252
Query: 134 LQRNPNLLTIRGGGQMTPLYIAALFG 159
LQR + + + AA
Sbjct: 253 LQREIH--------EPECRHAAAHHH 270
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 28/171 (16%)
Query: 34 NDKKQYSHKCVPLYKAALKGDCN------------EAKRILGDDHQSMLRAAVTKGYQTI 81
+ Y L+ A + + +A ++ R G +
Sbjct: 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFG-ELP 151
Query: 82 LHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLL 141
L +A Q VK +++ + +S +D GNT V + +
Sbjct: 152 LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211
Query: 142 TIRGGGQ---------------MTPLYIAALFGQSKMASFLYRQNEDNLEP 177
+ G + +TPL +AA G+ + +++ ++ E
Sbjct: 212 ILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 1e-06
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 28/133 (21%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGY--QTILHVATGAKQTNFVKQMVELTG 102
L +AA G +E + ++ + A T + + LH+A A+ + E+
Sbjct: 5 KLLEAARAGQDDEVRILM--ANG----APFTTDWLGTSPLHLA--AQYGH--FSTTEV-- 52
Query: 103 HDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYI 154
LL + + T AA+ G I + +L+ + N + MT L+
Sbjct: 53 ---LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK---MTALHW 106
Query: 155 AALFGQSKMASFL 167
A ++ L
Sbjct: 107 ATEHNHQEVVELL 119
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 8e-06
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGS 126
A TK +T LH+A A + + +VE+ LL +D TA +A
Sbjct: 62 ARTKVDRTPLHMA--ASEGH--ANIVEV-----LLKHGADVNAKDMLKMTALHWATEHNH 112
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
E+ + +++ + + + T I+ G +A L
Sbjct: 113 QEVVELLIKYGADVHTQSKFC---KTAFDISIDNGNEDLAEIL 152
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 1e-06
Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 19/160 (11%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGS 126
+ +T LH A + ++VE LL L +D+ G + AA+ G
Sbjct: 35 RTDQDSRTALHWA--CSAGH--TEIVEF-----LLQLGVPVNDKDDAGWSPLHIAASAGX 85
Query: 127 VEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNED-NLEPDDLENTFF 185
EI + +L + ++ + G TPL+ AA + ++A L + + +
Sbjct: 86 DEIVKALLVKGAHVNAVNQNGC-TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMH 144
Query: 186 VSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARN 225
+ G + LL T T +H+
Sbjct: 145 RAAAKGNLKMVHILLFYKASTNIQDTEGN--TPLHLACDE 182
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 47.4 bits (114), Expect = 1e-06
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 22/131 (16%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L +AA GD K++ QS+ + T LH A G +VE
Sbjct: 11 QLLEAAKAGDVETVKKLC--TVQSVNCRDIEGRQSTPLHFAAG----YNRVSVVEY---- 60
Query: 105 NLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
LL +D+ G A + G E+A+ +++ N+ + TPL+ AA
Sbjct: 61 -LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWK---FTPLHEAA 116
Query: 157 LFGQSKMASFL 167
G+ ++ L
Sbjct: 117 AKGKYEICKLL 127
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 40.8 bits (97), Expect = 3e-04
Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 21/103 (20%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGS 126
A KG LH A ++ EL L+ D T AAA G
Sbjct: 70 AKDKGGLVPLHNAC---SYGH-YEVAEL-----LVKHGAVVNVADLWKFTPLHEAAAKGK 120
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
EI + +LQ +P G TPL + G + + L
Sbjct: 121 YEICKLLLQHGADPTKKNRDG---NTPLDLVK-DGDTDIQDLL 159
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 | Back alignment and structure |
|---|
Score = 39.7 bits (94), Expect = 6e-04
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 111 DENGNTAFCFAAAVGSVEIAQFMLQR---NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + AA G VE + + N + R TPL+ AA + + + +L
Sbjct: 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQ---STPLHFAAGYNRVSVVEYL 61
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 2e-06
Identities = 32/133 (24%), Positives = 45/133 (33%), Gaps = 28/133 (21%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL++A L G + K +L H A VT + T L A + V L
Sbjct: 95 PLHEACLGGHLSCVKILL--KH----GAQVNGVTADWHTPLFNACVSGS----WDCVNL- 143
Query: 102 GHDNLLSL-----QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYI 154
LL + + + AA G VE ++ N + G TPLY+
Sbjct: 144 ----LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG---TPLYL 196
Query: 155 AALFGQSKMASFL 167
A Q L
Sbjct: 197 ACENQQRACVKKL 209
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 2e-06
Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 38/138 (27%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---------AVTKGYQTILHVATGAKQTNFVK 95
P+++AA+ G HQ LR +T + + LH A +
Sbjct: 62 PMHEAAIHG------------HQLSLRNLISQGWAVNIITADHVSPLHEA--CLGGH--L 105
Query: 96 QMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQM 149
V++ LL + +T A GS + +LQ ++
Sbjct: 106 SCVKI-----LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-- 158
Query: 150 TPLYIAALFGQSKMASFL 167
+P++ AA G + + L
Sbjct: 159 SPIHEAARRGHVECVNSL 176
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 31/134 (23%)
Query: 45 PLYKAALKGDCNEAKRIL---GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELT 101
PL+ A + G + +L G Q + +H A A++ + + V
Sbjct: 128 PLFNACVSG-SWDCVNLLLQHGASVQP------ESDLASPIHEA--ARRGH--VECVNS- 175
Query: 102 GHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLY 153
L++ + + T A + +L+ + N +G GQ +PL+
Sbjct: 176 ----LIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN----QGKGQDSPLH 227
Query: 154 IAALFGQSKMASFL 167
++A L
Sbjct: 228 AVVRTASEELACLL 241
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 40/131 (30%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---------AVTKGYQTILHVATGAKQTNFVK 95
P+++AA +G H + + T L++A +Q +
Sbjct: 160 PIHEAARRG------------HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ----R 203
Query: 96 QMVELTGHDNLLSL-----QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQ 148
V+ LL Q + ++ S E+A ++ + G
Sbjct: 204 ACVKK-----LLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEG--- 255
Query: 149 MTPLYIAALFG 159
P+ +
Sbjct: 256 KRPVELVPPES 266
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR 136
G Q + + A +F + L + + + + AA G + ++ +
Sbjct: 26 GKQGGMDGSKPAGPRDFPG--IRLLSNPLMG--DAVSDWSPMHEAAIHGHQLSLRNLISQ 81
Query: 137 --NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
N++T ++PL+ A L G L
Sbjct: 82 GWAVNIITADH---VSPLHEACLGGHLSCVKIL 111
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 46.6 bits (112), Expect = 4e-06
Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 26/133 (19%)
Query: 45 PLYKAALKGDCNEAKRIL--GDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTG 102
+++ A +G+ ++ K L GD+ + + T L A + + V
Sbjct: 5 SIHQLAAQGELDQLKEHLRKGDNLVN----KPDERGFTPLIWA--SAFGE--IETVRF-- 54
Query: 103 HDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYI 154
LL + + +A A+ G +I +L+R + N+ G TPL
Sbjct: 55 ---LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNG---GTPLLY 108
Query: 155 AALFGQSKMASFL 167
A K L
Sbjct: 109 AVRGNHVKCVEAL 121
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 3e-05
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
+ K ++ L +A+ +V L LL + D NG T +A
Sbjct: 64 ILAKERESALSLASTGGY----TDIVGL-----LLERDVDINIYDWNGGTPLLYAVRGNH 114
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
V+ + +L R + G TP+ +A G K+ +
Sbjct: 115 VKCVEALLARGADLTTEADSG---YTPMDLAVALGYRKVQQVI 154
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 3e-04
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + AA G ++ + L++ NL+ TPL A+ FG+ + FL
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFL 55
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 46.2 bits (111), Expect = 4e-06
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR-- 136
+H + ++ +N+++ DE G T +AAA G + + +F+LQ
Sbjct: 4 SLSVHQLAAQGEMLYLA---TRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA 60
Query: 137 NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+P LL + L +A G + + L
Sbjct: 61 DPQLLGKGR---ESALSLACSKGYTDIVKML 88
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 44.7 bits (107), Expect = 1e-05
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
+ KG ++ L +A +V++ LL D NG T +A
Sbjct: 64 LLGKGRESALSLACSKGY----TDIVKM-----LLDCGVDVNEYDWNGGTPLLYAVHGNH 114
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
V+ + +L+ +P + T G + +A G + +
Sbjct: 115 VKCVKMLLESGADPTIETDSG---YNSMDLAVALGYRSVQQVI 154
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 43.5 bits (104), Expect = 4e-05
Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 29/134 (21%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVELT 101
+++ A +G+ + + + T L A A +VE
Sbjct: 6 SVHQLAAQGEMLYLATRIEQE------NVINHTDEEGFTPLMWA--AAHGQ--IAVVEF- 54
Query: 102 GHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLY 153
LL L + +A A + G +I + +L + N G TPL
Sbjct: 55 ----LLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG---GTPLL 107
Query: 154 IAALFGQSKMASFL 167
A K L
Sbjct: 108 YAVHGNHVKCVKML 121
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 | Back alignment and structure |
|---|
Score = 41.2 bits (98), Expect = 2e-04
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Query: 113 NGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + AA G + +++ N G TPL AA GQ + FL
Sbjct: 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEG---FTPLMWAAAHGQIAVVEFL 55
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 6e-06
Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T L++A ++ + L+ LQ+ ++ + +A A G EI +
Sbjct: 40 NTPLNIAVHNND----IEIAKA-----LIDRGADINLQNSISDSPYLYAGAQGRTEILAY 90
Query: 133 MLQR---NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
ML+ + N GG L AA G L
Sbjct: 91 MLKHATPDLNKHNRYGG---NALIPAAEKGHIDNVKLL 125
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 9e-06
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 20/101 (19%)
Query: 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVE 128
T +L A K++ E+ L D GNT A +E
Sbjct: 3 TYEVGALLEAAN----QRDTKKVKEI-----LQDTTYQVDEVDTEGNTPLNIAVHNNDIE 53
Query: 129 IAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
IA+ ++ R + N ++ +P A G++++ +++
Sbjct: 54 IAKALIDRGADIN---LQNSISDSPYLYAGAQGRTEILAYM 91
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 8e-06
Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 21/102 (20%)
Query: 74 VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSV 127
+ + + L A A + + + + LL Q+ G TA +G+
Sbjct: 1 MAEPWGNELASA--AARGD--LEQLTS-----LLQNNVNVNAQNGFGRTAL-QVMKLGNP 50
Query: 128 EIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
EIA+ +L R NP+L G ++ AA G L
Sbjct: 51 EIARRLLLRGANPDLKDRTG---FAVIHDAARAGFLDTLQTL 89
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 | Back alignment and structure |
|---|
Score = 44.7 bits (107), Expect = 1e-05
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
++H A + F ++ LL ++D GN AA G + + +F
Sbjct: 71 FAVIHDAA---RAGF-LDTLQT-----LLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 121
Query: 133 MLQR---NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+++ N +G T +A L+G++++ S +
Sbjct: 122 LVKHTASNVGHRNHKG---DTACDLARLYGRNEVVSLM 156
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 | Back alignment and structure |
|---|
Score = 43.5 bits (104), Expect = 3e-05
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 21/97 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+T L V ++ LL L+D G AA G ++ Q
Sbjct: 39 RTALQVMK-----LGNPEIARR-----LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQT 88
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N+ G PL++AA G ++ FL
Sbjct: 89 LLEFQADVNIEDNEG---NLPLHLAAKEGHLRVVEFL 122
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 44.7 bits (107), Expect = 1e-05
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGS 126
AV T L +A ++VE+ LL D G+T AA G
Sbjct: 75 AVDHAGMTPLRLAALFGH----LEIVEV-----LLKNGADVNANDMEGHTPLHLAAMFGH 125
Query: 127 VEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+EI + +L+ + N G T I+ G +A L
Sbjct: 126 LEIVEVLLKNGADVNAQDKFG---KTAFDISIDNGNEDLAEIL 165
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 44.3 bits (106), Expect = 2e-05
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
L A A + V + L++ +D +G T AA G +EI +
Sbjct: 15 GKKLLEAARAGR----DDEVRI-----LMANGADVNAEDASGWTPLHLAAFNGHLEIVEV 65
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N + G MTPL +AALFG ++ L
Sbjct: 66 LLKNGADVNAVDHAG---MTPLRLAALFGHLEIVEVL 99
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 | Back alignment and structure |
|---|
Score = 43.1 bits (103), Expect = 5e-05
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T LH+A A + ++VE+ LL D G T AA G +EI +
Sbjct: 48 WTPLHLA--AFNGH--LEIVEV-----LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEV 98
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N + G TPL++AA+FG ++ L
Sbjct: 99 LLKNGADVNANDMEG---HTPLHLAAMFGHLEIVEVL 132
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Query: 64 DDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123
D Q + + +LH+A + + + + L + +GNTA +AA
Sbjct: 176 DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 235
Query: 124 VGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + +L+ + T+ G+ T L IA + L
Sbjct: 236 YNQPDCLKLLLKGRALVGTVNEAGE-TALDIARKKHHKECEELL 278
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 2e-05
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+T+LH+A + + + VE LL ++D G T A G +++ +
Sbjct: 11 ETLLHIA--SIKGD--IPSVEY-----LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+LQ N + +PL+ AA G + L
Sbjct: 62 LLQHKALVNTTGYQN---DSPLHDAAKNGHVDIVKLL 95
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 | Back alignment and structure |
|---|
Score = 42.4 bits (101), Expect = 5e-05
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 33/136 (24%)
Query: 45 PLYKAALKGDCNEAKRIL--GDDHQSMLRA---AVTKGYQTILHVATGAKQTNFVKQMVE 99
L+ A++KGD + +L G + T LH A ++VE
Sbjct: 13 LLHIASIKGDIPSVEYLLQNG--------SDPNVKDHAGWTPLHEACNHGH----LKVVE 60
Query: 100 LTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTP 151
L LL ++ AA G V+I + +L + N + I G + P
Sbjct: 61 L-----LLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG---LRP 112
Query: 152 LYIAALFGQSKMASFL 167
+ +
Sbjct: 113 VDYTDDESMKSLLLLP 128
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 | Back alignment and structure |
|---|
Score = 42.0 bits (100), Expect = 6e-05
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 111 DENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ G T A+ G + +++LQ +PN+ G TPL+ A G K+ L
Sbjct: 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAG---WTPLHEACNHGHLKVVELL 62
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 40/314 (12%), Positives = 86/314 (27%), Gaps = 49/314 (15%)
Query: 65 DHQSMLRAAVTKGYQ--TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122
+ + + A KG + I VA ++ + + L D ++ + AF AA
Sbjct: 77 NAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136
Query: 123 AVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPD-D 179
G + + + + + I+ +AA G + + L
Sbjct: 137 ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 195
Query: 180 LENTF---FVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGW 236
EN + + ++ G + + LL L H
Sbjct: 196 AENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYG--EKYV------------- 240
Query: 237 LKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL-KLISKPSK-LLFDAAHSGNF 294
P I N A +L + D++ K +L + +
Sbjct: 241 --NPFIARHVNRLKEMHDAFKL-------SNPDGVFDLVTKSECLQGFYMLRNLIRRNDE 291
Query: 295 KFLAVLT--RSYPDL-----VHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATY 347
L + S P + + + + +A+ + L+ + L
Sbjct: 292 VLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLAL---- 347
Query: 348 VDVSGNNLLHLAAQ 361
+ N ++
Sbjct: 348 ---TKANNYYINET 358
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 4/119 (3%)
Query: 246 TNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR--S 303
T N + Q L L + +K D K K + F AA +G L L +
Sbjct: 57 TKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLT 116
Query: 304 YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQY 362
++V + F +A + H + E+ + + + LAA+
Sbjct: 117 SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI--MAMIQAENYHAFRLAAEN 173
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 7e-05
Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 19/97 (19%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+ AT + L+ D+ T +AA +++ ++
Sbjct: 10 TWDIVKATQYGI----YERCRE-----LVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + + L TPL+ A G M L
Sbjct: 61 YISKGAIVDQLGGDLN--STPLHWATRQGHLSMVVQL 95
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 9e-05
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 20/92 (21%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T LH A +Q + MV L+ L D G + AA G I +
Sbjct: 77 STPLHWA--TRQGH--LSMVVQ-----LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAY 127
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSK 162
++ + + +++ G MTPL AA S
Sbjct: 128 LIAKGQDVDMMDQNG---MTPLMWAAYRTHSV 156
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 9e-05
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 20/98 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDE-NGNTAFCFAAAVGSVEIAQ 131
T L A L LL+ L D+ + NTA +A G+ +
Sbjct: 143 MTPLMWAA---YRTHSVDPTRL-----LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVIS 194
Query: 132 FMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ N + I+G + L +A M + L
Sbjct: 195 LLLEAGANVDAQNIKG---ESALDLAKQRKNVWMINHL 229
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 | Back alignment and structure |
|---|
Score = 41.6 bits (99), Expect = 7e-05
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 111 DENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
++GNT AA G E + +L + + N + G TPL++AA G +++ L
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDG---NTPLHLAAKNGHAEIVKLL 61
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 | Back alignment and structure |
|---|
Score = 40.8 bits (97), Expect = 1e-04
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGSVEIAQF 132
T LH A AK + + V+ LLS + ++GNT AA G EI +
Sbjct: 10 NTPLHNA--AKNGH--AEEVKK-----LLSKGADVNARSKDGNTPLHLAAKNGHAEIVKL 60
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L + + N + G TP ++A G ++ L
Sbjct: 61 LLAKGADVNARSKDG---NTPEHLAKKNGHHEIVKLL 94
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 8e-05
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 14/91 (15%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR-- 136
+ + + + Q ++ L + +D T A +G +++
Sbjct: 9 EIVEKIKDE----KSINQNLDF-----LRNYRDSYNRTPLMVACMLGMENAIDKLVENFD 59
Query: 137 NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
I G T L A + +A L
Sbjct: 60 KLEDKDIEG---STALIWAVKNNRLGIAEKL 87
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 42.0 bits (100), Expect = 2e-04
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T L A K + E LLS +D +G T ++ G E++ F
Sbjct: 69 STALIWA--VKNNR--LGIAEK-----LLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYF 119
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ N N + G TPL +A+ +G+S++ L
Sbjct: 120 LLEHGANVNDRNLEG---ETPLIVASKYGRSEIVKKL 153
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 | Back alignment and structure |
|---|
Score = 41.6 bits (99), Expect = 2e-04
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGSVEIAQF 132
+T L + + +M LL ++ G T A+ G EI +
Sbjct: 102 KTPLMWSI---IFGY-SEMSYF-----LLEHGANVNDRNLEGETPLIVASKYGRSEIVKK 152
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + + + G +T A +FG+ ++
Sbjct: 153 LLELGADISARDLTG---LTAEASARIFGRQEVIKIF 186
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 13/127 (10%)
Query: 26 ANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVA 85
A ++ + +PL AA + +L + HQ A T+LH
Sbjct: 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHAL 179
Query: 86 -----TGAKQTNFVKQMVE--------LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
+ + V M + L L + + G T AA G +EI +
Sbjct: 180 VMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239
Query: 133 MLQRNPN 139
+LQR +
Sbjct: 240 ILQREFS 246
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 31/162 (19%)
Query: 34 NDKKQYSHKCVPLYKAALKGDCNEAKRIL----------GDDHQSMLRAAVTKGYQTILH 83
++ L+ A K K ++ + + L
Sbjct: 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLS 141
Query: 84 VATGAKQTNFVKQMVELTGHDNLLSLQDENGNT----------------AFCFAAAVGSV 127
+A KQ + V ++E L D GNT A G +
Sbjct: 142 LAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201
Query: 128 EIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
++ + + +G +TPL +AA G+ ++ +
Sbjct: 202 QMGARLCPTVQLEEISNHQG---LTPLKLAAKEGKIEIFRHI 240
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 | Back alignment and structure |
|---|
Score = 41.2 bits (98), Expect = 1e-04
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 80 TILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQFM 133
L A A Q V + L++ +DE G T A A G +EI + +
Sbjct: 16 KKLLEAARAGQ----DDEVRI-----LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVL 66
Query: 134 LQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
L+ + N + G TPL++AA G ++A L
Sbjct: 67 LKNGADVNAVDAIG---FTPLHLAAFIGHLEIAEVL 99
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 | Back alignment and structure |
|---|
Score = 40.4 bits (96), Expect = 2e-04
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
T L++AT + ++VE+ LL D G T AA +G +EIA+
Sbjct: 48 LTPLYLAT----AHGHLEIVEV-----LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEV 98
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N G T I+ G +A L
Sbjct: 99 LLKHGADVNAQDKFG---KTAFDISIGNGNEDLAEIL 132
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 40.4 bits (96), Expect = 2e-04
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAVGSVEIAQF 132
+T LH+A A+ + ++V+L LL +D+NG T AA G +E+ +
Sbjct: 36 RTPLHLA--ARNGH--LEVVKL-----LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N G TPL++AA G ++ L
Sbjct: 87 LLEAGADVNAKDKNG---RTPLHLAARNGHLEVVKLL 120
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 40.4 bits (96), Expect = 2e-04
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
+T LH+A A+ + ++V+L LL +D+NG T AA G +E+ +
Sbjct: 3 RTPLHLA--ARNGH--LEVVKL-----LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 53
Query: 133 MLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ + N G TPL++AA G ++ L
Sbjct: 54 LLEAGADVNAKDKNG---RTPLHLAARNGHLEVVKLL 87
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 2e-04
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAVGSVEIAQF 132
L A A Q V + L++ +D+NG+T AA G +E+ +
Sbjct: 25 GKKLLEAARAGQ----DDEVRI-----LMANGADVAAKDKNGSTPLHLAARNGHLEVVKL 75
Query: 133 MLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+L+ ++ G+ T I+ G +A L
Sbjct: 76 LLEAGADVXAQDKFGK-TAFDISIDNGNEDLAEIL 109
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 40.1 bits (95), Expect = 3e-04
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 110 QDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ + AAA G VE + +L+ +PN L G P+ + G +++A L
Sbjct: 8 LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG---RRPIQVMM-MGSAQVAELL 63
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 | Back alignment and structure |
|---|
Score = 39.3 bits (93), Expect = 5e-04
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 113 NGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFL 167
+ F +A G ++ + + + + N G PL+ AA GQ ++ FL
Sbjct: 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG---RKPLHYAADCGQLEILEFL 59
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 25/112 (22%)
Query: 73 AVTKGYQTILHVAT--GAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAV 124
+ TK T+ G ++ ++ L +
Sbjct: 70 SRTKEGTTLFFPLFQGGGNDITGTTELCKI-----FLEKGADITALYKPYKIVVFKNIFN 124
Query: 125 GSVEIAQFMLQRNPNLLTIRGG---------GQMTPLYIAALFGQSKMASFL 167
V+ + + L+ + G G T L + +
Sbjct: 125 YFVDENE--MIPLYKLIFSQSGLQLLIKDKWGL-TALEFVKRCQKPIALKMM 173
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSM-LRAAVTKGYQTILHVATGAK-----QTNFVKQMV 98
PL AA + + + H+ LR ++G T+LH T FV +M
Sbjct: 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN-TVLHALVAIADNTRENTKFVTKMY 201
Query: 99 EL--------TGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR 136
+L NL +L + +G + AA G + I Q +++R
Sbjct: 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR 247
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 9e-04
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 30/152 (19%)
Query: 35 DKKQYSHKCVPLYKAAL--KGDCNEAKRIL------GDDHQSMLRAAVTKGY---QTILH 83
+ ++ S L KA L N+ IL + + + + Y QT LH
Sbjct: 39 EFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALH 98
Query: 84 VATGAKQTNFVKQMVE-----------LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
+A + ++V+ +VE G AA I +
Sbjct: 99 IAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158
Query: 133 MLQR-----NPNLLTIRGGGQMTPLYIAALFG 159
+ + + RG T L+
Sbjct: 159 LTENGHKQADLRRQDSRG---NTVLHALVAIA 187
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 8e-04
Identities = 26/138 (18%), Positives = 42/138 (30%), Gaps = 37/138 (26%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRA-----AVTKGYQTILHVAT-GAKQTNFVKQMV 98
L AA +G E + L L A A + + V G+ +
Sbjct: 15 WLATAAARGRVEEVR-AL-------LEAGANPNAPNSYGRRPIQVMMMGSARV------A 60
Query: 99 ELTGHDNLLS------LQDENGNT-AFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQM 149
EL LL D T AA G ++ + + ++ G
Sbjct: 61 EL-----LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG---R 112
Query: 150 TPLYIAALFGQSKMASFL 167
P+ +A G +A +L
Sbjct: 113 LPVDLAEELGHRDVARYL 130
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 100.0 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 100.0 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 100.0 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 100.0 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 100.0 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 100.0 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 100.0 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 100.0 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 100.0 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.98 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.97 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.97 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.97 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.97 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.97 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.97 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.97 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.97 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.97 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.96 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.96 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.96 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.95 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.95 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.95 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.95 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.95 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.95 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.95 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.95 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.95 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.95 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.95 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.95 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.95 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.94 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.94 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.94 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.94 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.94 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.94 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.94 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.94 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.93 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.93 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.92 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.91 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.91 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.91 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.91 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.9 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.9 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.9 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.89 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.89 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.88 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.88 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.88 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.87 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.87 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.87 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.86 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.86 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.86 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.85 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.85 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.84 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.83 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.82 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.82 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.8 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.8 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.79 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.79 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.77 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.77 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.76 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.72 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.66 |
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=416.20 Aligned_cols=354 Identities=21% Similarity=0.230 Sum_probs=240.8
Q ss_pred cccceeecCCCCCCCCCCcCCCC---cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCC
Q 007858 14 QEISISITGRDPANSVQPLQNDK---KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQ 90 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~ 90 (587)
..+..++...+.+....+++.+. ..+..|.||||.|+..|+.+++++|+ +.+.+++.. +.+|.||||+|+..|+
T Consensus 16 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~g~ 92 (437)
T 1n11_A 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLL--QNKAKVNAK-AKDDQTPLHCAARIGH 92 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHH--HHTCCSSCC-CTTSCCHHHHHHHHTC
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH--hCCCCCCCC-CCCCCCHHHHHHHCCC
Confidence 44555555444444444444432 34567889999999999999999998 567778776 8889999999999999
Q ss_pred HHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhc
Q 007858 91 TNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQ 170 (587)
Q Consensus 91 ~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (587)
.++|++|+++| ++ ++..|..|.||||+|++.|+.+++++|++++++. ...+..|.||||+|+..|+.+++++|+++
T Consensus 93 ~~~v~~Ll~~g--a~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 93 TNMVKLLLENN--AN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp HHHHHHHHHHT--CC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHhCC--CC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 99999999988 77 8888888999999999999999999998888885 77788888888888888888888888888
Q ss_pred CC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccC
Q 007858 171 NE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNT 249 (587)
Q Consensus 171 ~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
++ .+..+.+|.||||.|+..++.+++++|+++ +..++..+.+|.||||+|+..++
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~---------------------- 224 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQ---------------------- 224 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHHHTTC----------------------
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCC----------------------
Confidence 87 777888888888888888888888888887 66777778888888888888876
Q ss_pred CCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChh
Q 007858 250 DSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHAD 329 (587)
Q Consensus 250 ~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 329 (587)
.++++.|++.+.+++..+. .|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..|+.+
T Consensus 225 ------~~~~~~Ll~~g~~~~~~~~-----~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~ 292 (437)
T 1n11_A 225 ------VEVARSLLQYGGSANAESV-----QGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVP 292 (437)
T ss_dssp ------HHHHHHHHHTTCCTTCCCT-----TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHH
T ss_pred ------HHHHHHHHHcCCCCCCCCC-----CCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHH
Confidence 5555555555554443322 445555555555555555555555555 3445555555555555555555
Q ss_pred HHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC--C-----------CchHHHHHHhhhHHHHHHh-cccc
Q 007858 330 TFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV--P-----------GAALEMQQELKTFKEVETI-VKPS 395 (587)
Q Consensus 330 iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l--~-----------~~~~~~~~~l~~~~~v~~l-~~~~ 395 (587)
++++|+++|++++ .+|..|+||||+|+..|+.+++++| . ..+++........+.|+.| .+|+
T Consensus 293 ~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 293 VADVLIKHGVMVD----ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368 (437)
T ss_dssp HHHHHHHHTCCTT----CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHhCCccCC----CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC
Confidence 5555555554433 3455555555555555554444333 0 0111222222222233333 3677
Q ss_pred cccccCCCCCCchhhhHHh
Q 007858 396 FKEMKNNDGKTPWELFTDE 414 (587)
Q Consensus 396 ~~~~~n~~g~t~l~~a~~~ 414 (587)
+++.+|.+|+||+++|.+.
T Consensus 369 ~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 369 SPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp CSCCCCSSSCCHHHHHHHT
T ss_pred CCCCCCCCCCCHHHHHHHc
Confidence 8888888888888887654
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=415.53 Aligned_cols=330 Identities=19% Similarity=0.193 Sum_probs=297.1
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+..|+||||.|+..|+.++|++|+ +.+.+++.. +..|.||||+|+..|+.++|++|++++ ++ ++.+|..|.||
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll--~~g~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~ 83 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLL--QRGASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNK--AK-VNAKAKDDQTP 83 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHH--HTTCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHT--CC-SSCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHH--HcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CC-CCCCCCCCCCH
Confidence 5678999999999999999999999 668888877 889999999999999999999999999 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
||+|++.|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.++ .+..+..|.||||.|+..|+.+++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 162 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA 162 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999995 8999999999999999999999999999998 777889999999999999999999
Q ss_pred HHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh
Q 007858 197 LQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK 276 (587)
Q Consensus 197 ~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 276 (587)
++|+++ +..++..+..|.||||+|+..++ .+++++|++++.+++..+
T Consensus 163 ~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~----------------------------~~~v~~Ll~~g~~~~~~~--- 209 (437)
T 1n11_A 163 ELLLER--DAHPNAAGKNGLTPLHVAVHHNN----------------------------LDIVKLLLPRGGSPHSPA--- 209 (437)
T ss_dssp HHHHHT--TCCTTCCCSSCCCHHHHHHHTTC----------------------------HHHHHHHGGGTCCSCCCC---
T ss_pred HHHHhC--CCCCCCCCCCCCCHHHHHHHcCC----------------------------HHHHHHHHhCCCCCCCcC---
Confidence 999998 88889999999999999999998 999999999998877654
Q ss_pred hccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHH
Q 007858 277 LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLL 356 (587)
Q Consensus 277 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 356 (587)
..|.||||.|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||
T Consensus 210 --~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~g~t~L 282 (437)
T 1n11_A 210 --WNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN----LGNKSGLTPL 282 (437)
T ss_dssp --TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCTTCCCHH
T ss_pred --CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC----CCCCCCCCHH
Confidence 3789999999999999999999999999 79999999999999999999999999999999876 6999999999
Q ss_pred HHHHHcCCCCCCCCC-------------CCchHHHHHHhhhHHHHHHhc-ccccccccCCCCCCchhhhHHh
Q 007858 357 HLAAQYSNPKPISKV-------------PGAALEMQQELKTFKEVETIV-KPSFKEMKNNDGKTPWELFTDE 414 (587)
Q Consensus 357 hlA~~~~~~~~~~~l-------------~~~~~~~~~~l~~~~~v~~l~-~~~~~~~~n~~g~t~l~~a~~~ 414 (587)
|+|+..|+.++++.| ...++.........+.|+.++ ++++++.+|..|+||||+|.+.
T Consensus 283 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC
Confidence 999999998776654 123455555555566677666 6899999999999999999764
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=368.22 Aligned_cols=300 Identities=17% Similarity=0.209 Sum_probs=263.8
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCC
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGN 115 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~ 115 (587)
.+.+.+|.|+||.|++.|+.++|+.|| +++++++.+.+..|.||||+|+..|+.++|++|+++| ++ ++.++..+.
T Consensus 19 ~~~~~~~~t~L~~Av~~g~~~~V~~LL--~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g--a~-~~~~~~~~~ 93 (337)
T 4g8k_A 19 RRAAVEDNHLLIKAVQNEDVDLVQQLL--EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--AD-PVLRKKNGA 93 (337)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHH--HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCC
T ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHH--HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC--Cc-hhhhccCCC
Confidence 345667899999999999999999999 6789999874456999999999999999999999999 88 999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC----------CCCCCchHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNL----------EPDDLENTF 184 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~----------~~~~g~t~l 184 (587)
+|++.++..++.+++..+++.++++ +.+|..|.||||+|+..|+.+++++|+++++ .+. .+..|.|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L 172 (337)
T 4g8k_A 94 TPFILAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 172 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHH
T ss_pred chhHHHHhcccchhhHHhhhccchh-hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHH
Confidence 9999999999999999999999996 8999999999999999999999999999987 443 456789999
Q ss_pred HHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHH
Q 007858 185 FVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWK 264 (587)
Q Consensus 185 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~ 264 (587)
|.|+..|+.++++.|+++ .+.+++.+|..|.|++|.++..+.. ....+++++|++
T Consensus 173 ~~A~~~g~~~~v~~LL~~-~gad~n~~d~~g~t~l~~~~~~~~~------------------------~~~~~i~~lLl~ 227 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDE-MGADVNACDNMGRNALIHALLSSDD------------------------SDVEAITHLLLD 227 (337)
T ss_dssp HHHHHHTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHHSCT------------------------TTHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhc-cCCCcCccCCCCCcHHHHHHHHcCc------------------------ccHHHHHHHHHH
Confidence 999999999999999987 7899999999999999988765430 111578899999
Q ss_pred HhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHh-CCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhh
Q 007858 265 EISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRS-YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKEL 343 (587)
Q Consensus 265 ~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 343 (587)
+|++++..+. .|.||||.|+..|+.++++.|++. +.+ ++.+|.+|+||||+|+.+|+.+++++|+++|++++
T Consensus 228 ~gad~n~~d~-----~g~t~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n- 300 (337)
T 4g8k_A 228 HGADVNVRGE-----RGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTD- 300 (337)
T ss_dssp TTCCTTCCCG-----GGCCHHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-
T ss_pred CCCCCCCcCC-----CCCCHHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-
Confidence 9999887654 789999999999999999999986 566 79999999999999999999999999999999865
Q ss_pred hhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhccccccccc
Q 007858 344 IATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMK 400 (587)
Q Consensus 344 ~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~ 400 (587)
+.||||+|+..++.++++.| +.+|+++|..
T Consensus 301 --------~~~~L~~A~~~~~~~iv~~L-------------------l~~GA~~d~~ 330 (337)
T 4g8k_A 301 --------CGDLVMTARRNYDHSLVKVL-------------------LSHGAKEDFH 330 (337)
T ss_dssp --------TCCHHHHHHHTTCHHHHHHH-------------------HHTTCCC---
T ss_pred --------CCCHHHHHHHcCCHHHHHHH-------------------HHCcCCCCCC
Confidence 45799999999997776665 5588888764
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=366.46 Aligned_cols=307 Identities=19% Similarity=0.155 Sum_probs=257.7
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+..+.++||.|+..|+.+.++.++ .+.+.+++.. |..|.||||+|+..|+.++|++|++.| ++ ++.+|..|.||
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~ 94 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALL-TPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQHG--AD-VHAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHC-CTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCCH
T ss_pred eccccchhHHHHHHcCCHHHHHHHH-HhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCccCCCCCcH
Confidence 3567789999999999999999999 7778888877 899999999999999999999999999 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++++ ++..+..|.++++.++..+..+.+
T Consensus 95 L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~ 173 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHH
Confidence 99999999999999999999996 8899999999999999999999999999999 888999999999999888777776
Q ss_pred HHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh
Q 007858 197 LQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK 276 (587)
Q Consensus 197 ~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 276 (587)
...... +++..++..++ .+.++.++........
T Consensus 174 ~~~~~~--------------~~~~~~~~~~~----------------------------~~~~~~~l~~~~~~~~----- 206 (351)
T 3utm_A 174 TYEFKG--------------HSLLQAAREAD----------------------------LAKVKKTLALEIINFK----- 206 (351)
T ss_dssp HHHHHH--------------HHHHHHHHTTC----------------------------HHHHHHHTTTCCTTCC-----
T ss_pred Hhhhcc--------------cHHHHHHHhcc----------------------------HHHHHHHHHhhccccc-----
Confidence 665543 34555565554 5666555544332211
Q ss_pred hccCCChHHHHHHHc---CcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCC
Q 007858 277 LISKPSKLLFDAAHS---GNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGN 353 (587)
Q Consensus 277 ~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 353 (587)
.+..|.||||.|+.. +..+++++|++++++ ++.+|.+|+||||+|+.+|+.+++++|+++|++++ .+|..|+
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n----~~d~~g~ 281 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN----ALDSLGQ 281 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSC
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CcCCCCC
Confidence 224678899999988 668888999998888 68888889999999999999999999999888865 6888899
Q ss_pred cHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhhHHhhhHHHHH
Q 007858 354 NLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDEHKTLLEE 421 (587)
Q Consensus 354 TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~~~~~~l~~~ 421 (587)
||||+|+..|+.++++.| +..|++++.+|.+|+||+++|.+...+++.+
T Consensus 282 t~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~~~~g~tal~~a~~~~~~~l~~ 330 (351)
T 3utm_A 282 TALHRAALAGHLQTCRLL-------------------LSYGSDPSIISLQGFTAAQMGNEAVQQILSE 330 (351)
T ss_dssp CHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred CHHHHHHHcCcHHHHHHH-------------------HHcCCCCCCcCCCCCChhhhhhHHHHHHHHh
Confidence 999999998887666555 5578888889999999999886665555443
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=340.67 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=244.6
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
.+|.|+||.|+..|+.++++.|+ +.+.+++...+..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll--~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLL--EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--AD-PVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH--HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHH--HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CC-CcccCCCCCCHHH
Confidence 35789999999999999999999 6677887765788999999999999999999999998 88 8999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCC----------CCCCchHHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLE----------PDDLENTFFVSI 188 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~----------~~~g~t~l~~a~ 188 (587)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.++ .+.. +..|.||||.|+
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 999999999999999999996 8999999999999999999999999999998 5554 788999999999
Q ss_pred HhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhc
Q 007858 189 ETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK 268 (587)
Q Consensus 189 ~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~ 268 (587)
..|+.++++.|++. .+..++..|..|.||||+|+..++. ....+++++|++.|.+
T Consensus 157 ~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~------------------------~~~~~i~~~Ll~~g~~ 211 (285)
T 1wdy_A 157 EKGHVEVLKILLDE-MGADVNACDNMGRNALIHALLSSDD------------------------SDVEAITHLLLDHGAD 211 (285)
T ss_dssp HHTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHHHHCSCT------------------------TTHHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHh-cCCCCCccCCCCCCHHHHHHHcccc------------------------chHHHHHHHHHHcCCC
Confidence 99999999999998 7899999999999999999998751 1226899999999998
Q ss_pred cchhhhhhhccCCChHHHHHHHcCcHHHHHHHHH-hCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 269 STHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR-SYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 269 ~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
++..+. .|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 212 ~~~~~~-----~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 212 VNVRGE-----RGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp SSCCCT-----TSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred CCCcCC-----CCCcHHHHHHHcCCHHHHHHHHhccCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 886653 78999999999999999999999 6777 79999999999999999999999999999999976
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=335.80 Aligned_cols=264 Identities=19% Similarity=0.187 Sum_probs=241.4
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccC-CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 76 KGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQ-DENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 76 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~-d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
.+|.||||.|++.|+.++|++|++.+ .+ ++.+ +..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGG--AN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcC--CC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 35789999999999999999999998 78 7776 888999999999999999999999999995 8899999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccc----------ccCCchHHHHHh
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGAT----------HAKYGTAMHMLA 223 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~----------d~~g~t~Lh~a~ 223 (587)
|+..|+.+++++|+++++ .+..+..|.||||.|+..++.+++++|+++ +..++.. +..|.||||.|+
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh--CCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 999999999999999998 888899999999999999999999999998 6666555 788999999999
Q ss_pred hCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHH-hhccchhhhhhhccCCChHHHHHHHcCc----HHHHH
Q 007858 224 RNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE-ISKSTHKDVLKLISKPSKLLFDAAHSGN----FKFLA 298 (587)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~----~~iv~ 298 (587)
..++ .+++++|+++ +.+++..+ ..|.||||.|+..++ .++++
T Consensus 157 ~~~~----------------------------~~~v~~Ll~~~~~~~~~~~-----~~g~t~l~~a~~~~~~~~~~~i~~ 203 (285)
T 1wdy_A 157 EKGH----------------------------VEVLKILLDEMGADVNACD-----NMGRNALIHALLSSDDSDVEAITH 203 (285)
T ss_dssp HHTC----------------------------HHHHHHHHHTSCCCTTCCC-----TTSCCHHHHHHHCSCTTTHHHHHH
T ss_pred HcCC----------------------------HHHHHHHHHhcCCCCCccC-----CCCCCHHHHHHHccccchHHHHHH
Confidence 9997 9999999998 88777654 478999999999999 99999
Q ss_pred HHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHh-cCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHH
Q 007858 299 VLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE-MGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALE 377 (587)
Q Consensus 299 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~ 377 (587)
+|++++++ ++.+|..|+||||+|+..|+.+++++|++ .|++++ .+|.+|+||||+|+..++.++++.|
T Consensus 204 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~----~~~~~g~t~l~~A~~~~~~~i~~~L------ 272 (285)
T 1wdy_A 204 LLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN----DTDSDGKTALLLAVELKLKKIAELL------ 272 (285)
T ss_dssp HHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT----CCCTTSCCHHHHHHHTTCHHHHHHH------
T ss_pred HHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc----ccCCCCCcHHHHHHHcCcHHHHHHH------
Confidence 99999999 79999999999999999999999999999 888866 7999999999999999997766655
Q ss_pred HHHHhhhHHHHHHhcccccccccCC
Q 007858 378 MQQELKTFKEVETIVKPSFKEMKNN 402 (587)
Q Consensus 378 ~~~~l~~~~~v~~l~~~~~~~~~n~ 402 (587)
+.+|++++.+|.
T Consensus 273 -------------l~~Ga~~~~~d~ 284 (285)
T 1wdy_A 273 -------------CKRGASTDCGDL 284 (285)
T ss_dssp -------------HHHSSCSCCSSC
T ss_pred -------------HHcCCCCCcccc
Confidence 557888888773
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=328.10 Aligned_cols=260 Identities=12% Similarity=0.081 Sum_probs=206.4
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcC----------ccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDH----------QSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNL 106 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~----------~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~l 106 (587)
.-+..|.|+||+|+..|+.+.+..++ ... ...++.. |.+|.||||+|+..|+.++|++|++.+ .+
T Consensus 10 ~~~~~~~~~lH~Aa~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~- 84 (285)
T 3d9h_A 10 HSSGLVPRGSHMASMDGKQGGMDGSK-PAGPRDFPGIRLLSNPLMGD-AVSDWSPMHEAAIHGHQLSLRNLISQG--WA- 84 (285)
T ss_dssp ---------------------------------CCSEECCCCTTCSS-SCCSCCHHHHHHHTTCHHHHHHHHHTT--CC-
T ss_pred ccchHHHHHHHHHhhcCCCCCcccCC-CCccccccchhhhhCcccCC-CccCCCHHHHHHHcCCHHHHHHHHHCC--CC-
Confidence 34678999999999999988888865 222 1223444 889999999999999999999999998 88
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHH
Q 007858 107 LSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFF 185 (587)
Q Consensus 107 l~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~ 185 (587)
++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.++ .+ .+.+|.||||
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~L~ 162 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIH 162 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-CSCTTSCHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC-CCCCCCCHHH
Confidence 9999999999999999999999999999999996 8999999999999999999999999999998 43 3556999999
Q ss_pred HHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHH
Q 007858 186 VSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE 265 (587)
Q Consensus 186 ~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ 265 (587)
.|+..|+.++++.|++. +..++.+|..|.||||+|+..++ .+++++|++.
T Consensus 163 ~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~----------------------------~~~v~~Ll~~ 212 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQ----------------------------RACVKKLLES 212 (285)
T ss_dssp HHHHHTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTC----------------------------HHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCc----------------------------HHHHHHHHHC
Confidence 99999999999999997 88888999999999999999997 8999999999
Q ss_pred hhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhc-Ccchh
Q 007858 266 ISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEM-GFDKE 342 (587)
Q Consensus 266 ~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~ 342 (587)
|++++. +..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+ ++.+++++|+++ |+++.
T Consensus 213 ga~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 213 GADVNQ------GKGQDSPLHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp TCCTTC------CBTTBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred CCCCCC------CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 988873 34789999999999999999999999999 7999999999999999 567999999998 66543
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=351.50 Aligned_cols=280 Identities=15% Similarity=0.175 Sum_probs=225.2
Q ss_pred HhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCC-CCCCcHHHHHHH
Q 007858 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFCFAAA 123 (587)
Q Consensus 45 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~ 123 (587)
++.-+...|+.+.++.++ . +. .+..|.||||.|+..|+ +++++|+.. + ++.+| ..|.||||+|+.
T Consensus 69 ~~~~~~~~g~~~~~~~~~-~------~~-~~~~g~t~L~~Aa~~~~-~~~~~L~~~----~-~n~~d~~~g~t~Lh~Aa~ 134 (373)
T 2fo1_E 69 YGNGNDFLGDFNHTNLQI-P------TE-PEPESPIKLHTEAAGSY-AITEPITRE----S-VNIIDPRHNRTVLHWIAS 134 (373)
T ss_dssp ---------------------------------CCCHHHHHHHSSS-CCCSCCSTT----T-TTTCCCSSCCCHHHHHHC
T ss_pred cCCCCCcccccccccccc-c------cC-CCCCCccHHHHHhcCCc-hHHHHhccc----c-ccccCCcCCCCHHHHHHH
Confidence 345555666666666555 1 12 27889999999999665 788887643 4 77888 789999999999
Q ss_pred cCCHHHHHHHH--------hcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHH
Q 007858 124 VGSVEIAQFML--------QRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYG 194 (587)
Q Consensus 124 ~g~~~iv~~Ll--------~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~ 194 (587)
.|+.+++++|+ +.|+++ +.+|.+|.||||+|+..|+.+++++|+++++ .+..+.+|.||||.|+..|+.+
T Consensus 135 ~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 213 (373)
T 2fo1_E 135 NSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 213 (373)
T ss_dssp TTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHH
Confidence 99998888776 789996 8999999999999999999999999999998 8889999999999999999999
Q ss_pred HHHHHHHhccc---ccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccch
Q 007858 195 LALQLLKKNKK---LLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271 (587)
Q Consensus 195 ~v~~Ll~~~~~---~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~ 271 (587)
++++|++. + ...+..|..|.||||+|+..+. ....+++++|++.|.+++.
T Consensus 214 ~v~~Ll~~--~~~~~~~~~~d~~g~t~L~~A~~~~~-------------------------~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 214 MMVYMLNS--TKLKGDIEELDRNGMTALMIVAHNEG-------------------------RDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp HHHHHTTS--HHHHHTTSCCCTTSCCHHHHHHHSCS-------------------------TTHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHhc--CccccChhhcCCCCCCHHHHHHHhCC-------------------------cchHHHHHHHHHCCCCccc
Confidence 99999987 4 6788899999999999998872 0018999999999998875
Q ss_pred hhhh---hhccCCChHHHHHHHcCcHHHHHHHHHhC-CCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhh
Q 007858 272 KDVL---KLISKPSKLLFDAAHSGNFKFLAVLTRSY-PDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATY 347 (587)
Q Consensus 272 ~~~~---~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~ 347 (587)
.... ..+..|.||||+|+..|+.+++++|++++ .+ ++.+|.+|+||||+|+.+|+.+++++|+++|++++ .
T Consensus 267 ~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~----~ 341 (373)
T 2fo1_E 267 DGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE----A 341 (373)
T ss_dssp CSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS----C
T ss_pred ccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----C
Confidence 3321 23457899999999999999999999997 66 79999999999999999999999999999999976 6
Q ss_pred ccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 348 VDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 348 ~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+|..|+||||+|+..|+.+++++|
T Consensus 342 ~d~~g~t~l~~A~~~g~~~iv~~L 365 (373)
T 2fo1_E 342 VDATDHTARQLAQANNHHNIVDIF 365 (373)
T ss_dssp CCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999997766555
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=330.83 Aligned_cols=272 Identities=19% Similarity=0.169 Sum_probs=239.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCC-CCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDE-NGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~-~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~ 153 (587)
+.+|+|+||.|++.|+.++|++|+++| ++ ++.++. .|.||||+|++.|+.++|++|+++|+++ +.++..+.+|++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~G--ad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~-~~~~~~~~~~~~ 97 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGG--AN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHT--CC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCC--CC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-hhhccCCCchhH
Confidence 345789999999999999999999999 88 888875 4999999999999999999999999995 899999999999
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhccccccc----------ccccCCchHHHHH
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAG----------ATHAKYGTAMHML 222 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~----------~~d~~g~t~Lh~a 222 (587)
.++..++.+++..+++.+. .+..+..|.||+|.|+..|+.++++.|+++ ++.++ ..+..|.||||+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~--ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc--CCCcchhhccccccccccCCCCcHHHHH
Confidence 9999999999999999998 888999999999999999999999999997 54443 3456799999999
Q ss_pred hhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHH-hhccchhhhhhhccCCChHHHHHHHcCc----HHHH
Q 007858 223 ARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE-ISKSTHKDVLKLISKPSKLLFDAAHSGN----FKFL 297 (587)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~----~~iv 297 (587)
+..|+ .+++++|+++ |++++..+ ..|.|++|.++..+. .+++
T Consensus 176 ~~~g~----------------------------~~~v~~LL~~~gad~n~~d-----~~g~t~l~~~~~~~~~~~~~~i~ 222 (337)
T 4g8k_A 176 AEKGH----------------------------VEVLKILLDEMGADVNACD-----NMGRNALIHALLSSDDSDVEAIT 222 (337)
T ss_dssp HHHTC----------------------------HHHHHHHHHHSCCCTTCCC-----TTSCCHHHHHHHHSCTTTHHHHH
T ss_pred HHCCC----------------------------HHHHHHHHhccCCCcCccC-----CCCCcHHHHHHHHcCcccHHHHH
Confidence 99998 9999999975 78877655 378999998876543 5688
Q ss_pred HHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhc-CcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchH
Q 007858 298 AVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEM-GFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAAL 376 (587)
Q Consensus 298 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~ 376 (587)
++|+++|++ ++.+|.+|+||||+|+..|+.++++.|++. |++++ .+|.+|+||||+|++.|+.++++.|
T Consensus 223 ~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn----~~d~~G~TpL~~A~~~g~~~iv~~L----- 292 (337)
T 4g8k_A 223 HLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN----DTDSDGKTALLLAVELKLKKIAELL----- 292 (337)
T ss_dssp HHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT----CBCTTSCBHHHHHHHTTCHHHHHHH-----
T ss_pred HHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc----CcCCCCCCHHHHHHHcCCHHHHHHH-----
Confidence 999999999 799999999999999999999999999985 67755 7999999999999999997776655
Q ss_pred HHHHHhhhHHHHHHhcccccccccCCCCCCchhhhHHh
Q 007858 377 EMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFTDE 414 (587)
Q Consensus 377 ~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~~~ 414 (587)
+.+|++++ +++||++|.+.
T Consensus 293 --------------l~~GAd~n-----~~~~L~~A~~~ 311 (337)
T 4g8k_A 293 --------------CKRGASTD-----CGDLVMTARRN 311 (337)
T ss_dssp --------------HTTSCSST-----TCCHHHHHHHT
T ss_pred --------------HHCCCCCC-----CCCHHHHHHHc
Confidence 55787765 45699999764
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=339.92 Aligned_cols=261 Identities=15% Similarity=0.152 Sum_probs=227.9
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHH--------HccCCCCcc
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMV--------ELTGHDNLL 107 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll--------~~~~~~~ll 107 (587)
...+..|.||||.|+..|+ ++++.|+ . .+++...+..|.||||+|+..|+.++|++|+ +.| ++ +
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~--~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~g--a~-v 159 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPIT--R--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG--AD-V 159 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCS--T--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC--CC-T
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhc--c--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcC--CC-C
Confidence 3567889999999999654 7777776 2 4666662378999999999999998888776 677 88 9
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC---C-CCCCCCCCchH
Q 007858 108 SLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN---E-DNLEPDDLENT 183 (587)
Q Consensus 108 ~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~---~-~~~~~~~g~t~ 183 (587)
+.+|..|.||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|++++ . .+..+.+|.||
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~ 238 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA 238 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH
Confidence 999999999999999999999999999999996 899999999999999999999999999987 3 77789999999
Q ss_pred HHHHHHhC---cHHHHHHHHHhcccccccc--------cccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCc
Q 007858 184 FFVSIETG---LYGLALQLLKKNKKLLAGA--------THAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSS 252 (587)
Q Consensus 184 l~~a~~~~---~~~~v~~Ll~~~~~~~~~~--------~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (587)
||.|+..+ +.+++++|++. +..++. .|..|.||||+|+..++
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~--g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~------------------------- 291 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEK--GAKVDYDGAARKDSEKYKGRTALHYAAQVSN------------------------- 291 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHH--TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC-------------------------
T ss_pred HHHHHHhCCcchHHHHHHHHHC--CCCcccccccccCcccccCCCHHHHHHHhCC-------------------------
Confidence 99999998 89999999998 665554 67789999999999998
Q ss_pred hHHHHHHHHHHHHh-hccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHH
Q 007858 253 TQALELVKCLWKEI-SKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTF 331 (587)
Q Consensus 253 ~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv 331 (587)
.+++++|++++ .+++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.+++
T Consensus 292 ---~~~v~~Ll~~~~~~~n~~d-----~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 292 ---MPIVKYLVGEKGSNKDKQD-----EDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp ---HHHHHHHHHHSCCCTTCCC-----TTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred ---HHHHHHHHHhcCCCccCcC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999987 7777654 4889999999999999999999999999 799999999999999999999999
Q ss_pred HHHHhcCcch
Q 007858 332 KLIYEMGFDK 341 (587)
Q Consensus 332 ~~Ll~~g~~~ 341 (587)
++|++++++.
T Consensus 363 ~~Ll~~~a~~ 372 (373)
T 2fo1_E 363 DIFDRCRPER 372 (373)
T ss_dssp HHHHTTC---
T ss_pred HHHHhcCccc
Confidence 9999998763
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=322.55 Aligned_cols=244 Identities=17% Similarity=0.129 Sum_probs=197.9
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccC---------CCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCC
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTG---------HDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG 145 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~---------~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~ 145 (587)
...|.|+||+|+..|+.+.+..++..+. ... ++.+|..|+||||+|+..|+.+++++|++.|+++ +.+|
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~ 89 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNP-LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIIT 89 (285)
T ss_dssp ------------------------------CCSEECCCCT-TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEEC
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCc-ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcC
Confidence 4679999999999999877777665430 123 6778999999999999999999999999999996 8999
Q ss_pred CCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhh
Q 007858 146 GGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLAR 224 (587)
Q Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~ 224 (587)
.+|.||||+|+..|+.+++++|++.++ .+..+.+|.||||.|+..|+.++++.|++. +...+. +.+|.||||+|+.
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~-~~~g~t~L~~A~~ 166 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH--GASVQP-ESDLASPIHEAAR 166 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSSC-SCTTSCHHHHHHH
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC--CCCCCC-CCCCCCHHHHHHH
Confidence 999999999999999999999999998 888999999999999999999999999998 655543 4559999999999
Q ss_pred CCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhC
Q 007858 225 NPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSY 304 (587)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~ 304 (587)
.++ .+++++|++.+.+++..+ ..|.||||+|+..|+.+++++|++++
T Consensus 167 ~g~----------------------------~~~v~~Ll~~g~~~~~~d-----~~g~t~L~~A~~~~~~~~v~~Ll~~g 213 (285)
T 3d9h_A 167 RGH----------------------------VECVNSLIAYGGNIDHKI-----SHLGTPLYLACENQQRACVKKLLESG 213 (285)
T ss_dssp HTC----------------------------HHHHHHHHHTTCCTTCCB-----TTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCC----------------------------HHHHHHHHHCCCCCCCcC-----CCCCCHHHHHHHcCcHHHHHHHHHCC
Confidence 997 999999999999887655 47899999999999999999999999
Q ss_pred CCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHc
Q 007858 305 PDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQY 362 (587)
Q Consensus 305 ~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~ 362 (587)
++ ++ .|..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+..
T Consensus 214 a~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~----~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 214 AD-VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQ----AKNAEGKRPVELVPPE 265 (285)
T ss_dssp CC-TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCGGGGSCTT
T ss_pred CC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CcCCCCCCHHHHhcCc
Confidence 99 46 48999999999999999999999999999976 7999999999999943
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=319.38 Aligned_cols=251 Identities=17% Similarity=0.138 Sum_probs=173.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|.+|.||||+|+..|+.++|++|++.+...+.++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~ 84 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHL 84 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHH
Confidence 677777777777777777777777776222235667777777777777777777777777777774 6777777777777
Q ss_pred HHHhCChHHHHHHhhcCC-CC-------------CCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHH
Q 007858 155 AALFGQSKMASFLYRQNE-DN-------------LEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMH 220 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~-------------~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh 220 (587)
|+..|+.+++++|+++++ .. .....+.++++.+...+.......++.. .+...+.+|..|.||||
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 85 ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED-WRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC-GGGGTTCCCTTSCCHHH
T ss_pred HHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhh-hhhcCCCcCCCCcCHHH
Confidence 777777777777777665 11 1223345566666555544444444443 46778889999999999
Q ss_pred HHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHH
Q 007858 221 MLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVL 300 (587)
Q Consensus 221 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~L 300 (587)
+|+..++ .+++++|+++|++++..+. ..|.||||+|+..|+.+++++|
T Consensus 164 ~A~~~g~----------------------------~~~v~~Ll~~g~~~~~~~~----~~g~tpL~~A~~~~~~~~v~~L 211 (282)
T 1oy3_D 164 VAVIHKD----------------------------AEMVRLLRDAGADLNKPEP----TCGRTPLHLAVEAQAASVLELL 211 (282)
T ss_dssp HHHHTTC----------------------------HHHHHHHHHHTCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCC----------------------------HHHHHHHHHcCCCCCCCCC----CCCcCHHHHHHHcCCHHHHHHH
Confidence 9999998 9999999999998886543 2489999999999999999999
Q ss_pred HHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCC
Q 007858 301 TRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSN 364 (587)
Q Consensus 301 l~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~ 364 (587)
+++|++ ++.+|..|+||||+|+.+|+.+++++|+++|++++ .+|.+|.|||++|....+
T Consensus 212 l~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 212 LKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP----EDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC----CCC---------------
T ss_pred HHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC----cCCCcccccccccCCccc
Confidence 999999 79999999999999999999999999999999976 799999999999988754
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=339.45 Aligned_cols=255 Identities=13% Similarity=0.031 Sum_probs=202.4
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|.+|.||||+|+..|+.++|++|++.| ++ ++.+|..|.||||+|+..|+.++|++|+++|++. .+.+|.||||+
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~ 90 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETG--VS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHL 90 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHH
Confidence 666777888888888888888888777 67 7777777788888888888888888888777753 23467778888
Q ss_pred HHHhCChHHHHHHhhc----CC-CCC-----------------CCCCCchHHHHHHHhC--cHHHHHHHHHhcccccccc
Q 007858 155 AALFGQSKMASFLYRQ----NE-DNL-----------------EPDDLENTFFVSIETG--LYGLALQLLKKNKKLLAGA 210 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~----~~-~~~-----------------~~~~g~t~l~~a~~~~--~~~~v~~Ll~~~~~~~~~~ 210 (587)
|+..|+.+++++|++. +. .+. .+.+|.||||.|+..| +.+++++|++. +..++.
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~--ga~~~~ 168 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL--GASPTA 168 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH--TCCTTC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc--CCCCcc
Confidence 8888888888877777 43 222 5667888888888888 88888888887 778888
Q ss_pred cccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHH
Q 007858 211 THAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAH 290 (587)
Q Consensus 211 ~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~ 290 (587)
+|..|.||||+|+..++ .+++++|++.+++....+.+..+..|.||||+|+.
T Consensus 169 ~d~~g~t~L~~A~~~g~----------------------------~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 169 KDKADETPLMRAMEFRN----------------------------REALDLMMDTVPSKSSLRLDYANKQGNSHLHWAIL 220 (364)
T ss_dssp CCTTSCCHHHHHHHTTC----------------------------HHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCC----------------------------HHHHHHHHhcccccccccccccCCCCCcHHHHHHH
Confidence 88899999999998887 89999999988873332233334588999999999
Q ss_pred cCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhh--------hhhccCCCCcHHHHHHHc
Q 007858 291 SGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI--------ATYVDVSGNNLLHLAAQY 362 (587)
Q Consensus 291 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~--------~~~~d~~G~TpLhlA~~~ 362 (587)
.|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|++.+.. ....+..|+|||+.|+..
T Consensus 221 ~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~ 299 (364)
T 3ljn_A 221 INWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAAD 299 (364)
T ss_dssp TTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCC
T ss_pred cCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhc
Confidence 9999999999999999 7999999999999999999999999999999887531 011577888899888887
Q ss_pred CCCC
Q 007858 363 SNPK 366 (587)
Q Consensus 363 ~~~~ 366 (587)
++.+
T Consensus 300 ~~~~ 303 (364)
T 3ljn_A 300 PSKQ 303 (364)
T ss_dssp HHHH
T ss_pred cCHH
Confidence 7543
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=319.89 Aligned_cols=270 Identities=16% Similarity=0.176 Sum_probs=237.6
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|.||||+|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++++ ++ ++.+|..|.|
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g--~~-~~~~~~~g~t 126 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLL--QHGADVHAK-DKGGLVPLHNACSYGHYEVTELLLKHG--AC-VNAMDLWQFT 126 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHH--HcCCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHCC--CC-CCCCCCCCCC
Confidence 45678999999999999999999999 678899887 899999999999999999999999999 88 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
|||+|+..|+.+++++|+++|++. +..+..|.||+++|+..+..+.+++.... .++..++..+..+.+
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 194 (351)
T 3utm_A 127 PLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPELRERLTYEFKG-----------HSLLQAAREADLAKV 194 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHH-----------HHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhhHHHHHhhhcc-----------cHHHHHHHhccHHHH
Confidence 999999999999999999999995 89999999999999988888888776643 356777888888888
Q ss_pred HHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhh
Q 007858 197 LQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLK 276 (587)
Q Consensus 197 ~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 276 (587)
..++.. .......+..|.||||+|+..++ ....+++++|++.|.+++..+.
T Consensus 195 ~~~l~~--~~~~~~~~~~~~t~L~~A~~~~~-------------------------~~~~~~~~~Ll~~g~~~~~~~~-- 245 (351)
T 3utm_A 195 KKTLAL--EIINFKQPQSHETALHCAVASLH-------------------------PKRKQVAELLLRKGANVNEKNK-- 245 (351)
T ss_dssp HHHTTT--CCTTCCCTTTCCCHHHHHHHCCS-------------------------TTHHHHHHHHHHTTCCTTCCCT--
T ss_pred HHHHHh--hcccccCCCCCCCHHHHHHHHhC-------------------------ccHHHHHHHHHHcCCCcCCcCC--
Confidence 888876 44555677889999999998853 1127899999999988876553
Q ss_pred hccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHH
Q 007858 277 LISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLL 356 (587)
Q Consensus 277 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 356 (587)
.|.||||.|+..|+.+++++|++++++ ++.+|..|+||||+|+.+|+.+++++|+++|++++ .+|..|+||+
T Consensus 246 ---~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~----~~~~~g~tal 317 (351)
T 3utm_A 246 ---DFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS----IISLQGFTAA 317 (351)
T ss_dssp ---TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHH
T ss_pred ---CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----CcCCCCCChh
Confidence 789999999999999999999999999 68899999999999999999999999999999876 6999999999
Q ss_pred HHHHH
Q 007858 357 HLAAQ 361 (587)
Q Consensus 357 hlA~~ 361 (587)
|+|..
T Consensus 318 ~~a~~ 322 (351)
T 3utm_A 318 QMGNE 322 (351)
T ss_dssp HHSCH
T ss_pred hhhhH
Confidence 99854
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=309.73 Aligned_cols=225 Identities=19% Similarity=0.189 Sum_probs=130.8
Q ss_pred CCCCCcHHHHHHhcC-------------CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCccc
Q 007858 75 TKGYQTILHVATGAK-------------QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLL 141 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g-------------~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~ 141 (587)
|.+|.||||+|+..| +.+++++|++.+ +++.+..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~- 83 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA- 83 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHcc--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 555666666666554 566666666666 5522344666666666666666666666666666664
Q ss_pred ccCCCCCCcHHHHHHHhCChHHHHHHhhcCC--CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHH
Q 007858 142 TIRGGGQMTPLYIAALFGQSKMASFLYRQNE--DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAM 219 (587)
Q Consensus 142 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~L 219 (587)
+.+|..|.||||+|+..|+.+++++|++.++ .+..+.+|.||||.|+..++.++++.|++. +..++.+|..|.|||
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSAL 161 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT--TCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc--CCCCCCcCCCCCCHH
Confidence 6666666666666666666666666666654 444555556666666666666666666654 555666667777777
Q ss_pred HHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHH
Q 007858 220 HMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAV 299 (587)
Q Consensus 220 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~ 299 (587)
|+|+..++ .+++++|++.|++++..+ ..|.||||+|+..|+.+++++
T Consensus 162 ~~A~~~~~----------------------------~~~v~~Ll~~ga~~~~~~-----~~g~tpL~~A~~~~~~~~v~~ 208 (253)
T 1yyh_A 162 HWAAAVNN----------------------------VDAAVVLLKNGANKDMQN-----NREETPLFLAAREGSYETAKV 208 (253)
T ss_dssp HHHHHHTC----------------------------HHHHHHHHHTTCCTTCCC-----TTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCC----------------------------HHHHHHHHHcCCCCCCcC-----CCCCCHHHHHHHCCCHHHHHH
Confidence 77776665 677777777766665543 366778888888888888888
Q ss_pred HHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcC
Q 007858 300 LTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMG 338 (587)
Q Consensus 300 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 338 (587)
|+++|++ ++.+|..|+||||+|+.+|+.+++++|.+..
T Consensus 209 Ll~~ga~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 209 LLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHcCCC-ccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 8888888 5778888888888888888888888887654
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=330.42 Aligned_cols=261 Identities=11% Similarity=0.030 Sum_probs=234.8
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|.||||.|+..|+.++|++|+ +.+.+++.. |..|.||||+|+..|+.++|++|++.+ ++ ..+.+|.|
T Consensus 15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll--~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~---~~~~~g~t 86 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQTDEVRRLI--ETGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVG--EV---HSLWHGQK 86 (364)
T ss_dssp -CCHHHHHHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHC--CC---CCCBTTBC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH--HcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCC--CC---ccccCCCC
Confidence 45778999999999999999999999 678889887 999999999999999999999999999 44 33458999
Q ss_pred HHHHHHHcCCHHHHHHHHhc----CCccccc-----------------CCCCCCcHHHHHHHhC--ChHHHHHHhhcCC-
Q 007858 117 AFCFAAAVGSVEIAQFMLQR----NPNLLTI-----------------RGGGQMTPLYIAALFG--QSKMASFLYRQNE- 172 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~----~~~l~~~-----------------~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~- 172 (587)
|||+|+..|+.+++++|++. +.+. +. .|..|.||||+|+..| +.+++++|++.++
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~ 165 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 99999999999999999999 7764 54 8889999999999999 9999999999998
Q ss_pred CCCCCCCCchHHHHHHHhCcHHHHHHHHHhccccc-----ccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhc
Q 007858 173 DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLL-----AGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITN 247 (587)
Q Consensus 173 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~-----~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
++..+.+|.||||.|+..|+.+++++|++. +.. ++.+|..|.||||+|+..++
T Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~g~t~L~~A~~~g~-------------------- 223 (364)
T 3ljn_A 166 PTAKDKADETPLMRAMEFRNREALDLMMDT--VPSKSSLRLDYANKQGNSHLHWAILINW-------------------- 223 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--CSCSSSCCTTCCCTTCCCTTHHHHTTTC--------------------
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHhc--ccccccccccccCCCCCcHHHHHHHcCC--------------------
Confidence 888999999999999999999999999998 665 88899999999999999998
Q ss_pred cCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCc-----------cccccCCCC
Q 007858 248 NTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDL-----------VHQLDENGR 316 (587)
Q Consensus 248 ~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~-----------~~~~d~~g~ 316 (587)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++++++. ....+..|+
T Consensus 224 --------~~~v~~Ll~~gad~~~~d-----~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (364)
T 3ljn_A 224 --------EDVAMRFVEMGIDVNMED-----NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVW 290 (364)
T ss_dssp --------HHHHHHHHTTTCCTTCCC-----TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCC
T ss_pred --------HHHHHHHHHcCCCCCCCC-----CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccccccccc
Confidence 999999999999987665 48899999999999999999999997652 122577899
Q ss_pred chHHHHHHcCChhHHHHHHhcCcch
Q 007858 317 SIFHIAVMHRHADTFKLIYEMGFDK 341 (587)
Q Consensus 317 t~Lh~A~~~~~~~iv~~Ll~~g~~~ 341 (587)
||++.|+..++.+.+..|++.+.+.
T Consensus 291 ~~l~~aa~~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 291 LDFVPAAADPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp CTTSCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhccCHHHHHHHHHHHHHH
Confidence 9999999999888888888877665
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=312.17 Aligned_cols=226 Identities=14% Similarity=0.133 Sum_probs=177.5
Q ss_pred cccCCCCCCcHHHHHHHcC-------------CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-
Q 007858 107 LSLQDENGNTAFCFAAAVG-------------SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE- 172 (587)
Q Consensus 107 l~~~d~~g~TpLh~Aa~~g-------------~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~- 172 (587)
++.+|.+|.||||+|+..| +.+++++|++.|+++....|..|.||||+|+..|+.+++++|+++++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7889999999999999987 89999999999999867779999999999999999999999999998
Q ss_pred CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCc
Q 007858 173 DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSS 252 (587)
Q Consensus 173 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (587)
.+..+..|.||||.|+..++.++++.|++. .+...+.++..|.||||+|+..++
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~------------------------- 136 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRN-RATDLDARMHDGTTPLILAARLAV------------------------- 136 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHS-TTSCTTCCCTTCCCHHHHHHHHTC-------------------------
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCcHHHHHHHcCh-------------------------
Confidence 888999999999999999999999999998 555888899999999999999987
Q ss_pred hHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHH
Q 007858 253 TQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK 332 (587)
Q Consensus 253 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 332 (587)
.+++++|++.|.+++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.++++
T Consensus 137 ---~~~v~~Ll~~g~~~~~~d-----~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 137 ---EGMLEDLINSHADVNAVD-----DLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp ---SSHHHHHHHTTCCTTCBC-----TTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred ---HHHHHHHHHcCCCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 899999999999887665 3789999999999999999999999999 7999999999999999999999999
Q ss_pred HHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 333 LIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 333 ~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+|+++|++++ .+|..|+||||+|++.|+.+++++|
T Consensus 208 ~Ll~~ga~~~----~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 208 VLLDHFANRD----ITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp HHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCCcc----ccccCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999976 6999999999999999997766554
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=299.08 Aligned_cols=223 Identities=15% Similarity=0.090 Sum_probs=119.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHH----ccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCc
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVE----LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMT 150 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~----~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~t 150 (587)
|.+|.||||+|+..|+.+++++|++ .+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 81 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGG--RE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQT 81 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT--CC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcC--CC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCC
Confidence 6677777777777777777777776 33 55 6677777777777777777777777777777774 666777777
Q ss_pred HHHHHHHhCChHHHHHHhhcCC-----CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccc-cCCchHHHHHhh
Q 007858 151 PLYIAALFGQSKMASFLYRQNE-----DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATH-AKYGTAMHMLAR 224 (587)
Q Consensus 151 pL~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d-~~g~t~Lh~a~~ 224 (587)
|||+|+..|+.+++++|++.++ .+..+..|.||||.|+..++.++++.|++. +...+..+ ..|.||||+|+.
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER--GADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc--CCCcccccccCCCcHHHHHHH
Confidence 7777777777777777777664 122333344444444444444444444443 33333333 334444444444
Q ss_pred CCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhC
Q 007858 225 NPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSY 304 (587)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~ 304 (587)
.++ .+++++|+++|.+++..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 160 ~~~----------------------------~~~v~~Ll~~g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 160 NNS----------------------------LSMVQLLLQHGANVNAQM-----YSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp TTC----------------------------HHHHHHHHHTTCCTTCBC-----TTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCC----------------------------HHHHHHHHHcCCCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 443 344444444443333222 13344444444444444444444444
Q ss_pred CCccccccCCCCchHHHHHHcCChhHHHHHHhc
Q 007858 305 PDLVHQLDENGRSIFHIAVMHRHADTFKLIYEM 337 (587)
Q Consensus 305 ~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 337 (587)
++ ++.+|..|+||||+|+..|+.++++.|.++
T Consensus 207 a~-~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 207 AD-SSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp CC-TTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred CC-CCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 44 344444444444444444444444444433
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=311.10 Aligned_cols=253 Identities=16% Similarity=0.120 Sum_probs=187.8
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcc--cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCch
Q 007858 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNL--LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLEN 182 (587)
Q Consensus 106 ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t 182 (587)
+++.+|..|.||||+|++.|+.++|++|++.|++. .+.+|..|.||||+|+..|+.+++++|+++++ .+..+..|.|
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 46789999999999999999999999999998872 38899999999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCcHHHHHHHHHhccccccc-------------ccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccC
Q 007858 183 TFFVSIETGLYGLALQLLKKNKKLLAG-------------ATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNT 249 (587)
Q Consensus 183 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~-------------~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
|||+|+..++.++++.|++. +.... .....+.++++.++..+..
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 137 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQP--RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE--------------------- 137 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSS--CCSSCCCC--------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhcc--CCCCchhhHHHHhhcccccCcchhcchhhhccccccc---------------------
Confidence 99999999999999999987 32211 1222344555554443320
Q ss_pred CCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccC-CCCchHHHHHHcCCh
Q 007858 250 DSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDE-NGRSIFHIAVMHRHA 328 (587)
Q Consensus 250 ~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~ 328 (587)
......+...+.+++.. +..|.||||.|+..|+.+++++|++++++ ++..+. .|+||||+|+.+|+.
T Consensus 138 ------~~~~~~~~~~~~~~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~ 205 (282)
T 1oy3_D 138 ------NEEEPRDEDWRLQLEAE-----NYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAA 205 (282)
T ss_dssp ------------CCCGGGGTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCH
T ss_pred ------hhhhhhhhhhhhcCCCc-----CCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCH
Confidence 22223333334444433 45889999999999999999999999999 677775 599999999999999
Q ss_pred hHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCch
Q 007858 329 DTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPW 408 (587)
Q Consensus 329 ~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l 408 (587)
+++++|+++|++++ .+|..|+||||+|+..++.++++.| +.+|++++.+|.+|+||+
T Consensus 206 ~~v~~Ll~~gad~~----~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl 262 (282)
T 1oy3_D 206 SVLELLLKAGADPT----ARMYGGRTPLGSALLRPNPILARLL-------------------RAHGAPEPEDGGDKLSPC 262 (282)
T ss_dssp HHHHHHHHTTCCTT----CCCTTSCCHHHHHHTSSCHHHHHHH-------------------HHTTCCCCCCC-------
T ss_pred HHHHHHHHcCCCCc----ccccCCCCHHHHHHHcCCcHHHHHH-------------------HHcCCCcCcCCCcccccc
Confidence 99999999999976 7999999999999999997766655 568999999999999999
Q ss_pred hhhHHhhh
Q 007858 409 ELFTDEHK 416 (587)
Q Consensus 409 ~~a~~~~~ 416 (587)
++|.+...
T Consensus 263 ~~a~~~~~ 270 (282)
T 1oy3_D 263 SSSGSDSD 270 (282)
T ss_dssp --------
T ss_pred cccCCccc
Confidence 99976543
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=294.90 Aligned_cols=220 Identities=20% Similarity=0.229 Sum_probs=174.1
Q ss_pred hhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCC
Q 007858 70 LRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQM 149 (587)
Q Consensus 70 ~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~ 149 (587)
++.. |.+|.||||+|+..|+.+++++|++.| .+ ++..|..|.||||+|+..|+.+++++|+++|+++ +.++..|.
T Consensus 4 ~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 78 (237)
T 3b7b_A 4 FKME-HQNKRSPLHAAAEAGHVDICHMLVQAG--AN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGS 78 (237)
T ss_dssp CCCS-SCCSCCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSC
T ss_pred cccc-cCCCCCHHHHHHHcCcHHHHHHHHHcC--CC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCC
Confidence 3344 777888888888888888888888887 77 7778888888888888888888888888888875 77788888
Q ss_pred cHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCc
Q 007858 150 TPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAF 229 (587)
Q Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~ 229 (587)
||||+|+..|+.+++++|++.++ ...+..+..|.||||+|+..++
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~---------------------------------~~~~~~~~~g~t~L~~A~~~~~-- 123 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQ---------------------------------MDVNCQDDGGWTPMIWATEYKH-- 123 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTC---------------------------------CCTTCCCTTSCCHHHHHHHTTC--
T ss_pred cHHHHHHHcCCHHHHHHHHhCCC---------------------------------CCcccCCCCCCCHHHHHHHcCC--
Confidence 88888888888888888887763 3334455556666666666655
Q ss_pred ccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccc
Q 007858 230 TSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVH 309 (587)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~ 309 (587)
.+++++|++.|.+++..+ ..|.||||.|+..|+.+++++|++++++ ++
T Consensus 124 --------------------------~~~~~~Ll~~g~~~~~~~-----~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~ 171 (237)
T 3b7b_A 124 --------------------------VDLVKLLLSKGSDINIRD-----NEENICLHWAAFSGCVDIAEILLAAKCD-LH 171 (237)
T ss_dssp --------------------------HHHHHHHHHTTCCTTCCC-----TTSCCHHHHHHHHCCHHHHHHHHTTTCC-TT
T ss_pred --------------------------HHHHHHHHHCCCCCCccC-----CCCCCHHHHHHHCCCHHHHHHHHHcCCC-CC
Confidence 666666666666555433 3678888888888999999999999999 68
Q ss_pred cccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCC
Q 007858 310 QLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNP 365 (587)
Q Consensus 310 ~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~ 365 (587)
..|..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+..++.
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~----~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT----LKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCTTSCCHHHHSCTTCHH
T ss_pred CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC----ccCCCCCCHHHHHHHHHHH
Confidence 899999999999999999999999999999876 6899999999999988863
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=294.46 Aligned_cols=225 Identities=16% Similarity=0.212 Sum_probs=185.6
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|.||||.|+..|+.+++++|+ +.+.+++.. +..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.|
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t 79 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLV--QAGANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKAG--AL-VDPKDAEGST 79 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTT--CC-CCCCCTTSCC
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHH--HcCCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhCC--CC-CCCCCCCCCc
Confidence 45788999999999999999999999 678888877 899999999999999999999999998 88 8999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
|||+|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|++.++ .+..+.+|.||||.|+..|+.++
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 99999999999999999999943358899999999999999999999999999887 55555555555555555555555
Q ss_pred HHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhh
Q 007858 196 ALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL 275 (587)
Q Consensus 196 v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 275 (587)
++.|++ .|.+++..+
T Consensus 160 ~~~Ll~---------------------------------------------------------------~g~~~~~~~-- 174 (237)
T 3b7b_A 160 AEILLA---------------------------------------------------------------AKCDLHAVN-- 174 (237)
T ss_dssp HHHHHT---------------------------------------------------------------TTCCTTCCC--
T ss_pred HHHHHH---------------------------------------------------------------cCCCCCCcC--
Confidence 555555 444433322
Q ss_pred hhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHh
Q 007858 276 KLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336 (587)
Q Consensus 276 ~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 336 (587)
..|.||||+|++.|+.+++++|+++|++ ++.+|.+|+||||+|+.+++.+.+..+++
T Consensus 175 ---~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 175 ---IHGDSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp ---TTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHhCCHhHHHHHHHcCCC-CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2557777777777788888888888888 68888889999999998888766555554
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=299.29 Aligned_cols=226 Identities=16% Similarity=0.138 Sum_probs=204.0
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHh----cCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCC
Q 007858 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQ----RNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDL 180 (587)
Q Consensus 106 ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~----~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g 180 (587)
+++.+|.+|+||||+|++.|+.+++++|++ .+.++ +.+|..|.||||+|+..|+.+++++|++.++ .+..+.+|
T Consensus 1 l~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 79 (241)
T 1k1a_A 1 MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHG 79 (241)
T ss_dssp ------CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 357789999999999999999999999997 67775 8899999999999999999999999999998 88889999
Q ss_pred chHHHHHHHhCcHHHHHHHHHhcccc----cccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHH
Q 007858 181 ENTFFVSIETGLYGLALQLLKKNKKL----LAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQAL 256 (587)
Q Consensus 181 ~t~l~~a~~~~~~~~v~~Ll~~~~~~----~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
.||||.|+..++.++++.|++. +. ..+..|..|.||||+|+..++ .
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~----------------------------~ 129 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDS--AAPGTLDLEARNYDGLTALHVAVNTEC----------------------------Q 129 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH--SCTTSCCTTCCCTTSCCHHHHHHHHTC----------------------------H
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCccccccccCcCCCcHHHHHHHcCC----------------------------H
Confidence 9999999999999999999998 43 677889999999999999997 9
Q ss_pred HHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHh
Q 007858 257 ELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336 (587)
Q Consensus 257 ~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 336 (587)
+++++|++.|.+++..+. ..|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..|+.+++++|++
T Consensus 130 ~~~~~Ll~~g~~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 130 ETVQLLLERGADIDAVDI----KSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp HHHHHHHHTTCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccccc----cCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999998876542 3689999999999999999999999999 79999999999999999999999999999
Q ss_pred cCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 337 MGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 337 ~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+|++++ .+|..|+||||+|+..++.++++.|
T Consensus 205 ~ga~~~----~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 205 SGADSS----LKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp TTCCTT----CCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred cCCCCC----CcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 999976 6999999999999999988777666
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=293.82 Aligned_cols=226 Identities=19% Similarity=0.174 Sum_probs=171.8
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
..+.+|||.|+..|+.+.++.++ +..+..++.. +.+|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||||
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~ 78 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERI-LADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLG--VP-VNDKDDAGWSPLH 78 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHH-HHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CC-SCCCCTTSCCHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHH-HhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHhC--CC-CCCcCCCCCCHHH
Confidence 45778888888888888888888 5555555555 788888888888888888888888887 77 7788888888888
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQ 198 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~ 198 (587)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.+. .+..+.
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------------------- 137 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-------------------- 137 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------------------
T ss_pred HHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------------
Confidence 888888888888888888885 7788888888888888888888888887776 444444
Q ss_pred HHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhc
Q 007858 199 LLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLI 278 (587)
Q Consensus 199 Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 278 (587)
.|.||||+|+..++ .+++++|++.+.+++..+
T Consensus 138 ---------------~g~t~L~~A~~~~~----------------------------~~~v~~Ll~~g~~~~~~~----- 169 (231)
T 3aji_A 138 ---------------YDATAMHRAAAKGN----------------------------LKMVHILLFYKASTNIQD----- 169 (231)
T ss_dssp ---------------TSCCHHHHHHHHTC----------------------------HHHHHHHHHTTCCSCCCC-----
T ss_pred ---------------CCCcHHHHHHHcCC----------------------------HHHHHHHHhcCCCccccC-----
Confidence 44455555544443 455555555554444332
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 279 SKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 279 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|.++|++
T Consensus 170 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 170 TEGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 2567777777777888888888888888 688888899999999888888999988887764
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=290.12 Aligned_cols=205 Identities=16% Similarity=0.123 Sum_probs=177.7
Q ss_pred cccceeecCCCCCCCCCCcCCC----CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcC
Q 007858 14 QEISISITGRDPANSVQPLQND----KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAK 89 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g 89 (587)
..+..++...+.+....+++.+ ...+..|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL--QLGVPVNDK-DDAGWSPLHIAASAG 84 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH--HTTCCSCCC-CTTSCCHHHHHHHHT
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH--HhCCCCCCc-CCCCCCHHHHHHHcC
Confidence 3455555555555444444332 345789999999999999999999999 668888877 899999999999999
Q ss_pred CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhh
Q 007858 90 QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169 (587)
Q Consensus 90 ~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (587)
+.+++++|++++ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 85 ~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 160 (231)
T 3aji_A 85 XDEIVKALLVKG--AH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLF 160 (231)
T ss_dssp CHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 999999999998 88 8999999999999999999999999999999995 8899999999999999999999999999
Q ss_pred cCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 170 QNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 170 ~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.++ .+..+.+|.||||.|+..++.+++++|+++ +..++.+|..|.||||+|+..++
T Consensus 161 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 161 YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ--GASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHSCHHHH
T ss_pred cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHhhHH
Confidence 998 777888888999988888888888888887 77778888888888888877664
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=308.75 Aligned_cols=262 Identities=18% Similarity=0.188 Sum_probs=219.5
Q ss_pred HHHHcCCHHHHHHHHhhcCccchh--------hhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 48 KAALKGDCNEAKRILGDDHQSMLR--------AAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 48 ~Aa~~g~~~~v~~Ll~~~~~~~~~--------~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
.++..|+.+.++.++ ... ..+. ...+..|.||||.||..|+.++|++|++.| ++ ++.+|..|.||||
T Consensus 4 ~~a~~~~~~~l~~~~-~~~-~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~ 78 (299)
T 1s70_B 4 ADAKQKRNEQLKRWI-GSE-TDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERG--AD-INYANVDGLTALH 78 (299)
T ss_dssp HHHHHHHHHHHHHHH-HTT-TSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHC--CC-TTCBCTTCCBHHH
T ss_pred hHHHHHHHHHHHHHH-ccc-cccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcC--CC-CcccCCCCCCHHH
Confidence 467888888888888 322 1111 112446789999999999999999999999 88 9999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQ 198 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~ 198 (587)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||||.|+..++.++++.
T Consensus 79 ~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 157 (299)
T 1s70_B 79 QACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN 157 (299)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHH
Confidence 999999999999999999996 8999999999999999999999999999998 88899999999999999999999999
Q ss_pred HHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhc
Q 007858 199 LLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLI 278 (587)
Q Consensus 199 Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 278 (587)
++.. .+...+..+..+.++++ ..+..++..+..... ..+
T Consensus 158 ll~~-~~~~~~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~~~----~~~ 196 (299)
T 1s70_B 158 EVNR-QGVDIEAARKEEERIML------------------------------------RDARQWLNSGHINDV----RHA 196 (299)
T ss_dssp HHHH-HTCCHHHHHHHHHHHHH------------------------------------HHHHHHHHHTCCCCC----CCT
T ss_pred HHhh-cCCCchhhhhhhhhHHH------------------------------------HHHHHHHhccCcchh----hhc
Confidence 9987 45544443333333322 233344444433222 123
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHH
Q 007858 279 SKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHL 358 (587)
Q Consensus 279 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhl 358 (587)
..|.||||.|+..|+.+++++|++++++ ++.+|..|+||||+|+.+|+.+++++|+++|++++ .+|..|+||||+
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~----~~d~~g~t~l~~ 271 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME----AVNKVGQTAFDV 271 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCTTTS
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHH
Confidence 4789999999999999999999999999 79999999999999999999999999999999976 699999999999
Q ss_pred HHH
Q 007858 359 AAQ 361 (587)
Q Consensus 359 A~~ 361 (587)
|+.
T Consensus 272 A~~ 274 (299)
T 1s70_B 272 ADE 274 (299)
T ss_dssp CCS
T ss_pred HHH
Confidence 964
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=303.45 Aligned_cols=229 Identities=16% Similarity=0.189 Sum_probs=139.9
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccc--------hhhhcCCCCCcHHHHHHhcCCH-HHHHHHHHccCCCCc
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSM--------LRAAVTKGYQTILHVATGAKQT-NFVKQMVELTGHDNL 106 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~--------~~~~~~~~g~t~Lh~A~~~g~~-~iv~~Ll~~~~~~~l 106 (587)
.+.++.+.++|+.||..|+.++|+.|+ +.+.+ ++.. +..|.||||.|+..++. ++++.|++.| ++
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL--~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--ad- 78 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLL--EWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPASG--LG- 78 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHH--TCC-----------------------------------------CC--CC-
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHH--HCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHCC--CC-
Confidence 345667778888888888888888888 33322 2233 56677777777776654 3677777777 77
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHH
Q 007858 107 LSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFV 186 (587)
Q Consensus 107 l~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~ 186 (587)
++.+|.+|+||||+|+..|+.++|++|++.++++ +.++.+|.||+|.|+..++.+++++|++.++
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~-------------- 143 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNA-------------- 143 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC--------------
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCC--------------
Confidence 7777777777777777777777777777777774 7777777777777777777777777776665
Q ss_pred HHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 187 SIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 187 a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
.++.+|..|.||||+|+..|+ .+++++|++.|
T Consensus 144 --------------------~~n~~d~~g~TpL~~A~~~g~----------------------------~~~v~~Ll~~g 175 (269)
T 4b93_B 144 --------------------KPNKKDLSGNTPLIYACSGGH----------------------------HELVALLLQHG 175 (269)
T ss_dssp --------------------CSCCCCTTCCCHHHHHHHTTC----------------------------GGGHHHHHHTT
T ss_pred --------------------CCCCCCCCCCCHHHHHHHCCC----------------------------HHHHHHHHHCC
Confidence 344556666666666666665 56666666666
Q ss_pred hccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCC-hhHHHHHHhcCc
Q 007858 267 SKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRH-ADTFKLIYEMGF 339 (587)
Q Consensus 267 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~-~~iv~~Ll~~g~ 339 (587)
++++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+++++ .++++.+.+.+.
T Consensus 176 advn~~~-----~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~ 243 (269)
T 4b93_B 176 ASINASN-----NKGNTALHEAVIEKHVFVVELLLLHGAS-VQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVA 243 (269)
T ss_dssp CCTTCBC-----TTSCBHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCSGGGSCTTCHHHHHTTC------
T ss_pred CCCCccc-----cCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhch
Confidence 6665443 3678888888888888999999999988 68899999999999987765 344444444443
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=285.80 Aligned_cols=231 Identities=15% Similarity=0.113 Sum_probs=170.7
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|..|.||||.|++.|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++....+..|.||||+
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAG--YD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcC--CC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 556666777777777777777777666 56 666666677777777777777777777776666544444556677777
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNC 233 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~ 233 (587)
|+..|+.+++++|++.++ .+..+..|.||||.|+..++.+++++|+++ +..++.++..|.||||+|+..++.
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~g~t~l~~a~~~~~~----- 155 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK--GQDVDMMDQNGMTPLMWAAYRTHS----- 155 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCS-----
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc--CCCccccCCCCCcHHHHHHHhCCh-----
Confidence 777777777777776666 555666666777777777777777777765 666677788888888888855531
Q ss_pred CCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccC
Q 007858 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDE 313 (587)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~ 313 (587)
.++++.|++.+.+++..+. ..|.||||.|+..|+.+++++|+++|++ ++..|.
T Consensus 156 ----------------------~~~~~~L~~~~~~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~ 208 (240)
T 3eu9_A 156 ----------------------VDPTRLLLTFNVSVNLGDK----YHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQNI 208 (240)
T ss_dssp ----------------------STTHHHHHHTTCCTTCCCT----TTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBCT
T ss_pred ----------------------HHHHHHHHhcCCCcchhhc----cCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCC
Confidence 5677888888877765442 2678999999999999999999999999 699999
Q ss_pred CCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 314 NGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 314 ~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
.|+||||+|+..|+.+++++|++++.+..
T Consensus 209 ~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 209 KGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99999999999999999999999988754
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=282.77 Aligned_cols=92 Identities=23% Similarity=0.309 Sum_probs=46.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CcccccCCCCCCcHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRN--PNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~~l~~~~~~~g~tpL~~A 155 (587)
|+||||.|+..|+.++|++|++.+ .+..+.+|..|.||||+|+..|+.+++++|+++| +++....|..|.||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK--PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC--GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC--ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 445555555555555555555554 3323334555555555555555555555555555 332112445555555555
Q ss_pred HHhCChHHHHHHhhcC
Q 007858 156 ALFGQSKMASFLYRQN 171 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~ 171 (587)
+..|+.+++++|++++
T Consensus 80 ~~~~~~~~~~~Ll~~g 95 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRP 95 (228)
T ss_dssp HHHCCHHHHHHHHSSS
T ss_pred HHcCCHHHHHHHHhCC
Confidence 5555555555555554
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-36 Score=294.34 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=206.9
Q ss_pred HHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHH
Q 007858 50 ALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEI 129 (587)
Q Consensus 50 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~i 129 (587)
+..++.+.+..++ .+. +++.+ |.+|.||||+|+..|+.++|++|++.| ++ ++.+ +|.||||+|+..|+.++
T Consensus 7 i~~~~~~~v~~lL-~~~--~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~--~g~t~L~~A~~~g~~~~ 77 (285)
T 3kea_A 7 INTWKSKQLKSFL-SSK--DTFKA-DVHGHSASYYAIADNNVRLVCTLLNAG--AL-KNLL--ENEFPLHQAATLEDTKI 77 (285)
T ss_dssp GGGCCHHHHHHHH-HST--TTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--GG-GSCC--TTCCHHHHHTTSSSCHH
T ss_pred HHhcCHHHHHHHH-HhC--CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CC-CCCC--CCCCHHHHHHHcCCHHH
Confidence 4456666677777 343 46666 899999999999999999999999998 77 6666 48999999999999999
Q ss_pred HHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCC-chHHHHHHHhCcHHHHHHHHHhccccc
Q 007858 130 AQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDL-ENTFFVSIETGLYGLALQLLKKNKKLL 207 (587)
Q Consensus 130 v~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g-~t~l~~a~~~~~~~~v~~Ll~~~~~~~ 207 (587)
+++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..| .||||.|+..|+.+++++|+++ +..
T Consensus 78 v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~--g~~ 154 (285)
T 3kea_A 78 VKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE--IPS 154 (285)
T ss_dssp HHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT--SCT
T ss_pred HHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC--CCc
Confidence 99999999995 8899999999999999999999999999998 88888888 7999999999999999999998 443
Q ss_pred cccccc-CCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChH-H
Q 007858 208 AGATHA-KYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKL-L 285 (587)
Q Consensus 208 ~~~~d~-~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~-L 285 (587)
. .+. .|.||||+|+..++ .+++++|+++|++++..+. .|.|| |
T Consensus 155 ~--~~~~~g~t~L~~A~~~g~----------------------------~~~v~~Ll~~gad~n~~~~-----~g~t~~L 199 (285)
T 3kea_A 155 T--FDLAILLSCIHITIKNGH----------------------------VDMMILLLDYMTSTNTNNS-----LLFIPDI 199 (285)
T ss_dssp T--CCCSTHHHHHHHHHHTTC----------------------------HHHHHHHHHHHHHTCTTCC-----CBCCTTH
T ss_pred c--ccccCCccHHHHHHHcCh----------------------------HHHHHHHHHcCCCCCcccC-----CCCChHH
Confidence 3 333 89999999999998 9999999999999887653 78897 9
Q ss_pred HHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 286 FDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 286 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
|+|+..|+.+++++|+++|++ ++..| +.|+..|+.+++++|+++|++++
T Consensus 200 ~~A~~~~~~~~v~~Ll~~gad-~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 200 KLAIDNKDIEMLQALFKYDIN-IYSAN-------LENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHTCHHHHHHHTTSCBC-STTTT-------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCCC-------hhhhhcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999 57776 35678999999999999998864
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=281.43 Aligned_cols=211 Identities=20% Similarity=0.199 Sum_probs=193.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC---CCC-CCCCCchHHHHHHH
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE---DNL-EPDDLENTFFVSIE 189 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~---~~~-~~~~g~t~l~~a~~ 189 (587)
|+||||+|++.|+.++++.|++.+++....+|..|.||||+|+..|+.+++++|++.++ .+. .+..|.||||.|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999999767799999999999999999999999999995 333 78899999999999
Q ss_pred hCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhcc
Q 007858 190 TGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKS 269 (587)
Q Consensus 190 ~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~ 269 (587)
.|+.++++.|++...+...+..|..|.||||+|+..++ .+++++|+++|.++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~----------------------------~~~~~~Ll~~g~~~ 133 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW----------------------------FEVSQFLIENGASV 133 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTC----------------------------HHHHHHHHHTTCCS
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCC----------------------------HhHHHHHHHcCCCc
Confidence 99999999999981127788899999999999999997 99999999999988
Q ss_pred chhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhC-CCccccccCCCCchHHHHHHcCChhHHHHHH-hcCcchhhhhhh
Q 007858 270 THKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSY-PDLVHQLDENGRSIFHIAVMHRHADTFKLIY-EMGFDKELIATY 347 (587)
Q Consensus 270 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~ 347 (587)
+..+. .|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..|+.+++++|+ +.|++++ .
T Consensus 134 ~~~~~-----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~----~ 203 (228)
T 2dzn_A 134 RIKDK-----FNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD----L 203 (228)
T ss_dssp CCCCT-----TSCCHHHHHHHTTCHHHHHHHHTTTCCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC----C
T ss_pred cccCC-----CCCCHHHHHHHcCCHHHHHHHHhcCccc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC----c
Confidence 76654 7899999999999999999999999 56 7999999999999999999999999999 8999976 6
Q ss_pred ccCCCCcHHHHHHHc
Q 007858 348 VDVSGNNLLHLAAQY 362 (587)
Q Consensus 348 ~d~~G~TpLhlA~~~ 362 (587)
+|.+|+||||+|+..
T Consensus 204 ~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 204 VDNKGAKAEDVALNE 218 (228)
T ss_dssp BCTTSCBGGGGCSST
T ss_pred cCCCCCcHHHHHHHH
Confidence 999999999999765
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=295.68 Aligned_cols=217 Identities=20% Similarity=0.297 Sum_probs=163.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCC-----CccccCCCCCCcHHHHHHHcCCH-HHHHHHHhcCCcccccCCCCC
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHD-----NLLSLQDENGNTAFCFAAAVGSV-EIAQFMLQRNPNLLTIRGGGQ 148 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~-----~ll~~~d~~g~TpLh~Aa~~g~~-~iv~~Ll~~~~~l~~~~~~~g 148 (587)
|.++.+||+.||+.|+.++|++|++.+... +.++..|..|.||||.|+..++. .+++.|++.|+++ +.+|.+|
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G 86 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDG 86 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCTTS
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCC
Confidence 667889999999999999999999987210 11456778889999999887765 4788899999995 8889999
Q ss_pred CcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCC
Q 007858 149 MTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA 228 (587)
Q Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~ 228 (587)
.||||+|+..|+.+++++|++.++ .++.++.+|.||+|.|+..++
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a----------------------------------~~~~~~~~g~t~l~~a~~~~~- 131 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGA----------------------------------NAGARNADQAVPLHLACQQGH- 131 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTC----------------------------------CTTCCCTTCCCHHHHHHHHTC-
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCC----------------------------------CcCccCCCCCCccccccccCh-
Confidence 999999999999999988888765 344567778888888888876
Q ss_pred cccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCcc
Q 007858 229 FTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLV 308 (587)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~ 308 (587)
.++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++ +
T Consensus 132 ---------------------------~~~~~~Ll~~g~~~n~~d-----~~g~TpL~~A~~~g~~~~v~~Ll~~gad-v 178 (269)
T 4b93_B 132 ---------------------------FQVVKCLLDSNAKPNKKD-----LSGNTPLIYACSGGHHELVALLLQHGAS-I 178 (269)
T ss_dssp ---------------------------HHHHHHHHHTTCCSCCCC-----TTCCCHHHHHHHTTCGGGHHHHHHTTCC-T
T ss_pred ---------------------------HHHHHHHHHCCCCCCCCC-----CCCCCHHHHHHHCCCHHHHHHHHHCCCC-C
Confidence 889999999998887665 4889999999999999999999999999 7
Q ss_pred ccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCC
Q 007858 309 HQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSN 364 (587)
Q Consensus 309 ~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~ 364 (587)
+..|..|+||||+|+.+|+.+++++|+++|++++ .+|.+|+||||+|+++++
T Consensus 179 n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~----~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 179 NASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ----VLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC----CCCTTSCCSGGGSCTTCH
T ss_pred CccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC----CcCCCCCCHHHHHHhCCc
Confidence 9999999999999999999999999999999976 799999999999988764
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=292.96 Aligned_cols=251 Identities=21% Similarity=0.209 Sum_probs=212.8
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCC
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGN 115 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~ 115 (587)
...+..+.||||.|+..|+.++++.|+ +.+.+++.. |.+|.||||+|+..|+.++|++|++.| ++ ++.+|..|.
T Consensus 34 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~-~~~~~~~g~ 107 (299)
T 1s70_B 34 TKVKFDDGAVFLAACSSGDTEEVLRLL--ERGADINYA-NVDGLTALHQACIDDNVDMVKFLVENG--AN-INQPDNEGW 107 (299)
T ss_dssp CCCEECHHHHHHHHHHHTCHHHHHHHH--HHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSC
T ss_pred cccccCCccHHHHHHHcCCHHHHHHHH--HcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCC
Confidence 455678899999999999999999999 667888877 899999999999999999999999998 88 999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCC--CCCCCchHHHHHHHhCcH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNL--EPDDLENTFFVSIETGLY 193 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~--~~~~g~t~l~~a~~~~~~ 193 (587)
||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..++.+++++++.....+. .+..+.++ ..
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~--------~~ 178 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERI--------ML 178 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH--------HH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhH--------HH
Confidence 9999999999999999999999996 8999999999999999999999999987654111 11111222 22
Q ss_pred HHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhh
Q 007858 194 GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 194 ~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
..+..++.. ........+..|.||||+|+..++ .+++++|++.|++++..+
T Consensus 179 ~~~~~~l~~-~~~~~~~~~~~g~t~L~~A~~~g~----------------------------~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 179 RDARQWLNS-GHINDVRHAKSGGTALHVAAAKGY----------------------------TEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHHHHH-TCCCCCCCTTTCCCHHHHHHHHTC----------------------------HHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHHhc-cCcchhhhcCCCCCHHHHHHHCCc----------------------------HHHHHHHHHcCCCCCCcC
Confidence 344556665 455555678899999999999997 999999999999887665
Q ss_pred hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhc
Q 007858 274 VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEM 337 (587)
Q Consensus 274 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 337 (587)
..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++. ..+.++.+++.
T Consensus 230 -----~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 230 -----YDGWTPLHAAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp -----TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred -----CCCCcHHHHHHhcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 4889999999999999999999999999 799999999999999764 34455555443
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=278.35 Aligned_cols=216 Identities=20% Similarity=0.231 Sum_probs=164.9
Q ss_pred CCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHH
Q 007858 53 GDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132 (587)
Q Consensus 53 g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~ 132 (587)
|+.+++++|+ +.+.+++...|.+|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++
T Consensus 2 g~~~~i~~Ll--~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 2 DAPAVISDFI--YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS--AD-ANIQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp ---CCEETTE--ETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CcHHHHHHHH--HcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcC--CC-CCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 5666777777 5566666555677788888888888888888888777 66 77777778888888888888888888
Q ss_pred HHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccc
Q 007858 133 MLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATH 212 (587)
Q Consensus 133 Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d 212 (587)
|+++++...+..+..|.||||+|+..|+.+++++|++.++ .++.+|
T Consensus 77 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----------------------------------~~~~~~ 122 (223)
T 2f8y_A 77 LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA----------------------------------DVNAVD 122 (223)
T ss_dssp HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----------------------------------CTTCBC
T ss_pred HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC----------------------------------CCcCcC
Confidence 8877763347777777788888887777777777777665 344455
Q ss_pred cCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcC
Q 007858 213 AKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSG 292 (587)
Q Consensus 213 ~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g 292 (587)
..|.||||+|+..++ .+++++|+++|.+++..+ ..|.||||+|+..|
T Consensus 123 ~~g~t~L~~A~~~~~----------------------------~~~v~~Ll~~g~~~~~~~-----~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 123 DLGKSALHWAAAVNN----------------------------VDAAVVLLKNGANKDMQN-----NREETPLFLAAREG 169 (223)
T ss_dssp TTSCBHHHHHHHTTC----------------------------HHHHHHHHHTTCCTTCCC-----TTCCCHHHHHHHHT
T ss_pred CCCCcHHHHHHHcCC----------------------------HHHHHHHHHcCCCCCCcC-----CCCcCHHHHHHHcC
Confidence 666666666666665 666777776666665443 36788888899999
Q ss_pred cHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcch
Q 007858 293 NFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDK 341 (587)
Q Consensus 293 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 341 (587)
+.+++++|++++++ ++.+|..|+||||+|+.+++.+++++|+++|+..
T Consensus 170 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 170 SYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 99999999999999 6899999999999999999999999999999864
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=306.49 Aligned_cols=258 Identities=11% Similarity=0.027 Sum_probs=191.9
Q ss_pred cCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCcccc-----------------CCCCC
Q 007858 52 KGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSL-----------------QDENG 114 (587)
Q Consensus 52 ~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~-----------------~d~~g 114 (587)
....+++++|+ +.+.+++.. +..|.|+++ |+.++|+.|+++| .+ .+. +....
T Consensus 29 ~~~~dlv~~ll--~~ga~i~~~-~~~g~~~~~-----g~~~~v~~Ll~~g--~~-~~~~~~~~a~~~~~~~~~~~~~~~~ 97 (327)
T 1sw6_A 29 TFTHDLTSDFL--SSPLKIMKA-LPSPVVNDN-----EQKMKLEAFLQRL--LF-PEIQEMPTSLNNDSSNRNSEGGSSN 97 (327)
T ss_dssp ECCTTCCCSTT--TSSCCCEEC-BCCCCCCCH-----HHHHHHHHHHHHH--HC--------------------------
T ss_pred hhcCchHHHHh--hCCcccccC-CCCCCcccC-----chhHHHHHHHHhc--cC-CccccchHhhhcccccccccccCCc
Confidence 34456677777 678888777 788888877 8888888888887 33 222 11112
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCccccc-CCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc
Q 007858 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTI-RGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGL 192 (587)
Q Consensus 115 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~ 192 (587)
.+.+|.|+..+..+++++|++.|+++ +. +|.+|.||||+|+..|+.+++++|+++++ ++..+.+|.||||.|+..|+
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ------CHHHHHHHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred cchhHHHHHhhHHHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 23357777777788888888888886 66 78888888888888888888888888888 77888888888888888887
Q ss_pred ---HHHHHHHHHhcccccccccccCCchHHHHHhh----CCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHH
Q 007858 193 ---YGLALQLLKKNKKLLAGATHAKYGTAMHMLAR----NPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE 265 (587)
Q Consensus 193 ---~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ 265 (587)
.+.++.|++. ....++.+|..|+||||+|+. .++ .++++.|++.
T Consensus 177 ~~~~~~~~~ll~~-~~~~~~~~d~~g~tpLh~A~~~~~~~g~----------------------------~~~v~~Ll~~ 227 (327)
T 1sw6_A 177 NYDSGTFEALLDY-LYPCLILEDSMNRTILHHIIITSGMTGC----------------------------SAAAKYYLDI 227 (327)
T ss_dssp HHHTTCHHHHHHH-HGGGGGEECTTCCCHHHHHHHHHTSTTC----------------------------HHHHHHHHHH
T ss_pred cccHHHHHHHHHh-hhccccCCCCCCCCHHHHHHHHcccccc----------------------------HHHHHHHHHH
Confidence 6778888887 446778888899999999987 665 7888888887
Q ss_pred hhccc---------------hhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhH
Q 007858 266 ISKST---------------HKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADT 330 (587)
Q Consensus 266 ~~~~~---------------~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~i 330 (587)
+.... ..+.+..+..|.||||.|+. +++|+++ + ++.+|.+|+||||+|+.+|+.++
T Consensus 228 ~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~-~n~~d~~G~TpLh~A~~~g~~~~ 298 (327)
T 1sw6_A 228 LMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--M-LNAQDSNGDTCLNIAARLGNISI 298 (327)
T ss_dssp HHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--T-TTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--C-CCCCCCCCCCHHHHHHHcCCHHH
Confidence 43211 11222334588999999986 8999998 4 67899999999999999999999
Q ss_pred HHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC
Q 007858 331 FKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS 363 (587)
Q Consensus 331 v~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~ 363 (587)
+++|+++|++++ .+|.+|+||||+|++.|
T Consensus 299 v~~Ll~~Gad~~----~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 299 VDALLDYGADPF----IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHTTCCTT----CCCTTSCCGGGGTCC--
T ss_pred HHHHHHcCCCCc----ccCCCCCCHHHHHHhcC
Confidence 999999999976 79999999999998764
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=273.79 Aligned_cols=229 Identities=14% Similarity=0.143 Sum_probs=206.8
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..+.|+||.|+..|+.++++.|+ +.+.+++.. +..|.||||+|+..|+.+++++|++.+ .+.....+..|.|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t 78 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELV--EAGYDVRQP-DKENVTLLHWAAINNRIDLVKYYISKG--AIVDQLGGDLNST 78 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCBTTTTBC
T ss_pred ccccccchHHHHHHHcCChHHHHHHH--HcCCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcC--CcchhhcCCcCCC
Confidence 35678899999999999999999999 677888877 899999999999999999999999998 6623445566999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc-HH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGL-YG 194 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~-~~ 194 (587)
|||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||||.|+..+. .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 999999999999999999999995 8899999999999999999999999999998 88899999999999997766 78
Q ss_pred HHHHHHHhccccccccccc-CCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhh
Q 007858 195 LALQLLKKNKKLLAGATHA-KYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 195 ~v~~Ll~~~~~~~~~~~d~-~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
+++.|++. +...+..+. .|.||||+|+..++ .+++++|+++|++++..+
T Consensus 158 ~~~~L~~~--~~~~~~~~~~~g~t~L~~A~~~~~----------------------------~~~v~~Ll~~g~~~~~~~ 207 (240)
T 3eu9_A 158 PTRLLLTF--NVSVNLGDKYHKNTALHWAVLAGN----------------------------TTVISLLLEAGANVDAQN 207 (240)
T ss_dssp THHHHHHT--TCCTTCCCTTTCCCHHHHHHHHTC----------------------------HHHHHHHHHHTCCTTCBC
T ss_pred HHHHHHhc--CCCcchhhccCCCcHHHHHHHcCC----------------------------HHHHHHHHHcCCCCCCcC
Confidence 88888887 788887886 89999999999997 999999999999887665
Q ss_pred hhhhccCCChHHHHHHHcCcHHHHHHHHHhCCC
Q 007858 274 VLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPD 306 (587)
Q Consensus 274 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~ 306 (587)
..|.||||+|++.|+.+++++|++++++
T Consensus 208 -----~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 208 -----IKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp -----TTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -----CCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 3789999999999999999999999877
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=287.04 Aligned_cols=226 Identities=11% Similarity=0.098 Sum_probs=200.1
Q ss_pred CHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhh
Q 007858 90 QTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169 (587)
Q Consensus 90 ~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (587)
..++.++|.+. + ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+ +|.||||+|+..|+.+++++|++
T Consensus 12 ~~~v~~lL~~~----~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 12 SKQLKSFLSSK----D-TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLF 83 (285)
T ss_dssp HHHHHHHHHST----T-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHH
T ss_pred HHHHHHHHHhC----C-CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHH
Confidence 34555555544 3 7899999999999999999999999999999996 655 49999999999999999999999
Q ss_pred cCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCC-chHHHHHhhCCCCcccCCCCCccccchhhhhc
Q 007858 170 QNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKY-GTAMHMLARNPSAFTSNCPGWLKVPGIKFITN 247 (587)
Q Consensus 170 ~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g-~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
+++ ++..+..|.||||.|+..|+.++++.|+++ +..++.+|..| .||||+|+..++
T Consensus 84 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~~t~L~~A~~~~~-------------------- 141 (285)
T 3kea_A 84 SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK--NWRLMFYGKTGWKTSFYHAVMLND-------------------- 141 (285)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCSSSGGGSHHHHHHHTTC--------------------
T ss_pred CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc--CCCCCccCCCCCCCHHHHHHHcCC--------------------
Confidence 999 888999999999999999999999999998 88899999999 899999999998
Q ss_pred cCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCch-HHHHHHcC
Q 007858 248 NTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSI-FHIAVMHR 326 (587)
Q Consensus 248 ~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~ 326 (587)
.+++++|++++.+.... ..|.||||.|+..|+.+++++|+++|++ ++.+|..|+|| ||+|+.+|
T Consensus 142 --------~~~v~~Ll~~g~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 142 --------VSIVSYFLSEIPSTFDL------AILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp --------HHHHHHHHTTSCTTCCC------STHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHT
T ss_pred --------HHHHHHHHhCCCccccc------cCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCChHHHHHHHcC
Confidence 99999999998766332 1569999999999999999999999999 79999999998 99999999
Q ss_pred ChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 327 HADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 327 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+.+++++|+++|++++ .+| +.|+..++.++++.|
T Consensus 207 ~~~~v~~Ll~~gad~~----~~~-------~~a~~~~~~~iv~~L 240 (285)
T 3kea_A 207 DIEMLQALFKYDINIY----SAN-------LENVLLDDAEIAKMI 240 (285)
T ss_dssp CHHHHHHHTTSCBCST----TTT-------GGGGTTTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCC----CCC-------hhhhhcCCHHHHHHH
Confidence 9999999999999976 455 355667776655544
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=272.15 Aligned_cols=194 Identities=16% Similarity=0.145 Sum_probs=167.0
Q ss_pred CCCCCCcCCCC----cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHcc
Q 007858 26 ANSVQPLQNDK----KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELT 101 (587)
Q Consensus 26 ~~~~~~l~~~~----~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~ 101 (587)
+....+++.+. ..+..|+||||.|+..|+.++++.|+ +.+.+++.. +..|.||||+|+..|+.+++++|++.+
T Consensus 5 ~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL--EASADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred HHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHH--HcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 33444555443 34678999999999999999999999 678888877 899999999999999999999999998
Q ss_pred CCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCC
Q 007858 102 GHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDL 180 (587)
Q Consensus 102 ~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g 180 (587)
..+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|
T Consensus 82 -~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 82 -ATD-LDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp -TSC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred -CCC-cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 236 8899999999999999999999999999999996 8999999999999999999999999999988 77778888
Q ss_pred chHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 181 ENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 181 ~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.||||.|+..++.++++.|+++ +..++.+|..|.||||+|+..++
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDH--FANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHc--CCCCccccccCCCHHHHHHHhcc
Confidence 8888888888888888888886 66666677777777777776665
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=280.01 Aligned_cols=224 Identities=15% Similarity=0.155 Sum_probs=185.4
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHccCC--CCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcH
Q 007858 74 VTKGYQTILHVATGAKQTNFVKQMVELTGH--DNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTP 151 (587)
Q Consensus 74 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~--~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tp 151 (587)
.|.+|.||||+|+..|+.+++++|++.+.. .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 81 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAF-LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTP 81 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCC-CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHH-hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCH
Confidence 378899999999999999999999887621 25 8889999999999999999999999999999985 8899999999
Q ss_pred HHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcc
Q 007858 152 LYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFT 230 (587)
Q Consensus 152 L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~ 230 (587)
||+|+..|+.+++++|++.++ .. .+...+..+..|.||||+|+..++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~-----------------------------~~~~~~~~~~~g~t~L~~A~~~~~--- 129 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPH-----------------------------LHSILKATNYNGHTCLHLASIHGY--- 129 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTS-----------------------------SSCGGGCCCTTCCCHHHHHHHTTC---
T ss_pred HHHHHHcCCHHHHHHHHhcccchh-----------------------------HHHHhhccCCCCCCHHHHHHHcCC---
Confidence 999999999999999999875 11 123345677788888888888887
Q ss_pred cCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCcccc
Q 007858 231 SNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQ 310 (587)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~ 310 (587)
.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 130 -------------------------~~~v~~Ll~~g~~~~~~~~----~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~ 179 (236)
T 1ikn_D 130 -------------------------LGIVELLVSLGADVNAQEP----CNGRTALHLAVDLQNPDLVSLLLKCGAD-VNR 179 (236)
T ss_dssp -------------------------HHHHHHHHHHTCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCC
T ss_pred -------------------------HHHHHHHHHcCCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCc
Confidence 8888888888887775432 2679999999999999999999999999 799
Q ss_pred ccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcC
Q 007858 311 LDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYS 363 (587)
Q Consensus 311 ~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~ 363 (587)
.|..|+||||+|+.+|+.+++++|+++|++.. ...++.+|.||.+.+....
T Consensus 180 ~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 180 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL--QMLPESEDEESYDTESEFT 230 (236)
T ss_dssp CCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG--SSCCCCCTTTCCCCC----
T ss_pred ccCCCCCHHHHHHccCchHHHHHHHHcchhhh--hcCCccchHHHHhhhcccc
Confidence 99999999999999999999999999999865 3468999999988776544
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-32 Score=252.32 Aligned_cols=196 Identities=17% Similarity=0.160 Sum_probs=111.4
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
.+.||||.|+..|+.+.++.|++.+ +.+ ++.+|..|.||||+|++.|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~-~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDT-TYQ-VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAG 80 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCT-TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcC-CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 3445555555555555555555444 123 4444455555555555555555555555555543 444445555555555
Q ss_pred HhCChHHHHHHhhcCC--CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCC
Q 007858 157 LFGQSKMASFLYRQNE--DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCP 234 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~ 234 (587)
..|+.+++++|++.+. .+..+..|.||||.|+..++.++++.|+++ .+..++.+|..|.||||+|+..++.
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~------ 153 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED-GREDIDFQNDFGYTALIEAVGLREG------ 153 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHH-CCCCTTCCCTTSCCHHHHHHHSSCC------
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCCCCHHHHHHHhccc------
Confidence 5555555555543322 222333333333333333333333333333 1245555666666666666655420
Q ss_pred CCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCC
Q 007858 235 GWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDEN 314 (587)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~ 314 (587)
..++.+++++|+++|++ ++.+|..
T Consensus 154 -------------------------------------------------------~~~~~~~v~~Ll~~ga~-~~~~~~~ 177 (201)
T 3hra_A 154 -------------------------------------------------------NQLYQDIVKLLMENGAD-QSIKDNS 177 (201)
T ss_dssp -------------------------------------------------------SHHHHHHHHHHHHTTCC-TTCCCTT
T ss_pred -------------------------------------------------------hhhHHHHHHHHHHCCCC-CCccCCC
Confidence 01238899999999999 6899999
Q ss_pred CCchHHHHHHcCChhHHHHHHhcC
Q 007858 315 GRSIFHIAVMHRHADTFKLIYEMG 338 (587)
Q Consensus 315 g~t~Lh~A~~~~~~~iv~~Ll~~g 338 (587)
|+||||+|+.+|+.+++++|+++|
T Consensus 178 g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 178 GRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999999999999999999876
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=5.3e-33 Score=280.29 Aligned_cols=248 Identities=15% Similarity=0.046 Sum_probs=189.3
Q ss_pred CCCCCCcCCCC---cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhh----------------cCCCCCcHHHHHH
Q 007858 26 ANSVQPLQNDK---KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAA----------------VTKGYQTILHVAT 86 (587)
Q Consensus 26 ~~~~~~l~~~~---~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~----------------~~~~g~t~Lh~A~ 86 (587)
+....+++.+. ..+..|.|+++ |+.++++.|+ +.+.+.+.. ......+.+|.|+
T Consensus 33 dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll--~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~ 105 (327)
T 1sw6_A 33 DLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFL--QRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF 105 (327)
T ss_dssp TCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHH--HHHHC-------------------------------CH
T ss_pred chHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHH--HhccCCccccchHhhhcccccccccccCCccchhHHHH
Confidence 33444556654 34578899887 9999999999 445443320 0111223458888
Q ss_pred hcCCHHHHHHHHHccCCCCcccc-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCC---hH
Q 007858 87 GAKQTNFVKQMVELTGHDNLLSL-QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ---SK 162 (587)
Q Consensus 87 ~~g~~~iv~~Ll~~~~~~~ll~~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~---~~ 162 (587)
..+..++++.|++.+ .+ ++. +|..|.||||+|+..|+.++|++|+++|+++ +.+|.+|.||||+|+..|+ .+
T Consensus 106 ~~~~~~~~~~l~~~g--~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 106 DSLLQEVNDAFPNTQ--LN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp HHHHHHHHHHCTTSC--CC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HhhHHHHHHHHHhcC--CC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHH
Confidence 888899999999998 88 899 8999999999999999999999999999996 8999999999999999998 78
Q ss_pred HHHHHhhcCC--CCCCCCCCchHHHHHHH----hCcHHHHHHHHHhcc------------------cccccccccCCchH
Q 007858 163 MASFLYRQNE--DNLEPDDLENTFFVSIE----TGLYGLALQLLKKNK------------------KLLAGATHAKYGTA 218 (587)
Q Consensus 163 ~v~~Ll~~~~--~~~~~~~g~t~l~~a~~----~~~~~~v~~Ll~~~~------------------~~~~~~~d~~g~t~ 218 (587)
+++.|++.+. .+..+.+|.||||+|+. .|+.++++.|++... +..++.++..|.||
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~ 261 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence 8888888873 77799999999999999 899999999998621 67778889999999
Q ss_pred HHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHH
Q 007858 219 MHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLA 298 (587)
Q Consensus 219 Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~ 298 (587)
||.|+. +++|++++ ++.. +..|.||||+|++.|+.++++
T Consensus 262 L~~a~~----------------------------------~~~Ll~~~--~n~~-----d~~G~TpLh~A~~~g~~~~v~ 300 (327)
T 1sw6_A 262 ILENLD----------------------------------LKWIIANM--LNAQ-----DSNGDTCLNIAARLGNISIVD 300 (327)
T ss_dssp HHHHCS----------------------------------HHHHHHHT--TTCC-----CTTSCCHHHHHHHHCCHHHHH
T ss_pred hHHHHH----------------------------------HHHHHHhC--CCCC-----CCCCCCHHHHHHHcCCHHHHH
Confidence 999852 56777763 3333 347899999999999999999
Q ss_pred HHHHhCCCccccccCCCCchHHHHHHcC
Q 007858 299 VLTRSYPDLVHQLDENGRSIFHIAVMHR 326 (587)
Q Consensus 299 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 326 (587)
+|+++|++ ++.+|.+|+||||+|+++|
T Consensus 301 ~Ll~~Gad-~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 301 ALLDYGAD-PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHTTCC-TTCCCTTSCCGGGGTCC--
T ss_pred HHHHcCCC-CcccCCCCCCHHHHHHhcC
Confidence 99999999 7999999999999998764
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=248.06 Aligned_cols=193 Identities=19% Similarity=0.178 Sum_probs=177.5
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
...+.||||.|+..|+.+.++.++ +..+.+++.. |.+|.||||+|+..|+.++|++|++.| ++ ++.+|..|.|||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~l 76 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEIL-QDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRG--AD-INLQNSISDSPY 76 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHH-TCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHH
T ss_pred CcccccHHHHHHHhccHHHHHHHH-HcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCCCCCCCCCHH
Confidence 356899999999999999999999 6666688877 899999999999999999999999999 88 999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC-C-CCCCCCCCchHHHHHHHhCc----
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN-E-DNLEPDDLENTFFVSIETGL---- 192 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~-~-~~~~~~~g~t~l~~a~~~~~---- 192 (587)
|+|+..|+.+++++|++.+...++.+|..|.||||+|+..|+.+++++|++.+ . .+..+..|.||||.|+..+.
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 99999999999999995544335899999999999999999999999999999 4 78899999999999999887
Q ss_pred -HHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 193 -YGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 193 -~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
.++++.|+++ +..++.+|..|.||||+|+..++ .+++++|+++|
T Consensus 157 ~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~----------------------------~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMEN--GADQSIKDNSGRTAMDYANQKGY----------------------------TEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTC----------------------------HHHHHHHHTCC
T ss_pred HHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHcCC----------------------------HhHHHHHHhcC
Confidence 9999999998 89999999999999999999997 89999998754
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=263.18 Aligned_cols=184 Identities=16% Similarity=0.128 Sum_probs=148.4
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCc---cchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCC
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQ---SMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDEN 113 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~ 113 (587)
..+.+|.||||.|+..|+.++++.|+ +... .+++.. +..|.||||+|+..|+.++|++|++.| ++ ++.+|..
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~ 77 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVI-RQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAG--CD-PELRDFR 77 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCC-C-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCC--CC-SCCCCTT
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHH-HHhhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCCcCCC
Confidence 45788999999999999999999999 4322 257766 889999999999999999999999998 88 9999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCc-----ccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCC-CCchHHHH
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPN-----LLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPD-DLENTFFV 186 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~-----l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~-~g~t~l~~ 186 (587)
|.||||+|+..|+.+++++|++.+++ ..+..|..|.||||+|+..|+.+++++|+++++ .+..+. .|.||||+
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL 157 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999864 236788899999999999999999999999987 555555 67777777
Q ss_pred HHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 187 SIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 187 a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
|+..|+.+++++|+++ ++.++.+|..|.||||+|+..++
T Consensus 158 A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 158 AVDLQNPDLVSLLLKC--GADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHHTTCHHHHHHHHTT--TCCSCCCCTTCCCGGGGCTTSSC
T ss_pred HHHcCCHHHHHHHHHc--CCCCCcccCCCCCHHHHHHccCc
Confidence 7777777777777665 56666666666666665555443
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=256.39 Aligned_cols=196 Identities=13% Similarity=0.113 Sum_probs=173.8
Q ss_pred CCChHhHHHHHcCCHHHH----HHHHhhcCccchhh---hcCCCCCcHHHHHHhc---CCHHHHHHHHHccCCCCccc--
Q 007858 41 HKCVPLYKAALKGDCNEA----KRILGDDHQSMLRA---AVTKGYQTILHVATGA---KQTNFVKQMVELTGHDNLLS-- 108 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v----~~Ll~~~~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~ll~-- 108 (587)
.|+||||.|+..|+.+.+ ++++ +.+.+++. ..|.+|.||||+|+.. |+.++|++|++.+ ++ ++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~--~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~-~~~~ 75 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLR--WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID--KD-SGNP 75 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHH--HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH--HH-TTCS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHH--HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC--Cc-ccch
Confidence 478999999999999855 4444 56778886 2389999999999999 9999999999998 44 33
Q ss_pred ---------cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCC-------------CCcHHHHHHHhCChHHHHH
Q 007858 109 ---------LQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGG-------------QMTPLYIAALFGQSKMASF 166 (587)
Q Consensus 109 ---------~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~-------------g~tpL~~A~~~g~~~~v~~ 166 (587)
.+|..|.||||+|+..|+.+++++|+++|+++ +.+|.. |.||||+|+..|+.+++++
T Consensus 76 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 76 KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp SCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 24578999999999999999999999999996 777776 9999999999999999999
Q ss_pred Hhh---cCC-CCCCCCCCchHHHHHHH--hCcHH-------HHHHHHHhcccccc-------cccccCCchHHHHHhhCC
Q 007858 167 LYR---QNE-DNLEPDDLENTFFVSIE--TGLYG-------LALQLLKKNKKLLA-------GATHAKYGTAMHMLARNP 226 (587)
Q Consensus 167 Ll~---~~~-~~~~~~~g~t~l~~a~~--~~~~~-------~v~~Ll~~~~~~~~-------~~~d~~g~t~Lh~a~~~~ 226 (587)
|++ .++ .+..|.+|.||||+|+. .++.+ +++.|++. ++.+ +.+|..|.||||+|+..+
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM--GARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH--HHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc--CCCcccccccccccCCCCCCHHHHHHHhC
Confidence 999 787 88899999999999999 78888 99999998 7877 889999999999999999
Q ss_pred CCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchh
Q 007858 227 SAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHK 272 (587)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~ 272 (587)
+ .+++++|+++|.+....
T Consensus 233 ~----------------------------~~~v~~Ll~~g~~~~~~ 250 (256)
T 2etb_A 233 K----------------------------IEIFRHILQREFSGAAA 250 (256)
T ss_dssp C----------------------------HHHHHHHHHHHHHHHHH
T ss_pred C----------------------------HHHHHHHHhCCCCCCCc
Confidence 8 99999999999876543
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-31 Score=255.99 Aligned_cols=201 Identities=15% Similarity=0.072 Sum_probs=165.1
Q ss_pred CCCcHHHHHHhcCCHH----HHHHHHHccCCCCcccc----CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccc---
Q 007858 77 GYQTILHVATGAKQTN----FVKQMVELTGHDNLLSL----QDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLLT--- 142 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~----iv~~Ll~~~~~~~ll~~----~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~--- 142 (587)
.|+||||.|+..|+.+ ++++|++.+ .+ ++. +|..|.||||+|+.. |+.+++++|++.|++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g--~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNS--KY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcC--CC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh
Confidence 3789999999999997 667777788 78 887 899999999999999 999999999999887521
Q ss_pred -------cCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCC-------------CchHHHHHHHhCcHHHHHHHHH
Q 007858 143 -------IRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDD-------------LENTFFVSIETGLYGLALQLLK 201 (587)
Q Consensus 143 -------~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~-------------g~t~l~~a~~~~~~~~v~~Ll~ 201 (587)
.+|..|.||||+|+..|+.+++++|+++++ .+..+.. |.||||.|+..|+.+++++|++
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 234779999999999999999999999998 7777765 9999999999999999999999
Q ss_pred ---hcccccccccccCCchHHHHHhh--CCCCcccCCCCCccccchhhhhccCCCchHHHH-------HHHHHHHHhhcc
Q 007858 202 ---KNKKLLAGATHAKYGTAMHMLAR--NPSAFTSNCPGWLKVPGIKFITNNTDSSTQALE-------LVKCLWKEISKS 269 (587)
Q Consensus 202 ---~~~~~~~~~~d~~g~t~Lh~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~Ll~~~~~~ 269 (587)
. +.+++.+|.+|+||||+|+. .++ .+ ++++|+++|+++
T Consensus 158 ~~~~--ga~~n~~d~~g~TpLh~A~~~~~~~----------------------------~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 158 NPHQ--PASLEATDSLGNTVLHALVMIADNS----------------------------PENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CSSC--CCCTTCCCTTSCCHHHHHHHHCCSC----------------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc--CCCcCccCCCCCCHHHHHHHcccCC----------------------------chhhHHHHHHHHHHHHcCCCc
Confidence 7 88999999999999999998 543 34 455555554443
Q ss_pred chhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 270 THKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 270 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
+... +..+.+|..|+||||+|+..|+.+++++|+++|.+..
T Consensus 208 ~~~~--------------------------------~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 208 CPTV--------------------------------QLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp STTC--------------------------------CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cccc--------------------------------ccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 2110 0016778888888888888888888888888877654
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=256.87 Aligned_cols=202 Identities=14% Similarity=0.128 Sum_probs=171.5
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhh---cCccchh---hhcCCCCCcHHHHHHhc---CCHHHHHHHHHccCCCCc
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGD---DHQSMLR---AAVTKGYQTILHVATGA---KQTNFVKQMVELTGHDNL 106 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~---~~~~~~~---~~~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~l 106 (587)
...+..|.||||.|+..|+.++|+.|+ + +.+.+++ ...+..|.||||+|+.. |+.++|++|++.+ ++.
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g--a~~ 83 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLL-PFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA--RKT 83 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHH-HHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH--HHT
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHH-HHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh--ccc
Confidence 346788999999999999999999998 4 2444443 23378999999999987 9999999999997 320
Q ss_pred ----------cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCC--------------CCCcHHHHHHHhCChH
Q 007858 107 ----------LSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGG--------------GQMTPLYIAALFGQSK 162 (587)
Q Consensus 107 ----------l~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~--------------~g~tpL~~A~~~g~~~ 162 (587)
...+|..|.||||+|+..|+.++|++|+++|+++ +.++. .|.||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 2236779999999999999999999999999996 77776 7999999999999999
Q ss_pred HHHHHhh---cCC-CCCCCCCCchHHHHHHHhCc---------HHHHHHHHHhccccccc-------ccccCCchHHHHH
Q 007858 163 MASFLYR---QNE-DNLEPDDLENTFFVSIETGL---------YGLALQLLKKNKKLLAG-------ATHAKYGTAMHML 222 (587)
Q Consensus 163 ~v~~Ll~---~~~-~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~~~~~~~~-------~~d~~g~t~Lh~a 222 (587)
++++|++ .++ .+..|.+|.||||+|+..++ .++++.|++. +..++ .+|..|.||||+|
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~--ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL--GAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH--HHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh--hhhcccccccccccCCCCCCHHHHH
Confidence 9999999 777 88899999999999999888 7999999998 77765 5899999999999
Q ss_pred hhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhh-ccch
Q 007858 223 ARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS-KSTH 271 (587)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~-~~~~ 271 (587)
+..++ .+++++|+++|+ ++..
T Consensus 241 ~~~g~----------------------------~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 241 ASSGK----------------------------IGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHTTC----------------------------HHHHHHHHHHHTC----
T ss_pred HHhCh----------------------------HHHHHHHHHCCCCCchh
Confidence 99998 999999999998 4443
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=232.51 Aligned_cols=157 Identities=20% Similarity=0.263 Sum_probs=147.1
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
++|+.||+.|+.++|+.|+ +.+++++.+ |.+|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll--~~Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad-~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI--ENGADVNAS-DSDGRTPLHHAAENGHKEVVKLLISKG--AD-VNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH--HCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcc--cc-hhhhccCCCCHHHHHHH
Confidence 4699999999999999999 789999988 999999999999999999999999999 88 99999999999999999
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 124 VGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 124 ~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
.|+.+++++|+++|+++ +.+|.+|+||||+|+..|+.+++++|++.++ ++..|.+|.||||+|+..|+.++++.|+++
T Consensus 80 ~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 99999999999999996 9999999999999999999999999999999 888999999999999999999999999997
Q ss_pred ccccccc
Q 007858 203 NKKLLAG 209 (587)
Q Consensus 203 ~~~~~~~ 209 (587)
|+.++
T Consensus 159 --GA~ie 163 (169)
T 4gpm_A 159 --GGWLE 163 (169)
T ss_dssp -------
T ss_pred --CCCcC
Confidence 66543
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=257.49 Aligned_cols=222 Identities=12% Similarity=0.071 Sum_probs=171.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcc--CCCCccc----cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCccc----
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELT--GHDNLLS----LQDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLL---- 141 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~--~~~~ll~----~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~---- 141 (587)
|..|.||||.|++.|+.++|+.|++.+ ...+ ++ .+|..|.||||+|+.. |+.+++++|++.|++..
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKR-LTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCC-TTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccc-cCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 888999999999999999999888753 1244 33 4588999999999987 99999999999986521
Q ss_pred --c----cCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccC
Q 007858 142 --T----IRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAK 214 (587)
Q Consensus 142 --~----~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~ 214 (587)
+ .+|..|.||||+|+..|+.+++++|+++++ .+..+..+.. ........+..
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~---------------------~~~~~~~~~~~ 147 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF---------------------KKTKGRPGFYF 147 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG---------------------SSCSSSCCCCS
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc---------------------ccccccccccC
Confidence 2 256789999999999999999999999887 5554443310 11223345668
Q ss_pred CchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHH---HhhccchhhhhhhccCCChHHHHHHHc
Q 007858 215 YGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWK---EISKSTHKDVLKLISKPSKLLFDAAHS 291 (587)
Q Consensus 215 g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~g~t~Lh~Aa~~ 291 (587)
|.||||+|+..++ .+++++|++ .|.+++..+. .|.||||+|+..
T Consensus 148 g~tpL~~A~~~g~----------------------------~~~v~~Ll~~~~~gad~~~~d~-----~g~tpLh~A~~~ 194 (273)
T 2pnn_A 148 GELPLSLAACTNQ----------------------------LAIVKFLLQNSWQPADISARDS-----VGNTVLHALVEV 194 (273)
T ss_dssp CBSHHHHHHHTTC----------------------------HHHHHHHHHCSSCCCCTTCCCT-----TSCCHHHHHHHH
T ss_pred CCCHHHHHHHcCC----------------------------HHHHHHHHhcccCCCCceeeCC-----CCCcHHHHHHHc
Confidence 9999999999997 999999999 8888886654 889999999999
Q ss_pred Cc---------HHHHHHHHHhCCCccc-------cccCCCCchHHHHHHcCChhHHHHHHhcCc-chhhhhhhccCCCCc
Q 007858 292 GN---------FKFLAVLTRSYPDLVH-------QLDENGRSIFHIAVMHRHADTFKLIYEMGF-DKELIATYVDVSGNN 354 (587)
Q Consensus 292 g~---------~~iv~~Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~-~~~~~~~~~d~~G~T 354 (587)
|+ .+++++|+++|++ ++ .+|..|+||||+|+.+|+.+++++|+++|+ |+. .....+.+
T Consensus 195 ~~~~~~~~~~~~~~v~~Ll~~ga~-~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~----~~~~~~~~ 269 (273)
T 2pnn_A 195 ADNTVDNTKFVTSMYNEILILGAK-LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPE----CRHAAAHH 269 (273)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---------------
T ss_pred cCcchhHHHHHHHHHHHHHHhhhh-cccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCch----hhhhhhhh
Confidence 88 8999999999988 44 589999999999999999999999999999 654 35555555
Q ss_pred HH
Q 007858 355 LL 356 (587)
Q Consensus 355 pL 356 (587)
|-
T Consensus 270 ~~ 271 (273)
T 2pnn_A 270 HH 271 (273)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-30 Score=229.99 Aligned_cols=158 Identities=20% Similarity=0.246 Sum_probs=147.6
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
++|+.||+.|+.++|+.|++.| ++ ++.+|.+|.||||+|+..++.+++++|+++|+++ +.+|.+|.||||+|+..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G--ad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG--AD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcC
Confidence 4799999999999999999999 99 9999999999999999999999999999999996 999999999999999999
Q ss_pred ChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCcc
Q 007858 160 QSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLK 238 (587)
Q Consensus 160 ~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~ 238 (587)
+.+++++|+++++ ++..|.+|.||||+|+..|+.++++.|++. +++++.+|.+|+||||+|+..++
T Consensus 82 ~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~g~----------- 148 (169)
T 4gpm_A 82 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK--GADVNTSDSDGRTPLDLAREHGN----------- 148 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTC-----------
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCC-----------
Confidence 9999999999999 889999999999999999999999999998 89999999999999999999998
Q ss_pred ccchhhhhccCCCchHHHHHHHHHHHHhhccch
Q 007858 239 VPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271 (587)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~ 271 (587)
.+++++|+++|++++.
T Consensus 149 -----------------~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 149 -----------------EEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -----------------HHHHHHHHTC------
T ss_pred -----------------HHHHHHHHHCCCCcCC
Confidence 9999999999998864
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=250.43 Aligned_cols=200 Identities=12% Similarity=0.106 Sum_probs=174.1
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhh---cCccchhhh---cCCCCCcHHHHHH---hcCCHHHHHHHHHccCC------
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGD---DHQSMLRAA---VTKGYQTILHVAT---GAKQTNFVKQMVELTGH------ 103 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~---~~~~~~~~~---~~~~g~t~Lh~A~---~~g~~~iv~~Ll~~~~~------ 103 (587)
+..++++||.|++.|+.+.++.|+ + +.+.+++.. .+..|.||||+|+ +.|+.++|++|++.+..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll-~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLL-SFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHH-HHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHH-HHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 456899999999999999777776 3 356666644 1377999999999 77999999999998711
Q ss_pred ---CCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCC--------------CCCCcHHHHHHHhCChHHHHH
Q 007858 104 ---DNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG--------------GGQMTPLYIAALFGQSKMASF 166 (587)
Q Consensus 104 ---~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~--------------~~g~tpL~~A~~~g~~~~v~~ 166 (587)
.+ .+..|..|.||||+|+..|+.++|++|+++|+++ +.++ ..|.||||+|+..|+.+++++
T Consensus 81 ~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 81 FINSP-FRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HHTCC-BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhccc-ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 23 4556679999999999999999999999999996 7777 689999999999999999999
Q ss_pred Hhh---cCC-CCCCCCCCchHHHHHHHhCc---------HHHHHHHHHhcccccc-------cccccCCchHHHHHhhCC
Q 007858 167 LYR---QNE-DNLEPDDLENTFFVSIETGL---------YGLALQLLKKNKKLLA-------GATHAKYGTAMHMLARNP 226 (587)
Q Consensus 167 Ll~---~~~-~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~~~~~~~-------~~~d~~g~t~Lh~a~~~~ 226 (587)
|++ .++ .+..|.+|.||||.|+..++ .++++.|+++ ++.+ +.+|..|.||||+|+..|
T Consensus 159 Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 159 LTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK--CAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH--HHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh--CcccccccchhhcccCCCCCHHHHHHHcC
Confidence 999 777 88899999999999998877 6999999998 7777 679999999999999999
Q ss_pred CCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccch
Q 007858 227 SAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271 (587)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~ 271 (587)
+ .+++++|+++|.+...
T Consensus 237 ~----------------------------~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 237 K----------------------------IGIFQHIIRREIADAA 253 (260)
T ss_dssp C----------------------------HHHHHHHHHHHHHHHC
T ss_pred C----------------------------HHHHHHHHHhCCCccc
Confidence 8 9999999999986654
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=251.79 Aligned_cols=210 Identities=13% Similarity=0.077 Sum_probs=164.1
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHH----ccCCCCccccCC----CCCCcHHHHHH---HcCCHHHHHHHHhcCCcc---
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVE----LTGHDNLLSLQD----ENGNTAFCFAA---AVGSVEIAQFMLQRNPNL--- 140 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~----~~~~~~ll~~~d----~~g~TpLh~Aa---~~g~~~iv~~Ll~~~~~l--- 140 (587)
+..|.|+||.|++.|+.+.|+.|++ .+ .+ ++..+ ..|.||||+|+ +.|+.+++++|++.|++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~--~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHK--KR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcC--CC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 5678999999999999995555544 77 66 66544 77999999999 779999999999987542
Q ss_pred -------cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccc
Q 007858 141 -------LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATH 212 (587)
Q Consensus 141 -------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d 212 (587)
....|..|.||||+|+..|+.+++++|+++++ .+..+..+.. .+......+
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~---------------------~~~~~~~~~ 137 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFF---------------------QPKDEGGYF 137 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCC---------------------SSSCCCCSC
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccccc---------------------Ccccccccc
Confidence 13445588899999999999999999998887 4443321100 122223344
Q ss_pred cCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHH---HhhccchhhhhhhccCCChHHHHHH
Q 007858 213 AKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWK---EISKSTHKDVLKLISKPSKLLFDAA 289 (587)
Q Consensus 213 ~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~g~t~Lh~Aa 289 (587)
..|.||||+|+..++ .+++++|++ .|++++..+. .|.||||+|+
T Consensus 138 ~~g~tpL~~A~~~g~----------------------------~~~v~~Ll~~~~~ga~~~~~d~-----~g~TpLh~A~ 184 (260)
T 3jxi_A 138 YFGELPLSLAACTNQ----------------------------PHIVHYLTENGHKQADLRRQDS-----RGNTVLHALV 184 (260)
T ss_dssp CSCSSHHHHHHHTTC----------------------------HHHHHHHHHCSSCCCCTTCCCT-----TSCCHHHHHH
T ss_pred cCCCCHHHHHHHcCC----------------------------HHHHHHHHhccccCCCCcccCC-----CCCcHHHHHH
Confidence 679999999999887 899999999 8888876553 7899999999
Q ss_pred HcCc---------HHHHHHHHHhCCCcc-------ccccCCCCchHHHHHHcCChhHHHHHHhcCcchh
Q 007858 290 HSGN---------FKFLAVLTRSYPDLV-------HQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342 (587)
Q Consensus 290 ~~g~---------~~iv~~Ll~~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 342 (587)
..|+ .+++++|+++|++ + +..|.+|+||||+|+.+|+.+++++|+++|.+..
T Consensus 185 ~~~~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 185 AIADNTRENTKFVTKMYDLLLIKCAK-LFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHCCSSHHHHHHHHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhccCchhHHHHHHHHHHHHHHhCcc-cccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 8777 7899999999887 4 6789999999999999999999999999987754
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-31 Score=272.15 Aligned_cols=264 Identities=11% Similarity=0.046 Sum_probs=163.9
Q ss_pred ChHhHHHHH-cCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 43 CVPLYKAAL-KGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 43 ~t~L~~Aa~-~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
.++++.|.. .++.+.+++++ +. +.++.||||.|++.|+.++|++|++.+.+....+..|..|.||||+|
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~--~~--------g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A 135 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAH--KK--------GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 135 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHH--HH--------TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHH--Hc--------CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH
Confidence 445566555 45666666666 21 33456888888888888888888887722211234455677888888
Q ss_pred HHcCCHHHHHHHHhcCCcc--cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC--CCCCCchHHHHHH-HhCcHHH
Q 007858 122 AAVGSVEIAQFMLQRNPNL--LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNL--EPDDLENTFFVSI-ETGLYGL 195 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~--~~~~g~t~l~~a~-~~~~~~~ 195 (587)
++.|+.++|++|+++|++. .+..+.+ .||||+|+..|+.+++++|+++++ .+. .+.+|.||||.|+ ..|+.++
T Consensus 136 a~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ei 214 (376)
T 2aja_A 136 AENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNV 214 (376)
T ss_dssp HHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred HHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHH
Confidence 8888888888888888641 1222233 788888888888888888888877 443 6677788888888 8888888
Q ss_pred HHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhh
Q 007858 196 ALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL 275 (587)
Q Consensus 196 v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 275 (587)
+++|++. ++ .|.||||+|+..|+ .+++++|+++|++++..+
T Consensus 215 v~~Ll~~--ga-------~~~taL~~Aa~~g~----------------------------~evv~lL~~~ga~~~~~~-- 255 (376)
T 2aja_A 215 INFLLDC--PV-------MLAYAEIHEFEYGE----------------------------KYVNPFIARHVNRLKEMH-- 255 (376)
T ss_dssp HHHHTTS--HH-------HHHHHHHCTTTTTT----------------------------TTHHHHHHHHHHHHHHHH--
T ss_pred HHHHHhC--CC-------ccchHHHHHHHCCC----------------------------HHHHHHHHhcCccccccc--
Confidence 8888876 32 27788888888876 678888888877665432
Q ss_pred hhccCCChHHHHHHHcC---------------------------cHHHHHHHHHhCCCc----cccccCCCCchHHHHHH
Q 007858 276 KLISKPSKLLFDAAHSG---------------------------NFKFLAVLTRSYPDL----VHQLDENGRSIFHIAVM 324 (587)
Q Consensus 276 ~~~~~g~t~Lh~Aa~~g---------------------------~~~iv~~Ll~~~~~~----~~~~d~~g~t~Lh~A~~ 324 (587)
++++.|+..| ..+.+++|++....- .......+.||||+|+.
T Consensus 256 -------~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~ 328 (376)
T 2aja_A 256 -------DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR 328 (376)
T ss_dssp -------TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHH
T ss_pred -------HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHH
Confidence 1222333333 345555555432100 01223457799999999
Q ss_pred cCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCC
Q 007858 325 HRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISK 370 (587)
Q Consensus 325 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~ 370 (587)
.|+.+++++|++.|. .+|..|+|++.+|-..|..++.+.
T Consensus 329 ~g~~e~v~lLl~~~~-------v~~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 329 LGNQGACALLLSIPS-------VLALTKANNYYINETGGRLDLRAV 367 (376)
T ss_dssp HTCTTHHHHHTTSHH-------HHHSCC------------------
T ss_pred cCcHHHHHHHHcChH-------HHHHHHHhccccccccccccHHHH
Confidence 999999999998763 378899999999999998776544
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=223.13 Aligned_cols=169 Identities=15% Similarity=0.153 Sum_probs=150.7
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
+.||||.|+..|+.+.++.++ +..+..++.. +..|.||||+|+..|+.++|++|++.+ ++ ++.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHL-RKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEWG--AD-PHILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHH-TTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHT--CC-TTCCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHH-HcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-chhhcccCCCHHHHH
Confidence 468999999999999999999 5555556766 899999999999999999999999999 88 999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHH
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLL 200 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 200 (587)
+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.++ .+..+.+|.||||+|+..++.++++.|+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 9999999999999999996 8999999999999999999999999999999 8889999999999999999999999999
Q ss_pred HhcccccccccccCCchH
Q 007858 201 KKNKKLLAGATHAKYGTA 218 (587)
Q Consensus 201 ~~~~~~~~~~~d~~g~t~ 218 (587)
++ +.....++..|.||
T Consensus 156 ~~--~~~~~~~~~~~~~p 171 (172)
T 3v30_A 156 NH--ILKLFQSNLVPADP 171 (172)
T ss_dssp HH--HHHHSCC-------
T ss_pred HH--HHHHhcccCCCCCC
Confidence 98 77777778778776
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=220.85 Aligned_cols=147 Identities=24% Similarity=0.203 Sum_probs=103.7
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENF--DK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMW 107 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHH--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhc--cc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 666777777777777777777777766 56 6666677777777777777777777777777664 6666677777777
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
|+..|+.+++++|+++++ .+..+.+|.||||.|+..++.+++++|++. +..++.+|..|.||||+|+..++
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL--GADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCc
Confidence 777777777777777766 666666777777777777777777777765 66666677777777777777765
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=216.25 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=147.9
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
.|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll--~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRI--EQENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQNG--AD-PQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHH--HHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHH--HcCCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcC--CC-CCCcCCCCCcHHHH
Confidence 5789999999999999999999 556778877 899999999999999999999999998 88 89999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHH
Q 007858 121 AAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQL 199 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~L 199 (587)
|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||++.|+..|+.++++.|
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 99999999999999999996 8999999999999999999999999999998 888999999999999999999999999
Q ss_pred HHh
Q 007858 200 LKK 202 (587)
Q Consensus 200 l~~ 202 (587)
+++
T Consensus 155 ~~~ 157 (167)
T 3v31_A 155 ESH 157 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=222.15 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=151.3
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..|+||||.|+..|+.++++.|+ +.+.+++.. +..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.|
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll--~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t 103 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLV--ENFDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKG--SN-VNTKDFSGKT 103 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHH--HHHCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHT--CC-TTCCCTTSCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH--Hhccccccc-cccCccHHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCCc
Confidence 46788999999999999999999999 567788877 889999999999999999999999999 88 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
|||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 999999999999999999999996 8999999999999999999999999999998 88899999999999999999999
Q ss_pred HHHHHHh
Q 007858 196 ALQLLKK 202 (587)
Q Consensus 196 v~~Ll~~ 202 (587)
+++|++.
T Consensus 183 v~~Ll~~ 189 (192)
T 2rfm_A 183 IKIFTEV 189 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999987
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-28 Score=239.51 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=174.1
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcC-ccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCC-CccccCCCCCCcHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDH-QSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD-NLLSLQDENGNTAF 118 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~-~ll~~~d~~g~TpL 118 (587)
...+++|.|+..|+.+.++.++ +.. ...++.. |.+|.||||+|+..|+.++|++|++.| + + ++.+|..|.|||
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~-~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g--~~~-~~~~~~~g~tpL 149 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMS-ARLLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSG--VCK-VDKQNRAGYSPI 149 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHC-HHHHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTS--CCC-TTCCCTTSCCHH
T ss_pred HhccCCCHHHHHHHHHHHHHHH-HHHHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCC--CCc-CCCCCCCCCCHH
Confidence 3467789999999999999998 321 2236666 999999999999999999999999998 6 7 899999999999
Q ss_pred HHHH-----HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCc
Q 007858 119 CFAA-----AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGL 192 (587)
Q Consensus 119 h~Aa-----~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~ 192 (587)
|+|+ ..++.+++++|++.|.+. +..|..|.||||+|+..|+.+++++|++.++ ++..|.+|.||||+|+..|+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 9999 678999999999999874 8889999999999999999999999999999 88899999999999999999
Q ss_pred HHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 193 YGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 193 ~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
.++++.|++. .+.+++.+|..|.||||+|+..++ .+++++|+++.
T Consensus 229 ~~iv~~Ll~~-~gad~~~~d~~g~TpL~~A~~~g~----------------------------~~iv~~Ll~~~ 273 (276)
T 4hbd_A 229 KEIAGLLLAV-PSCDISLTDRDGSTALMVALDAGQ----------------------------SEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTS-TTCCTTCCCTTSCCHHHHHHHHTC----------------------------HHHHHHHHHHC
T ss_pred HHHHHHHHhc-CCCCCcCcCCCCCCHHHHHHHcCC----------------------------HHHHHHHHhcc
Confidence 9999999995 489999999999999999999998 89999999874
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-30 Score=261.43 Aligned_cols=280 Identities=10% Similarity=0.035 Sum_probs=202.7
Q ss_pred HcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHh-cCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHH
Q 007858 51 LKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATG-AKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEI 129 (587)
Q Consensus 51 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~-~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~i 129 (587)
..+..+.+..++ ....+++. ..+.++++.|.. .++.++++++++.+ .+ ++||||+|++.|+.++
T Consensus 43 ~~~~~~~~~~~~--~~~~~~~~---~~~ll~~~~a~~~~~~~~~~~~l~~~g--~~--------~~T~Lh~Aa~~G~~e~ 107 (376)
T 2aja_A 43 TLSYKEAIHIFL--PGTKNMEQ---VRQLLCLYYAHYNRNAKQLWSDAHKKG--IK--------SEVICFVAAITGCSSA 107 (376)
T ss_dssp HSCHHHHHHHCC--CCSSHHHH---HHHHHHHHHHHTTTTCTTHHHHHHHHT--CC--------HHHHHHHHHHHCCHHH
T ss_pred hccHHHHHHHHh--cCCCCHHH---HHHHHHHHHHHhcCCCHHHHHHHHHcC--CC--------cCCHHHHHHHcCCHHH
Confidence 345566666666 33344432 235678998887 57899999999987 44 3499999999999999
Q ss_pred HHHHHhcCCcc--cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC----CCCCCCCCchHHHHHHHhCcHHHHHHHHHhc
Q 007858 130 AQFMLQRNPNL--LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE----DNLEPDDLENTFFVSIETGLYGLALQLLKKN 203 (587)
Q Consensus 130 v~~Ll~~~~~l--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 203 (587)
|++|+++|+.. ....|..|.||||+|+..|+.+++++|+++++ .+..+.+ .||||.|+..|+.+++++|+++
T Consensus 108 v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~- 185 (376)
T 2aja_A 108 LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL- 185 (376)
T ss_dssp HHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS-
T ss_pred HHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc-
Confidence 99999998731 12345678899999999999999999999995 2334444 9999999999999999999998
Q ss_pred ccccccc--cccCCchHHHHHh-hCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccC
Q 007858 204 KKLLAGA--THAKYGTAMHMLA-RNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISK 280 (587)
Q Consensus 204 ~~~~~~~--~d~~g~t~Lh~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 280 (587)
+...+. .|..|.||||+|+ ..|+ .+++++|++.|..
T Consensus 186 -ga~~~~~~~d~~g~TpL~~Aa~~~G~----------------------------~eiv~~Ll~~ga~------------ 224 (376)
T 2aja_A 186 -APTEATAMIQAENYYAFRWAAVGRGH----------------------------HNVINFLLDCPVM------------ 224 (376)
T ss_dssp -CGGGHHHHHHHHHHHHHHHHHSTTCC----------------------------HHHHHHHTTSHHH------------
T ss_pred -CCccchhccCCCCCCHHHHHHHHCCC----------------------------HHHHHHHHhCCCc------------
Confidence 777666 8889999999999 9998 9999999987642
Q ss_pred CChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhH------------HHHHHhcCcch-------
Q 007858 281 PSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADT------------FKLIYEMGFDK------- 341 (587)
Q Consensus 281 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~i------------v~~Ll~~g~~~------- 341 (587)
|.||||.|+.+|+.+++++|++++++ ++..| ++++.|+.+|+.++ ++.|++.+...
T Consensus 225 ~~taL~~Aa~~g~~evv~lL~~~ga~-~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 299 (376)
T 2aja_A 225 LAYAEIHEFEYGEKYVNPFIARHVNR-LKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRF 299 (376)
T ss_dssp HHHHHHCTTTTTTTTHHHHHHHHHHH-HHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHH
T ss_pred cchHHHHHHHCCCHHHHHHHHhcCcc-ccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHH
Confidence 48999999999999999999999887 44443 36677777776653 23444443211
Q ss_pred -------hhhh--hhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhcccccccccCCCCCCchhhhH
Q 007858 342 -------ELIA--TYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTPWELFT 412 (587)
Q Consensus 342 -------~~~~--~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~g~t~l~~a~ 412 (587)
..+. ...++.++||||+|+..|+.++++.| +.. ...++..|+|+++++.
T Consensus 300 Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lL-------------------l~~---~~v~~~~~~~~~~~~~ 357 (376)
T 2aja_A 300 LLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL-------------------LSI---PSVLALTKANNYYINE 357 (376)
T ss_dssp HHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHH-------------------TTS---HHHHHSCC--------
T ss_pred HHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHH-------------------HcC---hHHHHHHHHhcccccc
Confidence 0000 12446788999999999998877665 222 3667889999998886
Q ss_pred Hhh
Q 007858 413 DEH 415 (587)
Q Consensus 413 ~~~ 415 (587)
.+.
T Consensus 358 ~~~ 360 (376)
T 2aja_A 358 TGG 360 (376)
T ss_dssp ---
T ss_pred ccc
Confidence 543
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-30 Score=243.36 Aligned_cols=189 Identities=16% Similarity=0.072 Sum_probs=137.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
+.+|.||||.|+..|+.++|++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~ 93 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEM--ND-PSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHC 93 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHS--SC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcC--CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHH
Confidence 455677788888888888888888877 67 7778888888888888888888888888888875 7778888888888
Q ss_pred HHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccc-cCCchHHHHHhhCCCCcccCC
Q 007858 155 AALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATH-AKYGTAMHMLARNPSAFTSNC 233 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d-~~g~t~Lh~a~~~~~~~~~~~ 233 (587)
|+..|+.+++++|++.++ .++.++ ..|.||||+|+.
T Consensus 94 A~~~g~~~~v~~Ll~~ga----------------------------------~~~~~~~~~g~tpL~~A~a--------- 130 (229)
T 2vge_A 94 AASCNDTVICMALVQHGA----------------------------------AIFATTLSDGATAFEKCDP--------- 130 (229)
T ss_dssp HHHTTCHHHHHHHHTTTC----------------------------------CTTCCCSSTTCCTGGGCCT---------
T ss_pred HHHcCCHHHHHHHHHcCC----------------------------------CcccccCCCCCCHHHHHHH---------
Confidence 888888888888877765 222332 456666665510
Q ss_pred CCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccC
Q 007858 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDE 313 (587)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~ 313 (587)
+..|+.+++++|+++|++ ++..|.
T Consensus 131 -------------------------------------------------------~~~~~~~~v~~Ll~~ga~-~~~~~~ 154 (229)
T 2vge_A 131 -------------------------------------------------------YREGYADCATYLADVEQS-MGLMNS 154 (229)
T ss_dssp -------------------------------------------------------TSTTHHHHHHHHHHHHHH-TTTSGG
T ss_pred -------------------------------------------------------HhcChHHHHHHHHHcCCC-cccccC
Confidence 334456666666666666 566777
Q ss_pred CCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 314 NGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 314 ~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
.|.||+|.++..+. .++|++.|++++ ++.+|.+|+||||+|+..|+.++++..
T Consensus 155 ~~~~~l~~~~~~~~---~~~ll~~ga~~~--~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 155 GAVYALWDYSAEFG---DELSFREGESVT--VLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp GEEEESSCBCCSST---TBCCBCTTCEEE--EEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred CchHHHHHHhhccc---cccCcccccccc--ccccCCCcccHHHHHHHcCCcceeehh
Confidence 77888876544433 356788888865 567899999999999999998877654
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=215.03 Aligned_cols=164 Identities=16% Similarity=0.175 Sum_probs=151.8
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
+.||||.|+..|+.+++++|++.+ .+.++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKG--DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTC--SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcC--cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHH
Confidence 578999999999999999999998 5548899999999999999999999999999999996 8999999999999999
Q ss_pred hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCC
Q 007858 158 FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGW 236 (587)
Q Consensus 158 ~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~ 236 (587)
.|+.+++++|+++++ .+..+.+|.||||.|+..++.++++.|++. +..++.+|..|.||||+|+..++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~--------- 147 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR--GADLTTEADSGYTPMDLAVALGY--------- 147 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTC---------
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHhCc---------
Confidence 999999999999998 888999999999999999999999999998 88899999999999999999997
Q ss_pred ccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhh
Q 007858 237 LKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDV 274 (587)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 274 (587)
.+++++|++++.+....+.
T Consensus 148 -------------------~~~~~~L~~~~~~~~~~~~ 166 (172)
T 3v30_A 148 -------------------RKVQQVIENHILKLFQSNL 166 (172)
T ss_dssp -------------------HHHHHHHHHHHHHHSCC--
T ss_pred -------------------HHHHHHHHHHHHHHhcccC
Confidence 9999999999987765543
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=212.59 Aligned_cols=154 Identities=18% Similarity=0.174 Sum_probs=146.0
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
...||||.|+..|+.++++.|+ +.+.+++.. +..|.||||+|+. |+.+++++|++.+ .+ ++.+|..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll--~~~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLL--QNNVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLRG--AN-PDLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHT--TSCCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHTT--CC-TTCCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHH--hCCCCcccc-CccCccHHHHHHc-CcHHHHHHHHHcC--CC-CCCCCCCCCCHHHH
Confidence 4579999999999999999999 678888877 8999999999999 9999999999998 88 99999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC--CCCCCCCCchHHHHHHHhCcHHHHHH
Q 007858 121 AAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE--DNLEPDDLENTFFVSIETGLYGLALQ 198 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~v~~ 198 (587)
|++.|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|+++++ .+..+..|.||||+|+..++.+++++
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999999999999996 8999999999999999999999999999998 47899999999999999999999999
Q ss_pred HHHh
Q 007858 199 LLKK 202 (587)
Q Consensus 199 Ll~~ 202 (587)
|+++
T Consensus 156 Ll~~ 159 (162)
T 1ihb_A 156 MQAN 159 (162)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9997
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=213.55 Aligned_cols=158 Identities=24% Similarity=0.282 Sum_probs=148.0
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
....+.++|+.|+..|+.+++++|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~ 83 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILM--ANGADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKNG--AD-VNAVDHAGMTP 83 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCccCCCCCCH
Confidence 4556789999999999999999999 678888877 899999999999999999999999998 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.+++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999999996 8999999999999999999999999999998 888999999999999999999999
Q ss_pred HHHHHh
Q 007858 197 LQLLKK 202 (587)
Q Consensus 197 ~~Ll~~ 202 (587)
++|++.
T Consensus 163 ~~L~~~ 168 (169)
T 2y1l_E 163 EILQKL 168 (169)
T ss_dssp HHHHTC
T ss_pred HHHHHc
Confidence 999875
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=212.25 Aligned_cols=160 Identities=15% Similarity=0.156 Sum_probs=152.3
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
.|.||||.|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE--NV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS--SC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC--CC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 5899999999999999999999998 88 9999999999999999999999999999999995 889999999999999
Q ss_pred HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCC
Q 007858 157 LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPG 235 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~ 235 (587)
..|+.+++++|+++++ .+..+.+|.||||.|+..++.++++.|+++ +..++.+|..|.||||+|+..++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~-------- 147 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES--GADPTIETDSGYNSMDLAVALGY-------- 147 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTC--------
T ss_pred HcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCc--------
Confidence 9999999999999998 888999999999999999999999999997 88889999999999999999997
Q ss_pred CccccchhhhhccCCCchHHHHHHHHHHHHhhccc
Q 007858 236 WLKVPGIKFITNNTDSSTQALELVKCLWKEISKST 270 (587)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 270 (587)
.+++++|++++.+..
T Consensus 148 --------------------~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 148 --------------------RSVQQVIESHLLKLL 162 (167)
T ss_dssp --------------------HHHHHHHHHHHHHHC
T ss_pred --------------------HHHHHHHHHHHHHHH
Confidence 999999999887653
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-28 Score=236.96 Aligned_cols=193 Identities=16% Similarity=0.205 Sum_probs=147.4
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
.+.+++|.|+..|+.+.++.+++.+.... ++.+|.+|+||||+|+..|+.+++++|++.|+..++..|..|.||||+|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~-~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYV-VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHH-HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhc-CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 45778888888888888888877652222 67788888888888888888888888888887224888888888888888
Q ss_pred -----HhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCccc
Q 007858 157 -----LFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTS 231 (587)
Q Consensus 157 -----~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~ 231 (587)
..++.+++++|++.+. .....|..|.||||+|+..++
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~----------------------------------~~~~~~~~g~tpLh~A~~~g~---- 195 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGN----------------------------------INAKASQAGQTALMLAVSHGR---- 195 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSC----------------------------------TTCCCTTTCCCHHHHHHHTTC----
T ss_pred HHHhhhhhhHHHHHHHHHcCC----------------------------------CccccCCCCCCHHHHHHHcCC----
Confidence 4455555555555543 444556667777777777665
Q ss_pred CCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHH-hCCCcccc
Q 007858 232 NCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTR-SYPDLVHQ 310 (587)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~-~~~~~~~~ 310 (587)
.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++ .+++ ++.
T Consensus 196 ------------------------~~~v~~Ll~~gad~n~~d-----~~G~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~ 245 (276)
T 4hbd_A 196 ------------------------VDVVKALLACEADVNVQD-----DDGSTALMCACEHGHKEIAGLLLAVPSCD-ISL 245 (276)
T ss_dssp ------------------------HHHHHHHHHTTCCTTCCC-----TTSCCHHHHHHHHTCHHHHHHHHTSTTCC-TTC
T ss_pred ------------------------HHHHHHHHhCCCCCCCCC-----CCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CcC
Confidence 677777777777666544 367888888888888999999998 7888 688
Q ss_pred ccCCCCchHHHHHHcCChhHHHHHHhcC
Q 007858 311 LDENGRSIFHIAVMHRHADTFKLIYEMG 338 (587)
Q Consensus 311 ~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 338 (587)
+|.+|+||||+|+.+|+.+++++|++++
T Consensus 246 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999998875
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=215.78 Aligned_cols=168 Identities=16% Similarity=0.111 Sum_probs=153.4
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
.++.++||.|+..|+.+.++.|+ +..+.+++.. +..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~ 77 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWL-DNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMRG--AR-INVMNRGDDTPLH 77 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHH-HCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH-hcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHcC--CC-CCCcCCCCCCHHH
Confidence 45688999999999999999999 7667888877 899999999999999999999999998 88 9999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQ 198 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~ 198 (587)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||++.|+..++.++++.
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~ 156 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRER 156 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999996 9999999999999999999999999999999 88899999999999999999999999
Q ss_pred HHHhcccccccccccCC
Q 007858 199 LLKKNKKLLAGATHAKY 215 (587)
Q Consensus 199 Ll~~~~~~~~~~~d~~g 215 (587)
|++. +..++..+..+
T Consensus 157 L~~~--g~~~~~~~~~~ 171 (179)
T 3f6q_A 157 AEKM--GQNLNRIPYKD 171 (179)
T ss_dssp HHHT--TCCCSCBCCCC
T ss_pred HHHh--hcCcccCCccc
Confidence 9998 76666555443
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=208.81 Aligned_cols=153 Identities=19% Similarity=0.219 Sum_probs=144.0
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
+.|+||.|+..|+.+.++.|+ +..+.+++.. +..|.||||+ +..|+.+++++|++.| ++ ++.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLL-HRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQG--AS-PNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH-HTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHH-HhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHCC--CC-CCCcCCCCCCHHHHH
Confidence 468999999999999999999 5555577776 8999999999 9999999999999998 88 999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHH
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLL 200 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 200 (587)
+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++. + .+..+.+|.||||.|+..|+.++++.|+
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 9999999999999999996 99999999999999999999999999999 6 8889999999999999999999999998
Q ss_pred Hh
Q 007858 201 KK 202 (587)
Q Consensus 201 ~~ 202 (587)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 75
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-27 Score=210.35 Aligned_cols=159 Identities=18% Similarity=0.146 Sum_probs=146.7
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHH
Q 007858 76 KGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 76 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A 155 (587)
....||||.|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+. |+.+++++|+++|+++ +.+|..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~--~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNN--VN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA 77 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSC--CC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCC--CC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 34679999999999999999999998 88 89999999999999999 9999999999999996 89999999999999
Q ss_pred HHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCC
Q 007858 156 ALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCP 234 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~ 234 (587)
+..|+.+++++|+++++ .+..+.+|.||||.|+..++.+++++|+++ .....+.+|..|.||||+|+..++
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~l~~A~~~~~------- 149 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDTACDLARLYGR------- 149 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTTC-------
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-cCCCCCCcCCCCCcHHHHHHHcCC-------
Confidence 99999999999999998 888999999999999999999999999998 333468899999999999999998
Q ss_pred CCccccchhhhhccCCCchHHHHHHHHHHHHhhc
Q 007858 235 GWLKVPGIKFITNNTDSSTQALELVKCLWKEISK 268 (587)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~ 268 (587)
.+++++|+++|++
T Consensus 150 ---------------------~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 150 ---------------------NEVVSLMQANGAG 162 (162)
T ss_dssp ---------------------HHHHHHHHHTC--
T ss_pred ---------------------HHHHHHHHHhCCC
Confidence 8999999998864
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=213.65 Aligned_cols=158 Identities=19% Similarity=0.225 Sum_probs=146.1
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+.++.|+||.|+..|+.+.++.|+ +..+.+++.. +..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~ 78 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLC-TVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHG--AD-VHAKDKGGLVP 78 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHC-CTTTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHH-HcCCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhcC--CC-CCccCCCCCCH
Confidence 3567899999999999999999999 6566666665 788999999999999999999999998 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHH
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLA 196 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v 196 (587)
||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||+|+|.. ++.+++
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred HHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHH
Confidence 99999999999999999999996 8999999999999999999999999999998 88899999999999877 888999
Q ss_pred HHHHHh
Q 007858 197 LQLLKK 202 (587)
Q Consensus 197 ~~Ll~~ 202 (587)
++|+++
T Consensus 157 ~~L~~~ 162 (165)
T 3twr_A 157 DLLRGD 162 (165)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 999876
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-29 Score=239.63 Aligned_cols=129 Identities=18% Similarity=0.170 Sum_probs=118.0
Q ss_pred cccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc
Q 007858 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 37 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
..+..+.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.++|++|++.| ++ ++.+|..|.|
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~-~n~~d~~g~t 89 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAV--KEMNDPSQP-NEEGITALHNAICGANYSIVDFLITAG--AN-VNSPDSHGWT 89 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHH--HHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCC
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHH--hcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCCC
Confidence 45667889999999999999999999 567788877 999999999999999999999999999 88 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCC-CCCCcHHHHH--HHhCChHHHHHHhhcCC
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRG-GGQMTPLYIA--ALFGQSKMASFLYRQNE 172 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~-~~g~tpL~~A--~~~g~~~~v~~Ll~~~~ 172 (587)
|||+|+..|+.+++++|+++|+++ +.++ .+|.||||+| +..|+.+++++|++.++
T Consensus 90 pLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 90 PLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQ 147 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence 999999999999999999999997 6664 7999999999 88888888888887764
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=206.84 Aligned_cols=150 Identities=17% Similarity=0.180 Sum_probs=139.9
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
..++||.|+..|+.++++.|+ +.+.+++ . +..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll--~~g~~~~-~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILM--ANGAPFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRAG--VS-RDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH--HHTCCCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTTT--CC-TTCCCTTCCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHH--HcCCCCC-c-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCCCCCCCCCHHHHH
Confidence 358999999999999999999 4455554 3 788999999999999999999999998 88 899999999999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHH
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQL 199 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~L 199 (587)
+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+.+|.||++.|+..|+.+++++|
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999996 8999999999999999999999999999998 888999999999999999999999876
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=209.82 Aligned_cols=158 Identities=22% Similarity=0.242 Sum_probs=148.4
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
...+.|+||.|++.|+.++|++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANG--AD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRL 86 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCC--CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHH
Confidence 566789999999999999999999998 88 9999999999999999999999999999999996 8999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNC 233 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~ 233 (587)
|+..|+.+++++|+++++ .+..+.+|.||||.|+..++.+++++|+++ +..++.+|..|.||||+|+..++
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~------ 158 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN--GADVNAQDKFGKTAFDISIDNGN------ 158 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTC------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhCC------
Confidence 999999999999999998 888999999999999999999999999998 88889999999999999999997
Q ss_pred CCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
.+++++|++.|
T Consensus 159 ----------------------~~~~~~L~~~G 169 (169)
T 2y1l_E 159 ----------------------EDLAEILQKLN 169 (169)
T ss_dssp ----------------------HHHHHHHHTC-
T ss_pred ----------------------HHHHHHHHHcC
Confidence 89999998754
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=207.50 Aligned_cols=159 Identities=17% Similarity=0.225 Sum_probs=146.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
|++|.||||.|++.|+.+++++|++.+ +.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 81 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVN-CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHN 81 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCC-ccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHH
Confidence 677899999999999999999999976 356 8888999999999999999999999999999996 9999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNC 233 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~ 233 (587)
|+..|+.+++++|+++++ .+..+.+|.||||.|+..++.+++++|+++ +..++.+|..|.||||+|+. ++
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~a~~-~~------ 152 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH--GADPTKKNRDGNTPLDLVKD-GD------ 152 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCTGGGSCT-TC------
T ss_pred HHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCChhHhHhc-CC------
Confidence 999999999999999999 888999999999999999999999999998 88999999999999999877 54
Q ss_pred CCCccccchhhhhccCCCchHHHHHHHHHHHHhh
Q 007858 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS 267 (587)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~ 267 (587)
.+++++|+++|+
T Consensus 153 ----------------------~~i~~~L~~~gA 164 (165)
T 3twr_A 153 ----------------------TDIQDLLRGDAA 164 (165)
T ss_dssp ----------------------HHHHHHHHTC--
T ss_pred ----------------------hHHHHHHhhccc
Confidence 899999987664
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-26 Score=200.63 Aligned_cols=143 Identities=18% Similarity=0.136 Sum_probs=135.7
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
..||||.|++.|+.+++++|++.+ .+ ++ .|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g--~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANG--AP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT--CC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcC--CC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 468999999999999999999998 66 54 5889999999999999999999999999996 8999999999999999
Q ss_pred hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 158 FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 158 ~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.|+.+++++|+++++ .+..+.+|.||||.|+..++.+++++|+++ +..++.+|..|.||||+|+..++
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY--GADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCC
Confidence 999999999999998 888999999999999999999999999998 88899999999999999999997
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=209.15 Aligned_cols=166 Identities=14% Similarity=0.124 Sum_probs=151.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
++++.++||.|+..|+.++|++|++.+ +.+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNT-END-LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHL 78 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCT-TSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcC-ccc-ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHH
Confidence 356789999999999999999999996 356 8999999999999999999999999999999996 8999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNC 233 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~ 233 (587)
|+..|+.+++++|+++++ .+..+.+|.||||.|+..++.++++.|+++ +..++.+|..|.||||+|+..++
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpl~~A~~~~~------ 150 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN--GALVSICNKYGEMPVDKAKAPLR------ 150 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSSBCCTTSCCGGGGSCHHHH------
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcchhccCCCCcHHHHHHHHH------
Confidence 999999999999999999 888999999999999999999999999998 89999999999999999998775
Q ss_pred CCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhh
Q 007858 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKD 273 (587)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 273 (587)
.++++.|++.|.+++...
T Consensus 151 ----------------------~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 151 ----------------------ELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp ----------------------HHHHHHHHHTTCCCSCBC
T ss_pred ----------------------HHHHHHHHHhhcCcccCC
Confidence 889999999998887544
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=222.85 Aligned_cols=179 Identities=16% Similarity=0.103 Sum_probs=131.8
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
+..|.||||.|+..|+.+.++.|+ +++.+++. ++.|.||||.|+..|+.++|++|++.+ ++ ++.+|..|.|||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll--~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~d~~g~t~L 74 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERI--AHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEV--DD-PSLPNDEGITAL 74 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT--SS-CCCCCTTSCCHH
T ss_pred CccccccCchhhhhhhHHHHHHHh--ccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcC--CC-CCCcCCCCCCHH
Confidence 356899999999999999999999 77888874 578999999999999999999999998 78 999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCc-hHHHHH--HHhCcHH
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLE-NTFFVS--IETGLYG 194 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~-t~l~~a--~~~~~~~ 194 (587)
|+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|. ||+|.| +..|+.+
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ 153 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHH
Confidence 9999999999999999999996 9999999999999999999999999999999 777777776 999999 7889999
Q ss_pred HHHHHHHhccccccccc---------ccCCchHHHHHhhCCC
Q 007858 195 LALQLLKKNKKLLAGAT---------HAKYGTAMHMLARNPS 227 (587)
Q Consensus 195 ~v~~Ll~~~~~~~~~~~---------d~~g~t~Lh~a~~~~~ 227 (587)
+++.|++. ++..+.. +..+.++++++...|.
T Consensus 154 ~~~~Ll~~--~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 154 CSQFLYGV--QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHH--HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHHh--hhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999998 5555443 6678888888888775
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=198.03 Aligned_cols=143 Identities=15% Similarity=0.099 Sum_probs=135.0
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
+.||||.|+..|+.+++++|++.. +.+ ++.+|..|.||||+ +..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~-~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-LVH-PDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-CCC-TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-CcC-ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 579999999999999999999983 467 89999999999999 9999999999999999996 9999999999999999
Q ss_pred hCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 158 FGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 158 ~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.|+.+++++|+++++ .+..+.+|.||||.|+..|+.+++++|++. ...+.+|..|.||||+|+..++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE---SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT---SCTTCCCTTSCCHHHHHHHSCC
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc---cCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999998 888999999999999999999999999985 6777899999999999999998
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=214.51 Aligned_cols=146 Identities=11% Similarity=0.000 Sum_probs=97.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
+..|.||||.|++.|+.+.++.|+++| .+ ++. +..|.||||.|+..|+.+++++|++.|+++ +.+|..|.||||+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHG--MR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHN 76 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccC--CC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHH
Confidence 356899999999999999999999999 66 654 477899999999999999999999999985 9999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCc-hHHHHH--hhCCC
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYG-TAMHML--ARNPS 227 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~-t~Lh~a--~~~~~ 227 (587)
|+..|+.+++++|+++++ .+..|.+|.||||.|+..|+.++++.|+++ +..++.++..|. ||||+| +..++
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES--GAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcceecCCCCcchHHHHHHhhhcc
Confidence 999999999999999988 777888888888888888888888888887 777777777666 888877 45554
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-25 Score=202.93 Aligned_cols=154 Identities=8% Similarity=-0.002 Sum_probs=137.5
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCH----HHHHHHHHccCCCCccccCCCCCCc
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQT----NFVKQMVELTGHDNLLSLQDENGNT 116 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~----~iv~~Ll~~~~~~~ll~~~d~~g~T 116 (587)
+++++|+.|++.|+.+.++.++ ... ++...+..|.||||+|+..|+. +++++|+++| ++ ++.+|..|+|
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~-~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--ad-vn~~d~~g~T 77 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELF-EKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG--AD-IKSRTKEGTT 77 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHH-HHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CC-SSCCCTTCCC
T ss_pred ccccHHHHHHHcCCHHHHHHHH-hcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CC-CCCCCCCCCc
Confidence 4578899999999999999999 433 3334236799999999999975 5999999999 99 9999999999
Q ss_pred HHHHHHHcCC------HHHHHHHHhcCCcccccCCCCCC-cHHHHHHHhCC-----hHHHHHHhh-cCC-CCCCCCCCch
Q 007858 117 AFCFAAAVGS------VEIAQFMLQRNPNLLTIRGGGQM-TPLYIAALFGQ-----SKMASFLYR-QNE-DNLEPDDLEN 182 (587)
Q Consensus 117 pLh~Aa~~g~------~~iv~~Ll~~~~~l~~~~~~~g~-tpL~~A~~~g~-----~~~v~~Ll~-~~~-~~~~~~~g~t 182 (587)
|||+|+..|+ .+++++|+++|+++ +.+|..|. ||||+|+..+. .+++++|++ +++ .+..|..|.|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 9999999987 68899999999996 99999999 99999999543 569999999 888 8999999999
Q ss_pred HHHHHHHhCcHHHHHHHHHh
Q 007858 183 TFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 183 ~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|||+|++.++.++++.|.+.
T Consensus 157 pL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999986
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=188.20 Aligned_cols=127 Identities=13% Similarity=0.093 Sum_probs=107.6
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCC-CCc
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDEN-GNT 116 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~-g~T 116 (587)
.+..|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+. |+.+++++|++.+ ++ ++.+|.. |.|
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLL--EAGADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHG--AE-PNCADPATLTR 80 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHT--CC-SSCCBTTTTBC
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHH--HcCCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCC--CC-CCCcCCCCCCC
Confidence 4667888888888888888888888 567777776 7888888888888 8888888888888 77 8888888 888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 888888888888888888888885 8888888888888888888888888888764
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=193.59 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=110.1
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCc-
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNT- 116 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~T- 116 (587)
.+..|.||||.|+..|+.+++++|+ +.+.+++.. +..|.||||+|+ .|+.+++++|++.+ ++ ++.+|..|.|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g--~~-~~~~d~~g~tt 80 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALL--EAGANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHG--AE-PNCADPATLTR 80 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHH--TTTCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTT--CC-CCCCCTTTCCC
T ss_pred CCccchHHHHHHHHcCCHHHHHHHH--HcCCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcC--CC-CCCcCCCCCcH
Confidence 4567889999999999999999998 567888877 888999999985 88999999999988 88 8889999998
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHH
Q 007858 117 AFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFF 185 (587)
Q Consensus 117 pLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~ 185 (587)
|||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++++ .+..+..|.|+.+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 999999999999999999999985 8888999999999999999999999998887 6667777776655
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=184.98 Aligned_cols=127 Identities=22% Similarity=0.236 Sum_probs=110.1
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
....+.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILM--ANGADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNG--AD-VNAVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHH--HcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCcCCCCCCCH
Confidence 4566788999999999999999998 567788776 888999999999999999999999988 78 88889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN 171 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (587)
||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999885 888889999999999999999999988764
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-24 Score=184.14 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=122.5
Q ss_pred cchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCC
Q 007858 68 SMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGG 147 (587)
Q Consensus 68 ~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~ 147 (587)
.+++.. +..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+. |+.+++++|+++|+++ +.+|..
T Consensus 3 ~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~ 76 (136)
T 1d9s_A 3 PGIHML-GGSSDAGLATAAARGQVETVRQLLEAG--AD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPA 76 (136)
T ss_dssp CCCSCC-CCCCSCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTT
T ss_pred CCccCC-CCCCccHHHHHHHcCCHHHHHHHHHcC--CC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCC
Confidence 355655 889999999999999999999999998 88 99999999999999999 9999999999999996 899999
Q ss_pred -CCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 148 -QMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 148 -g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++.+++++|+++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999999999 888999999999999999999999999987
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-24 Score=190.30 Aligned_cols=141 Identities=16% Similarity=0.062 Sum_probs=118.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCc-HHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMT-PLY 153 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~t-pL~ 153 (587)
+..|.||||+|+..|+.++|++|++.+ .+ ++.+|..|.||||+|+ .|+.+++++|+++|+++ +.+|..|.| |||
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAG--AN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVH 83 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTT--CC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcC--CC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHH
Confidence 678999999999999999999999998 88 9999999999999985 89999999999999996 999999999 999
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHH
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHML 222 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a 222 (587)
+|+..|+.+++++|+++++ .+..+.+|.||||+|+..++.+++++|+++ ++.++.++..|.||.+.+
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA--AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC--C-----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc--CCCCCccCcCcCcccccC
Confidence 9999999999999999999 888999999999999999999999999997 999999999999998754
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=177.19 Aligned_cols=125 Identities=26% Similarity=0.369 Sum_probs=107.0
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
+|.||||.|+..|+.+++++|+ +.+.+++.. +..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll--~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~-~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLL--EAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAG--AD-VNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHH--HHTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHH--HcCCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcC--CC-CcccCCCCCcHHHH
Confidence 4788899999999999888888 456677766 788889999999989999999988887 77 88888888899999
Q ss_pred HHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 121 AAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99888999999998888885 7888888899999988888888888888875
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=195.29 Aligned_cols=159 Identities=10% Similarity=0.007 Sum_probs=141.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCC-CCCCcHHHHHHHcCCH----HHHHHHHhcCCcccccCCCCCCcHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFCFAAAVGSV----EIAQFMLQRNPNLLTIRGGGQMTPL 152 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~~g~~----~iv~~Ll~~~~~l~~~~~~~g~tpL 152 (587)
+.++||.|++.|+.+.++.+++.+ ++.++ ..|+||||+|+.+|+. +++++|+++|+++ +.+|.+|+|||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~-----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpL 79 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG-----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLF 79 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS-----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC-----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence 468999999999999999999887 44555 7799999999999985 5999999999996 99999999999
Q ss_pred HHHHHhCC------hHHHHHHhhcCC-CCCCCCCCc-hHHHHHHHh-----CcHHHHHHHHHhcccccccccccCCchHH
Q 007858 153 YIAALFGQ------SKMASFLYRQNE-DNLEPDDLE-NTFFVSIET-----GLYGLALQLLKKNKKLLAGATHAKYGTAM 219 (587)
Q Consensus 153 ~~A~~~g~------~~~v~~Ll~~~~-~~~~~~~g~-t~l~~a~~~-----~~~~~v~~Ll~~~~~~~~~~~d~~g~t~L 219 (587)
|+|+..++ .+++++|+++|+ ++..|.+|. ||||+|+.. +..++++.|++. .+++++.+|..|+|||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-SGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-TTCCTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-cCCCCcccCCCCCCHH
Confidence 99999997 578999999999 999999999 999999983 456799999993 3999999999999999
Q ss_pred HHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccch
Q 007858 220 HMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTH 271 (587)
Q Consensus 220 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~ 271 (587)
|+|++.++ .+++++|.+...+.+.
T Consensus 159 ~~A~~~~~----------------------------~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 159 EFVKRCQK----------------------------PIALKMMEDYIKKYNL 182 (186)
T ss_dssp HHHHTTTC----------------------------HHHHHHHHHHHHHHTC
T ss_pred HHHHHcCC----------------------------HHHHHHHHHHHHHHhc
Confidence 99999997 8999999887765543
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-23 Score=198.08 Aligned_cols=165 Identities=19% Similarity=0.178 Sum_probs=142.4
Q ss_pred cccceeecCCCCCCCCCCcCCCCcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHH
Q 007858 14 QEISISITGRDPANSVQPLQNDKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNF 93 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~i 93 (587)
.++.++....+..............+..|.||||.|+..|+.++++.|+ + +.+++.. |..|.||||+|+..|+.++
T Consensus 17 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~--~~~~~~~-d~~g~t~L~~A~~~g~~~~ 92 (244)
T 3ui2_A 17 MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL-E--DRDVDAV-DENGRTALLFVAGLGSDKC 92 (244)
T ss_dssp EEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTT-T--TCCTTCB-CTTSCBHHHHHHHHTCHHH
T ss_pred cHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHH-c--CCCCCCc-CCCCCCHHHHHHHCCCHHH
Confidence 4444555555555444444455566778999999999999999999999 4 7888887 9999999999999999999
Q ss_pred HHHHHHccCCCCccccCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 94 VKQMVELTGHDNLLSLQD-ENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 94 v~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
|++|++++ ++ ++.+| ..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..++
T Consensus 93 v~~Ll~~g--a~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------ 156 (244)
T 3ui2_A 93 VRLLAEAG--AD-LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------ 156 (244)
T ss_dssp HHHHHHTT--CC-TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------
T ss_pred HHHHHHcC--CC-CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------
Confidence 99999999 88 88888 88999999999999999999999999996 8999999999999997432
Q ss_pred CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 173 DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 173 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
...+.+||++|+..|+.++++.|++.
T Consensus 157 ----~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 157 ----TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp ----TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ----ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 24678999999999999999999986
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=176.39 Aligned_cols=124 Identities=26% Similarity=0.299 Sum_probs=118.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
...+.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~ 86 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--AD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHL 86 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--CC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence 566899999999999999999999998 88 9999999999999999999999999999999996 8999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
|+..|+.+++++|+++++ .+..|.+|.||||.|+..++.++++.|++.
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999998 888999999999999999999999999985
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-23 Score=188.37 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=130.3
Q ss_pred CCcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCC-CC
Q 007858 35 DKKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQD-EN 113 (587)
Q Consensus 35 ~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~ 113 (587)
....+..|.||||.|+..|+.++++.|+ + +.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+| ..
T Consensus 37 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~--~~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~-~~~~~~~~ 109 (183)
T 3deo_A 37 AADVVSEYETPWWTAARKADEQALSQLL-E--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAG--AD-LDHRDMRG 109 (183)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHT-T--TSCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCSSS
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHH-h--cCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCcCCCCC
Confidence 3445678999999999999999999999 4 7888887 999999999999999999999999999 88 88888 88
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcH
Q 007858 114 GNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLY 193 (587)
Q Consensus 114 g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~ 193 (587)
|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..++. ..+.++++.|+..|..
T Consensus 110 g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 110 GLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLE 172 (183)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHH
Confidence 999999999999999999999999996 99999999999999986533 3467899999999999
Q ss_pred HHHHHHHHh
Q 007858 194 GLALQLLKK 202 (587)
Q Consensus 194 ~~v~~Ll~~ 202 (587)
++++.|.++
T Consensus 173 ~i~~~L~~~ 181 (183)
T 3deo_A 173 KVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998764
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=170.16 Aligned_cols=122 Identities=22% Similarity=0.346 Sum_probs=117.7
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
+|.||||.|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--AD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT--CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC--CC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHH
Confidence 5899999999999999999999998 88 8999999999999999999999999999999996 899999999999999
Q ss_pred HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 157 LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
..|+.+++++|+++++ .+..+.+|.||++.|+..++.+++++|+++
T Consensus 77 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 9999999999999998 888999999999999999999999999997
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-23 Score=202.44 Aligned_cols=172 Identities=17% Similarity=0.179 Sum_probs=146.7
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHH
Q 007858 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFC 119 (587)
Q Consensus 40 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh 119 (587)
..+.+++..++..|+.+.+..+. ..+.++ +.+|.||||.|+..|+.++|+.|++ + .+ ++.+|..|.||||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~--~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~-~~~~d~~g~t~L~ 82 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSS--YIAADV----VSEYETPWWTAARKADEQALSQLLE-D--RD-VDAVDENGRTALL 82 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGG--GSCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT-T--CC-TTCBCTTSCBHHH
T ss_pred CCCccHHHHHHHcCCCccccccc--cccccc----ccCCCCHHHHHHHcCCHHHHHHHHc-C--CC-CCCcCCCCCCHHH
Confidence 44566666777777776665544 333333 4569999999999999999999999 7 78 9999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCC-CCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHH
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRG-GGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLAL 197 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~ 197 (587)
+|+..|+.++|++|+++|+++ +.++ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||||+|+..+
T Consensus 83 ~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~------ 155 (244)
T 3ui2_A 83 FVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL------ 155 (244)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH------
T ss_pred HHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH------
Confidence 999999999999999999996 7777 889999999999999999999999999 8889999999999998642
Q ss_pred HHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhcc
Q 007858 198 QLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKS 269 (587)
Q Consensus 198 ~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~ 269 (587)
....+.||||+|+..|+ .+++++|.+.+.+.
T Consensus 156 -------------~~~~~~~~l~~a~~~g~----------------------------~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 156 -------------KTTPKGNPMQFGRRIGL----------------------------EKVINVLEGQVFEY 186 (244)
T ss_dssp -------------TTCCCSSHHHHHHHHHH----------------------------HHHHHHHHHHHEEE
T ss_pred -------------hccCCCCHHHHHHHcCh----------------------------HHHHHHHHHhcccc
Confidence 23578999999999986 89999999886543
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-23 Score=179.44 Aligned_cols=127 Identities=15% Similarity=0.105 Sum_probs=89.8
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+..|+||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~-~~~~~~~g~t~ 79 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLL--QNGSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQHK--AL-VNTTGYQNDSP 79 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHH--HTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCGGGCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH--HcCCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--Cc-ccCcCCCCCCH
Confidence 4566777777777777777777777 456666655 677777777777777777777777776 66 67777777777
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcC
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQN 171 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (587)
||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..+..+++++|.+..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 77777777777777777777774 777777777777777777777766665544
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=171.06 Aligned_cols=112 Identities=18% Similarity=0.190 Sum_probs=78.6
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
+..|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll--~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~~~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV--AKGEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKG--AD-INAPDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH--HTTCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTT--CC-TTCCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHH--HcCCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcC--CC-CCcCCCCCCCHH
Confidence 345667777777777777777777 455666655 667777777777777777777777776 66 777777777777
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
|+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+.
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhCC
Confidence 7777777777777777777774 6777777777777743
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=175.92 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=116.0
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHH
Q 007858 74 VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 74 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~ 153 (587)
.|.+|.||||+|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~ 81 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG--SD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLH 81 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT--CC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHH
Confidence 3889999999999999999999999998 88 9999999999999999999999999999999996 899999999999
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
+|+..|+.+++++|+++++ .+..|.+|.||+++|+..+..++++.|.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 9999999999999999998 888999999999999999888888777665
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.86 E-value=9.4e-22 Score=167.80 Aligned_cols=117 Identities=19% Similarity=0.254 Sum_probs=105.9
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYI 154 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~ 154 (587)
+..|.||||.|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG--ED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT--CC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC--CC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence 567899999999999999999999998 88 9999999999999999999999999999999996 9999999999999
Q ss_pred HHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHH
Q 007858 155 AALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 155 A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
|+..|+.+++++|+++++ .+..+.+|.||+|+|...+..++
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999998 88899999999999955444433
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-22 Score=195.84 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=97.6
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCcccc------CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCC
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSL------QDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLLTIRGGGQ 148 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~------~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~~~~g 148 (587)
+.++||.|+..|+.+.|+.|++.+ ++ ++. .|..|.||||+|+.. |+.+++++|+++|+++ +.+|.+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g--~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G 226 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG--QD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 226 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT--CC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC--Cc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCC
Confidence 456677777777777777777776 66 555 577777777777776 6777777777777775 7777777
Q ss_pred CcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 149 MTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.||||+|+..|+.+++++|+++++ ++..|.+|.||||+|+..++.+++++|++. ++. .|.||||+|+..|+
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~--ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA--QAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH--HHH------TTSSCCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh--cCC------CCCChhHHHHhcCC
Confidence 777777777777777777777777 667777777777777777777777777776 332 57888888887765
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-22 Score=181.70 Aligned_cols=129 Identities=22% Similarity=0.260 Sum_probs=118.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCC-CCCCcHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG-GGQMTPLY 153 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~-~~g~tpL~ 153 (587)
+.+|.||||.|+..|+.++++.|++ + .+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.++ ..|.||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D--RD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T--SC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c--CC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHH
Confidence 5678999999999999999999999 7 78 9999999999999999999999999999999996 7777 89999999
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
+|+..|+.+++++|+++++ .+..|.+|.||||+|++.++ ...+.++|++++..+.
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-------------------~~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-------------------TTPKGNPMQFGRRIGL 171 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH-------------------TCCCCSHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc-------------------CcccccHHHHHHHcCH
Confidence 9999999999999999999 88899999999999987632 2457899999999885
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-22 Score=188.58 Aligned_cols=124 Identities=17% Similarity=0.208 Sum_probs=58.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHHH
Q 007858 75 TKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR-NPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~l~~~~~~~g~tpL~ 153 (587)
+.+|.||||+|+..|+.++|++|++.+ .+ ++.+|..|.||||+|+..|+.+++++|++. |+++ +.+|..|.||||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~ 145 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNR--VG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALH 145 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCC--CC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHH
Confidence 334445555555555555555555444 44 444444455555555555555555555544 4443 444444555555
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
+|+..|+.+++++|+++++ .+..+.+|.|||++|+..+..++++.|++.
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 5555555555555555444 444444455555555544444444444443
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=184.91 Aligned_cols=127 Identities=20% Similarity=0.176 Sum_probs=114.1
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHc-cCCCCccccCCCCCCcH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVEL-TGHDNLLSLQDENGNTA 117 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~ll~~~d~~g~Tp 117 (587)
+..|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.++|++|++. + ++ ++.+|..|.||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g--~~-~~~~d~~g~tp 143 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECL--DNRVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPN--IE-LNQQNKLGDTA 143 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTT--CC-CCCCCTTSCCH
T ss_pred ccccccccccccccCcHHHHHHHH--hCCCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCC--CC-ccccCCCCCCH
Confidence 446789999999999999999999 678888877 89999999999999999999999998 6 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.++++.|++.++
T Consensus 144 L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 99999999999999999999996 9999999999999999999999999999987
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-21 Score=187.82 Aligned_cols=142 Identities=15% Similarity=0.143 Sum_probs=123.5
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhh-----cCCCCCcHHHHHHhc---CCHHHHHHHHHccCCCCccccCCC
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAA-----VTKGYQTILHVATGA---KQTNFVKQMVELTGHDNLLSLQDE 112 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-----~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~ll~~~d~ 112 (587)
.+.++|+.|+..|+.+.++.|+ +.+.+++.. .+..|.||||+|+.. |+.+++++|+++| ++ ++.+|.
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll--~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--ad-vn~~d~ 224 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAF--ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GH-LDAKAA 224 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHH--HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS--SC-TTCCCT
T ss_pred chHHHHhhhhhccCHHHHHHHH--hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC--CC-CCCCCC
Confidence 3457799999999999999999 677888762 388999999999997 8999999999999 88 999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCc
Q 007858 113 NGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGL 192 (587)
Q Consensus 113 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~ 192 (587)
.|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|++.++ ..|.||||+|+..|+
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga-----~~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQA-----GTFAFPLHVDYSWVI 298 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH-----HTTSSCCC-------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC-----CCCCChhHHHHhcCC
Confidence 9999999999999999999999999996 9999999999999999999999999999987 368899999998875
Q ss_pred H
Q 007858 193 Y 193 (587)
Q Consensus 193 ~ 193 (587)
.
T Consensus 299 ~ 299 (301)
T 2b0o_E 299 S 299 (301)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-20 Score=149.40 Aligned_cols=92 Identities=25% Similarity=0.402 Sum_probs=78.9
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
+|+||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g--~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--AD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC--CC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 4788899999888899999888888 77 8888888899999999888999999998888885 888888889999998
Q ss_pred HhCChHHHHHHhhcCC
Q 007858 157 LFGQSKMASFLYRQNE 172 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~ 172 (587)
..|+.+++++|+++++
T Consensus 77 ~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 8888888888888774
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-20 Score=179.13 Aligned_cols=124 Identities=20% Similarity=0.239 Sum_probs=80.3
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhc-----CCCCCcHHHHHHhc---CCHHHHHHHHHccCCCCccccCCCCC
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAV-----TKGYQTILHVATGA---KQTNFVKQMVELTGHDNLLSLQDENG 114 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-----~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~ll~~~d~~g 114 (587)
.++|+.|+..|+.+.++.++ ..+.+++... +..|.||||+|+.. |+.+++++|+++| ++ ++.+|..|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll--~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--a~-in~~d~~g 205 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAY--ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GN-LDKQTGKG 205 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHH--HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SC-TTCCCTTC
T ss_pred hhhhhhHhhhcccHHHHHHH--HhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC--CC-ccccCCCC
Confidence 35666666666666666666 3344432221 55566677766666 6666666666666 66 66666666
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 115 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
+||||+|+..|+.++|++|+++|+++ +.+|.+|.||||+|+..|+.+++++|+++++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 67777766666666666666666664 6666666667776666666666666666665
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=187.12 Aligned_cols=125 Identities=20% Similarity=0.222 Sum_probs=82.4
Q ss_pred CCChHhHHHHHc-CCHHHHHHHHhhcCccchhhhcC--CCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 41 HKCVPLYKAALK-GDCNEAKRILGDDHQSMLRAAVT--KGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 41 ~~~t~L~~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~--~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
.+.|+||.|+.. |+.++++.|+ +.+.+++.. + ..|.||||+|+..|+.++|++|++++ ++ ++.+|..|+||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL--~~Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G--ad-vn~~d~~G~Tp 271 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADAL--AHGADVNWV-NGGQDNATPLIQATAANSLLACEFLLQNG--AN-VNQADSAGRGP 271 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHH--HTTCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCH
T ss_pred CCCcHHHHHHHccCCHHHHHHHH--HcCCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcC--CC-CCCCCCCCCCH
Confidence 345566666666 6666666666 456666654 4 56666666666666666666666666 66 66666666666
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|++.+.
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 66666666666666666666664 6666666666666666666666666666553
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-19 Score=145.28 Aligned_cols=93 Identities=27% Similarity=0.374 Sum_probs=87.2
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCF 120 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~ 120 (587)
+|+||||.|+..|+.++++.|+ +.+.+++.+ |..|.||||+|+..|+.+++++|++.| ++ ++.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll--~~g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~-~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL--EAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAG--AD-VNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHH--HcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCccCCCCCCHHHH
Confidence 4799999999999999999999 678899887 999999999999999999999999999 88 99999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCc
Q 007858 121 AAAVGSVEIAQFMLQRNPN 139 (587)
Q Consensus 121 Aa~~g~~~iv~~Ll~~~~~ 139 (587)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999874
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=179.99 Aligned_cols=148 Identities=15% Similarity=0.198 Sum_probs=117.5
Q ss_pred CCCCCcHHHHHHhc-CCHHHHHHHHHccCCCCccccCC--CCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcH
Q 007858 75 TKGYQTILHVATGA-KQTNFVKQMVELTGHDNLLSLQD--ENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTP 151 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~-g~~~iv~~Ll~~~~~~~ll~~~d--~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tp 151 (587)
+..+.|+||.|+.. |+.++++.|++.| ++ ++..| ..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~G--ad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~Tp 271 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHG--AD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGP 271 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTT--CC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcC--CC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 34567899999999 9999999999999 88 88888 89999999999999999999999999996 8999999999
Q ss_pred HHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhc-ccccccccccCCchHHHHHhhCC
Q 007858 152 LYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKN-KKLLAGATHAKYGTAMHMLARNP 226 (587)
Q Consensus 152 L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~d~~g~t~Lh~a~~~~ 226 (587)
||+|+..|+.+++++|+++++ .+..|.+|.||||+|+..++.+++++|++.. ........+..+.|+++.+....
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999 8889999999999999999999999999872 12223345566788888765543
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=171.08 Aligned_cols=161 Identities=17% Similarity=0.059 Sum_probs=133.0
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCcc----chhh------------------hcC-------CCCCcHHHHHHhc
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQS----MLRA------------------AVT-------KGYQTILHVATGA 88 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~----~~~~------------------~~~-------~~g~t~Lh~A~~~ 88 (587)
.|..+.++++.+...|+....+.+- ..-+. .+.. ... ....++||.|+..
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e-~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~ 140 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIME-CCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKT 140 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHT-TTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHH-hhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhh
Confidence 4557788999999999876655442 11110 0000 000 0123689999999
Q ss_pred CCHHHHHHHHHccCCCCc-----cccCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCC
Q 007858 89 KQTNFVKQMVELTGHDNL-----LSLQDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQ 160 (587)
Q Consensus 89 g~~~iv~~Ll~~~~~~~l-----l~~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~ 160 (587)
|+.+.++.+++.| .++ ++..|..|.||||+|+.. |+.+++++|+++|+++ +.+|..|.||||+|+..|+
T Consensus 141 ~d~~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 141 RDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp TCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTC
T ss_pred cccHHHHHHHHhh--cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCC
Confidence 9999999999998 552 445588999999999999 8999999999999996 9999999999999999999
Q ss_pred hHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 161 SKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 161 ~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
.+++++|+++++ ++..|.+|.||||+|+..|+.++++.|++.
T Consensus 218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999 889999999999999999999999999998
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-19 Score=150.52 Aligned_cols=106 Identities=24% Similarity=0.331 Sum_probs=50.7
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHH
Q 007858 39 YSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAF 118 (587)
Q Consensus 39 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpL 118 (587)
+.+|.||||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.|||
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll--~~g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~-~~~~d~~g~tpl 79 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLL--SKGADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKG--AD-VNARSKDGNTPE 79 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHT--TTTCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTT--CC-TTCCCTTCCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH--HcCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcC--CC-CcccCCCCCCHH
Confidence 344455555555555555555544 334444443 444555555555555555555555444 44 444444555555
Q ss_pred HHHHHcCCHHHHHHHHhcCCcccccCCCCCCcH
Q 007858 119 CFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTP 151 (587)
Q Consensus 119 h~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tp 151 (587)
|+|+..|+.+++++|+++|+++ +.++..|.||
T Consensus 80 ~~A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~ 111 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLLDAKGADV-NARSWGSSHH 111 (115)
T ss_dssp HHHHTTTCHHHHHHHHTTSSSH-HHHSCCCC--
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-CcCCcccccc
Confidence 5555555555555555555543 4444444443
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-19 Score=149.33 Aligned_cols=106 Identities=22% Similarity=0.282 Sum_probs=98.7
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHH
Q 007858 74 VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 74 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~ 153 (587)
.|.+|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG--AD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT--CC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHH
Confidence 3889999999999999999999999998 88 9999999999999999999999999999999996 899999999999
Q ss_pred HHHHhCChHHHHHHhhcCC-CCCCCCCCchH
Q 007858 154 IAALFGQSKMASFLYRQNE-DNLEPDDLENT 183 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~ 183 (587)
+|+..|+.+++++|+++++ .+..+..|.+|
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 9999999999999999998 77777777776
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=137.84 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=79.1
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHH
Q 007858 74 VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 74 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~ 153 (587)
.+.+|.||||+|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~ 95 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANG--AD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFD 95 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTT--CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcC--CC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHH
Confidence 3788899999999999999999999888 78 8888999999999999999999999999999885 888899999999
Q ss_pred HHHHhCChHHHHHH
Q 007858 154 IAALFGQSKMASFL 167 (587)
Q Consensus 154 ~A~~~g~~~~v~~L 167 (587)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999998876
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-16 Score=131.49 Aligned_cols=92 Identities=25% Similarity=0.302 Sum_probs=84.1
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCC
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGN 115 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~ 115 (587)
...+.+|.|+||.|+..|+.++++.|+ +.+.+++.. |..|.||||+|+..|+.+++++|+++| ++ ++.+|..|.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll--~~g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~g--a~-~~~~d~~g~ 91 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILM--ANGADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAG--AD-VXAQDKFGK 91 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHH--HTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHH--HcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CC-ccccccCCC
Confidence 356788999999999999999999999 678888887 899999999999999999999999998 88 999999999
Q ss_pred cHHHHHHHcCCHHHHHHH
Q 007858 116 TAFCFAAAVGSVEIAQFM 133 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~L 133 (587)
||||+|+..|+.+++++|
T Consensus 92 tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHh
Confidence 999999999999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 587 | ||||
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 9e-13 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 7e-10 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 7e-10 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 1e-07 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 3e-07 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 2e-05 | |
| d1oy3d_ | 255 | d.211.1.1 (D:) Transcription factor inhibitor I-ka | 6e-11 | |
| d1oy3d_ | 255 | d.211.1.1 (D:) Transcription factor inhibitor I-ka | 8e-06 | |
| d1s70b_ | 291 | d.211.1.1 (B:) Myosin phosphatase targeting subuni | 6e-09 | |
| d2fo1e1 | 277 | d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele | 1e-08 | |
| d2fo1e1 | 277 | d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele | 1e-06 | |
| d1sw6a_ | 301 | d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker | 1e-08 | |
| d1sw6a_ | 301 | d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker | 1e-07 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 5e-08 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 2e-07 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 1e-05 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 9e-05 | |
| d2ajaa1 | 346 | a.118.24.1 (A:3-348) Hypothetical protein LPG2416 | 6e-08 | |
| d2ajaa1 | 346 | a.118.24.1 (A:3-348) Hypothetical protein LPG2416 | 0.001 | |
| d1k1aa_ | 228 | d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: | 1e-07 | |
| d1ixva_ | 229 | d.211.1.1 (A:) 26S proteasome non-ATPase regulator | 1e-05 | |
| d1uoha_ | 223 | d.211.1.1 (A:) 26S proteasome non-ATPase regulator | 2e-04 | |
| d1uoha_ | 223 | d.211.1.1 (A:) 26S proteasome non-ATPase regulator | 0.001 | |
| d1ot8a_ | 209 | d.211.1.1 (A:) Neurogenic locus notch receptor dom | 0.003 |
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.7 bits (164), Expect = 9e-13
Identities = 60/334 (17%), Positives = 105/334 (31%), Gaps = 21/334 (6%)
Query: 37 KQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQ 96
+ PL+ AA G N K +L A A + V+
Sbjct: 61 AKAKDDQTPLHCAARIGHTNMVKLLL------ENNANPNLATTAGHTPLHIAAREGHVET 114
Query: 97 MVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156
++ L + + + G T AA G V +A+ +L+R+ + G +TPL++A
Sbjct: 115 VLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAV 173
Query: 157 LFGQSKMASFLYRQNEDNLEPDDLENT-FFVSIETGLYGLALQLLKKNKKLLAGATHAKY 215
+ L + P T ++ + +A LL+ A +
Sbjct: 174 HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ--G 231
Query: 216 GTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISK---STHK 272
T +H+ A+ + L N T + + ++
Sbjct: 232 VTPLHLAAQE---GHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 288
Query: 273 DVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK 332
V L A+H GN K + L + D+ + + G S H A H D
Sbjct: 289 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK-TKLGYSPLHQAAQQGHTDIVT 347
Query: 333 LIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPK 366
L+ + G V G L +A +
Sbjct: 348 LLLKNGASPNE----VSSDGTTPLAIAKRLGYIS 377
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.8 bits (141), Expect = 7e-10
Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 8/211 (3%)
Query: 149 MTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENT-FFVSIETGLYGLALQLLKKNKKLL 207
+TPL++A+ G + L ++ + T ++ G +A LL+ K+
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60
Query: 208 AGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS 267
A A + T +H AR T A
Sbjct: 61 AKAKDDQ--TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 118
Query: 268 KSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRH 327
+ K L AA G + +L + +NG + H+AV H +
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNN 177
Query: 328 ADTFKLIYEMGFDKELIATYVDVSGNNLLHL 358
D KL+ G +G LH+
Sbjct: 178 LDIVKLLLPRGGSPHS----PAWNGYTPLHI 204
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.8 bits (141), Expect = 7e-10
Identities = 49/289 (16%), Positives = 85/289 (29%), Gaps = 43/289 (14%)
Query: 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPN 139
T LHVA+ VK +++ G ++ + T AA G E+A+++LQ
Sbjct: 2 TPLHVASFMGHLPIVKNLLQR-GAS--PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK 58
Query: 140 LLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQL 199
+ + TPL+ AA G + M L N + +
Sbjct: 59 -VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGH----------------- 100
Query: 200 LKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELV 259
+ A A + F + + + +
Sbjct: 101 ------------TPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA 148
Query: 260 KCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIF 319
+ L + + L A H N + +L H NG +
Sbjct: 149 ELLLERDAHPNAAG-----KNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPL 202
Query: 320 HIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPI 368
HIA + + + + G V G LHLAAQ + + +
Sbjct: 203 HIAAKQNQVEVARSLLQYGGSA----NAESVQGVTPLHLAAQEGHAEMV 247
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (122), Expect = 1e-07
Identities = 56/358 (15%), Positives = 103/358 (28%), Gaps = 52/358 (14%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
PL+ A+ G K +L + + K T LH+A A T K +++ +
Sbjct: 3 PLHVASFMGHLPIVKNLL--QRGASPNVSNVKVE-TPLHMAARAGHTEVAKYLLQ---NK 56
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNL------------------------ 140
++ + ++ T AA +G + + +L+ N N
Sbjct: 57 AKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVL 116
Query: 141 --------LTIRGGGQMTPLYIAALFGQSKMASFLYRQNED-NLEPDDLENTFFVSIETG 191
TPL++AA +G+ ++A L ++ N + V++
Sbjct: 117 ALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 176
Query: 192 LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDS 251
+ LL + H+ L L G +
Sbjct: 177 NLDIVKLLLPRGGSP-----HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG 231
Query: 252 STQALELVKCLWKEISKSTHKDVLKLISKPSK---LLFDAAHSGNFKFLAVLTRSYPDLV 308
T + E+ L A G+ VL + V
Sbjct: 232 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-V 290
Query: 309 HQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPK 366
G + H+A + + K + + D G + LH AAQ +
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA----KTKLGYSPLHQAAQQGHTD 344
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (119), Expect = 3e-07
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 40 SHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVE 99
PL+ A +G A ++ H M+ A T+ T LHVA+ VK +++
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLI--KHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLLQ 318
Query: 100 LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAAL 157
N + + G + AA G +I +L+ +PN ++ G TPL IA
Sbjct: 319 HQADVNA---KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG---TTPLAIAKR 372
Query: 158 FGQSKMASFL 167
G + L
Sbjct: 373 LGYISVTDVL 382
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 47/267 (17%), Positives = 91/267 (34%), Gaps = 16/267 (5%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
+TK T LHVA + + ++E D + +NG T A +++I +
Sbjct: 127 CMTKKGFTPLHVAAKYGKVRVAELLLE---RDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 183
Query: 133 MLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENT-FFVSIETG 191
+L R + TPL+IAA Q ++A L + T ++ + G
Sbjct: 184 LLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEG 242
Query: 192 LYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDS 251
+ LL K + T +H++A+ L G+
Sbjct: 243 HAEMVALLLSKQANG--NLGNKSGLTPLHLVAQEGHV---PVADVLIKHGVMVDATTRMG 297
Query: 252 STQALELVKCLWKEISKSTHKDVLKLISKPSKL----LFDAAHSGNFKFLAVLTRSYPDL 307
T L + ++ +KL L AA G+ + +L ++
Sbjct: 298 YT-PLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS- 355
Query: 308 VHQLDENGRSIFHIAVMHRHADTFKLI 334
+++ +G + IA + ++
Sbjct: 356 PNEVSSDGTTPLAIAKRLGYISVTDVL 382
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.9 bits (146), Expect = 6e-11
Identities = 35/249 (14%), Positives = 74/249 (29%), Gaps = 17/249 (6%)
Query: 106 LLSLQDENGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKM 163
+ E+G+TA A F+L L ++ T L++AA+ G++
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST 60
Query: 164 ASFLYRQNEDNLEPDDLENTFF-VSIETGLYGLALQLLKK--------NKKLLAGATHAK 214
LY L + +T ++ + A LL+ + L +
Sbjct: 61 VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120
Query: 215 YGTAMHMLARNPSAFTSNCPGWLKVPG-----IKFITNNTDSSTQALELVKCLWKEISKS 269
T+ A + N + +T + + + + +
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180
Query: 270 THKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHAD 329
+ L A + L +L ++ D GR+ A++ +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPI 239
Query: 330 TFKLIYEMG 338
+L+ G
Sbjct: 240 LARLLRAHG 248
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.1 bits (105), Expect = 8e-06
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 311 LDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNP 365
+ E+G + H+AV+H+H + E + + G LHLAA
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL-DLQNDLGQTALHLAAILGEA 58
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 55.1 bits (131), Expect = 6e-09
Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 17/251 (6%)
Query: 113 NGNTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQ 170
+ F A + G E +L+R + N + G +T L+ A + M FL
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDG---LTALHQACIDDNVDMVKFLVEN 95
Query: 171 NEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFT 230
+ +PD+ + + Y + L + G +A +
Sbjct: 96 GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNS--EGDTPLDIAEEEAMEE 153
Query: 231 SNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAH 290
+ + + + L S H + ++ L AA
Sbjct: 154 LLQNEVNRQGVDIEAARKEEERIMLRDARQWLN-----SGHINDVRHAKSGGTALHVAAA 208
Query: 291 SGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDV 350
G + L +L ++ D V+ D +G + H A + +++ E D E V+
Sbjct: 209 KGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA----VNK 263
Query: 351 SGNNLLHLAAQ 361
G +A +
Sbjct: 264 VGQTAFDVADE 274
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Score = 54.4 bits (129), Expect = 1e-08
Identities = 37/296 (12%), Positives = 89/296 (30%), Gaps = 36/296 (12%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNP 138
++ + + T A + + + + +++ + + T + A+ S E ++ ++
Sbjct: 1 ESPIKLHTEAAGSYAITEPIT---RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA 57
Query: 139 NLLTIRG-------GGQMTPLYIAALFGQSKMASFLYRQNEDNLEPD-DLENTFFVSIET 190
G + TPL +A L + ++ ++L + D + + +
Sbjct: 58 KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN 117
Query: 191 GLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTD 250
+G+ + +L K + G M+ + L V
Sbjct: 118 RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV----------- 166
Query: 251 SSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQ 310
++ K L AA N + L +
Sbjct: 167 ----------EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 216
Query: 311 LDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPK 366
DE+G++ +A + + + G E VD + + LA ++
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA----VDATDHTARQLAQANNHHN 268
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Score = 48.2 bits (113), Expect = 1e-06
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQR-- 136
+T LH A VK +V G + QDE+G T AA G +E+ +++Q+
Sbjct: 188 RTALHYAAQVSNMPIVKYLVGEKGSNK--DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 245
Query: 137 NPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169
+ + T +A + R
Sbjct: 246 SVEAVDATD---HTARQLAQANNHHNIVDIFDR 275
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 55 CNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENG 114
+ Q+ + T ++ + G ++ + ++ + N+L+ QD NG
Sbjct: 200 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 259
Query: 115 NTAFCFAAAVGSVEIAQFMLQR--NPNLLTIRGGGQMTPLYIAA 156
+T AA +G++ I +L +P + G + P+ A
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGADPFIANKSG---LRPVDFGA 300
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 29/217 (13%)
Query: 149 MTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLA 208
TPL+ ++ L + + L D++ + V + + L
Sbjct: 108 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 167
Query: 209 G---ATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE 265
+ T +H + + T S A + L
Sbjct: 168 PCLILEDSMNRTILHHIIIT--------------------SGMTGCSAAAKYYLDILMGW 207
Query: 266 ISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSY--PDLVHQLDENGRSIFHIAV 323
I K ++ + ++ D L L + ++++ D NG + +IA
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267
Query: 324 MHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAA 360
+ + + G D + + SG + A
Sbjct: 268 RLGNISIVDALLDYGADPFI----ANKSGLRPVDFGA 300
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (124), Expect = 5e-08
Identities = 48/295 (16%), Positives = 83/295 (28%), Gaps = 42/295 (14%)
Query: 113 NGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172
N A V++ Q +L+ N+ G TPL+ A + + L R
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 173 DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSN 232
D + T F+ A G+ + N
Sbjct: 64 DPVLRKKNGATPFL------------------------LAAIAGSVKLLKLFLSKGADVN 99
Query: 233 CPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSG 292
+ + + + T +D +L + L DAA G
Sbjct: 100 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159
Query: 293 NFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSG 352
+ + L +L V+ D GR+ A++ + I + D G
Sbjct: 160 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERG 219
Query: 353 NNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSFKEMKNNDGKTP 407
L LA + + L + Q L + +E ++DGKT
Sbjct: 220 KTPLILAVEKKH-----------LGLVQRLLEQEHIEI-------NDTDSDGKTA 256
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (120), Expect = 2e-07
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L AA KG K +L D+ + + A G ++H + ++ L H
Sbjct: 151 ALMDAAEKGHVEVLKILL-DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMA 164
++++ E G T A + + Q +L++ + T L +A K+A
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269
Query: 165 SFL 167
L
Sbjct: 270 ELL 272
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (104), Expect = 1e-05
Identities = 42/279 (15%), Positives = 89/279 (31%), Gaps = 21/279 (7%)
Query: 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPN 139
+L A + + V+Q++E N+ ++E G T A + +I + +L+ +
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64
Query: 140 LLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFF---------VSIET 190
+R TP +AA+ G K+ + D E D T F +++
Sbjct: 65 -PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 191 GLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTD 250
A L++ K TA+ A L G +
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI--LLDEMGADVNACDNM 181
Query: 251 SSTQALELVKCLWKEISKSTHKDVLKLISKPSK-------LLFDAAHSGNFKFLAVLTRS 303
+ + ++ +L + + L A + + L
Sbjct: 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241
Query: 304 YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKE 342
++ D +G++ +AV + +L+ + G +
Sbjct: 242 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (98), Expect = 9e-05
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 73 AVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQF 132
+ +T L +A K V++++E + ++ D +G TA A + +IA+
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIE--INDTDSDGKTALLLAVELKLKKIAEL 271
Query: 133 MLQR--NPN 139
+ +R + +
Sbjct: 272 LCKRGASTD 280
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Score = 52.6 bits (125), Expect = 6e-08
Identities = 31/292 (10%), Positives = 70/292 (23%), Gaps = 59/292 (20%)
Query: 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNP 138
+ I VA ++ + + L D ++ + AF AA G + + + + P
Sbjct: 91 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150
Query: 139 NLLTIRGGGQ-MTPLYIAALFGQSKMASFLYRQ----NEDNLEPDDLENTFFVSIETGLY 193
+ + +AA G + + L ++ ++ + ++ G +
Sbjct: 151 TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 210
Query: 194 GLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSST 253
+ LL L A
Sbjct: 211 NVINFLLDCPVML---------AYAEIHEFEYGE-------------------------- 235
Query: 254 QALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDE 313
+ + + +++ + G F +
Sbjct: 236 --KYVNPFIARHVNRLKEMH---------DAFKLSNPDGVFDLVTKSECLQ-------GF 277
Query: 314 NGRSIFHIAVMHRHADTFKLIYEMGFDKELI-ATYVDVSGNNLLHLAAQYSN 364
D + + + K L + N LL LA + N
Sbjct: 278 YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 329
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Score = 38.7 bits (89), Expect = 0.001
Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 251 SSTQALELVKCLWKEISKSTHKDVLKLISKPSK------LLFDAAHSGNFKFLAVLTR-- 302
+ ++ + L + K + F AA +G L L
Sbjct: 54 GTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLL 113
Query: 303 SYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQY 362
+ ++V + F +A + H + E+ + + + LAA+
Sbjct: 114 TSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI--MAMIQAENYHAFRLAAEN 171
Query: 363 SNPKPI 368
+ +
Sbjct: 172 GHLHVL 177
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (119), Expect = 1e-07
Identities = 33/231 (14%), Positives = 64/231 (27%), Gaps = 14/231 (6%)
Query: 112 ENGNTAFCFAAAVGSVEIAQFMLQR------NPNLLTIRGGGQMTPLYIAALFGQSKMAS 165
E+G+T A G++ ++ ++ TPL++A + +
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR---QTPLHLAVITTLPSVVR 57
Query: 166 FLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARN 225
L + D T L+ L + A+ + L
Sbjct: 58 LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 117
Query: 226 PSAFTSNCPGWLKVPGIKFITNNTDSSTQ----ALELVKCLWKEISKSTHKDVLKLISKP 281
+ L G + S A+E ++ +V +
Sbjct: 118 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG 177
Query: 282 SKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFK 332
S L A+ G + L RS D + + + +A R D +
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILR 227
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.4 bits (103), Expect = 1e-05
Identities = 29/231 (12%), Positives = 60/231 (25%), Gaps = 8/231 (3%)
Query: 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQ-NED 173
N A Q +L P+LL + PL+ + F ++ SFL +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 174 NLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNC 233
NL+ ++ + G + + L + + L
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 234 PGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAH--- 290
+L G + + ++ + ++ K +
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180
Query: 291 -SGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340
G+ +L Y +D G +A+ + K D
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 42/256 (16%), Positives = 70/256 (27%), Gaps = 59/256 (23%)
Query: 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDN 174
N C A G +E + + + +L T T L+ A G +++ FL +
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 175 LEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCP 234
+ K L SA
Sbjct: 64 -------------------------------------NDKDDAGWSPLHIAASAGRDEIV 86
Query: 235 GWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKL---------- 284
L G + N + T L SK+ H+ + L+ +
Sbjct: 87 KALLGKGAQVNAVNQNGCT-------PLHYAASKNRHEIAVMLLEGGANPDAKDHYEATA 139
Query: 285 LFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI 344
+ AA GN K + +L Q D G + H+A + KL+ G +
Sbjct: 140 MHRAAAKGNLKMIHILLYYKASTNIQ-DTEGNTPLHLACDEERVEEAKLLVSQGASIYI- 197
Query: 345 ATYVDVSGNNLLHLAA 360
+ L +A
Sbjct: 198 ---ENKEEKTPLQVAK 210
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.001
Identities = 34/185 (18%), Positives = 56/185 (30%), Gaps = 17/185 (9%)
Query: 45 PLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHD 104
L+ A G + +L A + + L G
Sbjct: 40 ALHWACSAGHTEIVEFLLQLGVPVN------DKDDAGWSPLHIAASAGRDEIVKALLGKG 93
Query: 105 NLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMA 164
++ ++NG T +AA+ EIA +L+ N + + T ++ AA G KM
Sbjct: 94 AQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYEATAMHRAAAKGNLKMI 152
Query: 165 SFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGA---THAKYG-TAMH 220
L D NT +LL + GA K T +
Sbjct: 153 HILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLL-----VSQGASIYIENKEEKTPLQ 207
Query: 221 MLARN 225
+A+
Sbjct: 208 -VAKG 211
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 37.1 bits (84), Expect = 0.003
Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 3/209 (1%)
Query: 126 SVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFF 185
+ ++ +L + L T L++AA F ++ A L D D+ T
Sbjct: 1 TAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPL 60
Query: 186 VSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFI 245
+ Q+L +N+ A T + + AR I
Sbjct: 61 HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDL-ITADADINAA 119
Query: 246 TNNTDSSTQALELVKCLWK-EISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSY 304
N+ ++ V I H + K LF AA G+++ L ++
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179
Query: 305 PDLVHQLDENGRSIFHIAVMHRHADTFKL 333
+ D R +A H D +L
Sbjct: 180 AN-REITDHMDRLPRDVASERLHHDIVRL 207
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 587 | |||
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 100.0 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 100.0 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 100.0 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 100.0 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 100.0 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 100.0 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 100.0 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 100.0 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.98 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.96 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.96 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.95 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.94 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.94 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.92 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.92 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.92 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.91 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.9 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.9 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.9 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.9 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.89 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.87 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.87 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.86 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.85 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.8 |
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-44 Score=369.61 Aligned_cols=333 Identities=18% Similarity=0.211 Sum_probs=280.1
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
-||||.||..|+.++|+.|+ +.|.+++.. |.+|+||||+|+..|+.++|++|+++| ++ ++.+|.+|.||||+|+
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll--~~g~~in~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~g--ad-i~~~~~~g~t~L~~A~ 74 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLL--QRGASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNK--AK-VNAKAKDDQTPLHCAA 74 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHH--HTTCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHT--CC-SSCCCTTSCCHHHHHH
T ss_pred CChHHHHHHCcCHHHHHHHH--HCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCc--CC-CCCCCCCCCCHHHHHH
Confidence 38999999999999999999 678899987 999999999999999999999999999 88 9999999999999999
Q ss_pred HcCCHHHHHHHHhcCCcc--------------------------------cccCCCCCCcHHHHHHHhCChHHHHHHhhc
Q 007858 123 AVGSVEIAQFMLQRNPNL--------------------------------LTIRGGGQMTPLYIAALFGQSKMASFLYRQ 170 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l--------------------------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (587)
..|+.+++++|++.+++. ....+.++.++++.|+..++.+++++|+++
T Consensus 75 ~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~ 154 (408)
T d1n11a_ 75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 154 (408)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999765542 134577889999999999999999999999
Q ss_pred CC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCC-------------cccCCCCC
Q 007858 171 NE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSA-------------FTSNCPGW 236 (587)
Q Consensus 171 ~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~-------------~~~~~~~~ 236 (587)
+. .+..+.+|.+|||.|+..++.++++.|+++ +..++..+..|.||+|.+....+. ......+.
T Consensus 155 ~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 232 (408)
T d1n11a_ 155 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV 232 (408)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhc--CCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCC
Confidence 98 888899999999999999999999999987 778888899999999998876642 00000000
Q ss_pred ccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC
Q 007858 237 LKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGR 316 (587)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 316 (587)
.++ ....... ..++++.+.+.+...+..+ ..|.||++.|++.++.+++++|++++++ ++..+..+.
T Consensus 233 t~l-----~~a~~~~---~~~~~~~~~~~~~~~~~~~-----~~g~~~l~~a~~~~~~~i~~~Ll~~g~~-~~~~~~~~~ 298 (408)
T d1n11a_ 233 TPL-----HLAAQEG---HAEMVALLLSKQANGNLGN-----KSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGY 298 (408)
T ss_dssp CHH-----HHHHHTT---CHHHHHHHHTTTCCTTCCC-----TTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCC
T ss_pred CHH-----HHHHHhC---cHhHhhhhhcccccccccc-----CCCCChhhhhhhcCcHHHHHHHHHCCCc-ccccccccc
Confidence 000 0000011 1566777766666555433 4789999999999999999999999999 689999999
Q ss_pred chHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHHHhhhHHHHHHhccccc
Q 007858 317 SIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQELKTFKEVETIVKPSF 396 (587)
Q Consensus 317 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~ 396 (587)
||||.|+..++.++++++++.|++++ .+|.+|+||||+|++.|+.++++.| +.+|++
T Consensus 299 t~L~~~~~~~~~~~~~~ll~~g~~in----~~d~~G~T~Lh~A~~~g~~~iv~~L-------------------l~~GAd 355 (408)
T d1n11a_ 299 TPLHVASHYGNIKLVKFLLQHQADVN----AKTKLGYSPLHQAAQQGHTDIVTLL-------------------LKNGAS 355 (408)
T ss_dssp CHHHHHHHSSCSHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCC
T ss_pred ccchhhcccCcceeeeeecccccccc----ccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCC
Confidence 99999999999999999999999865 7999999999999999998776666 568999
Q ss_pred ccccCCCCCCchhhhHHh-hhHHHH
Q 007858 397 KEMKNNDGKTPWELFTDE-HKTLLE 420 (587)
Q Consensus 397 ~~~~n~~g~t~l~~a~~~-~~~l~~ 420 (587)
++.+|++|+||+|+|.+. +.++++
T Consensus 356 ~n~~d~~G~t~L~~A~~~~~~~iv~ 380 (408)
T d1n11a_ 356 PNEVSSDGTTPLAIAKRLGYISVTD 380 (408)
T ss_dssp SCCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999775 445443
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=343.97 Aligned_cols=309 Identities=22% Similarity=0.235 Sum_probs=258.0
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccC---------------
Q 007858 38 QYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTG--------------- 102 (587)
Q Consensus 38 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~--------------- 102 (587)
.+..|+||||+|+..|+.+++++|+ +++++++.. +.+|.||||+|+..|+.+++++|++.+.
T Consensus 29 ~d~~g~TpL~~A~~~g~~~iv~~Ll--~~gadi~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 105 (408)
T d1n11a_ 29 SNVKVETPLHMAARAGHTEVAKYLL--QNKAKVNAK-AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHI 105 (408)
T ss_dssp SSSCCCCHHHHHHHHTCHHHHHHHH--HHTCCSSCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHH--HCcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhhh
Confidence 4678999999999999999999999 678899887 8999999999999999999999997651
Q ss_pred ----------------CCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHH
Q 007858 103 ----------------HDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASF 166 (587)
Q Consensus 103 ----------------~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (587)
... .+..+..+.++|+.|+..++.++++.|++++.++ +..+.+|.+|||+|+..|+.+++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~-~~~~~~~~~~L~~A~~~~~~~~~~~ 183 (408)
T d1n11a_ 106 AAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKL 183 (408)
T ss_dssp HHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHH
T ss_pred hhhhccccccccccccccc-ccccccccchHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCcCchHHHHHHHcCCHHHHHH
Confidence 112 4556788999999999999999999999999995 8899999999999999999999999
Q ss_pred HhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCc-------------ccC
Q 007858 167 LYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAF-------------TSN 232 (587)
Q Consensus 167 Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~-------------~~~ 232 (587)
|+++++ .+..+..|.||+|.+......+....++.. .......+..|.||||+|+..++.. ...
T Consensus 184 Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 261 (408)
T d1n11a_ 184 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY--GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 261 (408)
T ss_dssp HGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhc--cccccccCCCCCCHHHHHHHhCcHhHhhhhhcccccccccc
Confidence 999988 777888888888888888888888888876 5555667777888888887776520 000
Q ss_pred CCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCcccccc
Q 007858 233 CPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLD 312 (587)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d 312 (587)
..|..++.. ..... ..+++++|+++|.+++.... .+.||||.++..++.++++.+++.+++ ++.+|
T Consensus 262 ~~g~~~l~~-----a~~~~---~~~i~~~Ll~~g~~~~~~~~-----~~~t~L~~~~~~~~~~~~~~ll~~g~~-in~~d 327 (408)
T d1n11a_ 262 KSGLTPLHL-----VAQEG---HVPVADVLIKHGVMVDATTR-----MGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKT 327 (408)
T ss_dssp TTCCCHHHH-----HHHHT---CHHHHHHHHHHTCCTTCCCS-----SCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCC
T ss_pred CCCCChhhh-----hhhcC---cHHHHHHHHHCCCccccccc-----cccccchhhcccCcceeeeeecccccc-ccccC
Confidence 001111100 00001 17899999999988776543 679999999999999999999999999 79999
Q ss_pred CCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 313 ENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 313 ~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
.+|+||||+|+++|+.+++++|+++|++++ .+|++|+||||+|++.|+.++++.|
T Consensus 328 ~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n----~~d~~G~t~L~~A~~~~~~~iv~~L 382 (408)
T d1n11a_ 328 KLGYSPLHQAAQQGHTDIVTLLLKNGASPN----EVSSDGTTPLAIAKRLGYISVTDVL 382 (408)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSC----CCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999976 7999999999999999997766554
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-36 Score=292.78 Aligned_cols=232 Identities=17% Similarity=0.160 Sum_probs=178.0
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHH
Q 007858 74 VTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLY 153 (587)
Q Consensus 74 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~ 153 (587)
+|.+|.||||+||+.|+.+++++|++.+.....++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||
T Consensus 5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~tpL~ 83 (255)
T d1oy3d_ 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALH 83 (255)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHH
T ss_pred CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccc-cccccccchhhh
Confidence 4788899999999999999999999887333336678888999999999999999999999999885 888889999999
Q ss_pred HHHHhCChHHHHHHhhcCCCCCCCC-----------CCchHHHHHH---HhCcHHHHHHHHHhcccccccccccCCchHH
Q 007858 154 IAALFGQSKMASFLYRQNEDNLEPD-----------DLENTFFVSI---ETGLYGLALQLLKKNKKLLAGATHAKYGTAM 219 (587)
Q Consensus 154 ~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~g~t~l~~a~---~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~L 219 (587)
+|+..++.+++++|++.......+. ........+. ..........+... .+...+.+|.+|.|||
T Consensus 84 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~in~~d~~g~TpL 162 (255)
T d1oy3d_ 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED-WRLQLEAENYDGHTPL 162 (255)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC-GGGGTTCCCTTSCCHH
T ss_pred hhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhh-cCcccccccccCcccc
Confidence 9999999999998887765111000 0011111111 11111111112222 4566678899999999
Q ss_pred HHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHH
Q 007858 220 HMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAV 299 (587)
Q Consensus 220 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~ 299 (587)
|+|+..++ .+++++|++.+.+.+... +..|.||||+|++.|+.+++++
T Consensus 163 h~A~~~~~----------------------------~~~v~~Ll~~~~~~~~~~----~~~g~TpL~~A~~~~~~~~v~~ 210 (255)
T d1oy3d_ 163 HVAVIHKD----------------------------AEMVRLLRDAGADLNKPE----PTCGRTPLHLAVEAQAASVLEL 210 (255)
T ss_dssp HHHHHTTC----------------------------HHHHHHHHHHTCCTTCCC----TTTCCCHHHHHHHTTCHHHHHH
T ss_pred cccccccc----------------------------cccccchhcccccccccc----cccccccccccccccHHHHHHH
Confidence 99999997 899999999998777543 2478999999999999999999
Q ss_pred HHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 300 LTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 300 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
|+++|++ ++.+|.+|+||||+|+.+++.+++++|+++|++
T Consensus 211 Ll~~gad-in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~ 250 (255)
T d1oy3d_ 211 LLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250 (255)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred HHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999 799999999999999999999999999999996
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-35 Score=275.60 Aligned_cols=220 Identities=20% Similarity=0.208 Sum_probs=173.1
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
+++.|+.+|+.|+.+.++.++ ..++..++.. |.+|+||||+|+..|+.+++++|++.+ .+ ....+..+.++++.+
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l-~~~~~~~~~~-D~~G~TpLh~Aa~~g~~e~~~~l~~~~--~~-~~~~~~~~~~~~~~~ 77 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESI-LADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLG--VP-VNDKDDAGWSPLHIA 77 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHH-HHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHHT--CC-SCCCCTTCCCHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHH-HhCCCcCcCc-CCCCCCHHHHHHHhhhhcccccccccc--cc-ccccccccccccccc
Confidence 467888899999999999998 7788888877 899999999999999999999999987 66 777788889999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHH
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLK 201 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 201 (587)
+..|+.+++++|+++++++ +.+|.+|.||||+|+..|+.+++++|++++.
T Consensus 78 ~~~~~~~i~~~Ll~~~~d~-~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~----------------------------- 127 (223)
T d1uoha_ 78 ASAGRDEIVKALLGKGAQV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGA----------------------------- 127 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----------------------------
T ss_pred ccccccchhHHHhccCcee-EeeCCCCCchhhHHHHcCCHHHHHHHHHCCC-----------------------------
Confidence 9999999999999999885 8899999999999999999999999988876
Q ss_pred hcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCC
Q 007858 202 KNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKP 281 (587)
Q Consensus 202 ~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g 281 (587)
+++.+|..|.||||+++..++ .+++++|.+.+.+++..+ ..|
T Consensus 128 -----d~~~~~~~~~t~L~~a~~~~~----------------------------~~~~~~L~~~~~~i~~~d-----~~g 169 (223)
T d1uoha_ 128 -----NPDAKDHYEATAMHRAAAKGN----------------------------LKMIHILLYYKASTNIQD-----TEG 169 (223)
T ss_dssp -----CTTCCCTTSCCHHHHHHHTTC----------------------------HHHHHHHHHTTCCSCCCC-----TTC
T ss_pred -----CCCCcCCCCCccchhhhhcCC----------------------------cchhhhhccccceeeecc-----CCC
Confidence 223344455555555555544 445555555555444433 256
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHh
Q 007858 282 SKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYE 336 (587)
Q Consensus 282 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 336 (587)
.||||.|+..|+.+++++|+++|++ ++.+|.+|+||||+| ..|+.+++++|++
T Consensus 170 ~TpL~~Aa~~g~~~~v~~LL~~Gad-~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 170 NTPLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVA-KGGLGLILKRMVE 222 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred CceeccccccCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence 7777777777788888888888888 688888888888887 4688888888875
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-34 Score=278.91 Aligned_cols=267 Identities=18% Similarity=0.222 Sum_probs=236.4
Q ss_pred CChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHH
Q 007858 42 KCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFA 121 (587)
Q Consensus 42 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~A 121 (587)
+.|+||.|++.|+.++|+.|+ +.|.+++.+.+..|.||||+|+..|+.+++++|++.+ .. ....+..+.+|.+.|
T Consensus 5 ~~~~L~~Ai~~~~~e~vk~Ll--~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~--~~-~~~~~~~~~~~~~~~ 79 (285)
T d1wdya_ 5 DNHLLIKAVQNEDVDLVQQLL--EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--AD-PVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH--HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTCCCHHHHH
T ss_pred CcHHHHHHHHcCCHHHHHHHH--HCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhcccc--cc-ccccccccchhhHHH
Confidence 578999999999999999999 6789998886778999999999999999999999998 77 788888999999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC----------CCCCCchHHHHHHHh
Q 007858 122 AAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNL----------EPDDLENTFFVSIET 190 (587)
Q Consensus 122 a~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~----------~~~~g~t~l~~a~~~ 190 (587)
+..+..+....+++...+. ...+..+.|+++.|+..++.+.++.++.... .+. .+..|.||||.|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T d1wdya_ 80 AIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred hhcCCccccchhhhhcccc-cccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHc
Confidence 9999999999999998774 7788999999999999999999999988765 222 566789999999999
Q ss_pred CcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccc
Q 007858 191 GLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKST 270 (587)
Q Consensus 191 ~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 270 (587)
++.+++++|+++ .+..++..+..|.++++.+..... .....+++++|+++|++++
T Consensus 159 ~~~~~~~~Ll~~-~~~~i~~~~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~Li~~ga~~n 213 (285)
T d1wdya_ 159 GHVEVLKILLDE-MGADVNACDNMGRNALIHALLSSD------------------------DSDVEAITHLLLDHGADVN 213 (285)
T ss_dssp TCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHHHHCSC------------------------TTTHHHHHHHHHHTTCCSS
T ss_pred CCHHHHHHHHhc-cCCCcccccCCCCccccccccccc------------------------chHHHHHHHHHHHCCCCCC
Confidence 999999999998 788899999999998887665442 1112679999999999987
Q ss_pred hhhhhhhccCCChHHHHHHHcCcHHHHHHHHHh-CCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhcc
Q 007858 271 HKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRS-YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVD 349 (587)
Q Consensus 271 ~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d 349 (587)
..+ ..|.||||.|++.|+.+++++|+++ +.+ ++.+|.+|+||||+|+++|+.+++++|+++|++++ ++|
T Consensus 214 ~~~-----~~g~t~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n----~~d 283 (285)
T d1wdya_ 214 VRG-----ERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTD----CGD 283 (285)
T ss_dssp CCC-----TTSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC----CSS
T ss_pred ccC-----CCCCCccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----ccc
Confidence 654 3789999999999999999999986 666 79999999999999999999999999999999976 565
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-34 Score=278.32 Aligned_cols=239 Identities=16% Similarity=0.097 Sum_probs=174.9
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCc--ccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHH
Q 007858 108 SLQDENGNTAFCFAAAVGSVEIAQFMLQRNPN--LLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTF 184 (587)
Q Consensus 108 ~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~--l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l 184 (587)
+..|++|+||||+||++|+.+++++|+++|++ ..+.+|..|.||||+|+..|+.+++++|+++++ ++..|.+|.|||
T Consensus 3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL 82 (255)
T d1oy3d_ 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (255)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence 45689999999999999999999999999865 236788999999999999999999999999999 888999999999
Q ss_pred HHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHH
Q 007858 185 FVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWK 264 (587)
Q Consensus 185 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~ 264 (587)
|.|+..++.++++.|++. ..... ............... ........ .+... .............
T Consensus 83 ~~A~~~~~~~~~~~Ll~~-~~~~~----~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~---~~~~~~~~~~~~~ 146 (255)
T d1oy3d_ 83 HLACRVRAHTCACVLLQP-RPSHP----RDASDTYLTQSQDCT-------PDTSHAPA-AVDSQ---PNPENEEEPRDED 146 (255)
T ss_dssp HHHTTTTCHHHHHHHSSS-CCSSC----CCC----------------------------------------------CCC
T ss_pred hhhhccCchHHHHHHHhh-ccchh----cccchhhhhHHhhhc-------ccchHHHH-HHHhh---cchhHHHHHHhhh
Confidence 999999999999999886 22111 111100000000000 00000000 00000 0000011111111
Q ss_pred HhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhh
Q 007858 265 EISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELI 344 (587)
Q Consensus 265 ~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~ 344 (587)
.+..+ ...+..|.||||+|+..|+.+++++|++++++.....+..|.||||+|+..|+.+++++|+++|++++
T Consensus 147 ~~~~i-----n~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin-- 219 (255)
T d1oy3d_ 147 WRLQL-----EAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT-- 219 (255)
T ss_dssp GGGGT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--
T ss_pred cCccc-----ccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCC--
Confidence 12222 23445889999999999999999999999999766678899999999999999999999999999976
Q ss_pred hhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 345 ATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 345 ~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
.+|+.|+||||+|+..++.++++.|
T Consensus 220 --~~d~~g~t~L~~A~~~~~~~i~~~L 244 (255)
T d1oy3d_ 220 --ARMYGGRTPLGSALLRPNPILARLL 244 (255)
T ss_dssp --CCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 7999999999999999998876666
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-34 Score=270.31 Aligned_cols=214 Identities=19% Similarity=0.214 Sum_probs=168.1
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAAL 157 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~ 157 (587)
+++.|+.+|..|+.+.|+.++... +.. ++.+|.+|+||||+|+..|+.+++++|++.+.+. ...+..+.++++.++.
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~-~~~-~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ 79 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILAD-KSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAAS 79 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHC-GGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhC-CCc-CcCcCCCCCCHHHHHHHhhhhccccccccccccc-cccccccccccccccc
Confidence 356666677777766666666554 233 6667777777777777777777777777766664 5555566667777766
Q ss_pred hCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCc
Q 007858 158 FGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWL 237 (587)
Q Consensus 158 ~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~ 237 (587)
.++.+++++|++++ ..++.+|.+|.||||+|+..++
T Consensus 80 ~~~~~i~~~Ll~~~----------------------------------~d~~~~d~~g~tpL~~A~~~~~---------- 115 (223)
T d1uoha_ 80 AGRDEIVKALLGKG----------------------------------AQVNAVNQNGCTPLHYAASKNR---------- 115 (223)
T ss_dssp HTCHHHHHHHHHTT----------------------------------CCTTCCCTTCCCHHHHHHHHTC----------
T ss_pred ccccchhHHHhccC----------------------------------ceeEeeCCCCCchhhHHHHcCC----------
Confidence 66666666666654 3456778889999999998887
Q ss_pred cccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCc
Q 007858 238 KVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRS 317 (587)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t 317 (587)
.+++++|+++|.+++..+ ..|.||||.|+..++.++++.|++.+.+ ++..|.+|+|
T Consensus 116 ------------------~e~~~~Ll~~g~d~~~~~-----~~~~t~L~~a~~~~~~~~~~~L~~~~~~-i~~~d~~g~T 171 (223)
T d1uoha_ 116 ------------------HEIAVMLLEGGANPDAKD-----HYEATAMHRAAAKGNLKMIHILLYYKAS-TNIQDTEGNT 171 (223)
T ss_dssp ------------------HHHHHHHHHTTCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTCCC
T ss_pred ------------------HHHHHHHHHCCCCCCCcC-----CCCCccchhhhhcCCcchhhhhccccce-eeeccCCCCc
Confidence 899999999998877654 4789999999999999999999999999 7999999999
Q ss_pred hHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCC
Q 007858 318 IFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKP 367 (587)
Q Consensus 318 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~ 367 (587)
|||+|+..|+.+++++|+++|++++ .+|.+|+||||+|. .|+.++
T Consensus 172 pL~~Aa~~g~~~~v~~LL~~Gad~~----~~d~~g~tpl~~A~-~~~~~i 216 (223)
T d1uoha_ 172 PLHLACDEERVEEAKLLVSQGASIY----IENKEEKTPLQVAK-GGLGLI 216 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSC----CCCTTSCCHHHHCC-TTHHHH
T ss_pred eeccccccCcHHHHHHHHHCCCCCC----CCCCCCCCHHHHHH-CCCHHH
Confidence 9999999999999999999999976 69999999999984 465443
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.3e-34 Score=282.49 Aligned_cols=145 Identities=10% Similarity=0.103 Sum_probs=118.2
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHH--------HccCCCCccccCCCCC
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMV--------ELTGHDNLLSLQDENG 114 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll--------~~~~~~~ll~~~d~~g 114 (587)
.||||.++..+..+.+..++ .+.+ ++...+++|+||||+||..|+.++|+.|+ +.| ++ +|.+|.+|
T Consensus 1 ~~p~~~~~~~~~~~~~~~~l-~~~~--~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~G--ad-vn~~d~~G 74 (277)
T d2fo1e1 1 ESPIKLHTEAAGSYAITEPI-TRES--VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG--AD-VNAMDCDE 74 (277)
T ss_dssp CCCCHHHHHHHSSSCCCSCC-STTT--TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC--CC-TTCCCTTS
T ss_pred CChHHHHHHhCCCHHHHHHH-HhcC--CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcC--CC-ccccCCCC
Confidence 37888766555555555555 3444 44442457999999999999999998875 445 78 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC----CCCCCCCCchHHHHHHHh
Q 007858 115 NTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE----DNLEPDDLENTFFVSIET 190 (587)
Q Consensus 115 ~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----~~~~~~~g~t~l~~a~~~ 190 (587)
+||||+|++.|+.++|++|+++|+++ +.+|.+|.|||++|+..++.++++++..... .+..+..+.++.+.+...
T Consensus 75 ~TpLh~A~~~g~~~iv~~Ll~~Gad~-n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T d2fo1e1 75 NTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN 153 (277)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHS
T ss_pred Ceeecccccccccccccccccccccc-ccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhc
Confidence 99999999999999999999999995 8999999999999999999999999988764 455778888999888877
Q ss_pred CcHH
Q 007858 191 GLYG 194 (587)
Q Consensus 191 ~~~~ 194 (587)
+..+
T Consensus 154 ~~~~ 157 (277)
T d2fo1e1 154 EGRD 157 (277)
T ss_dssp CSTT
T ss_pred cccc
Confidence 6544
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-33 Score=272.65 Aligned_cols=265 Identities=20% Similarity=0.184 Sum_probs=225.7
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIA 155 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A 155 (587)
+++|+||.|++.|+.++|++|+++| ++ ++.++ ..|.||||+|+..|+.+++++|++.++.. ...+..+.+|.+.+
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G--~d-in~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~-~~~~~~~~~~~~~~ 79 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGG--AN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCC--CC-cCccCCCCCCCHHHHHHHcCCHHHhhhhccccccc-cccccccchhhHHH
Confidence 3679999999999999999999999 88 87664 57999999999999999999999999985 78888999999999
Q ss_pred HHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhc--------ccccccccccCCchHHHHHhhCC
Q 007858 156 ALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKN--------KKLLAGATHAKYGTAMHMLARNP 226 (587)
Q Consensus 156 ~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~--------~~~~~~~~d~~g~t~Lh~a~~~~ 226 (587)
+..+..+...++++... ....+..+.++++.|+..+....+..++... ........+..|.||||+|++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T d1wdya_ 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred hhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcC
Confidence 99999999999999877 5557788999999999999999999888761 11222345667999999999999
Q ss_pred CCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHH-hhccchhhhhhhccCCChHHHHHHH----cCcHHHHHHHH
Q 007858 227 SAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKE-ISKSTHKDVLKLISKPSKLLFDAAH----SGNFKFLAVLT 301 (587)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~Lh~Aa~----~g~~~iv~~Ll 301 (587)
+ .+++++|+++ +.+++..+ ..|.++++.+.. .+..+++++|+
T Consensus 160 ~----------------------------~~~~~~Ll~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~Li 206 (285)
T d1wdya_ 160 H----------------------------VEVLKILLDEMGADVNACD-----NMGRNALIHALLSSDDSDVEAITHLLL 206 (285)
T ss_dssp C----------------------------HHHHHHHHHTSCCCTTCCC-----TTSCCHHHHHHHCSCTTTHHHHHHHHH
T ss_pred C----------------------------HHHHHHHHhccCCCccccc-----CCCCcccccccccccchHHHHHHHHHH
Confidence 7 8999999975 55665443 356666665543 34567999999
Q ss_pred HhCCCccccccCCCCchHHHHHHcCChhHHHHHHhc-CcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCCCCchHHHHH
Q 007858 302 RSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEM-GFDKELIATYVDVSGNNLLHLAAQYSNPKPISKVPGAALEMQQ 380 (587)
Q Consensus 302 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~~~~ 380 (587)
+++++ ++.+|..|+||||+|+..|+.+++++|++. |++++ .+|.+|+||||+|++.|+.++++.|
T Consensus 207 ~~ga~-~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din----~~d~~G~TpL~~A~~~~~~eiv~~L--------- 272 (285)
T d1wdya_ 207 DHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN----DTDSDGKTALLLAVELKLKKIAELL--------- 272 (285)
T ss_dssp HTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT----CCCTTSCCHHHHHHHTTCHHHHHHH---------
T ss_pred HCCCC-CCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCc----CCCCCCCCHHHHHHHcCCHHHHHHH---------
Confidence 99999 699999999999999999999999999975 77765 7999999999999999998876666
Q ss_pred HhhhHHHHHHhcccccccccCC
Q 007858 381 ELKTFKEVETIVKPSFKEMKNN 402 (587)
Q Consensus 381 ~l~~~~~v~~l~~~~~~~~~n~ 402 (587)
+.+|+++|.+|.
T Consensus 273 ----------l~~GAd~n~~d~ 284 (285)
T d1wdya_ 273 ----------CKRGASTDCGDL 284 (285)
T ss_dssp ----------HHHSSCSCCSSC
T ss_pred ----------HHCCCCCCcccC
Confidence 668999999874
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-32 Score=260.84 Aligned_cols=225 Identities=17% Similarity=0.166 Sum_probs=141.2
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
++|||+||..|+.+.++.|+ +..+.+++.+ |.+|.||||+|+..|+.+++++|+++|.+.+..+..+..|.||+|+++
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll-~~~~~~~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 78 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELL-HSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 78 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHH-HHCGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHH-HcCCCccccc-CCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccc
Confidence 35666666666666666666 5555555554 666666666666666666666666665222222345555666666666
Q ss_pred HcCCHHHHHHHHhcCCcc-cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHH
Q 007858 123 AVGSVEIAQFMLQRNPNL-LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLL 200 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 200 (587)
..+..++++.++..+... ....+..+.||++.++..++.+++++|++.+. .+..+.+|+||||.|+..++.++++.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 158 (229)
T d1ixva_ 79 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158 (229)
T ss_dssp HHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccc
Confidence 666666666666555432 23344556666666666666666666666555 3334444444444444444444444444
Q ss_pred HhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccC
Q 007858 201 KKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISK 280 (587)
Q Consensus 201 ~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 280 (587)
+. .+...+.+| ..
T Consensus 159 ~~-~~~~in~~d------------------------------------------------------------------~~ 171 (229)
T d1ixva_ 159 GL-GKSAVNWQD------------------------------------------------------------------KQ 171 (229)
T ss_dssp TT-TCCCSCCCC------------------------------------------------------------------TT
T ss_pred cc-ccccccccc------------------------------------------------------------------cc
Confidence 43 222222222 35
Q ss_pred CChHHHHHHHcCcHHHHHHHHHh-CCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcc
Q 007858 281 PSKLLFDAAHSGNFKFLAVLTRS-YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFD 340 (587)
Q Consensus 281 g~t~Lh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~ 340 (587)
|.||||+|+..|+.+++++|+++ |++ ++.+|.+|+||||+|+. .+++++|+++|+|
T Consensus 172 g~TpLh~A~~~~~~~~v~~Ll~~~gad-~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d 228 (229)
T d1ixva_ 172 GWTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVALN---EQVKKFFLNNVVD 228 (229)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHCCC-SCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred cCCchhhhcccccHHHHHHHHHhcCCC-CCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence 67777778888888999999964 788 68999999999999984 5899999999986
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=7e-34 Score=279.59 Aligned_cols=235 Identities=18% Similarity=0.201 Sum_probs=182.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
++.|+||.||+.|+.++|++|+++| ++ ++.+|.+|.||||+|+..|+.++|++|+++|++. ...+..+.|||+.|+
T Consensus 39 ~~~t~l~~A~~~G~~~~v~~Ll~~G--ad-vn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L~~a~ 114 (291)
T d1s70b_ 39 DDGAVFLAACSSGDTEEVLRLLERG--AD-INYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAA 114 (291)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHC--CC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCchHHHHHHHcCCHHHHHHHHHCC--CC-CCccCCCCCcHHHHHHhcCCceeeeeeccccccc-ccccccccccccccc
Confidence 4568888888888888888888888 77 8888888888888888888888888888888874 777788888888888
Q ss_pred HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCC
Q 007858 157 LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPG 235 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~ 235 (587)
..++.++++.|++++. .+..+.++.++++.|+..+..+.+..++.. .+.........+..+.+.
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~-------------- 179 (291)
T d1s70b_ 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR-QGVDIEAARKEEERIMLR-------------- 179 (291)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH-HTCCHHHHHHHHHHHHHH--------------
T ss_pred cccccchhhcccccCcccccccccCccccccccccccchhccccccc-cccccccccccccccccc--------------
Confidence 8888888888888887 667788888888888888888888888766 232222211111111111
Q ss_pred CccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCC
Q 007858 236 WLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENG 315 (587)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 315 (587)
.....+........ .....|.||||.|+..|+.++++.|++++++ ++.+|.+|
T Consensus 180 ---------------------~~~~~~~~~~~~~~-----~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d-in~~~~~g 232 (291)
T d1s70b_ 180 ---------------------DARQWLNSGHINDV-----RHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDG 232 (291)
T ss_dssp ---------------------HHHHHHHHTCCCCC-----CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTC
T ss_pred ---------------------cchhhhcccccccc-----cccCCCCChhhHHHHcCChhhhcccccceec-ccccccCC
Confidence 11111111111111 2234779999999999999999999999999 79999999
Q ss_pred CchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHH
Q 007858 316 RSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQ 361 (587)
Q Consensus 316 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~ 361 (587)
+||||+|+..|+.+++++|+++|++++ .+|+.|+||||+|++
T Consensus 233 ~TpL~~A~~~g~~~iv~lLl~~Gadv~----~~d~~G~TaL~~A~e 274 (291)
T d1s70b_ 233 WTPLHAAAHWGKEEACRILVENLCDME----AVNKVGQTAFDVADE 274 (291)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCTTTSCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC----CcCCCCCCHHHHHHH
Confidence 999999999999999999999999976 699999999999975
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.7e-34 Score=280.27 Aligned_cols=258 Identities=15% Similarity=0.177 Sum_probs=207.2
Q ss_pred CcHHHHHHh-cCCHHHHHHHHHccCCCCccccCC-CCCCcHHHHHHHcCCHHHHHHH--------HhcCCcccccCCCCC
Q 007858 79 QTILHVATG-AKQTNFVKQMVELTGHDNLLSLQD-ENGNTAFCFAAAVGSVEIAQFM--------LQRNPNLLTIRGGGQ 148 (587)
Q Consensus 79 ~t~Lh~A~~-~g~~~iv~~Ll~~~~~~~ll~~~d-~~g~TpLh~Aa~~g~~~iv~~L--------l~~~~~l~~~~~~~g 148 (587)
+||||+|++ .|+.++++.|.+.+ ++..| .+|+||||+||..|+.++|+.| +++|+++ +.+|.+|
T Consensus 1 ~~p~~~~~~~~~~~~~~~~l~~~~-----~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadv-n~~d~~G 74 (277)
T d2fo1e1 1 ESPIKLHTEAAGSYAITEPITRES-----VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDE 74 (277)
T ss_dssp CCCCHHHHHHHSSSCCCSCCSTTT-----TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTS
T ss_pred CChHHHHHHhCCCHHHHHHHHhcC-----CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCc-cccCCCC
Confidence 589997765 46667777776665 44444 4699999999999999988877 5668896 8999999
Q ss_pred CcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhc-ccccccccccCCchHHHHHhhCC
Q 007858 149 MTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKN-KKLLAGATHAKYGTAMHMLARNP 226 (587)
Q Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~d~~g~t~Lh~a~~~~ 226 (587)
.||||+|+..|+.+++++|+++|+ ++..+.+|.|+++.|+..++.++...+.... .....+..+..+.++.+.+....
T Consensus 75 ~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
T d2fo1e1 75 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 154 (277)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred CeeeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcc
Confidence 999999999999999999999999 8889999999999999999999998887651 12344567888999999988766
Q ss_pred CCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccch---hhhhhhccCCChHHHHHHHcCcHHHHHHHHHh
Q 007858 227 SAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTH---KDVLKLISKPSKLLFDAAHSGNFKFLAVLTRS 303 (587)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~---~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~ 303 (587)
.. .....++.+.+....... ......+..|.||||.++..++.++++.++..
T Consensus 155 ~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~ 209 (277)
T d2fo1e1 155 GR-------------------------DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 209 (277)
T ss_dssp ST-------------------------THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH
T ss_pred cc-------------------------cccccccccccccccccccccccccccccCCCCcccccccccccccccccccc
Confidence 31 113444444444332211 11223345789999999999999999988876
Q ss_pred CCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 304 YPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 304 ~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
.+...+..|..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|++.|+.++++.|
T Consensus 210 ~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin----~~d~~G~T~L~~A~~~~~~~iv~lL 273 (277)
T d2fo1e1 210 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE----AVDATDHTARQLAQANNHHNIVDIF 273 (277)
T ss_dssp SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS----CCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC----CcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 665578899999999999999999999999999999965 7999999999999999997766554
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.7e-32 Score=259.55 Aligned_cols=213 Identities=21% Similarity=0.233 Sum_probs=172.0
Q ss_pred CcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcc--cccCCCCCCcHHHHHH
Q 007858 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNL--LTIRGGGQMTPLYIAA 156 (587)
Q Consensus 79 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l--~~~~~~~g~tpL~~A~ 156 (587)
+||||+||..|+.++|+.|++.. +.+ ++.+|.+|+||||+|+..|+.+++++|+++|+++ ....+..|.+|+|+++
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~-~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 78 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSK-PSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 78 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHC-GGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHHcC-CCc-ccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccc
Confidence 58999999999999999999876 345 8999999999999999999999999999998874 2456778999999999
Q ss_pred HhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCC
Q 007858 157 LFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGW 236 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~ 236 (587)
..+..++++.++..+. .......+..+.|+++.++..++
T Consensus 79 ~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~l~~~~~~~~--------- 117 (229)
T d1ixva_ 79 SVGNLEVVKSLYDRPL--------------------------------KPDLNKITNQGVTCLHLAVGKKW--------- 117 (229)
T ss_dssp HHTCHHHHHHHHSSSS--------------------------------CCCTTCCCTTSCCHHHHHHHTTC---------
T ss_pred cccccccccccccccc--------------------------------cccccccccccccccccccccch---------
Confidence 9999999998888775 11122334445555555555554
Q ss_pred ccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC
Q 007858 237 LKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGR 316 (587)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 316 (587)
.++++.|++.+...+..+ ..|.||||.|+..|+.+++++|++.+++.++.+|.+|+
T Consensus 118 -------------------~~~~~~l~~~~~~~~~~~-----~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~ 173 (229)
T d1ixva_ 118 -------------------FEVSQFLIENGASVRIKD-----KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW 173 (229)
T ss_dssp -------------------HHHHHHHHHTTCCSCCCC-----TTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred -------------------hhhhhhhhhhcccccccC-----CCCCCccchhhhcccccccccccccccccccccccccC
Confidence 555555555555444333 36688888899999999999999998776899999999
Q ss_pred chHHHHHHcCChhHHHHHHh-cCcchhhhhhhccCCCCcHHHHHHHc
Q 007858 317 SIFHIAVMHRHADTFKLIYE-MGFDKELIATYVDVSGNNLLHLAAQY 362 (587)
Q Consensus 317 t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLhlA~~~ 362 (587)
||||+|+.+|+.+++++|++ .|++++ .+|++|+||||+|+..
T Consensus 174 TpLh~A~~~~~~~~v~~Ll~~~gad~~----~~d~~g~t~l~~A~~~ 216 (229)
T d1ixva_ 174 TPLFHALAEGHGDAAVLLVEKYGAEYD----LVDNKGAKAEDVALNE 216 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHCCCSC----CCCTTSCCTGGGCSCH
T ss_pred CchhhhcccccHHHHHHHHHhcCCCCC----CcCCCCCCHHHHHhhH
Confidence 99999999999999999997 599876 6999999999999743
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.98 E-value=1.9e-32 Score=269.22 Aligned_cols=252 Identities=21% Similarity=0.195 Sum_probs=209.0
Q ss_pred CcccCCCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCC
Q 007858 36 KKQYSHKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGN 115 (587)
Q Consensus 36 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~ 115 (587)
.+....+.|+|+.||..|+.++|+.|+ +.|++++.. |.+|.||||+|+..|+.++|++|++++ .+ ....+..+.
T Consensus 34 ~~~~~~~~t~l~~A~~~G~~~~v~~Ll--~~Gadvn~~-d~~G~T~L~~A~~~g~~eiv~~Ll~~~--~~-~~~~~~~~~ 107 (291)
T d1s70b_ 34 TKVKFDDGAVFLAACSSGDTEEVLRLL--ERGADINYA-NVDGLTALHQACIDDNVDMVKFLVENG--AN-INQPDNEGW 107 (291)
T ss_dssp CCCEECHHHHHHHHHHHTCHHHHHHHH--HHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSC
T ss_pred cccCCCCchHHHHHHHcCCHHHHHHHH--HCCCCCCcc-CCCCCcHHHHHHhcCCceeeeeecccc--cc-ccccccccc
Confidence 455667889999999999999999999 678899887 999999999999999999999999998 77 788899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHH
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGL 195 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~ 195 (587)
||||.|+..++.++++.|+++|... ...|..|.+|+++|+..++.+.++.++....... ...............
T Consensus 108 ~~L~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~-----~~~~~~~~~~~~~~~ 181 (291)
T d1s70b_ 108 IPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI-----EAARKEEERIMLRDA 181 (291)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH-----HHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhcccccCccc-ccccccCccccccccccccchhcccccccccccc-----ccccccccccccccc
Confidence 9999999999999999999999885 8899999999999999999999999997654110 000000000011112
Q ss_pred HHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhh
Q 007858 196 ALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVL 275 (587)
Q Consensus 196 v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 275 (587)
...+.. ........+..|.||||.|+..++ .++++.|++.|.+++..+
T Consensus 182 ~~~~~~--~~~~~~~~~~~g~t~L~~a~~~~~----------------------------~~~~~~Ll~~g~din~~~-- 229 (291)
T d1s70b_ 182 RQWLNS--GHINDVRHAKSGGTALHVAAAKGY----------------------------TEVLKLLIQARYDVNIKD-- 229 (291)
T ss_dssp HHHHHH--TCCCCCCCTTTCCCHHHHHHHHTC----------------------------HHHHHHHHTTTCCTTCCC--
T ss_pred hhhhcc--cccccccccCCCCChhhHHHHcCC----------------------------hhhhcccccceecccccc--
Confidence 222222 244556678889999999999997 999999999999887654
Q ss_pred hhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCc
Q 007858 276 KLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGF 339 (587)
Q Consensus 276 ~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~ 339 (587)
..|.||||+|+..|+.+++++|+++|+| ++.+|.+|+||||+|++ +++++|.+...
T Consensus 230 ---~~g~TpL~~A~~~g~~~iv~lLl~~Gad-v~~~d~~G~TaL~~A~e----~~~~~L~~~~~ 285 (291)
T d1s70b_ 230 ---YDGWTPLHAAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADE----DILGYLEELQK 285 (291)
T ss_dssp ---TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTTTSCCS----GGGHHHHHHHH
T ss_pred ---cCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH----HHHHHHHHHhh
Confidence 4789999999999999999999999999 79999999999999975 68888876644
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.8e-30 Score=242.21 Aligned_cols=217 Identities=14% Similarity=0.087 Sum_probs=165.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHH----ccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHH
Q 007858 77 GYQTILHVATGAKQTNFVKQMVE----LTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPL 152 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~~Ll~----~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL 152 (587)
+|+||||+||+.|+.++|+.|++ .+ .+ ++.+|.+|+||||+|+..|+.+++++|+++|++. +..+..|.+++
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g--~~-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~ 77 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGG--RE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAA 77 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTT--CC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCC--CC-CCccCCCCCccceehhcccccccccccccccccc-ccccccccccc
Confidence 68999999999999999988875 44 77 8899999999999999999999999999999885 88888999999
Q ss_pred HHHHHhCChHHHHHHhhcCC-----CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 153 YIAALFGQSKMASFLYRQNE-----DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 153 ~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
+.|...++.++++.+..... .+.......++++.+...........|...
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~------------------------- 132 (228)
T d1k1aa_ 78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER------------------------- 132 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------------------------
T ss_pred ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhcc-------------------------
Confidence 99999999988888776654 222344445555555555555544444443
Q ss_pred CcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCc
Q 007858 228 AFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDL 307 (587)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~ 307 (587)
..+.... ....|.+|++.|+..+..++++.+++++.+
T Consensus 133 --------------------------------------~~~~~~~----~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~- 169 (228)
T d1k1aa_ 133 --------------------------------------GADIDAV----DIKSGRSPLIHAVENNSLSMVQLLLQHGAN- 169 (228)
T ss_dssp --------------------------------------TCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred --------------------------------------ccccccc----cccchhhHHHHHHHhhhhhhhhhhhhhccc-
Confidence 2211111 112457778888888888888888888777
Q ss_pred cccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhhhccCCCCcHHHHHHHcCCCCCCC
Q 007858 308 VHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIATYVDVSGNNLLHLAAQYSNPKPIS 369 (587)
Q Consensus 308 ~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLhlA~~~~~~~~~~ 369 (587)
.+.+|..|.||||+|+.+|+.+++++|+++|+|++ .+|.+|+||||+|++.|+.++++
T Consensus 170 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n----~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 170 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS----LKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCTTTTCSSHHHHHHHT
T ss_pred cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHhCCCccccC
Confidence 57788888888888888888888888888888865 68888888888888887766543
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.2e-30 Score=240.98 Aligned_cols=191 Identities=16% Similarity=0.097 Sum_probs=159.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh----cCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHH
Q 007858 112 ENGNTAFCFAAAVGSVEIAQFMLQ----RNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFV 186 (587)
Q Consensus 112 ~~g~TpLh~Aa~~g~~~iv~~Ll~----~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~ 186 (587)
++|+||||+||+.|+.++++.|++ .|+++ +.+|.+|.||||+|+..|+.+++++|+++++ .+..+.++.++++.
T Consensus 1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~i-n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 79 (228)
T d1k1aa_ 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 79 (228)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CccCCCCCccceehhccccccccccccccccccccccccccccccc
Confidence 469999999999999999998885 68886 8999999999999999999999999999998 77788888888888
Q ss_pred HHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHh
Q 007858 187 SIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEI 266 (587)
Q Consensus 187 a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~ 266 (587)
|...+..+.++.+... ........
T Consensus 80 a~~~~~~~~~~~~~~~-~~~~~~~~------------------------------------------------------- 103 (228)
T d1k1aa_ 80 ACEHRSPTCLRALLDS-AAPGTLDL------------------------------------------------------- 103 (228)
T ss_dssp HHHTTCHHHHHHHHHH-SCTTSCCT-------------------------------------------------------
T ss_pred ccccccccchhhhhhc-cccccccc-------------------------------------------------------
Confidence 8888888877776665 11000000
Q ss_pred hccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCChhHHHHHHhcCcchhhhhh
Q 007858 267 SKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLIYEMGFDKELIAT 346 (587)
Q Consensus 267 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~ 346 (587)
+ .....+.++++.+.........+.|.....+.....+..|.++||.|+..+..++++.++++|.+.+
T Consensus 104 ---~-----~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~---- 171 (228)
T d1k1aa_ 104 ---E-----ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN---- 171 (228)
T ss_dssp ---T-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----
T ss_pred ---c-----ccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccc----
Confidence 0 0012347888888888889999999988888666778899999999999999999999999998865
Q ss_pred hccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 347 YVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 347 ~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
.+|..|+||||+|+..|+.++++.|
T Consensus 172 ~~d~~g~t~L~~A~~~g~~~~v~~L 196 (228)
T d1k1aa_ 172 AQMYSGSSALHSASGRGLLPLVRTL 196 (228)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHH
T ss_pred cccccCcchHHHHHHcCCHHHHHHH
Confidence 7999999999999999998877766
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.1e-30 Score=243.79 Aligned_cols=199 Identities=17% Similarity=0.147 Sum_probs=165.4
Q ss_pred CCCcHHHHHHhcCCHHHHH----HHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHH
Q 007858 77 GYQTILHVATGAKQTNFVK----QMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPL 152 (587)
Q Consensus 77 ~g~t~Lh~A~~~g~~~iv~----~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL 152 (587)
+|+||||+|+..|+.++++ .+...+ .+ ++.+|.+|+||||+|++.|+.+++++|+++|+++ +.+|..|.|||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~--~~-in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l 76 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDL--AF-LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 76 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----C--CC-CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCC--CC-cccCCCCCCccccccccccccccccccccccccc-ccccccccccc
Confidence 5899999999999865544 455555 77 8999999999999999999999999999999995 88999999999
Q ss_pred HHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCccc
Q 007858 153 YIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTS 231 (587)
Q Consensus 153 ~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~ 231 (587)
|.|+..++.++++.|++.+. .. ...........|.||||.|+..++
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~-----------------------------~~~~~~~~~~~~~t~l~~a~~~~~---- 123 (221)
T d1iknd_ 77 HLACEQGCLASVGVLTQSCTTPH-----------------------------LHSILKATNYNGHTCLHLASIHGY---- 123 (221)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTS-----------------------------SSCGGGCCCTTCCCHHHHHHHTTC----
T ss_pred ccccccccccccchhhhhccccc-----------------------------ccccccccccccchhhhHHhhcCC----
Confidence 99999999999999998775 11 122333455668888888888876
Q ss_pred CCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccc
Q 007858 232 NCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQL 311 (587)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~ 311 (587)
.+.++++++.+...+..+. .+|.||||.|++.|+.+++++|+++|+| ++.+
T Consensus 124 ------------------------~~~~~~l~~~~~~~~~~~~----~~G~T~L~~A~~~g~~~~v~~Ll~~gad-~~~~ 174 (221)
T d1iknd_ 124 ------------------------LGIVELLVSLGADVNAQEP----CNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRV 174 (221)
T ss_dssp ------------------------HHHHHHHHHHTCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCC
T ss_pred ------------------------hhheeeecccCcccccccc----cCCCCccccccccccHHHHHHHHhcCCc-cccc
Confidence 8888888888877665432 4689999999999999999999999999 7999
Q ss_pred cCCCCchHHHHHHcCChhHHHHHHhcCcch
Q 007858 312 DENGRSIFHIAVMHRHADTFKLIYEMGFDK 341 (587)
Q Consensus 312 d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 341 (587)
|.+|+||||+|+..++.+++++|++.+.+.
T Consensus 175 ~~~G~tpl~~A~~~~~~~~~~~l~~~~~~~ 204 (221)
T d1iknd_ 175 TYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204 (221)
T ss_dssp CTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCcc
Confidence 999999999999999999999999987653
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.96 E-value=1.5e-28 Score=228.79 Aligned_cols=204 Identities=20% Similarity=0.235 Sum_probs=123.3
Q ss_pred HHHHHHHHHccCCCCcccc-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhh
Q 007858 91 TNFVKQMVELTGHDNLLSL-QDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169 (587)
Q Consensus 91 ~~iv~~Ll~~~~~~~ll~~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (587)
.|+|++|+++| ++ ++. .|.+|.||||+||..|+.+++++|++.|+++ +.++..+.++++.++..++.+.......
T Consensus 2 ~~~v~~Ll~~g--~d-in~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (209)
T d1ot8a_ 2 AQVISDLLAQG--AE-LNATMDKTGETSLHLAARFARADAAKRLLDAGADA-NSQDNTGRTPLHAAVAADAMGVFQILLR 77 (209)
T ss_dssp HHHHHHHHHHH--HH-HHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHCC--CC-cCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccc-cccccccccccccccccccccccccccc
Confidence 36677777776 66 655 4667777777777777777777777777764 6667777777777777666665555544
Q ss_pred cCC--CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhc
Q 007858 170 QNE--DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITN 247 (587)
Q Consensus 170 ~~~--~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
... .......+.++.+.+.........+.|... +...+.++..|.|||+.++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~~~~~~~~t~l~~~~~~~~-------------------- 135 (209)
T d1ot8a_ 78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITA--DADINAADNSGKTALHWAAAVNN-------------------- 135 (209)
T ss_dssp CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTC--------------------
T ss_pred ccccccccccccccccccccccccchhhhhhhhhh--cccccccCCCCCCcchhhcccCc--------------------
Confidence 443 222444455555555555555555555544 44455555666666666665554
Q ss_pred cCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCchHHHHHHcCC
Q 007858 248 NTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAVLTRSYPDLVHQLDENGRSIFHIAVMHRH 327 (587)
Q Consensus 248 ~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 327 (587)
.++++.+++.+.+++..+ ..|.||||.|+..|+.++++.|+++|+| ++.+|.+|+||||+|+++|+
T Consensus 136 --------~~~~~~l~~~~~~~~~~d-----~~g~TpL~~A~~~g~~~~v~~Ll~~gad-~n~~d~~g~Tpl~~A~~~~~ 201 (209)
T d1ot8a_ 136 --------TEAVNILLMHHANRDAQD-----DKDETPLFLAAREGSYEASKALLDNFAN-REITDHMDRLPRDVASERLH 201 (209)
T ss_dssp --------HHHHHHHHHTTCCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred --------ceeeeeeccccccccccc-----cccccccchhccccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCC
Confidence 555555555555444332 2456666666666666666666666666 46666666666666666666
Q ss_pred hhHHHHH
Q 007858 328 ADTFKLI 334 (587)
Q Consensus 328 ~~iv~~L 334 (587)
.++|++|
T Consensus 202 ~~iv~lL 208 (209)
T d1ot8a_ 202 HDIVRLL 208 (209)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 6666654
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.95 E-value=2.2e-30 Score=260.33 Aligned_cols=229 Identities=10% Similarity=0.058 Sum_probs=118.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHH---HHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCC--CCCC
Q 007858 75 TKGYQTILHVATGAKQTNFVKQ---MVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRG--GGQM 149 (587)
Q Consensus 75 ~~~g~t~Lh~A~~~g~~~iv~~---Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~--~~g~ 149 (587)
+..|.||||+||+.||.+++++ |++.+ ++ ++.+|.+|.||||+||++||.++|++|++.|+++ +..+ .+|.
T Consensus 87 ~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~--~~-in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~~~g~ 162 (346)
T d2ajaa1 87 GIKSEVICFVAAITGCSSALDTLCLLLTSD--EI-VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQAENY 162 (346)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CC--SS-CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHSHHHH
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHHHhCC--Cc-ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccccCCC
Confidence 4555555555555555554443 44444 55 5555555555555555555555555555555553 3332 2355
Q ss_pred cHHHHHHHhCChHHHHHHhhcCC-C---CCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccC-------CchH
Q 007858 150 TPLYIAALFGQSKMASFLYRQNE-D---NLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAK-------YGTA 218 (587)
Q Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~-~---~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~-------g~t~ 218 (587)
||||+|+.+||.++|++|++.++ . +..+.++.||++.|+.+|+.+++++|++. ++..+..+.. +.++
T Consensus 163 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~ 240 (346)
T d2ajaa1 163 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC--PVMLAYAEIHEFEYGEKYVNP 240 (346)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS--HHHHHHHHHCTTTTTTTTHHH
T ss_pred ChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhC--CCCcchHHHHHHHcCcHhhhH
Confidence 55555555555555555555554 1 12333445555555555555555555554 3322211111 1111
Q ss_pred HHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhh----ccchhhhhhhccCCChHHHHHHHcCcH
Q 007858 219 MHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS----KSTHKDVLKLISKPSKLLFDAAHSGNF 294 (587)
Q Consensus 219 Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ 294 (587)
++.+...+. .+....+..... ++...........+.++++.|+..|+.
T Consensus 241 ~~~~~~~~~----------------------------~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~l 292 (346)
T d2ajaa1 241 FIARHVNRL----------------------------KEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLL 292 (346)
T ss_dssp HHHHHHHHH----------------------------HHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGH
T ss_pred HHHHhhccc----------------------------hHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChH
Confidence 111111100 000000000000 000001111111236889999999999
Q ss_pred HHHHHHHHhCCCc----cccccCCCCchHHHHHHcCChhHHHHHHhc
Q 007858 295 KFLAVLTRSYPDL----VHQLDENGRSIFHIAVMHRHADTFKLIYEM 337 (587)
Q Consensus 295 ~iv~~Ll~~~~~~----~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 337 (587)
+++++|++.+... .+..+.+|+||||+|++.|+.+++++|++.
T Consensus 293 d~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 293 DDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp HHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred HHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 9999999876532 234456799999999999999999999975
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.6e-28 Score=229.37 Aligned_cols=192 Identities=17% Similarity=0.120 Sum_probs=169.5
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhh---cCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGD---DHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTA 117 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~---~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~Tp 117 (587)
+|+||||+|+..|+.+++..++ + ..+.+++.+ |.+|+||||+|+..|+.+++++|++.| ++ ++.+|..|.||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li-~~~~~~~~~in~~-d~~g~TpLh~A~~~~~~~iv~~L~~~g--~d-~~~~d~~g~t~ 75 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVI-RQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAG--CD-PELRDFRGNTP 75 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCC-C-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCC--CC-SCCCCTTCCCH
T ss_pred CCChHHHHHHHcCCHHHHHHHH-HHHHhCCCCcccC-CCCCCcccccccccccccccccccccc--cc-ccccccccccc
Confidence 5899999999999987766655 3 456788877 999999999999999999999999999 88 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcc-----cccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCC-CCCCCchHHHHHHHh
Q 007858 118 FCFAAAVGSVEIAQFMLQRNPNL-----LTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNL-EPDDLENTFFVSIET 190 (587)
Q Consensus 118 Lh~Aa~~g~~~iv~~Ll~~~~~l-----~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~-~~~~g~t~l~~a~~~ 190 (587)
||.|+..|+.++++.|++.+... .......|.||||.|+..++.+++++|++.+. .+. .+.+|.||||.|++.
T Consensus 76 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~ 155 (221)
T d1iknd_ 76 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 155 (221)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred cccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccc
Confidence 99999999999999999876442 34456678999999999999999999999998 443 567899999999999
Q ss_pred CcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhh
Q 007858 191 GLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEIS 267 (587)
Q Consensus 191 ~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~ 267 (587)
|+.++++.|++. +++++.+|.+|+||||+|+..++ .++++.|.+...
T Consensus 156 g~~~~v~~Ll~~--gad~~~~~~~G~tpl~~A~~~~~----------------------------~~~~~~l~~~~~ 202 (221)
T d1iknd_ 156 QNPDLVSLLLKC--GADVNRVTYQGYSPYQLTWGRPS----------------------------TRIQQQLGQLTL 202 (221)
T ss_dssp TCHHHHHHHHTT--TCCSCCCCTTCCCGGGGCTTSSC----------------------------HHHHHHHHTTSC
T ss_pred ccHHHHHHHHhc--CCcccccCCCCCCHHHHHHHCCC----------------------------HHHHHHHHHcCC
Confidence 999999999987 88999999999999999999987 899998887654
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.94 E-value=9.3e-27 Score=216.40 Aligned_cols=206 Identities=20% Similarity=0.183 Sum_probs=187.8
Q ss_pred HHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007858 55 CNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFML 134 (587)
Q Consensus 55 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll 134 (587)
-|+|+.|+ +++.+++...|.+|.||||+||..|+.+++++|++.+ ++ ++.++..+.++++.++..++.+......
T Consensus 2 ~~~v~~Ll--~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g--~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (209)
T d1ot8a_ 2 AQVISDLL--AQGAELNATMDKTGETSLHLAARFARADAAKRLLDAG--AD-ANSQDNTGRTPLHAAVAADAMGVFQILL 76 (209)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHH--HCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhc--cc-cccccccccccccccccccccccccccc
Confidence 47899999 7899998866899999999999999999999999998 88 8999999999999999999999888887
Q ss_pred hcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccc
Q 007858 135 QRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHA 213 (587)
Q Consensus 135 ~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~ 213 (587)
.............|.++.+.+.........+.|.+.+. .+..+..|.|+++.++..+..++++.+++. +...+..|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~--~~~~~~~d~ 154 (209)
T d1ot8a_ 77 RNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMH--HANRDAQDD 154 (209)
T ss_dssp TCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCT
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccc--ccccccccc
Confidence 77666556667788999999999999999999999988 778899999999999999999999999998 777889999
Q ss_pred CCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCc
Q 007858 214 KYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGN 293 (587)
Q Consensus 214 ~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~ 293 (587)
+|.||||+|+..|+ .++++.|++.|++++..+ ..|.||||+|+++|+
T Consensus 155 ~g~TpL~~A~~~g~----------------------------~~~v~~Ll~~gad~n~~d-----~~g~Tpl~~A~~~~~ 201 (209)
T d1ot8a_ 155 KDETPLFLAAREGS----------------------------YEASKALLDNFANREITD-----HMDRLPRDVASERLH 201 (209)
T ss_dssp TCCCHHHHHHHTTC----------------------------HHHHHHHHHTTCCTTCCC-----TTSCCHHHHHHHTTC
T ss_pred ccccccchhccccH----------------------------HHHHHHHHHCCCCCCCcC-----CCCCCHHHHHHHcCC
Confidence 99999999999998 999999999999887654 488999999999999
Q ss_pred HHHHHHH
Q 007858 294 FKFLAVL 300 (587)
Q Consensus 294 ~~iv~~L 300 (587)
.+++++|
T Consensus 202 ~~iv~lL 208 (209)
T d1ot8a_ 202 HDIVRLL 208 (209)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 9999976
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.94 E-value=6.4e-29 Score=249.54 Aligned_cols=235 Identities=12% Similarity=0.036 Sum_probs=176.1
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHH---HHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCC--CCCC
Q 007858 107 LSLQDENGNTAFCFAAAVGSVEIAQF---MLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLE--PDDL 180 (587)
Q Consensus 107 l~~~d~~g~TpLh~Aa~~g~~~iv~~---Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~--~~~g 180 (587)
++.++..|.||||+||++||.+++++ |++.|+++ +.+|.+|.||||+||++||.++|++|++.++ .+.. +.+|
T Consensus 83 ~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~i-n~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g 161 (346)
T d2ajaa1 83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN 161 (346)
T ss_dssp HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSC-C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH
T ss_pred HHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcc-cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCC
Confidence 45567789999999999999887765 78899996 8899999999999999999999999999998 5544 3568
Q ss_pred chHHHHHHHhCcHHHHHHHHHhcccc--cccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHH
Q 007858 181 ENTFFVSIETGLYGLALQLLKKNKKL--LAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALEL 258 (587)
Q Consensus 181 ~t~l~~a~~~~~~~~v~~Ll~~~~~~--~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (587)
.||||+|+..|+.+++++|++. .+. ..+..+.+|.||+|.|+.+|+ .++
T Consensus 162 ~t~L~~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~t~l~~A~~~g~----------------------------~~i 212 (346)
T d2ajaa1 162 YHAFRLAAENGHLHVLNRLCEL-APTEATAMIQAENYYAFRWAAVGRGH----------------------------HNV 212 (346)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHS-CGGGHHHHHHHHHHHHHHHHHSTTCC----------------------------HHH
T ss_pred CChhHHHHHHhhHHHHHHHHHc-CCcccccccccCCCcchhhHHhhcCH----------------------------HHH
Confidence 9999999999999999999997 222 234455677889999999998 999
Q ss_pred HHHHHHHhhccchhhhhh--hccCCChHHHHHHHcCcHHHHHHHHHhCCCc-ccccc-------CCCCchHHHHHHcCCh
Q 007858 259 VKCLWKEISKSTHKDVLK--LISKPSKLLFDAAHSGNFKFLAVLTRSYPDL-VHQLD-------ENGRSIFHIAVMHRHA 328 (587)
Q Consensus 259 v~~Ll~~~~~~~~~~~~~--~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~-~~~~d-------~~g~t~Lh~A~~~~~~ 328 (587)
+++|++.|++.+...... ....+.++++.+...+..+....+....++. .+..+ ..+.++++.|+..++.
T Consensus 213 v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~l 292 (346)
T d2ajaa1 213 INFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLL 292 (346)
T ss_dssp HHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGH
T ss_pred HHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChH
Confidence 999999998765443211 1123356777777666666555554433321 11111 1245788999999999
Q ss_pred hHHHHHHhcCcchhh-hhhhccCCCCcHHHHHHHcCCCCCCCCC
Q 007858 329 DTFKLIYEMGFDKEL-IATYVDVSGNNLLHLAAQYSNPKPISKV 371 (587)
Q Consensus 329 ~iv~~Ll~~g~~~~~-~~~~~d~~G~TpLhlA~~~~~~~~~~~l 371 (587)
+++++|++.+..... ..+..+.+|+||||+|++.|+.+++++|
T Consensus 293 d~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lL 336 (346)
T d2ajaa1 293 DDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336 (346)
T ss_dssp HHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHH
T ss_pred HHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHH
Confidence 999999998765431 1234567899999999999999987776
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.5e-25 Score=194.87 Aligned_cols=152 Identities=19% Similarity=0.233 Sum_probs=140.9
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
..|+.||..|+.+.|+.|+ ++.+.+++.. |..|.||||+|+. |+.+++++|++++ .+ ++.++..|.+||+.++.
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL-~~~~~~~n~~-d~~g~t~L~~A~~-~~~~~v~~Ll~~~--~~-~~~~~~~~~~~l~~~~~ 77 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLL-HRELVHPDAL-NRFGKTALQVMMF-GSTAIALELLKQG--AS-PNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHH-HTTCCCTTCC-CTTSCCHHHHSCT-TCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH-HhCCCCCCcc-CCCCCcccccccc-ccccccccccccc--cc-ccccccccccccccccc
Confidence 4599999999999999999 7778899887 9999999999874 8899999999998 88 89999999999999999
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 124 VGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 124 ~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
.++.+++++++++++++ +.+|.+|.||||+|+..|+.+++++|++....+..|.+|.||||+|+..|+.++++.|+++
T Consensus 78 ~~~~~~~~~~l~~~~~~-n~~~~~~~t~L~~A~~~~~~~i~~~L~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 78 TGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ccccccccccccccccc-ccccCCCCeeeccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 99999999999999996 8899999999999999999999999985433888999999999999999999999999875
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=3.7e-25 Score=195.39 Aligned_cols=151 Identities=19% Similarity=0.199 Sum_probs=116.9
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
++||.||..|+.++|+.|+ +++.+++.. |.+|.||||+|+ .|+.+++++|++.+ ++ ++.++..|.+||+.++.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll--~~g~d~n~~-d~~g~TpL~~A~-~~~~ei~~~Ll~~~--a~-~~~~~~~~~~~l~~~~~ 75 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLL--QNNVNVNAQ-NGFGRTALQVMK-LGNPEIARRLLLRG--AN-PDLKDRTGFAVIHDAAR 75 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHT--TSCCCTTCC-CTTSCCHHHHCC-SSCHHHHHHHHHTT--CC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH--HCCCCcCcc-CCcccccccccc-cccccccccccccc--cc-cccccccCccccccccc
Confidence 6788888888888888888 567777766 778888888665 67788888888877 77 77778888888888888
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC--CCCCCCCCchHHHHHHHhCcHHHHHHHHH
Q 007858 124 VGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE--DNLEPDDLENTFFVSIETGLYGLALQLLK 201 (587)
Q Consensus 124 ~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 201 (587)
.++.+.++.|++.+.++ +..|..|.+|||+|+..++.+++++|+++++ .+..+.+|.||||+|+..++.+++++|++
T Consensus 76 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~ 154 (156)
T d1ihba_ 76 AGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154 (156)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 88888888888887775 7777888888888888888888888887776 45566777777777777777777777766
Q ss_pred h
Q 007858 202 K 202 (587)
Q Consensus 202 ~ 202 (587)
+
T Consensus 155 ~ 155 (156)
T d1ihba_ 155 N 155 (156)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.3e-24 Score=191.90 Aligned_cols=142 Identities=19% Similarity=0.163 Sum_probs=134.7
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
+|||+||..|+.++|++|+++| ++ ++.+|.+|.||||+|+ .|+.+++++|+++|+++ +.++..|.+|++.++..+
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g--~d-~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~ 77 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNN--VN-VNAQNGFGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG 77 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSC--CC-TTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CC-cCccCCcccccccccc-ccccccccccccccccc-ccccccCccccccccccc
Confidence 8999999999999999999999 89 9999999999999886 79999999999999995 899999999999999999
Q ss_pred ChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 160 QSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 160 ~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
+.+.++.|++.+. .+..+..|.++++.|+..++.++++.|+++ .+.+.+.+|.+|.||||+|+..++
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~d~~g~TpL~~A~~~~~ 145 (156)
T d1ihba_ 78 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDTACDLARLYGR 145 (156)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc-ccccccccCCCCCCHHHHHHHcCC
Confidence 9999999999998 888999999999999999999999999999 666889999999999999998875
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.7e-25 Score=218.74 Aligned_cols=195 Identities=15% Similarity=0.118 Sum_probs=118.7
Q ss_pred CCccccC-CCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCCh---HHHHHHhhcCCCCCCCCC
Q 007858 104 DNLLSLQ-DENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQS---KMASFLYRQNEDNLEPDD 179 (587)
Q Consensus 104 ~~ll~~~-d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~---~~v~~Ll~~~~~~~~~~~ 179 (587)
.+ ++.. |.+|+||||+||..|+.++|++|+++|+++ +.+|..|+||||.||..++. +.++.+++
T Consensus 97 ~d-vn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~---------- 164 (301)
T d1sw6a_ 97 LN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLD---------- 164 (301)
T ss_dssp CC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHH----------
T ss_pred CC-cCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CcCCcccccHHHHhhhcccchhhhhHHHHHH----------
Confidence 45 6654 899999999999999999999999999996 89999999999999987652 11111111
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHH
Q 007858 180 LENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELV 259 (587)
Q Consensus 180 g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 259 (587)
.+ ......+|..|+||||+++..+... .. ..... .-...++
T Consensus 165 ------------------~l-----~~~~~~~d~~g~t~lh~~~~~~~~~---~~--------~~~~~-----~~~~~~~ 205 (301)
T d1sw6a_ 165 ------------------YL-----YPCLILEDSMNRTILHHIIITSGMT---GC--------SAAAK-----YYLDILM 205 (301)
T ss_dssp ------------------HH-----GGGGGEECTTCCCHHHHHHHHHTST---TC--------HHHHH-----HHHHHHH
T ss_pred ------------------HH-----hhhhhhcccccCCHHHHHHHHhCcc---cc--------HHHHH-----HHHHHHH
Confidence 11 1223456777777877776544200 00 00000 0001223
Q ss_pred HHHHHHhhccchhhhhhhccCCChHHHHHHHcCcHHHHHH-----HHHhCCCccccccCCCCchHHHHHHcCChhHHHHH
Q 007858 260 KCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNFKFLAV-----LTRSYPDLVHQLDENGRSIFHIAVMHRHADTFKLI 334 (587)
Q Consensus 260 ~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~-----Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 334 (587)
+.+.+.+....... ...+.++++.+........+.. ++... ++.+|.+|+||||+|+++|+.+++++|
T Consensus 206 ~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---in~~D~~G~TpLh~A~~~g~~~iv~~L 278 (301)
T d1sw6a_ 206 GWIVKKQNRPIQSG----TNEKESKPNDKNGERKDSILENLDLKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDAL 278 (301)
T ss_dssp HHHHHGGGCCEEEC--------------------CHHHHHCSHHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHHhcCCcchhcc----cccccchhHHHHhcchHHHHHHHhhHHHHhcC---ccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 33334333222111 1233556665555544433332 23322 577899999999999999999999999
Q ss_pred HhcCcchhhhhhhccCCCCcHHHHHH
Q 007858 335 YEMGFDKELIATYVDVSGNNLLHLAA 360 (587)
Q Consensus 335 l~~g~~~~~~~~~~d~~G~TpLhlA~ 360 (587)
+++|++++ .+|++|.||||+|+
T Consensus 279 l~~GAd~~----~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 279 LDYGADPF----IANKSGLRPVDFGA 300 (301)
T ss_dssp HHTTCCTT----CCCTTSCCGGGGTC
T ss_pred HHCCCCCC----CCCCCCCCHHHHcC
Confidence 99999977 59999999999986
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=9.4e-24 Score=186.27 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=131.3
Q ss_pred CcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 007858 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158 (587)
Q Consensus 79 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~ 158 (587)
.+.||.||..|+.++|++|++.+ +.+ ++.+|..|+||||+|+ .|+.+++++|++++.++ +..+..|.+|++.++..
T Consensus 3 g~~L~~Aa~~g~~~~vk~lL~~~-~~~-~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~ 78 (156)
T d1bd8a_ 3 GDRLSGAAARGDVQEVRRLLHRE-LVH-PDALNRFGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT-CCC-TTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cHHHHHHHHcCCHHHHHHHHHhC-CCC-CCccCCCCCccccccc-ccccccccccccccccc-ccccccccccccccccc
Confidence 34599999999999999999975 477 9999999999999987 58999999999999996 88999999999999999
Q ss_pred CChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 159 GQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 159 g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
++.+++++++++++ .+..+.+|.||||.|+..|+.+++++|+ . +..++.+|.+|+||||+|+..++
T Consensus 79 ~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~--~~~~~~~d~~G~TpL~~A~~~g~ 145 (156)
T d1bd8a_ 79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-A--ESDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-T--TSCTTCCCTTSCCHHHHHHHSCC
T ss_pred ccccccccccccccccccccCCCCeeecccccccccccccccc-c--cccccccCCCCCCHHHHHHHcCC
Confidence 99999999999998 8889999999999999999999999777 4 56788899999999999999998
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=1.4e-24 Score=213.49 Aligned_cols=195 Identities=16% Similarity=0.074 Sum_probs=127.7
Q ss_pred CccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCH-------HHHHHHHhcCC
Q 007858 66 HQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSV-------EIAQFMLQRNP 138 (587)
Q Consensus 66 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~-------~iv~~Ll~~~~ 138 (587)
.+.+++...|.+|+||||+||..|+.++|++|+++| ++ ++.+|..|+||||.|+..++. ++++++.+
T Consensus 95 ~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~g--ad-~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~--- 168 (301)
T d1sw6a_ 95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG--SN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP--- 168 (301)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT--CC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---
T ss_pred cCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CC-CCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---
Confidence 445677666899999999999999999999999999 89 999999999999999987652 44554443
Q ss_pred cccccCCCCCCcHHHHHHHhCCh----HHHHHHhhcCCCCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccC
Q 007858 139 NLLTIRGGGQMTPLYIAALFGQS----KMASFLYRQNEDNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAK 214 (587)
Q Consensus 139 ~l~~~~~~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~ 214 (587)
. ...+|..|+||||+++..+.. +++++.+ ..++..+++. ...........
T Consensus 169 ~-~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~------------------------~~~~~~l~~~-~~~~~~~~~~~ 222 (301)
T d1sw6a_ 169 C-LILEDSMNRTILHHIIITSGMTGCSAAAKYYL------------------------DILMGWIVKK-QNRPIQSGTNE 222 (301)
T ss_dssp G-GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHH------------------------HHHHHHHHHG-GGCCEEEC---
T ss_pred h-hhhcccccCCHHHHHHHHhCccccHHHHHHHH------------------------HHHHHHHHhc-CCcchhccccc
Confidence 2 366789999999999866542 2222222 1233445554 33333444555
Q ss_pred CchHHHHHhhCCCCcccCCCCCccccchhhhhccCCCchHHHHHHHHHHHHhhccchhhhhhhccCCChHHHHHHHcCcH
Q 007858 215 YGTAMHMLARNPSAFTSNCPGWLKVPGIKFITNNTDSSTQALELVKCLWKEISKSTHKDVLKLISKPSKLLFDAAHSGNF 294 (587)
Q Consensus 215 g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ 294 (587)
+.++++.+...... .......+..++... ++. ++..|+||||+|++.|+.
T Consensus 223 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~--in~-----~D~~G~TpLh~A~~~g~~ 272 (301)
T d1sw6a_ 223 KESKPNDKNGERKD-----------------------SILENLDLKWIIANM--LNA-----QDSNGDTCLNIAARLGNI 272 (301)
T ss_dssp -------------C-----------------------HHHHHCSHHHHHHHT--TTC-----CCTTSCCHHHHHHHHCCH
T ss_pred ccchhHHHHhcchH-----------------------HHHHHHhhHHHHhcC--ccC-----CCCCCCCHHHHHHHcCCH
Confidence 56666655443320 000000011222221 232 345889999999999999
Q ss_pred HHHHHHHHhCCCccccccCCCCchHHHHH
Q 007858 295 KFLAVLTRSYPDLVHQLDENGRSIFHIAV 323 (587)
Q Consensus 295 ~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 323 (587)
+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 273 ~iv~~Ll~~GAd-~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 273 SIVDALLDYGAD-PFIANKSGLRPVDFGA 300 (301)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCGGGGTC
T ss_pred HHHHHHHHCCCC-CCCCCCCCCCHHHHcC
Confidence 999999999999 7999999999999986
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=2.8e-23 Score=182.43 Aligned_cols=149 Identities=17% Similarity=0.186 Sum_probs=137.3
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
.||||.||+.|+.++|+.|| +++++++ . |..|.||||+|+..++.++++.++... .. ....+..+.++++.++
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL--~~ga~~~-~-~~~g~t~L~~a~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 75 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILM--ANGAPFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRAG--VS-RDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHH--HHTCCCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTTT--CC-TTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHH--HcCCCcc-c-ccCCCcccccccccccccccccccccc--cc-cccccccccccccccc
Confidence 49999999999999999999 4566665 3 899999999999999999999999887 55 6677888899999999
Q ss_pred HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHH
Q 007858 123 AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQL 199 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~L 199 (587)
...+.++++++++++.+. ..+|.+|.||||+|+..|+.+++++|++.++ ++..|.+|.||||+|+.+|+.++++.|
T Consensus 76 ~~~~~~~~~~l~~~~~~~-~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 76 SEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccceeeecccccCCcc-ccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 999999999999999995 8899999999999999999999999999999 888999999999999999999999765
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=4.2e-23 Score=181.34 Aligned_cols=142 Identities=18% Similarity=0.137 Sum_probs=133.6
Q ss_pred CcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 007858 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158 (587)
Q Consensus 79 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~ 158 (587)
.||||.||+.|+.++|++|+++| ++ ++ .|..|.||||+|+..++.++++.++...... ...+..+.++++.++..
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~g--a~-~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANG--AP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT--CC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHcC--CC-cc-cccCCCccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 59999999999999999999999 66 55 6999999999999999999999999988875 77788899999999999
Q ss_pred CChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccccCCchHHHHHhhCCC
Q 007858 159 GQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKKNKKLLAGATHAKYGTAMHMLARNPS 227 (587)
Q Consensus 159 g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 227 (587)
.+.++++++++.+. .+..+.+|.||||+|+..|+.+++++|++. +.+++.+|.+|.||||+|+.+|+
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~--gad~~~~d~~g~Tpl~~A~~~g~ 145 (153)
T d1awcb_ 78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY--GADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ccceeeecccccCCccccccccCchHHHhhhhcchhheeeecccc--ccCCcccCCCCCCHHHHHHHcCC
Confidence 99999999999998 778999999999999999999999999997 88999999999999999999998
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.4e-23 Score=177.41 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=109.2
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCC-cHHH
Q 007858 41 HKCVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGN-TAFC 119 (587)
Q Consensus 41 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~-TpLh 119 (587)
.+.++||.|+..|+.++|+.|+ +++.+++.+ |.+|.||||.|+ .|+.+++++|+++| ++ ++.+|..|. ||||
T Consensus 2 p~~~~L~~Aa~~G~~~~v~~Ll--~~gad~n~~-~~~g~t~l~~a~-~g~~~~v~~Ll~~g--a~-~~~~~~~~~~~~L~ 74 (125)
T d1bi7b_ 2 PSADWLATAAARGRVEEVRALL--EAGANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHG--AE-PNCADPATLTRPVH 74 (125)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHH--TTTCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTT--CC-CCCCCTTTCCCHHH
T ss_pred CChhHHHHHHHCCCHHHHHHHH--HcCCccccc-cccccccccccc-cccccccccccccc--cc-cccccccccccccc
Confidence 3568899999999999999999 678899887 899999999765 69999999999998 88 888888775 6999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhh
Q 007858 120 FAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYR 169 (587)
Q Consensus 120 ~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (587)
+|++.|+.+++++|+++|+++ +.+|.+|.||||+|+++|+.+++++|++
T Consensus 75 ~A~~~g~~~~v~~Ll~~ga~~-~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 75 DAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccccccc-ccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999996 8999999999999999999999999975
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.87 E-value=1.2e-23 Score=175.84 Aligned_cols=107 Identities=19% Similarity=0.233 Sum_probs=93.0
Q ss_pred ChHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHH
Q 007858 43 CVPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAA 122 (587)
Q Consensus 43 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa 122 (587)
.|||++|++.|+.++|+.|+ +.+.+++.. +.+|.||||+|+..|+.+++++|++.| ++ ++.+|..|+||||+|+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll--~~g~d~n~~-~~~g~t~lh~A~~~~~~~~~~~ll~~g--~d-in~~d~~g~tpLh~A~ 76 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYV--AKGEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKG--AD-INAPDKHHITPLLSAV 76 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHH--TTTCCCCCC-SSSSCCTTHHHHHHSTTTHHHHHHHSS--CT-TTCCSSSCSCHHHHHH
T ss_pred ChHHHHHHHCCCHHHHHHHH--Hhhhccccc-ccccccccccccccccccccccccccc--ce-eeecccccccchhhhh
Confidence 37889999999999999998 567888877 888899999999999999999999888 88 8888888999999999
Q ss_pred HcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHH
Q 007858 123 AVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAA 156 (587)
Q Consensus 123 ~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~ 156 (587)
++|+.+++++|+++|+++ +.+|.+|.||||+|.
T Consensus 77 ~~~~~~~v~~Ll~~Gad~-~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 77 YEGHVSCVKLLLSKGADK-TVKGPDGLTALEATD 109 (118)
T ss_dssp TTTCCHHHHHHHTTCCCS-SSSSSSTCCCCCTCS
T ss_pred hcCchhhhhhhhcccccc-eeeCCCCCCHHHHHh
Confidence 999999999999999885 888889999988873
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.7e-22 Score=171.84 Aligned_cols=121 Identities=22% Similarity=0.278 Sum_probs=105.2
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHH
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAAVTKGYQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAA 123 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~ 123 (587)
++|+.|+..|+.++|+.|+ +++.+++.+ |.+|.||||+|+..|+.+++++|++.+ ++ ++.+|.+|+||||+|+.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll--~~g~d~n~~-d~~g~t~Lh~A~~~~~~~~~~~ll~~g--~~-~~~~d~~g~tpLh~A~~ 76 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRII--YEVDDPSLP-NDEGITALHNAVCAGHTEIVKFLVQFG--VN-VNAADSDGWTPLHCAAS 76 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHT--STTSSCCCC-CTTSCCHHHHHHHHTCHHHHHHHHHHT--CC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH--HcCCCcccc-ccccccccccccccccccccccccccc--cc-cccccccCcccccccch
Confidence 5789999999999999999 678888887 889999999999999999999999998 88 88999999999999999
Q ss_pred cCCHHHHHHHHhcCCcccccCC-CCCCcHHHHH--HHhCChHHHHHHhhcC
Q 007858 124 VGSVEIAQFMLQRNPNLLTIRG-GGQMTPLYIA--ALFGQSKMASFLYRQN 171 (587)
Q Consensus 124 ~g~~~iv~~Ll~~~~~l~~~~~-~~g~tpL~~A--~~~g~~~~v~~Ll~~~ 171 (587)
+|+.+++++|+++|+++ +..+ .+|.||++++ +..|+.+++++|++..
T Consensus 77 ~g~~~~v~~Ll~~ga~v-~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~ 126 (130)
T d1ycsb1 77 CNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 126 (130)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence 99999999999999996 5444 5688887765 5678899999998754
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.6e-22 Score=169.53 Aligned_cols=119 Identities=17% Similarity=0.119 Sum_probs=111.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCC-cHHHHHH
Q 007858 78 YQTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQM-TPLYIAA 156 (587)
Q Consensus 78 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~-tpL~~A~ 156 (587)
+.++||.|++.|+.++|++|+++| ++ ++.+|..|.||||+|+ .|+.+++++|+++|+++ +.++..|. ||||+|+
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~g--ad-~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~ 77 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAG--AN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 77 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTT--CC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcC--Cc-cccccccccccccccc-ccccccccccccccccc-cccccccccccccccc
Confidence 578999999999999999999998 88 9999999999999775 79999999999999996 77887765 6999999
Q ss_pred HhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHH
Q 007858 157 LFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLK 201 (587)
Q Consensus 157 ~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 201 (587)
+.|+.+++++|+++++ .+..|.+|.||||+|++.|+.+++++|+.
T Consensus 78 ~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 78 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999998 88899999999999999999999999874
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.86 E-value=3.2e-23 Score=173.14 Aligned_cols=105 Identities=19% Similarity=0.273 Sum_probs=97.6
Q ss_pred CcHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHh
Q 007858 79 QTILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALF 158 (587)
Q Consensus 79 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~ 158 (587)
+|||++|++.|+.++|++|+++| ++ ++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+.+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g--~d-~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~ 78 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKG--ED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYE 78 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTT--CC-CCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTT
T ss_pred ChHHHHHHHCCCHHHHHHHHHhh--hc-ccccccccccccccccccccccccccccccccee-eecccccccchhhhhhc
Confidence 58999999999999999999998 88 9999999999999999999999999999999996 89999999999999999
Q ss_pred CChHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 007858 159 GQSKMASFLYRQNE-DNLEPDDLENTFFVS 187 (587)
Q Consensus 159 g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a 187 (587)
|+.+++++|+++|+ ++..|.+|.||||+|
T Consensus 79 ~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a 108 (118)
T d1myoa_ 79 GHVSCVKLLLSKGADKTVKGPDGLTALEAT 108 (118)
T ss_dssp TCCHHHHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred CchhhhhhhhcccccceeeCCCCCCHHHHH
Confidence 99999999999988 777778888887766
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=4e-21 Score=167.64 Aligned_cols=123 Identities=20% Similarity=0.227 Sum_probs=109.2
Q ss_pred hHhHHHHHcCCHHHHHHHHhhcCccchhhh-----cCCCCCcHHHHHHhc---CCHHHHHHHHHccCCCCccccCCCCCC
Q 007858 44 VPLYKAALKGDCNEAKRILGDDHQSMLRAA-----VTKGYQTILHVATGA---KQTNFVKQMVELTGHDNLLSLQDENGN 115 (587)
Q Consensus 44 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-----~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~ll~~~d~~g~ 115 (587)
..|+.|++.+++..+..++ ..+.+++.. .+..|+||||+|++. |+.++|++|++.| ++ ++.+|.+|+
T Consensus 8 ~~L~~Av~~~dl~~l~~~~--~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--ad-in~~d~~g~ 82 (154)
T d1dcqa1 8 HSLCEAVKTRDIFGLLQAY--ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GN-LDKQTGKGS 82 (154)
T ss_dssp HHHHHHHHTTCHHHHHHHH--HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SC-TTCCCTTCC
T ss_pred HHHHHHHHhCCHHHHHHHH--HcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcC--CC-hhhhhhhhc
Confidence 3577899999999999998 444444322 266799999999974 6889999999999 88 999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhCChHHHHHHhhcCC
Q 007858 116 TAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFGQSKMASFLYRQNE 172 (587)
Q Consensus 116 TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (587)
||||+|++.|+.+++++|+++|+++ +.+|.+|.||||+|++.|+.+++++|++.++
T Consensus 83 TpLh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~ 138 (154)
T d1dcqa1 83 TALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALS 138 (154)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccCccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999999996 9999999999999999999999999999776
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.3e-21 Score=164.73 Aligned_cols=119 Identities=22% Similarity=0.257 Sum_probs=108.9
Q ss_pred cHHHHHHhcCCHHHHHHHHHccCCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHhC
Q 007858 80 TILHVATGAKQTNFVKQMVELTGHDNLLSLQDENGNTAFCFAAAVGSVEIAQFMLQRNPNLLTIRGGGQMTPLYIAALFG 159 (587)
Q Consensus 80 t~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~l~~~~~~~g~tpL~~A~~~g 159 (587)
++||.|+..|+.++|++|+++| ++ ++.+|.+|+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+.+|
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g--~d-~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g 78 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEV--DD-PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCN 78 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTT--SS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHcC--CC-cccccccccccccccccccccccccccccccccc-ccccccCcccccccchhh
Confidence 6899999999999999999999 89 9999999999999999999999999999999996 999999999999999999
Q ss_pred ChHHHHHHhhcCC-CCCCC-CCCchHHHHH--HHhCcHHHHHHHHHh
Q 007858 160 QSKMASFLYRQNE-DNLEP-DDLENTFFVS--IETGLYGLALQLLKK 202 (587)
Q Consensus 160 ~~~~v~~Ll~~~~-~~~~~-~~g~t~l~~a--~~~~~~~~v~~Ll~~ 202 (587)
+.+++++|+++++ ++..+ .++.|+++.+ ...|+.+++++|+..
T Consensus 79 ~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 79 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 9999999999998 66544 5678877665 577889999999976
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=4.2e-19 Score=154.66 Aligned_cols=118 Identities=19% Similarity=0.131 Sum_probs=107.3
Q ss_pred HHHHHHhcCCHHHHHHHHHccCCCCccc------cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCCCcH
Q 007858 81 ILHVATGAKQTNFVKQMVELTGHDNLLS------LQDENGNTAFCFAAAV---GSVEIAQFMLQRNPNLLTIRGGGQMTP 151 (587)
Q Consensus 81 ~Lh~A~~~g~~~iv~~Ll~~~~~~~ll~------~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~l~~~~~~~g~tp 151 (587)
.|+.|++.++...+..++..| .+ ++ ..+..|+||||+|++. |+.+++++|+++|+++ +.+|.+|.||
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g--~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~Tp 84 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADG--VD-LTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTA 84 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT--CC-TTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCH
T ss_pred HHHHHHHhCCHHHHHHHHHcC--CC-cCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhccc
Confidence 456888999999999999887 54 33 3477899999999985 6889999999999996 9999999999
Q ss_pred HHHHHHhCChHHHHHHhhcCC-CCCCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 007858 152 LYIAALFGQSKMASFLYRQNE-DNLEPDDLENTFFVSIETGLYGLALQLLKK 202 (587)
Q Consensus 152 L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 202 (587)
||+|+..|+.+++++|+++++ .+..|.+|.||||+|++.|+.++++.|++.
T Consensus 85 Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~ 136 (154)
T d1dcqa1 85 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136 (154)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999999999 889999999999999999999999999987
|